> EF611302|39|G39|148807428|ABR13501.1|Pseudomonas_aeruginosa_PSE9|+|32314..33999|-|-|site-specific
DNA methylase
Length=561
Score = 379 bits (1423), Expect = 3e-106, Method: Compositional matrix adjust.
Identities = 242/457 (53%), Positives = 337/457 (74%), Gaps = 16/457 (3%)
Query 1 MYKRTINHFHLFCGLGGGAKGFNMGQAKVGQVEAEFRCIGGIDSDAAAIQDFNQLAGAKG 60
M KRT+ HFH+ CGLGGGAKGFN ++++VG+VEA+ C+GGID DA+ ++DF +LAG G
Sbjct 1 MLKRTLYHFHFCCGLGGGAKGFNRSRPRVGNVEAHWECLGGIDVDAGVLRDFAKLAGVPG 60
Query 61 TVMDLFDASQYLDWHGHLPPEDWKEATPEDIRRAAGYERPNIVFTSPPCKGFSGLLSQTK 120
T +DLF QY+ HG PP DW+EATPEDIRRAAG RP+ VF S+PCKG SGLLS+ K
Sbjct 61 TQLDLFTRDQYIRFHGKEPPADWREATPEDIRRAAGGKRPDCVFISSPCKGASGLLSEEK 120
Query 121 SGTDKYQALNRLTTRGIKLALEAWQDDPVEFFILENVPRIATRGRYLIDEIIELLESHGY 180
+ T +YQALN LT R I L EAW DDPV ++ +ENVPR+ATRGR L+D+I +LL G+
Sbjct 121 AKTPRYQALNELTLRCIWLMGEAWADDPVPLIAFENVPRLATRGRHLLDQIGQLLGHYGF 180
Query 181 AVAETTHDCGEIGGLAQSRKRFLLVARHQEKIPPFLYEPETKSLKKVGDILENLPMPGD- 239
A AETTHDCGE+GGLAQSRKRFLLVAR+ EK+P+FLYEPE KSL+ VGDIL +P+PGD
Sbjct 181 ANAETTHDCGELGGLAQSRKRFLLVARNIEKVPAFLYEPEKKSLRAVGDILGRMPLPGDI 240
Query 240 ESAGPMHRIPNLQWKTWVRLAFVEAGKDWRSLQNLNVQNGFLTDFGIMPNEQYHNSVYGV 299
E+AGPMHR+P+LQW+TWVRLA+V AG DWRSL++L +++G L D+ I+P +Y+++ GV
Sbjct 241 EAAGPMHRVPSLQWRTWVRLALVRAGSDWRSLNELAIEDGHLRDLVIVP--EYRSGYMGV 298
Query 300 KKWEEPTGTVAVRSTPSNGAYSVADPR------WAGTHKFGQLGVRNFNETsgavsgqsa 353
W++ +GT+A RS P+NGA+SVADPR W ++F GV E++ +++GQ++
Sbjct 299 HGWDDTAGTIAGRSGPTNGAFSVADPRYRQASNWNHGQQF---GVIRWAESAPTIPGQTT 355
Query 354 vgggRYAIADPRINGERHKNVFKVVQMKGHSPTVTS-GTGPTAGGLTIADPRMPDTNKNR 412
G G +++ADPR N +RH ++V++ + T+ + G G +G ++ADPR+ + K
Sbjct 356 PGQGTFSVADPRPNWNRHSGNYRVIRYDQPAGTIIAGGKGVQGGQQSVADPRILHRGKGD 415
Query 413 H---NGFYRVVDFNGQAHTVTGAKHVAGTAMSVADPR 446
+ G Y V++FN ++ +++++ + + SVADPR
Sbjct 416 NYLTGGHYGVIGFNQHSGAIAASSRYDSGRFSVADPR 452
Score = 146 bits (536), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/260 (46%), Positives = 173/260 (67%), Gaps = 13/260 (5%)
Query 386 TVTSGTGPTAGGLTIADPRMPDTNKNRHNGFYRVVDFNGQAHTVTGAKHVAGTAMSVADP 445
T+++ +GPT G++++ADPR ++++ H + V+ A T+ G + + SVADP
Sbjct 307 TIAGRSGPTNGAFSVADPRYRQASNWNHGQQFGVIRWAESAPTIPGQTTPGQGTFSVADP 366
Query 446 RGG--KFGGKYSVTDFDKHAKTVISGSTTGQGAF-AVADPRPGLGKDGNREHYQTAGHYG 502
R + +G+Y V +D+ A T+I+G+ QG+ +VADPR + G+ ++Y T+GHYG
Sbjct 367 RPNWNRHSGNYRVIRYDQPAGTIIAGGKGVQGGQQSVADPR--ILHRGKGDNYLTGGHYG 424
Query 503 VRPWDSHSYAVPGKAKLDRGHWSVADPRIQDAENSTLPSEKDKGAFIIQSLDNTWHRPFT 562
V + HS A+++ ++ D G+ SVADPRI P+ ++ + II+SLD TWHRPFT
Sbjct 425 VIGFNQHSGAIAASSRYDSGRFSVADPRI--------PAADERLTCIIRSLDGTWHRPFT 476
Query 563 TLELAALQGLVDPEEFLHLFGGSDSAWRERIGNavpaptaaaiaSVMGQTILLAEAGETF 622
TLE AALQ+LV+PEE+L L G SD W ERIGNAVP+ +A AIA VMG T+LLAE GETF
Sbjct 477 TLEKAALQSLVEPEEYLVLDGMSDKDWSERIGNAVPPHAAEAIADVMGTTLLLAEQGETF 536
Query 623 MLSAMPIWVQPLVVSASVEN 642
LS PIWV+ + V+ SV +
Sbjct 537 RLSKTPIWVRNVAVALSVSQ 556
Score = 33.0 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/76 (36%), Positives = 47/76 (62%), Gaps = 5/76 (6%)
Query 455 SVTDFDKHAKTVISGSTTGQGAFAVADPRPGLGKDGNREHYQTAGHYGVRPWDSHSYAVP 514
+V + D A T+ + S +GAF+VADPR + +N++H + ++GV W + ++P
Sbjct 297 GVHGWDDTAGTIAGRSGPTNGAFSVADPR--YRQASNWNH---GQQFGVIRWAESAPTIP 351
Query 515 GKAKLDRGHWSVADPR 530
G++ ++G SVADPR
Sbjct 352 GQTTPGQGTFSVADPR 367
Score = 26.9 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/97 (32%), Positives = 58/97 (60%), Gaps = 7/97 (7%)
Query 293 HNSVYGVKKWEEPTGTV-AVRSTPSNGAYSVADPR---WAGTHKF---GQLGVRNFNETs 345
H++ Y V + ++P+GT+ A G SVADPR ++ +++ G+ GV FN+ S
Sbjct 373 HSGNYRVIRYDQPAGTIIAGGKGVQGGQQSVADPRILHRGKGDNYLTGGHYGVIGFNQHS 432
Query 346 gavsgqsavgggRYAIADPRINGERHKNVFKVVQMKG 382
GA+++ S ++GR+++ADPRI + ++ + + G
Sbjct 433 GAIAASSRYDSGRFSVADPRIPAADERLTCIIRSLDG 469 |