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Homologs of APECO1_3498 gene of NC_008563_P4

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) p1ECUMN_0017
( - )

NC_011749
(Escherichia coli UMN026)

e-169

95.7

2) EC042_pAA156
( - )

NC_017627
(Escherichia coli 042)

e-161

94.8

3) EC042_pAA006
( - )

NC_017627
(Escherichia coli 042)

e-159

94.1

4) EC042_4578
( - )

NC_017626
(Escherichia coli 042)

e-155

5) ECO103_3579
( - )

NC_013353
(Escherichia coli 12009)

e-147

94.8

6) ECO103_4899
( - )

NC_013353
(Escherichia coli 12009)

e-147

94.8

7) unnamed
( - )

NC_013353
(Escherichia coli 12009)

e-147

94.8

8) unnamed
( - )

NC_013353
(Escherichia coli 12009)

e-147

94.8

9) unnamed
( - )

NC_007608
(Shigella boydii Sb227)

e-126

95.5

10) ECO26_p1-48
( - )

NC_013369
(Escherichia coli 11368)

e-118

94.6

11) ECO111_0804
( - )

NC_013364
(Escherichia coli 11128)

e-116

93.8

• Sequence Alignments

1) p1ECUMN_0017 in NC_011749


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 591 bits (1525), Expect = e-169
 Identities = 309/323 (96%)
 Strand = Plus / Plus

Query: 1   atgactaaaaatactcgtttttcccccgaagtccgtcaacgggcagtccgtatggttctg 60
           ||||||||||| || | |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1   atgactaaaaaaacacttttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60

Query: 61  gaaagtcagggcgaatatgactcacaatgggcgacaatttgttccattgccccaaagatt 120
           ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
Sbjct: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattgctccaaagact 120

Query: 121 ggctgtacaccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 180
           |||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagtatgagcgggataccggaggc 180

Query: 181 ggtgatggcgggctcaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgatggtgggcttaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 241 cgtgaactgcgccgcagtaacgatatccttcgccaggcttccgcttattttgcgaaggcg 300
           |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgaactgcaccgcagtaacaatatccttcgccaggcttccgcttattttgcgaaggcg 300

Query: 301 gagttcgaccgcctctggaaaaa 323
           |||||||||||||||||||||||
Sbjct: 301 gagttcgaccgcctctggaaaaa 323

2) EC042_pAA156 in NC_017627


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 564 bits (1455), Expect = e-161
 Identities = 293/309 (95%)
 Strand = Plus / Plus

Query: 1   ttttcccccgaagtccgtcagcgggcgattcgtatggttctggaaagtcaggatgaatat 60
           |||||||||||||||||||| |||||  ||||||||||||||||||||||||  ||||||
Sbjct: 19  ttttcccccgaagtccgtcaacgggcagttcgtatggttctggaaagtcagggcgaatat 78

Query: 61  gactcacagtgggcggcaatttgttccattgccccaaagattggctgtacgccggagact 120
           |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 79  gactcacaatgggcggcaatttgttccattgctccaaagactggctgtacgccggagact 138

Query: 121 ctgcgtgtctgggttcgccagcatgagcgggataccgggggcggtgatggtgggctcacc 180
           ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||
Sbjct: 139 ctgcgtgtctgggttcgccagtatgagcgggataccggaggcggtgatggtgggcttacc 198

Query: 181 agcgctgaacgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcgccgcagt 240
           | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 199 accgctgaacgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcaccgcagt 258

Query: 241 aacgatattcttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctgg 300
           ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aacaatatccttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctgg 318

Query: 301 aaaaaatga 309
           ||||||| |
Sbjct: 319 aaaaaataa 327

3) EC042_pAA006 in NC_017627


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 557 bits (1436), Expect = e-159
 Identities = 290/309 (94%)
 Strand = Plus / Plus

Query: 18  ttttcccccgaagtccgtcagagggcgattcgtatggttctggaaagtcagggcgaatat 77
           ||||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||
Sbjct: 19  ttttcccccgaagtccgtcaacgggcagttcgtatggttctggaaagtcagggcgaatat 78

Query: 78  gactcacaatgggcggtaatttgttccattgccccaaagattggctgtacaccggagact 137
           |||||||||||||||| ||||||||||||||| ||||||| ||||||||| |||||||||
Sbjct: 79  gactcacaatgggcggcaatttgttccattgctccaaagactggctgtacgccggagact 138

Query: 138 ctgcgtgtctgggttcgccagcatgagcgggataccgggggcggtgatggcgggctcacc 197
           ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| |||
Sbjct: 139 ctgcgtgtctgggttcgccagtatgagcgggataccggaggcggtgatggtgggcttacc 198

Query: 198 actgctgaacgtcagcgtctgaaagagctggagcgtgaaaatcgtgaactgcgccgcagt 257
           || ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 199 accgctgaacgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcaccgcagt 258

Query: 258 aacgatatccttcgccaggcttccgcttattttgcgaaggcgaggttcgaccgcctctgg 317
           ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 259 aacaatatccttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctgg 318

Query: 318 aaaaaatga 326
           ||||||| |
Sbjct: 319 aaaaaataa 327


 Score = 21 bits (54), Expect = 2e+03
 Identities = 11/11 (100%)
 Strand = Plus / Plus

Query: 1  atgactaaaaa 11
          |||||||||||
Sbjct: 1  atgactaaaaa 11

4) EC042_4578 in NC_017626


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 545 bits (1407), Expect = e-155
 Identities = 297/324 (92%)
 Strand = Plus / Plus

Query: 1   atgactaaaaatactcgtttttcccccgaagttcgtcatagggtgatacgtatagttctg 60
           ||||||||||| || | ||||||||||||||| |||||  |||   | ||||| ||||||
Sbjct: 1   atgactaaaaaaacacttttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60

Query: 61  gaaagtcagg-cgaatatgactcacaatgggcggtagtttgttccattgccccaaagatt 119
           |||||||||| ||||||||||||||||||||||| | ||||||||||||| ||||||| |
Sbjct: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattgctccaaagact 120

Query: 120 ggctgtacgccagagaccctgcgtgtctgggttcgccagcatgagcgggataccaggggc 179
           ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| | |||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagtatgagcgggataccggaggc 180

Query: 180 ggtgatggagggctcaccaccgctgaacgtcagcgtctgaaagagctggagcgtgaaaat 239
           |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 ggtgatggtgggcttaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 240 cgtgaactgcgccgcagtagcgatatccttcgccaggcttccgcttattttgcgaaggcg 299
           |||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgaactgcaccgcagtaacaatatccttcgccaggcttccgcttattttgcgaaggcg 300

Query: 300 gagttcgaccgcctctggaaaaaa 323
           ||||||||||||||||||||||||
Sbjct: 301 gagttcgaccgcctctggaaaaaa 324

5) unnamed in NC_013353


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 519 bits (1340), Expect = e-147
 Identities = 273/288 (95%)
 Strand = Plus / Plus

Query: 55  atgactaaaaatacacgtttttcccccgaagtccgtcaacgggcagttcgtatggttctg 114
           ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgactaaaaaaacacttttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60

Query: 115 gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattaccccaaagatt 174
           |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattgctccaaagact 120

Query: 175 ggctgtacgccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 234
           |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagtatgagcgggataccggaggc 180

Query: 235 ggtgatggtgggctcaccaccactgaacgtcagcctctgaaagagctggagcgtaaaaat 294
           |||||||||||||| |||||| |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 181 ggtgatggtgggcttaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 295 cgtgaactgcgccgcagtaacgatatccttcgccagacttccgcttat 342
           |||||||||| |||||||||| |||||||||||||| |||||||||||
Sbjct: 241 cgtgaactgcaccgcagtaacaatatccttcgccaggcttccgcttat 288

6) ECO103_3579 in NC_013353


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 519 bits (1340), Expect = e-147
 Identities = 273/288 (95%)
 Strand = Plus / Plus

Query: 1   atgactaaaaatacacgtttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60
           ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgactaaaaaaacacttttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60

Query: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattaccccaaagatt 120
           |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattgctccaaagact 120

Query: 121 ggctgtacgccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 180
           |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagtatgagcgggataccggaggc 180

Query: 181 ggtgatggtgggctcaccaccactgaacgtcagcctctgaaagagctggagcgtaaaaat 240
           |||||||||||||| |||||| |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 181 ggtgatggtgggcttaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 241 cgtgaactgcgccgcagtaacgatatccttcgccagacttccgcttat 288
           |||||||||| |||||||||| |||||||||||||| |||||||||||
Sbjct: 241 cgtgaactgcaccgcagtaacaatatccttcgccaggcttccgcttat 288

7) ECO103_4899 in NC_013353


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 519 bits (1340), Expect = e-147
 Identities = 273/288 (95%)
 Strand = Plus / Plus

Query: 1   atgactaaaaatacacgtttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60
           ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgactaaaaaaacacttttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60

Query: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattaccccaaagatt 120
           |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattgctccaaagact 120

Query: 121 ggctgtacgccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 180
           |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagtatgagcgggataccggaggc 180

Query: 181 ggtgatggtgggctcaccaccactgaacgtcagcctctgaaagagctggagcgtaaaaat 240
           |||||||||||||| |||||| |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 181 ggtgatggtgggcttaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 241 cgtgaactgcgccgcagtaacgatatccttcgccagacttccgcttat 288
           |||||||||| |||||||||| |||||||||||||| |||||||||||
Sbjct: 241 cgtgaactgcaccgcagtaacaatatccttcgccaggcttccgcttat 288

8) unnamed in NC_013353


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 519 bits (1340), Expect = e-147
 Identities = 273/288 (95%)
 Strand = Plus / Plus

Query: 55  atgactaaaaatacacgtttttcccccgaagtccgtcaacgggcagttcgtatggttctg 114
           ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgactaaaaaaacacttttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60

Query: 115 gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattaccccaaagatt 174
           |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattgctccaaagact 120

Query: 175 ggctgtacgccggagactctgcgtgtctgggtacgccagcatgagcgggataccggaggc 234
           |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagtatgagcgggataccggaggc 180

Query: 235 ggtgatggtgggctcaccaccactgaacgtcagcctctgaaagagctggagcgtaaaaat 294
           |||||||||||||| |||||| |||||||||||| ||||||||||||||| ||| |||||
Sbjct: 181 ggtgatggtgggcttaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 295 cgtgaactgcgccgcagtaacgatatccttcgccagacttccgcttat 342
           |||||||||| |||||||||| |||||||||||||| |||||||||||
Sbjct: 241 cgtgaactgcaccgcagtaacaatatccttcgccaggcttccgcttat 288

9) unnamed in NC_007608


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 450 bits (1160), Expect = e-126
 Identities = 236/247 (96%)
 Strand = Plus / Plus

Query: 55  atgactaaaaatactcgtttttcccccgaagtccgtcaacgggcagtccgtatggttctg 114
           ||||||||||| || | |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1   atgactaaaaaaacacttttttcccccgaagtccgtcaacgggcagttcgtatggttctg 60

Query: 115 gaaagtcagggcgaatatgactcacaatgggcgacaatttgttccattgctccaaagatt 174
           ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 61  gaaagtcagggcgaatatgactcacaatgggcggcaatttgttccattgctccaaagact 120

Query: 175 ggctgtacgccggagactctgcgtgtctgggttcgccagcatgagcgggataccgggggc 234
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 121 ggctgtacgccggagactctgcgtgtctgggttcgccagtatgagcgggataccggaggc 180

Query: 235 ggtgatggagggctcaccaccgctgaacgtcagcgtctgaaagagctggagcgtgaaaat 294
           |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 ggtgatggtgggcttaccaccgctgaacgtcagcgtctgaaagagctggaacgtgaaaat 240

Query: 295 cgtgaac 301
           |||||||
Sbjct: 241 cgtgaac 247

10) ECO26_p1-48 in NC_013369


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 422 bits (1089), Expect = e-118
 Identities = 227/241 (94%)
 Strand = Plus / Plus

Query: 1   atgggcggcaatttgttccattgc-ccaaagattggctgtacaccggagactctgcgtgt 59
           |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||
Sbjct: 87  atgggcggcaatttgttccattgctccaaagactggctgtacgccggagactctgcgtgt 146

Query: 60  ctggggacgccagcatgagcgggataccgggagcggtgatggtgggctcaccagcgctga 119
           |||||  |||||| ||||||||||||||||  |||||||||||||||| |||| ||||||
Sbjct: 147 ctgggttcgccagtatgagcgggataccggaggcggtgatggtgggcttaccaccgctga 206

Query: 120 acgtcagcgtctgaaagagctggaacgtgaaaaccgtgaactgcgccgcagtaacgatat 179
           ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||
Sbjct: 207 acgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcaccgcagtaacaatat 266

Query: 180 ccttcgccaggcttccgcttattttgcgaaggccgagttcgaccgcctctggaaaaaata 239
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 267 ccttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctggaaaaaata 326

Query: 240 a 240
           |
Sbjct: 327 a 327

11) ECO111_0804 in NC_013364


>NC_008563_P4|38|G37|117625230|YP_854313.1|Escherichia_coli_APEC_O1|-|37680..38006|-|APECO1_3498|transposase; 
          Length = 327

 Score = 416 bits (1072), Expect = e-116
 Identities = 225/241 (93%)
 Strand = Plus / Plus

Query: 1   atgggcggcaatttgttccattgc-ccaaagattggctgtacaccggagactctgcgtgt 59
           |||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||
Sbjct: 87  atgggcggcaatttgttccattgctccaaagactggctgtacgccggagactctgcgtgt 146

Query: 60  ctggggacgcctgcatgagagggataccgggagcggtgatggtgggctcaccagcgctga 119
           |||||  |||| | ||||| ||||||||||  |||||||||||||||| |||| ||||||
Sbjct: 147 ctgggttcgccagtatgagcgggataccggaggcggtgatggtgggcttaccaccgctga 206

Query: 120 acgtcagcgtctgaaagagctggaacgtgaaaaccgtgaactgcgccgcagtaacgatat 179
           ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||
Sbjct: 207 acgtcagcgtctgaaagagctggaacgtgaaaatcgtgaactgcaccgcagtaacaatat 266

Query: 180 ccttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctggaaaaaatg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 267 ccttcgccaggcttccgcttattttgcgaaggcggagttcgaccgcctctggaaaaaata 326

Query: 240 a 240
           |
Sbjct: 327 a 327