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Homologs of SAPIG0065 gene of NC_017333_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAPIG0065
( YP_005732875.1 )

copper P-type ATPase AtkB

NC_017333
(Staphylococcus aureus ST398)

2e-18

100

2) PFC_02800
( YP_006491811.1 )

copper-transporting atpase, p-type

NC_018092
(Pyrococcus furiosus COM1)

5e-08

3) PF0731
( NP_578460.1 )

copper-transporting atpase, p-type

NC_003413
(Pyrococcus furiosus DSM 3638)

5e-08

4) SVI_3090
( YP_003557839.1 )

hypothetical protein

NC_014012
(Shewanella violacea DSS12)

0.042

5) SVI_3091
( YP_003557840.1 )

hypothetical protein

NC_014012
(Shewanella violacea DSS12)

0.042

6) SVI_3092
( YP_003557841.1 )

hypothetical protein

NC_014012
(Shewanella violacea DSS12)

0.042

7) DKAM_0515
( YP_002428208.1 )

Cation transporting ATPase (E1-E2 family) protein

NC_011766
(Desulfurococcus kamchatkensis 1221n)

0.16

8) SSU05_1384
( YP_001198750.1 )

cation transport ATPase

NC_009442
(Streptococcus suis 05ZYH33)

0.60

• Sequence Alignments

1) SAPIG0065 in NC_017333


> NC_017333_R1|38|G38|387601354|YP_005732875.1|Staphylococcus_aureus_subsp._aureus_ST398|+|36904..37074|-|SAPIG0065|copper 
P-type ATPase AtkB
Length=56

 Score = 86.0 bits (307),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 56/56 (100%), Positives = 56/56 (100%), Gaps = 0/56 (0%)

Query  1   MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTLKLK  56
           MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTLKLK
Sbjct  1   MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTLKLK  56

2) PFC_02800 in NC_018092


> NC_017333_R1|38|G38|387601354|YP_005732875.1|Staphylococcus_aureus_subsp._aureus_ST398|+|36904..37074|-|SAPIG0065|copper 
P-type ATPase AtkB
Length=56

 Score = 51.3 bits (175),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 43/50 (86%), Gaps = 0/50 (0%)

Query  1   MVQNLAWATGYNSFAIPLAAGALYSYGILLSPALGALLMSMSTVIVAINA  50
           MVQNL W++GYN  A+PLAAG L   G++LSPA+GA+LMS+STVIVAINA
Sbjct  1   MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINA  50

3) PF0731 in NC_003413


> NC_017333_R1|38|G38|387601354|YP_005732875.1|Staphylococcus_aureus_subsp._aureus_ST398|+|36904..37074|-|SAPIG0065|copper 
P-type ATPase AtkB
Length=56

 Score = 51.3 bits (175),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 43/50 (86%), Gaps = 0/50 (0%)

Query  1   MVQNLAWATGYNSFAIPLAAGALYSYGILLSPALGALLMSMSTVIVAINA  50
           MVQNL W++GYN  A+PLAAG L   G++LSPA+GA+LMS+STVIVAINA
Sbjct  1   MVQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINA  50

4) SVI_3090 in NC_014012


> NC_017333_R1|38|G38|387601354|YP_005732875.1|Staphylococcus_aureus_subsp._aureus_ST398|+|36904..37074|-|SAPIG0065|copper 
P-type ATPase AtkB
Length=56

 Score = 31.4 bits (99),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 19/45 (43%), Positives = 34/45 (76%), Gaps = 1/45 (2%)

Query  5   YNSLGIPVAAGVLFPLTGILLSPVIAGAAMALSSLTVVTNANRLR  49
           YN +++P+AAG+L ++ G++LSP I++  M+LS++ V  NA  L+
Sbjct  11  YNIVAVPLAAGIL-AFIGLILSPAIGAILMSLSTVIVAINAFTLK  54

5) SVI_3091 in NC_014012


> NC_017333_R1|38|G38|387601354|YP_005732875.1|Staphylococcus_aureus_subsp._aureus_ST398|+|36904..37074|-|SAPIG0065|copper 
P-type ATPase AtkB
Length=56

 Score = 31.4 bits (99),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 19/45 (43%), Positives = 34/45 (76%), Gaps = 1/45 (2%)

Query  5   YNSLGIPVAAGVLFPLTGILLSPVIAGAAMALSSLTVVTNANRLR  49
           YN +++P+AAG+L ++ G++LSP I++  M+LS++ V  NA  L+
Sbjct  11  YNIVAVPLAAGIL-AFIGLILSPAIGAILMSLSTVIVAINAFTLK  54

6) SVI_3092 in NC_014012


> NC_017333_R1|38|G38|387601354|YP_005732875.1|Staphylococcus_aureus_subsp._aureus_ST398|+|36904..37074|-|SAPIG0065|copper 
P-type ATPase AtkB
Length=56

 Score = 31.4 bits (99),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 19/45 (43%), Positives = 34/45 (76%), Gaps = 1/45 (2%)

Query  5   YNSLGIPVAAGVLFPLTGILLSPVIAGAAMALSSLTVVTNANRLR  49
           YN +++P+AAG+L ++ G++LSP I++  M+LS++ V  NA  L+
Sbjct  11  YNIVAVPLAAGIL-AFIGLILSPAIGAILMSLSTVIVAINAFTLK  54

7) DKAM_0515 in NC_011766


> NC_017333_R1|38|G38|387601354|YP_005732875.1|Staphylococcus_aureus_subsp._aureus_ST398|+|36904..37074|-|SAPIG0065|copper 
P-type ATPase AtkB
Length=56

 Score = 29.5 bits (92),  Expect = 0.16, Method: Compositional matrix adjust.
 Identities = 22/52 (43%), Positives = 35/52 (68%), Gaps = 0/52 (0%)

Query  13  IENLLWSFIYNILLIPVVAGILYGYGVYRGPEYAAIPMILSGISVASNSITV  64
           ++NL W+  YNI+ +P+ AGIL   G+  +P  +AI M LS + VA N++T+
Sbjct  2   VQNLWWGAGYNIVAVPLAAGILAFIGLILSPAIGAILMSLSTVIVAINAFTL  53

8) SSU05_1384 in NC_009442


> NC_017333_R1|38|G38|387601354|YP_005732875.1|Staphylococcus_aureus_subsp._aureus_ST398|+|36904..37074|-|SAPIG0065|copper 
P-type ATPase AtkB
Length=56

 Score = 27.7 bits (85),  Expect = 0.60, Method: Compositional matrix adjust.
 Identities = 18/43 (42%), Positives = 33/43 (77%), Gaps = 1/43 (2%)

Query  1   MIGIPIAMGLLHAFGGPLLNPMFAGAAMALSSVSVVLNALRLK  43
           ++++P+A G+L AF G +L+P +++  M+LS+V V +NA+ LK
Sbjct  13  IVAVPLAAGIL-AFIGLILSPAIGAILMSLSTVIVAINAFTLK  54