Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
PapA protein |
NC_004431 (Escherichia coli CFT073) |
1e-80 |
100 |
|
protein PapA |
NC_008253 (Escherichia coli 536) |
1e-66 |
79 |
|
PapA protein |
NC_004431 (Escherichia coli CFT073) |
2e-65 |
78 |
|
major pilin subunit PapA |
NC_017631 (Escherichia coli ABU 83972) |
2e-61 |
83 |
|
PapA protein |
NC_017644 (Escherichia coli NA114) |
6e-60 |
75 |
|
P-fimbriae major subunit |
NC_011751 (Escherichia coli UMN026) |
6e-57 |
80 |
|
major pilin protein PapA |
NC_011750 (Escherichia coli IAI39) |
1e-53 |
68 |
|
major pilin protein PapA |
NC_017646 (Escherichia coli CE10) |
3e-51 |
68 |
|
major pilin protein PapA |
NC_011742 (Escherichia coli S88) |
1e-50 |
66 |
|
major fibrial protein |
NC_008563 (Escherichia coli APEC O1) |
3e-48 |
65 |
|
major pilin subunit PapA |
NC_017646 (Escherichia coli CE10) |
6e-44 |
63 |
|
major pilin protein PapA |
NC_017632 (Escherichia coli UM146) |
2e-43 |
63 |
|
major pilin subunit PapA |
NC_007946 (Escherichia coli UTI89) |
2e-43 |
63 |
|
PixA protein |
NC_008253 (Escherichia coli 536) |
2e-33 |
50 |
|
P pilus assembly protein, pilin FimA |
NC_017309 (Edwardsiella tarda FL6-60) |
5e-26 |
45 |
|
P pilus assembly protein, pilin FimA |
NC_013508 (Edwardsiella tarda EIB202) |
7e-26 |
46 |
|
P pilus assembly protein, pilin FimA |
NC_020796 (Edwardsiella tarda C07-087) |
9e-26 |
45 |
|
fimbrial subunit |
NC_022000 (Proteus mirabilis BB2000) |
4e-25 |
43 |
|
fimbrial subunit |
NC_010554 (Proteus mirabilis HI4320) |
4e-25 |
43 |
|
P pilus assembly protein, pilin FimA |
NC_020064 (Serratia marcescens FGI94) |
6e-25 |
45 |
|
fimbrial protein |
NC_020211 (Serratia marcescens WW4) |
2e-24 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004431_P1' AND ph.id_pai_orf='38' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc