Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
Type III secretion inner membrane channel protein (LcrDHrcVEscVSsaV); Invasion protein InvA |
NC_021870 (Salmonella bongori N268-08) |
0.0 |
99 |
|
virulence associated secretory protein |
NC_015761 (Salmonella bongori NCTC 12419) |
0.0 |
98 |
|
invasion protein InvA |
NC_022241 (Salmonella enterica 3114) |
0.0 |
100 |
|
type III secretion system protein InvA |
NC_021820 (Salmonella enterica 08-1736) |
0.0 |
100 |
|
needle complex export protein |
NC_016856 (Salmonella enterica 14028S) |
0.0 |
100 |
|
secretory apparatus of type III secretion system |
NC_017046 (Salmonella enterica 798) |
0.0 |
100 |
|
hypothetical protein |
NC_011147 (Salmonella enterica AKU12601) |
0.0 |
100 |
|
secretory protein |
NC_006511 (Salmonella enterica ATCC 9150) |
0.0 |
100 |
|
putative secretory protein |
NC_022221 (Salmonella enterica CDC1983-67) |
0.0 |
100 |
|
type III secretion system protein InvA |
NC_021844 (Salmonella enterica CFSAN000189) |
0.0 |
100 |
|
type III secretion system protein InvA |
NC_021814 (Salmonella enterica CFSAN001921) |
0.0 |
100 |
|
type III secretion system protein InvA |
NC_021818 (Salmonella enterica CFSAN002050) |
0.0 |
100 |
|
possible secretory protein (associated with virulence) |
NC_003198 (Salmonella enterica CT18) |
0.0 |
100 |
|
invasion protein InvA |
NC_011094 (Salmonella enterica CVM19633) |
0.0 |
100 |
|
secretory protein (associated with virulence) |
NC_016854 (Salmonella enterica D23580) |
0.0 |
100 |
|
needle complex export protein |
NC_003197 (Salmonella enterica LT2) |
0.0 |
100 |
|
hypothetical protein |
NC_016832 (Salmonella enterica P-stx-12) |
0.0 |
100 |
|
secretory protein |
NC_011294 (Salmonella enterica P125109) |
0.0 |
100 |
|
virulence associated secretory protein |
NC_012125 (Salmonella enterica RKS4594) |
0.0 |
100 |
|
putative secretory protein (associated with virulence) |
NC_016831 (Salmonella enterica RKS5078) |
0.0 |
100 |
|
type III secretion system protein InvA |
NC_021984 (Salmonella enterica S06004) |
0.0 |
100 |
|
invasion protein |
NC_006905 (Salmonella enterica SC-B67) |
0.0 |
100 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
0.0 |
100 |
|
secretory apparatus of type III secretion system |
NC_016810 (Salmonella enterica SL1344) |
0.0 |
100 |
|
invasion protein InvA |
NC_011149 (Salmonella enterica SL483) |
0.0 |
100 |
|
Invasion protein invA |
NC_016857 (Salmonella enterica ST4/74) |
0.0 |
100 |
|
invasion protein InvA |
NC_016860 (Salmonella enterica T000240) |
0.0 |
100 |
|
virulence-associated secretory protein |
NC_004631 (Salmonella enterica Ty2) |
0.0 |
100 |
|
invasion protein InvA |
NC_021176 (Salmonella enterica Ty21a) |
0.0 |
100 |
|
type III secretion system protein InvA |
NC_021151 (Salmonella enterica U288) |
0.0 |
100 |
|
needle complex export protein |
NC_016863 (Salmonella enterica UK-1) |
0.0 |
100 |
|
secretory protein |
NC_011274 (Salmonella enterica 287/91) |
0.0 |
99 |
|
invasion protein InvA |
NC_011205 (Salmonella enterica CT_02021853) |
0.0 |
99 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
0.0 |
99 |
|
type III secretion system protein InvA |
NC_020307 (Salmonella enterica CFSAN001992) |
0.0 |
99 |
|
type III secretion system protein InvA |
NC_021810 (Salmonella enterica 41578) |
0.0 |
99 |
|
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), Invasion protein InvA |
NC_017623 (Salmonella enterica B182) |
0.0 |
99 |
|
type III secretion system protein InvA |
NC_021812 (Salmonella enterica CFSAN002069) |
0.0 |
99 |
|
invasion protein InvA |
NC_011080 (Salmonella enterica SL254) |
0.0 |
99 |
|
invasion protein InvA |
NC_011083 (Salmonella enterica SL476) |
0.0 |
99 |
|
Protein mxiA |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
0.0 |
99 |
|
putative flagellar biosynthesis protein FlhA |
NC_021505 (Pseudomonas putida NBRC 14164) |
0.0 |
66 |
|
invasion protein |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
0.0 |
78 |
|
type III needle complex export protein |
NC_012751 (Candidatus Hamiltonella defensa T5A) |
0.0 |
69 |
|
MxiA, innermembrane protein, component of the Mxi-Spa secretion machinery |
NC_017319 (Shigella flexneri 2002017) |
0.0 |
65 |
|
type III secretion system protein |
NC_017626 (Escherichia coli 042) |
0.0 |
64 |
|
type III secretion apparatus protein, invasion protein |
NC_017646 (Escherichia coli CE10) |
0.0 |
64 |
|
invasion protein |
NC_011751 (Escherichia coli UMN026) |
0.0 |
64 |
|
type III secretion apparatus InvA |
NC_007712 (Sodalis glossinidius morsitans) |
0.0 |
64 |
|
MxiA |
NC_007607 (Shigella dysenteriae Sd197) |
0.0 |
65 |
|
MxiA |
NC_007385 (Shigella sonnei Ss046) |
0.0 |
65 |
|
MxiA |
NC_010660 (Shigella boydii CDC 3083-94) |
0.0 |
65 |
|
Mxi-Spa secretion machinery protein MxiA |
NC_004851 (Shigella flexneri 301) |
0.0 |
65 |
|
type III secretion protein, HrcV family |
NC_011353 (Escherichia coli EC4115) |
0.0 |
65 |
|
type III secretion apparatus protein |
NC_002655 (Escherichia coli EDL933) |
0.0 |
65 |
|
EivA |
NC_002695 (Escherichia coli Sakai) |
0.0 |
65 |
|
type III secretion apparatus protein |
NC_013008 (Escherichia coli TW14359) |
0.0 |
65 |
|
protein EivA |
NC_017906 (Escherichia coli Xuzhou21) |
0.0 |
65 |
|
type III secretion apparatus protein |
NC_013941 (Escherichia coli CB9615) |
0.0 |
64 |
|
type III secretion system protein InvA |
NC_017656 (Escherichia coli RM12579) |
0.0 |
64 |
|
protein InvA |
NC_016830 (Pseudomonas fluorescens F113) |
0.0 |
65 |
|
invasion protein |
NC_019670 (Pseudomonas sp. UW4) |
2e-177 |
64 |
|
type III secretion system apparatus protein |
NC_008800 (Yersinia enterocolitica 8081) |
8e-168 |
54 |
|
type III secretion apparatus InvA |
NC_007712 (Sodalis glossinidius morsitans) |
5e-166 |
56 |
|
type III secretion system protein InvA |
NC_017731 (Providencia stuartii MRSN 2154) |
1e-165 |
54 |
|
type III secretion system protein |
NC_010554 (Proteus mirabilis HI4320) |
2e-143 |
51 |
|
type III secretion apparatus InvA |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
1e-142 |
51 |
|
type III secretion apparatus |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
1e-142 |
51 |
|
Type III secretion apparatus InvA |
NC_017445 (Erwinia sp. Ejp617) |
5e-142 |
50 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
3e-140 |
52 |
|
type III secretion apparatus InvA |
NC_013961 (Erwinia amylovora CFBP1430) |
3e-140 |
52 |
|
type III secretion apparatus protein InvA |
NC_013961 (Erwinia amylovora CFBP1430) |
9e-139 |
53 |
|
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
NC_020418 (Morganella morganii KT) |
5e-138 |
51 |
|
type III secretion system protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
2e-137 |
53 |
|
type III secretion apparatus |
NC_010694 (Erwinia tasmaniensis Et1/99) |
2e-136 |
52 |
|
type III secretion system protein |
NC_022000 (Proteus mirabilis BB2000) |
4e-131 |
48 |
|
xanthomonas secretion apparatus protein |
NC_013722 (Xanthomonas albilineans GPE PC73) |
2e-126 |
47 |
|
type III secretory pathway subunit EscV |
NC_007645 (Hahella chejuensis KCTC 2396) |
1e-115 |
45 |
|
Low calcium response locus protein D (LcrD) |
NC_016642 (Pseudovibrio sp. FO-BEG1) |
7e-106 |
42 |
|
putative membrane-bound Yop protein YscV |
NC_005813 (Yersinia pestis 91001) |
5e-105 |
42 |
|
type III secretion protein LcrD |
NC_010157 (Yersinia pestis Angola) |
5e-105 |
42 |
|
membrane-bound Yop protein |
NC_008122 (Yersinia pestis Antiqua) |
5e-105 |
42 |
|
low calcium response protein D |
NC_003131 (Yersinia pestis CO92) |
5e-105 |
42 |
|
low calcium response protein D |
NC_017153 (Yersinia pestis D106004) |
5e-105 |
42 |
|
low calcium response protein D |
NC_017157 (Yersinia pestis D182038) |
5e-105 |
42 |
|
membrane-bound Yop protein |
NC_009377 (Yersinia pestis Pestoides F) |
5e-105 |
42 |
|
low calcium response protein D |
NC_014017 (Yersinia pestis Z176003) |
5e-105 |
42 |
|
lcrD, yscV; membrane-bound Yop protein |
NC_006153 (Yersinia pseudotuberculosis IP 32953) |
5e-105 |
42 |
|
HrcV family type III secretion protein |
NC_010635 (Yersinia pseudotuberculosis PB1/+) |
5e-105 |
42 |
|
low calcium response locus membrane protein D,required for Yop secretion |
NC_015475 (Yersinia enterocolitica 105.5R(r)) |
7e-105 |
43 |
|
type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV) |
NC_017565 (Yersinia enterocolitica Y11) |
7e-105 |
43 |
|
low calcium response locus membrane protein d |
NC_008791 (Yersinia enterocolitica 8081) |
2e-104 |
43 |
|
secretion system apparatus protein SsaV |
NC_005085 (Chromobacterium violaceum ATCC 12472) |
5e-103 |
43 |
|
Low calcium response locus protein D |
NC_015717 (Hyphomicrobium sp. MC1) |
9e-103 |
42 |
|
AscV protein |
NC_009350 (Aeromonas salmonicida A449) |
2e-102 |
41 |
|
type III secretory pathway subunit EscV |
NC_007645 (Hahella chejuensis KCTC 2396) |
3e-100 |
42 |
|
Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
5e-100 |
43 |
|
type III secretion pore protein |
NC_018829 (Bordetella bronchiseptica MO149) |
5e-100 |
43 |
|
type III secretion pore protein |
NC_018518 (Bordetella pertussis 18323) |
2e-99 |
43 |
|
putative type III secretion pore protein |
NC_017223 (Bordetella pertussis CS) |
2e-99 |
43 |
|
type III secretion pore protein |
NC_002929 (Bordetella pertussis Tohama I) |
2e-99 |
43 |
|
type III secretion pore protein |
NC_018828 (Bordetella parapertussis Bpp5) |
7e-99 |
43 |
|
type III secretion pore protein |
NC_019382 (Bordetella bronchiseptica 253) |
1e-98 |
43 |
|
type III secretion pore protein |
NC_002927 (Bordetella bronchiseptica RB50) |
5e-98 |
44 |
|
type III secretion pore protein |
NC_002928 (Bordetella parapertussis 12822) |
7e-98 |
44 |
|
secretion system apparatus protein SsaV |
NC_009997 (Shewanella baltica OS195) |
2e-97 |
42 |
|
type III secretion protein, HrcV family |
NC_016901 (Shewanella baltica OS678) |
2e-97 |
42 |
|
type III secretion protein, HrcV family |
NC_017579 (Shewanella baltica OS117) |
8e-97 |
42 |
|
secretion system apparatus protein SsaV |
NC_009052 (Shewanella baltica OS155) |
8e-97 |
42 |
|
type III secretion protein, HrcV family |
NC_017571 (Shewanella baltica BA175) |
4e-95 |
42 |
|
T3SS structural protein EscV |
NC_013716 (Citrobacter rodentium ICC168) |
2e-94 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_003198_P5' AND ph.id_pai_orf='37' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc