Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
ISSfl3 OrfC |
NC_011353 (Escherichia coli EC4115) |
4e-62 |
100 |
|
transposase |
NC_013008 (Escherichia coli TW14359) |
4e-62 |
100 |
|
hypothetical protein |
NC_002695 (Escherichia coli Sakai) |
6e-62 |
100 |
|
hypothetical protein |
NC_017906 (Escherichia coli Xuzhou21) |
6e-62 |
100 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
8e-62 |
100 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
8e-62 |
100 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
9e-44 |
99 |
|
putative IS orf, fragment |
NC_007607 (Shigella dysenteriae Sd197) |
1e-42 |
96 |
|
ISSfl4 ORF3 |
NC_017319 (Shigella flexneri 2002017) |
1e-42 |
96 |
|
ISSfl4 ORF3 |
NC_004851 (Shigella flexneri 301) |
1e-42 |
96 |
|
transposase IS66 |
NC_022268 (Serratia sp. ATCC 39006) |
4e-39 |
54 |
|
hypothetical protein |
NC_018525 (Pectobacterium carotovorum PCC21) |
1e-36 |
52 |
|
ISPpu14, transposase |
NC_015733 (Pseudomonas putida S16) |
3e-24 |
46 |
|
transposase IS66 |
NC_015851 (Acidithiobacillus caldus SM-1) |
4e-23 |
44 |
|
transposase and inactivated derivative |
NC_009720 (Xanthobacter autotrophicus Py2) |
8e-23 |
47 |
|
transposase IS66 |
NC_015851 (Acidithiobacillus caldus SM-1) |
8e-22 |
43 |
|
ISSfl4 ORF3 |
NC_007613 (Shigella boydii Sb227) |
2e-21 |
44 |
|
ISSfl4 transposase (pseudogene) |
NC_017724 (Escherichia coli ETEC H10407) |
6e-21 |
43 |
|
hypothetical protein |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-19 |
41 |
|
hypothetical protein |
NC_018650 (Escherichia coli 2009EL-2050) |
2e-19 |
41 |
|
hypothetical protein |
NC_018661 (Escherichia coli 2009EL-2071) |
2e-19 |
41 |
|
hypothetical protein |
NC_018658 (Escherichia coli 2011C-3493) |
2e-19 |
41 |
|
hypothetical protein |
NC_018658 (Escherichia coli 2011C-3493) |
2e-19 |
41 |
|
hypothetical protein |
NC_008253 (Escherichia coli 536) |
2e-19 |
41 |
|
hypothetical protein |
NC_013353 (Escherichia coli 12009) |
4e-19 |
41 |
|
ISSfl4 ORF3 |
NC_011353 (Escherichia coli EC4115) |
2e-18 |
41 |
|
IS66 family transposase truncated |
NC_015711 (Myxococcus fulvus HW-1) |
3e-18 |
42 |
|
transposase family |
NC_010658 (Shigella boydii CDC 3083-94) |
4e-18 |
43 |
|
hypothetical protein |
NC_013655 (Escherichia coli SE15) |
1e-17 |
41 |
|
transposase |
NC_011749 (Escherichia coli UMN026) |
1e-17 |
41 |
|
hypothetical protein |
NC_004463 (Bradyrhizobium japonicum USDA 110) |
4e-17 |
41 |
|
hypothetical protein |
NC_017249 (Bradyrhizobium japonicum USDA 6) |
4e-17 |
41 |
|
transposase for IS66 |
NC_018661 (Escherichia coli 2009EL-2071) |
7e-17 |
41 |
|
ISPpu15, transposase Orf2 |
NC_008554 (Syntrophobacter fumaroxidans MPOB) |
2e-16 |
41 |
|
transposase IS66 |
NC_008576 (Magnetococcus marinus MC-1) |
5e-16 |
43 |
|
hypothetical protein |
NC_017663 (Escherichia coli P12b) |
2e-15 |
42 |
|
transposase (issfl3), orfc |
NC_014623 (Stigmatella aurantiaca DW4/3-1) |
8e-15 |
41 |
|
protein encoded within IS |
NC_016822 (Shigella sonnei 53G) |
8e-15 |
41 |
|
protein encoded within IS |
NC_007384 (Shigella sonnei Ss046) |
8e-15 |
41 |
|
hypothetical protein |
NC_017630 (Escherichia coli UM146) |
9e-15 |
41 |
|
IS encoded protein within CP-933O |
NC_002655 (Escherichia coli EDL933) |
2e-12 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_002655_P1' AND ph.id_pai_orf='38' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc