Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
traE protein |
NC_004668 (Enterococcus faecalis V583) |
0.0 |
100 |
|
hypothetical protein |
NC_015977 (Roseburia hominis A2-183) |
0.0 |
74 |
|
hypothetical protein |
NC_021014 (Ruminococcus sp. SR1/5) |
0.0 |
76 |
|
hypothetical protein |
NC_014828 (Ethanoligenens harbinense YUAN-3) |
0.0 |
71 |
|
hypothetical protein |
NC_012781 (Eubacterium rectale ATCC 33656) |
0.0 |
77 |
|
type IV conjugative transfer system protein TraE |
NC_016630 (Filifactor alocis ATCC 35896) |
0.0 |
67 |
|
TraE family protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
0.0 |
73 |
|
hypothetical protein |
NC_015737 (Clostridium sp. SY8519) |
0.0 |
68 |
|
TraE protein |
NC_014376 (Clostridium saccharolyticum WM1) |
0.0 |
68 |
|
TrsE-like protein |
NC_018867 (Dehalobacter sp. CF) |
0.0 |
72 |
|
hydrolase |
NC_009089 (Clostridium difficile 630) |
0.0 |
70 |
|
hypothetical protein |
NC_021022 ([Ruminococcus] obeum A2-162) |
0.0 |
70 |
|
Domain of unknown function DUF87. |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
0.0 |
67 |
|
hypothetical protein |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
0.0 |
68 |
|
conjugal transfer protein |
NC_012471 (Streptococcus equi 4047) |
0.0 |
61 |
|
type IV conjugative transfer system protein TraE |
NC_016630 (Filifactor alocis ATCC 35896) |
0.0 |
59 |
|
conjugal transfer protein |
NC_013316 (Clostridium difficile R20291) |
0.0 |
59 |
|
putative conjugal transfer protein |
NC_022239 (Streptococcus anginosus C238) |
0.0 |
59 |
|
conjugal transfer protein |
NC_012470 (Streptococcus equi H70) |
0.0 |
57 |
|
transfer complex protein |
NC_018712 (Streptococcus dysgalactiae RE378) |
0.0 |
59 |
|
putative conjugal transfer protein |
NC_022246 (Streptococcus intermedius B196) |
0.0 |
59 |
|
conjugative transposon protein |
NC_009089 (Clostridium difficile 630) |
0.0 |
59 |
|
conjugal transfer protein |
NC_017567 (Streptococcus dysgalactiae ATCC 12394) |
0.0 |
59 |
|
hydrolase |
NC_009089 (Clostridium difficile 630) |
0.0 |
60 |
|
putative conjugal transfer protein |
NC_022239 (Streptococcus anginosus C238) |
0.0 |
59 |
|
Type IV secretion system protein virB4 |
NC_019042 (Streptococcus dysgalactiae AC-2713) |
0.0 |
59 |
|
putative conjugal transfer protein |
NC_022237 (Streptococcus intermedius C270) |
0.0 |
59 |
|
conjugal transfer protein |
NC_022239 (Streptococcus anginosus C238) |
0.0 |
61 |
|
Type IV secretory pathway, VirB4 component |
NC_021994 (Enterococcus faecium AUS0085) |
0.0 |
61 |
|
Type IV secretory pathway, VirB4 components |
NC_017022 (Enterococcus faecium Aus0004) |
0.0 |
61 |
|
conjugal transfer protein |
NC_012471 (Streptococcus equi 4047) |
0.0 |
59 |
|
hypothetical protein |
NC_014828 (Ethanoligenens harbinense YUAN-3) |
0.0 |
59 |
|
type IV conjugative transfer system protein TraE |
NC_016630 (Filifactor alocis ATCC 35896) |
0.0 |
61 |
|
TrsE-like protein |
NC_021507 (Streptococcus agalactiae ILRI112) |
0.0 |
60 |
|
conjugal transfer protein |
NC_022246 (Streptococcus intermedius B196) |
0.0 |
59 |
|
type IV secretory pathway, VirB4 component |
NC_014494 (Streptococcus pneumoniae AP200) |
0.0 |
60 |
|
hypothetical protein |
NC_010376 (Finegoldia magna ATCC 29328) |
0.0 |
59 |
|
putative type IV secretory pathway VirB4 protein |
NC_013164 (Anaerococcus prevotii DSM 20548) |
0.0 |
60 |
|
hypothetical protein |
NC_014376 (Clostridium saccharolyticum WM1) |
0.0 |
59 |
|
conjugal transfer protein |
NC_017620 (Streptococcus suis D9) |
0.0 |
57 |
|
hypothetical protein |
NC_009706 (Clostridium kluyveri DSM 555) |
0.0 |
59 |
|
hypothetical protein |
NC_015977 (Roseburia hominis A2-183) |
0.0 |
58 |
|
hypothetical protein |
NC_011837 (Clostridium kluyveri NBRC 12016) |
0.0 |
59 |
|
hypothetical protein |
NC_015977 (Roseburia hominis A2-183) |
0.0 |
58 |
|
Domain of unknown function DUF87. |
NC_021039 (Ruminococcus champanellensis 18P13) |
0.0 |
51 |
|
hypothetical protein |
NC_015977 (Roseburia hominis A2-183) |
0.0 |
52 |
|
TrsE |
NC_008024 (Streptococcus pyogenes MGAS10750) |
7e-172 |
56 |
|
TrsE protein |
NC_014825 (Ruminococcus albus 7) |
9e-156 |
44 |
|
TRSE protein |
NC_018867 (Dehalobacter sp. CF) |
1e-138 |
41 |
|
TRSE protein |
NC_018866 (Dehalobacter sp. DCA) |
1e-138 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004668_R1' AND ph.id_pai_orf='38' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc