Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
TraR/DksA family transcriptional regulator |
NC_013592 (Dickeya dadantii Ech586) |
3e-09 |
47 |
|
hypothetical protein |
NC_014500 (Dickeya dadantii 3937) |
8e-09 |
44 |
|
TraR/DksA family transcriptional regulator |
NC_015733 (Pseudomonas putida S16) |
1e-08 |
51 |
|
molecular chaperone DnaK |
NC_021491 (Pseudomonas putida H8234) |
1e-08 |
50 |
|
CP80 |
NC_013956 (Pantoea ananatis LMG 20103) |
2e-07 |
47 |
|
hypothetical protein |
NC_017531 (Pantoea ananatis AJ13355) |
5e-07 |
47 |
|
TraR/DksA family transcriptional regulator |
NC_016816 (Pantoea ananatis LMG 5342) |
5e-07 |
47 |
|
TraR/DksA family transcriptional regulator |
NC_017554 (Pantoea ananatis PA13) |
5e-07 |
47 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_015968 (Enterobacter asburiae LF7a) |
8e-07 |
52 |
|
TraR/DksA family transcriptional regulator |
NC_009832 (Serratia proteamaculans 568) |
1e-06 |
41 |
|
hypothetical protein |
NC_015663 (Enterobacter aerogenes KCTC 2190) |
9e-07 |
50 |
|
hypothetical protein |
NC_014752 (Neisseria lactamica 020-06) |
9e-07 |
42 |
|
transcriptional regulator, TraR/DksA family |
NC_022268 (Serratia sp. ATCC 39006) |
1e-06 |
52 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_017047 (Rahnella aquatilis HX2) |
1e-06 |
41 |
|
repressor, PtrB |
NC_020912 (Pseudomonas aeruginosa B136-33) |
2e-06 |
51 |
|
repressor, PtrB |
NC_018080 (Pseudomonas aeruginosa DK2) |
2e-06 |
51 |
|
repressor, PtrB |
NC_011770 (Pseudomonas aeruginosa LESB58) |
2e-06 |
51 |
|
repressor, PtrB |
NC_017548 (Pseudomonas aeruginosa M18) |
2e-06 |
51 |
|
hypothetical protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
2e-06 |
51 |
|
repressor, PtrB |
NC_002516 (Pseudomonas aeruginosa PAO1) |
2e-06 |
51 |
|
repressor, PtrB |
NC_021577 (Pseudomonas aeruginosa RP73) |
2e-06 |
51 |
|
hypothetical protein |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
2e-06 |
51 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_021066 (Raoultella ornithinolytica B6) |
3e-06 |
45 |
|
hypothetical protein |
NC_018649 (Leptospirillum ferriphilum ML-04) |
4e-06 |
41 |
|
DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR family |
NC_011852 (Haemophilus parasuis SH0165) |
4e-06 |
50 |
|
hypothetical protein |
NC_020418 (Morganella morganii KT) |
4e-06 |
44 |
|
transcriptional regulator, TraR/DksA family |
NC_022268 (Serratia sp. ATCC 39006) |
4e-06 |
41 |
|
DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR family |
NC_021521 (Haemophilus parasuis ZJ0906) |
5e-06 |
50 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_016845 (Klebsiella pneumoniae HS11286) |
5e-06 |
46 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_022082 (Klebsiella pneumoniae JM45) |
5e-06 |
46 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_017540 (Klebsiella pneumoniae KCTC 2242) |
5e-06 |
46 |
|
TraR/DksA family transcriptional regulator |
NC_008751 (Desulfovibrio vulgaris DP4) |
5e-06 |
43 |
|
hypothetical protein |
NC_009656 (Pseudomonas aeruginosa PA7) |
6e-06 |
50 |
|
TraR/DksA family transcriptional regulator |
NC_008751 (Desulfovibrio vulgaris DP4) |
7e-06 |
41 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_014973 (Geobacter sp. M18) |
8e-06 |
50 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_014972 (Desulfobulbus propionicus DSM 2032) |
9e-06 |
45 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_015556 (Pseudomonas fulva 12-X) |
1e-05 |
47 |
|
TraR protein |
NC_011413 (Escherichia coli SE11) |
1e-05 |
42 |
|
DnaK suppressor protein |
NC_017271 (Xanthomonas campestris 756C) |
1e-05 |
42 |
|
phage protein |
NC_016745 (Oceanimonas sp. GK1) |
2e-05 |
49 |
|
hypothetical protein |
NC_009348 (Aeromonas salmonicida A449) |
2e-05 |
41 |
|
phage protein |
NC_009348 (Aeromonas salmonicida A449) |
2e-05 |
41 |
|
putative Zinc-finger containing protein |
NC_020418 (Morganella morganii KT) |
3e-05 |
44 |
|
hypothetical protein |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
3e-05 |
41 |
|
hypothetical protein |
NC_021500 (Enterobacter sp. R4-368) |
3e-05 |
42 |
|
hypothetical protein |
NC_015740 (Pseudomonas stutzeri ATCC 17588) |
4e-05 |
44 |
|
hypothetical protein |
NC_017532 (Pseudomonas stutzeri DSM 4166) |
4e-05 |
44 |
|
hypothetical protein |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
6e-05 |
46 |
|
hypothetical protein |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
6e-05 |
46 |
|
hypothetical protein |
NC_017445 (Erwinia sp. Ejp617) |
6e-05 |
46 |
|
hypothetical protein |
NC_010694 (Erwinia tasmaniensis Et1/99) |
7e-05 |
45 |
|
TraR/DksA family transcriptional regulator |
NC_011768 (Desulfatibacillum alkenivorans AK-01) |
1e-04 |
43 |
|
TraR/DksA family transcriptional regulator |
NC_010334 (Shewanella halifaxensis HAW-EB4) |
2e-04 |
50 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_022268 (Serratia sp. ATCC 39006) |
3e-04 |
42 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_016818 (Rahnella aquatilis CIP 78.65) |
4e-04 |
42 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_015061 (Rahnella sp. Y9602) |
7e-04 |
44 |
|
hypothetical protein |
NC_008044 (Ruegeria sp. TM1040) |
0.001 |
46 |
|
Protein traR |
NC_017505 (Neisseria meningitidis alpha710) |
0.001 |
54 |
|
C4-type zinc finger protein |
NC_018650 (Escherichia coli 2009EL-2050) |
0.001 |
45 |
|
C4-type zinc finger protein |
NC_018661 (Escherichia coli 2009EL-2071) |
0.001 |
45 |
|
putative C4-type zinc finger protein |
NC_018658 (Escherichia coli 2011C-3493) |
0.001 |
45 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_011283 (Klebsiella pneumoniae 342) |
0.001 |
41 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_011283 (Klebsiella pneumoniae 342) |
0.002 |
50 |
|
Putative Zinc-finger protein |
NC_017644 (Escherichia coli NA114) |
0.002 |
45 |
|
hypothetical protein |
NC_017632 (Escherichia coli UM146) |
0.002 |
45 |
|
C4-type zinc finger protein |
NC_007946 (Escherichia coli UTI89) |
0.002 |
45 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
0.003 |
42 |
|
putative C4-type zinc finger protein |
NC_013364 (Escherichia coli 11128) |
0.005 |
43 |
|
C4-type zinc finger TraR |
NC_002695 (Escherichia coli Sakai) |
0.005 |
43 |
|
C4-type zinc finger TraR |
NC_017906 (Escherichia coli Xuzhou21) |
0.005 |
43 |
|
hypothetical protein |
NC_012811 (Methylobacterium extorquens AM1) |
0.005 |
43 |
|
TraR/DksA family transcriptional regulator |
NC_008751 (Desulfovibrio vulgaris DP4) |
0.006 |
43 |
|
C4-type zinc finger DksA/TraR family protein |
NC_002937 (Desulfovibrio vulgaris Hildenborough) |
0.006 |
43 |
|
TraR/DksA family transcriptional regulator |
NC_010468 (Escherichia coli ATCC 8739) |
0.007 |
45 |
|
hypothetical protein |
NC_002695 (Escherichia coli Sakai) |
0.007 |
45 |
|
hypothetical protein |
NC_017906 (Escherichia coli Xuzhou21) |
0.007 |
45 |
|
hypothetical protein |
NC_018650 (Escherichia coli 2009EL-2050) |
0.009 |
43 |
|
hypothetical protein |
NC_018661 (Escherichia coli 2009EL-2071) |
0.009 |
43 |
|
hypothetical protein |
NC_018658 (Escherichia coli 2011C-3493) |
0.009 |
43 |
|
hypothetical protein |
NC_011748 (Escherichia coli 55989) |
0.009 |
43 |
|
phage/conjugal plasmid C-4 type zinc finger protein |
NC_009801 (Escherichia coli E24377A) |
0.009 |
43 |
|
hypothetical protein |
NC_011741 (Escherichia coli IAI1) |
0.009 |
43 |
|
TraR/DksA family transcriptional regulator |
NC_012880 (Dickeya dadantii Ech703) |
0.010 |
42 |
|
C4-type zinc finger protein |
NC_013941 (Escherichia coli CB9615) |
0.011 |
45 |
|
hypothetical protein |
NC_011745 (Escherichia coli ED1a) |
0.011 |
45 |
|
C4-type zinc finger TraR |
NC_002695 (Escherichia coli Sakai) |
0.011 |
45 |
|
C4-type zinc finger TraR |
NC_017906 (Escherichia coli Xuzhou21) |
0.011 |
45 |
|
hypothetical protein |
NC_008253 (Escherichia coli 536) |
0.013 |
45 |
|
C4-type zinc finger protein TraR-family |
NC_011993 (Escherichia coli LF82) |
0.013 |
45 |
|
hypothetical protein |
NC_017634 (Escherichia coli NRG 857C) |
0.013 |
45 |
|
phage protein |
NC_013654 (Escherichia coli SE15) |
0.013 |
45 |
|
hypothetical protein |
NC_011740 (Escherichia fergusonii ATCC 35469) |
0.013 |
45 |
|
C4-type zinc finger protein |
NC_013361 (Escherichia coli 11368) |
0.014 |
43 |
|
C4-type zinc finger protein |
NC_013361 (Escherichia coli 11368) |
0.017 |
43 |
|
C4-type zinc finger protein |
NC_013353 (Escherichia coli 12009) |
0.017 |
43 |
|
hypothetical protein |
NC_013941 (Escherichia coli CB9615) |
0.017 |
43 |
|
hypothetical protein |
NC_017656 (Escherichia coli RM12579) |
0.017 |
43 |
|
C4-type zinc finger protein |
NC_002695 (Escherichia coli Sakai) |
0.017 |
43 |
|
DnaK suppressor protein |
NC_013008 (Escherichia coli TW14359) |
0.017 |
43 |
|
DnaK suppressor protein |
NC_013008 (Escherichia coli TW14359) |
0.017 |
43 |
|
putative C4-type zinc finger protein |
NC_017906 (Escherichia coli Xuzhou21) |
0.017 |
43 |
|
ybl16 |
NC_012892 (Escherichia coli BL21(DE3)) |
0.018 |
43 |
|
hypothetical protein |
NC_012971 (Escherichia coli BL21(DE3)) |
0.018 |
43 |
|
TraR/DksA family transcriptional regulator |
NC_012947 (Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG) |
0.018 |
43 |
|
hypothetical protein |
NC_012967 (Escherichia coli REL606) |
0.018 |
43 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_017310 (Desulfovibrio vulgaris RCH1) |
0.020 |
42 |
|
hypothetical protein |
NC_021659 (Serratia plymuthica S13) |
0.021 |
41 |
|
putative C4-type zinc finger protein |
NC_020163 (Escherichia coli APEC O78) |
0.022 |
41 |
|
hypothetical protein |
NC_013941 (Escherichia coli CB9615) |
0.030 |
43 |
|
hypothetical protein |
NC_017656 (Escherichia coli RM12579) |
0.030 |
43 |
|
hypothetical protein |
NC_011751 (Escherichia coli UMN026) |
0.030 |
43 |
|
hypothetical protein |
NC_013941 (Escherichia coli CB9615) |
0.032 |
42 |
|
hypothetical protein |
NC_017656 (Escherichia coli RM12579) |
0.032 |
42 |
|
hypothetical protein |
NC_011751 (Escherichia coli UMN026) |
0.040 |
41 |
|
hypothetical protein |
NC_015460 (Gallibacterium anatis UMN179) |
0.046 |
41 |
|
prophage PSPPH06, DksA/TraR family C4-type zinc finger protein |
NC_005773 (Pseudomonas syringae 1448A) |
0.62 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='EF611302' AND ph.id_pai_orf='38' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc