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Homologs of SF3001 gene of NC_004337_P1

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) yeeW
( - )

NC_011745
(Escherichia coli ED1a)

1e-93

91.4

2) ECH74115_5038
( - )

NC_011353
(Escherichia coli EC4115)

1e-81

3) join
( - )

NC_017626
(Escherichia coli 042)

5e-78

91.6

• Sequence Alignments

1) yeeW in NC_011745


>NC_004337_P1|39|G35|24114265|NP_708775.1|Shigella_flexneri_2a_str._301|+|45533..45730|-|SF3001|hypothetical 
          Length = 198

 Score = 340 bits (877), Expect = 1e-93
 Identities = 181/198 (91%)
 Strand = Plus / Plus

Query: 1   atgaaatcattaaccacggaaacagcgctggatattctgattacgtggctgcaggacaat 60
           ||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1   atgaaattattaaccacagaaacggcgctggatattctgattgcgtggctgcaggacaat 60

Query: 61  atcgactgcgaatcgggaattatcttcgacaacgatgaggataaaactgattcggcagca 120
           || ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  attgactgcgaatcagggattatcttcgacaacgatgaggataaaacggattcggcagca 120

Query: 121 ctgttgccttgtatcgaacaggccagggagggtatccgtaccctgcgccaactgcagctt 180
           ||| |||| ||||| |||||||||||||| | ||||||||||||||| || |||||| ||
Sbjct: 121 ctgctgccctgtattgaacaggccagggaagatatccgtaccctgcgtcagctgcagttt 180

Query: 181 ctgcaccagaaccggtga 198
           ||||| ||||||||||||
Sbjct: 181 ctgcaacagaaccggtga 198

2) ECH74115_5038 in NC_011353


>NC_004337_P1|39|G35|24114265|NP_708775.1|Shigella_flexneri_2a_str._301|+|45533..45730|-|SF3001|hypothetical 
          Length = 198

 Score = 300 bits (775), Expect = 1e-81
 Identities = 159/171 (93%)
 Strand = Plus / Plus

Query: 28  ctggatattctgattgcgtggctgcaggacaatatcgacagcgaatccggaattatcttc 87
           ||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||
Sbjct: 28  ctggatattctgattgcgtggctgcaggacaatattgactgcgaatcagggattatcttc 87

Query: 88  gacaacgatgaggataaaacggattcggcagcattgttgccctgtatcgaacaggtcagg 147
           ||||||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||
Sbjct: 88  gacaacgatgaggataaaacggattcggcagcactgctgccctgtattgaacaggccagg 147

Query: 148 gaagatgtccgtaccctgcgccaactgcagcttctgcaacagaaccggtga 198
           |||||| ||||||||||||| || |||||| ||||||||||||||||||||
Sbjct: 148 gaagatatccgtaccctgcgtcagctgcagtttctgcaacagaaccggtga 198

3) join in NC_017626


>NC_004337_P1|39|G35|24114265|NP_708775.1|Shigella_flexneri_2a_str._301|+|45533..45730|-|SF3001|hypothetical 
          Length = 198

 Score = 288 bits (744), Expect = 5e-78
 Identities = 153/167 (92%)
 Strand = Plus / Plus

Query: 1   atgaaatcattaaccacggaaacagcgctggatattctgattacgtggctgcaggacaat 60
           ||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1   atgaaattattaaccacagaaacggcgctggatattctgattgcgtggctgcaggacaat 60

Query: 61  atcgactgcgaatcgggaattatcttcgacaacgatgaggataaaacaggttcggcagca 120
           || ||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 61  attgactgcgaatcagggattatcttcgacaacgatgaggataaaacggattcggcagca 120

Query: 121 ctgttgcgctgtatcgaacaggccagggagggtatccgtaccctgcg 167
           ||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 121 ctgctgccctgtattgaacaggccagggaagatatccgtaccctgcg 167