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Homologs of APECO1_1082 gene of NC_008563_P3

DNA-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) unnamed
( - )

NC_017626
(Escherichia coli 042)

e-262

98.5

2) unnamed
( - )

NC_017626
(Escherichia coli 042)

e-250

97.2

3) EC042_2236
( - )

NC_017626
(Escherichia coli 042)

e-224

98.5

• Sequence Alignments

1) unnamed in NC_017626


>NC_008563_P3|38|G34|117624189|YP_853102.1|Escherichia_coli_APEC_O1|-|57098..57592|-|APECO1_1082|hypothetical 
          Length = 495

 Score = 899 bits (2320), Expect = e-262
 Identities = 466/475 (98%)
 Strand = Plus / Minus

Query: 1   ccttcctgcagcccccctccctgctgtataccccggtaccacaacgcgggcagcactttt 60
           || ||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 473 ccctcctgc--cccccctccctgctgtataccccggtaccacaactcgggcagcactttt 416

Query: 61  ctccttcataatcttcgtcacacatcacacaaaaccactttctcaccttcaccgtataat 120
           | || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ccccctcataattttcgtcacacatcacacaaaaccactttctcaccttcaccgtataat 356

Query: 121 ccggaaccgtcataccctgcagatgcaaacgacgggcctctttctctgccgggtcaagcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccggaaccgtcataccctgcagatgcaaacgacgggcctctttctctgccgggtcaagcc 296

Query: 181 aggtgcatcgcagcaggattttctcagcgacagtcatctggtcatgttcaaaccacggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aggtgcatcgcagcaggattttctcagcgacagtcatctggtcatgttcaaaccacggtg 236

Query: 241 gttgtccgtcattgccccgctgaagtgttaacgggcatccacaggacacacagcacaaaa 300
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 235 gttgtccgtcattgccccgctgaagtgttaatgggcatccacaggacacacagcacaaaa 176

Query: 301 cgtcctggcggttgtgcttcgctgcttctttcgccgtaacaaaatggcctttgctgtcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 cgtcctggcggttgtgcttcgctgcttctttcgccgtaacaaaatggcctttgctgtcat 116

Query: 361 tcgccatataacagttcagaattcgcatatttcctcctgagttgtccggggaatactgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tcgccatataacagttcagaattcgcatatttcctcctgagttgtccggggaatactgaa 56

Query: 421 tcctccggtctggcagtgtgtgcagtactgctccccataataatcgtggtgacat 475
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 55  tcctccggtctggcagtgtgtgcagtaccgctccccataataatcgtggtgacat 1

2) unnamed in NC_017626


>NC_008563_P3|38|G34|117624189|YP_853102.1|Escherichia_coli_APEC_O1|-|57098..57592|-|APECO1_1082|hypothetical 
          Length = 495

 Score = 860 bits (2219), Expect = e-250
 Identities = 445/457 (97%)
 Strand = Plus / Minus

Query: 19  ccctgctgtataccccggtaccgcagcgtgggcagcacttttccccctcataatcttcgt 78
           |||||||||||||||||||||| || |  ||||||||||||||||||||||||| |||||
Sbjct: 457 ccctgctgtataccccggtaccacaactcgggcagcacttttccccctcataattttcgt 398

Query: 79  cacacatcacacaaaaccactttctcaccttcaccgtataatccggaaccgtcatgccct 138
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 397 cacacatcacacaaaaccactttctcaccttcaccgtataatccggaaccgtcataccct 338

Query: 139 gcagatgcaaacgacgggcctctttctctgccgggtcaagccaggtacatcgcagcagga 198
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 337 gcagatgcaaacgacgggcctctttctctgccgggtcaagccaggtgcatcgcagcagga 278

Query: 199 ttttttcagcgacagtcatctggtcatgttcaaaccacggtggttgtccgtcattgcccc 258
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ttttctcagcgacagtcatctggtcatgttcaaaccacggtggttgtccgtcattgcccc 218

Query: 259 gctgaagtgttaacgggcatccacaggacacacagcacaaaacgtcctgtcggttgtgct 318
           ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 217 gctgaagtgttaatgggcatccacaggacacacagcacaaaacgtcctggcggttgtgct 158

Query: 319 tcgcagcttctttcgccgtaacaaaatggcctttgctgtcattcgccatataacagttca 378
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tcgctgcttctttcgccgtaacaaaatggcctttgctgtcattcgccatataacagttca 98

Query: 379 gaattcgcatatttcctcctgagttgtccggggaatactgaatcctccggtctggcagtg 438
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  gaattcgcatatttcctcctgagttgtccggggaatactgaatcctccggtctggcagtg 38

Query: 439 tgtgcagtactgctccccataataatcgtggtgacat 475
           |||||||||| ||||||||||||||||||||||||||
Sbjct: 37  tgtgcagtaccgctccccataataatcgtggtgacat 1


 Score = 24 bits (61), Expect = 2e+02
 Identities = 13/14 (93%)
 Strand = Plus / Minus

Query: 1   cctcctgccgcccc 14
           ||||||||| ||||
Sbjct: 472 cctcctgccccccc 459

3) EC042_2236 in NC_017626


>NC_008563_P3|38|G34|117624189|YP_853102.1|Escherichia_coli_APEC_O1|-|57098..57592|-|APECO1_1082|hypothetical 
          Length = 495

 Score = 774 bits (1997), Expect = e-224
 Identities = 402/410 (98%)
 Strand = Plus / Plus

Query: 1   atgcgaattctgaactgttatatggcgaatgacagcaaaggccattttgttacggcgaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  atgcgaattctgaactgttatatggcgaatgacagcaaaggccattttgttacggcgaaa 147

Query: 61  gaagcagcgaagcacaaccgccaggacgttttgtgctgtgtgtcctgtggatgcccgtta 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 148 gaagcagcgaagcacaaccgccaggacgttttgtgctgtgtgtcctgtggatgcccatta 207

Query: 121 acacttcagcggggcaatgacggacaaccaccgtggtttgaacatgaccagatgactgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 acacttcagcggggcaatgacggacaaccaccgtggtttgaacatgaccagatgactgtc 267

Query: 181 gctgagaaaatcctgctgcgatgcacctggcttgacccggcagagaaagaggcccgtcgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gctgagaaaatcctgctgcgatgcacctggcttgacccggcagagaaagaggcccgtcgt 327

Query: 241 ttgcatctgcagggtatgacggttccggattatacggtgaaggtgagaaagtggttttgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttgcatctgcagggtatgacggttccggattatacggtgaaggtgagaaagtggttttgt 387

Query: 301 gtgatgtgtgacgaagattatgaaggagaaaagtgctgcccgcgttgtggtaccggggta 360
           ||||||||||||||| ||||||| || ||||||||||||||| |||||||||||||||||
Sbjct: 388 gtgatgtgtgacgaaaattatgagggggaaaagtgctgcccgagttgtggtaccggggta 447

Query: 361 tacagcagggaggggggctgcaggaaggcaactggaaggataggaactga 410
           |||||||||||||||||  |||||| ||||||||||||||||||||||||
Sbjct: 448 tacagcagggagggggg--gcaggagggcaactggaaggataggaactga 495