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Homologs of lssR gene of AY144116

23

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) pcrR
( YP_003039895.1 )

similar to transcription regulator proteins lcrr and pcrr

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

9e-60

91

2) plu3760
( NP_930966.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

3e-56

92

3) G655_16660
( YP_007710172.1 )

transcriptional regulator protein PcrR

NC_020912
(Pseudomonas aeruginosa B136-33)

3e-39

59

4) PADK2_17180
( YP_006483417.1 )

transcriptional regulator protein PcrR

NC_018080
(Pseudomonas aeruginosa DK2)

3e-39

59

5) pcrR
( YP_002441208.1 )

transcriptional regulator protein PcrR

NC_011770
(Pseudomonas aeruginosa LESB58)

3e-39

59

6) pcrR
( YP_005975927.1 )

transcriptional regulator protein PcrR

NC_017548
(Pseudomonas aeruginosa M18)

3e-39

59

7) pcrR
( NP_250395.1 )

transcriptional regulator protein PcrR

NC_002516
(Pseudomonas aeruginosa PAO1)

3e-39

59

8) pcrR
( YP_791541.1 )

transcriptional regulator protein PcrR

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

3e-39

59

9) pcrR
( YP_005980846.1 )

transcriptional regulator

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

4e-39

58

10) YE105_P0015
( YP_004424917.1 )

low calcium response locus protein R

NC_015475
(Yersinia enterocolitica 105.5R(r))

3e-26

49

11) lcrR
( YP_001004071.1 )

low calcium response locus protein R

NC_008791
(Yersinia enterocolitica 8081)

3e-26

49

12) Y11_p0851
( YP_006007933.1 )

type III secretion low calcium response protein (LcrR)

NC_017565
(Yersinia enterocolitica Y11)

3e-26

49

13) lcrR
( NP_995378.1 )

hypothetical protein

NC_005813
(Yersinia pestis 91001)

4e-26

49

14) lcrR
( YP_001604465.1 )

type III secretion system regulator LcrR

NC_010157
(Yersinia pestis Angola)

4e-26

49

15) YPA_CD0029
( YP_636821.1 )

low calcium response locus protein R

NC_008122
(Yersinia pestis Antiqua)

4e-26

49

16) lcrR
( NP_395167.1 )

low calcium response protein R

NC_003131
(Yersinia pestis CO92)

4e-26

49

17) lcrR
( YP_005503167.1 )

type III secretion system regulator LcrR

NC_017153
(Yersinia pestis D106004)

4e-26

49

18) lcrR
( YP_005506950.1 )

type III secretion system regulator LcrR

NC_017157
(Yersinia pestis D182038)

4e-26

49

19) YPDSF_3984
( YP_001154613.1 )

hypothetical protein

NC_009377
(Yersinia pestis Pestoides F)

4e-26

49

20) lcrR
( YP_003560526.1 )

type III secretion system regulator LcrR

NC_014017
(Yersinia pestis Z176003)

4e-26

49

21) pYV0059
( YP_068468.1 )

hypothetical protein

NC_006153
(Yersinia pseudotuberculosis IP 32953)

4e-26

49

22) YPTS_4278
( YP_001874678.1 )

type III secretion system regulator LcrR

NC_010635
(Yersinia pseudotuberculosis PB1/+)

4e-26

49

23) acrR
( YP_001144291.1 )

hypothetical protein

NC_009350
(Aeromonas salmonicida A449)

4e-24

55

• Sequence Alignments

1) pcrR in NC_012962


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  222 bits (827),  Expect = 9e-60, Method: Compositional matrix adjust.
 Identities = 128/142 (91%), Positives = 138/142 (98%), Gaps = 0/142 (0%)

Query  1    MNHDPLTSWFEERGYPVQLHCMGSSSIPLGWRVWCEGCEIAWRYDAPRVWIIMLRRTQQR  60
            MNHDPLT+WFEERGY+V+ H MGSS+IPLGWRVW E+CEIAWRYDAPRVWIIMLRRT+QR
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   RGLANPFAPLYLLATAAMTVLGPGSRLYGQVNTLVDSPLNDERLTRFYHRWTGASEVAPG  120
            RGLANPFAPLYLLATA+M+VLGPGSRLYGQVNTLVDSPLNDERL+RFYHRWTGASE+ PG
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEASCVISLHQMRKQQKKV  142
            WFELEASCVISLHQMRKQQKKV
Sbjct  121  WFELEASCVISLHQMRKQQKKV  142

2) plu3760 in NC_005126


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  210 bits (782),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 131/143 (92%), Positives = 141/143 (99%), Gaps = 0/143 (0%)

Query  1    MNRDPLTPWFEEQGYSVQPHCMGNSPIPLGWRVWYEGCEIAWRYDAPRVWIVMLRRTRQR  60
            MN+DPLTPWFEE+GYSV+PH MG+S+IPLGWRVWYE+CEIAWRYDAPRVWI+MLRRTRQR
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   RGLANPFAPLYllatatmamlGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGANEVVPG  120
            RGLANPFAPLYLLATATMA+LGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGA+E+ PG
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEASCVISLHQMRKQQKKVQ  143
            WFELEASCVISLHQMRKQQKKVQ
Sbjct  121  WFELEASCVISLHQMRKQQKKVQ  143

3) G655_16660 in NC_020912


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  154 bits (568),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 82/140 (59%), Positives = 111/140 (80%), Gaps = 0/140 (0%)

Query  1    MSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAHGCELAWRCDGERVWIVMLRRRQAR  60
            M+ DPL PWF  RG +V+PH +  ++I+LGW+V  ++CE+AWR D+ RVWI+MLRR + R
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   SGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGERMARFYRRWTGAAEPADG  120
             GLANPFA+LYLLA AT+  LGP  RLYG+V +L +SPL +ER+ARFY+RWTGA+E   G
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEAGRVVTQRSLRKRQK  140
            WFELEA+ V++ + +RK+QK
Sbjct  121  WFELEASCVISLHQMRKQQK  140

4) PADK2_17180 in NC_018080


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  154 bits (568),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 82/140 (59%), Positives = 111/140 (80%), Gaps = 0/140 (0%)

Query  1    MSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAHGCELAWRCDGERVWIVMLRRRQAR  60
            M+ DPL PWF  RG +V+PH +  ++I+LGW+V  ++CE+AWR D+ RVWI+MLRR + R
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   SGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGERMARFYRRWTGAAEPADG  120
             GLANPFA+LYLLA AT+  LGP  RLYG+V +L +SPL +ER+ARFY+RWTGA+E   G
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEAGRVVTQRSLRKRQK  140
            WFELEA+ V++ + +RK+QK
Sbjct  121  WFELEASCVISLHQMRKQQK  140

5) pcrR in NC_011770


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  154 bits (568),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 82/140 (59%), Positives = 111/140 (80%), Gaps = 0/140 (0%)

Query  1    MSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAHGCELAWRCDGERVWIVMLRRRQAR  60
            M+ DPL PWF  RG +V+PH +  ++I+LGW+V  ++CE+AWR D+ RVWI+MLRR + R
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   SGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGERMARFYRRWTGAAEPADG  120
             GLANPFA+LYLLA AT+  LGP  RLYG+V +L +SPL +ER+ARFY+RWTGA+E   G
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEAGRVVTQRSLRKRQK  140
            WFELEA+ V++ + +RK+QK
Sbjct  121  WFELEASCVISLHQMRKQQK  140

6) pcrR in NC_017548


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  154 bits (568),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 82/140 (59%), Positives = 111/140 (80%), Gaps = 0/140 (0%)

Query  1    MSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAHGCELAWRCDGERVWIVMLRRRQAR  60
            M+ DPL PWF  RG +V+PH +  ++I+LGW+V  ++CE+AWR D+ RVWI+MLRR + R
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   SGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGERMARFYRRWTGAAEPADG  120
             GLANPFA+LYLLA AT+  LGP  RLYG+V +L +SPL +ER+ARFY+RWTGA+E   G
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEAGRVVTQRSLRKRQK  140
            WFELEA+ V++ + +RK+QK
Sbjct  121  WFELEASCVISLHQMRKQQK  140

7) pcrR in NC_002516


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  154 bits (568),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 82/140 (59%), Positives = 111/140 (80%), Gaps = 0/140 (0%)

Query  1    MSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAHGCELAWRCDGERVWIVMLRRRQAR  60
            M+ DPL PWF  RG +V+PH +  ++I+LGW+V  ++CE+AWR D+ RVWI+MLRR + R
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   SGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGERMARFYRRWTGAAEPADG  120
             GLANPFA+LYLLA AT+  LGP  RLYG+V +L +SPL +ER+ARFY+RWTGA+E   G
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEAGRVVTQRSLRKRQK  140
            WFELEA+ V++ + +RK+QK
Sbjct  121  WFELEASCVISLHQMRKQQK  140

8) pcrR in NC_008463


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  154 bits (568),  Expect = 3e-39, Method: Compositional matrix adjust.
 Identities = 82/140 (59%), Positives = 111/140 (80%), Gaps = 0/140 (0%)

Query  1    MSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAHGCELAWRCDGERVWIVMLRRRQAR  60
            M+ DPL PWF  RG +V+PH +  ++I+LGW+V  ++CE+AWR D+ RVWI+MLRR + R
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   SGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGERMARFYRRWTGAAEPADG  120
             GLANPFA+LYLLA AT+  LGP  RLYG+V +L +SPL +ER+ARFY+RWTGA+E   G
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEAGRVVTQRSLRKRQK  140
            WFELEA+ V++ + +RK+QK
Sbjct  121  WFELEASCVISLHQMRKQQK  140

9) pcrR in NC_017549


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  153 bits (566),  Expect = 4e-39, Method: Compositional matrix adjust.
 Identities = 81/140 (58%), Positives = 110/140 (79%), Gaps = 0/140 (0%)

Query  1    MSADPLIPWFLARGLAVRPHCLRDTSIALGWQVLAHGCELAWRCDGERVWIVMLRRRQAR  60
            M+ DPL PWF  RG +V+PH +  ++I+LGW+V  ++CE+AWR D+ RVWI+MLRR + R
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAPRVWIIMLRRTRQR  60

Query  61   SGLANPFAALYLLAEATLDTLGPRQRLYGKVLALAGSPLPGERMERFYRRWTGAAEPADG  120
             GLANPFA+LYLLA AT+  LGP  RLYG+V +L +SPL +ER+ RFY+RWTGA+E   G
Sbjct  61   RGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIEPG  120

Query  121  WFELEAGRVVTQRSLRKRQK  140
            WFELEA+ V++ + +RK+QK
Sbjct  121  WFELEASCVISLHQMRKQQK  140

10) lcrR in NC_008791


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 105/143 (74%), Gaps = 2/143 (1%)

Query  1    MMEDPLIPWLTEHGLVCHPHTLSGAPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M +DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

11) YE105_P0015 in NC_015475


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 105/143 (74%), Gaps = 2/143 (1%)

Query  1    MMEDPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M +DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

12) Y11_p0851 in NC_017565


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 105/143 (74%), Gaps = 2/143 (1%)

Query  1    MMEDPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M +DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

13) lcrR in NC_010157


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

14) YPA_CD0029 in NC_008122


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

15) lcrR in NC_005813


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

16) lcrR in NC_003131


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

17) lcrR in NC_017153


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

18) lcrR in NC_017157


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

19) YPDSF_3984 in NC_009377


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

20) lcrR in NC_014017


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

21) pYV0059 in NC_006153


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

22) YPTS_4278 in NC_010635


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 70/143 (49%), Positives = 104/143 (73%), Gaps = 2/143 (1%)

Query  1    MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVE  60
            M  DPL PW+ E+G   HPH +++++I+LG      +  +AWR   +  RVWI++++R  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWR--YDAPRVWIIMLRRTR  58

Query  61   QRRGLKNPFaalymlanaaraVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELS  120
            QRRGL NPFA+LY+LA A+ AVLGP+  LYG+V+ L +S+L+ +RLA+FY+RWTGA E+ 
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  121  TGWFSLKVSQVITLSNMKKRQNN  143
             GWF L  S VI+L +M+K+Q++
Sbjct  119  PGWFELEASCVISLHQMRKQQKK  141

23) acrR in NC_009350


> AY144116|37|G37|27550068|AAO18051.1|Photorhabdus_luminescens_W14|+|31354..31788|lssR|-|LssR
Length=144

 Score =  104 bits (376),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 78/142 (55%), Positives = 107/142 (76%), Gaps = 2/142 (1%)

Query  6    LTSDPLIPWLQAKGVAVASHYLGATPIQLGHAFCYRQIYLAWRVDPTTRRVWIMLVRREG  65
            +  DPL PW++ +G +V +HY+G+++I LG    Y +  +AWR D+   RVWI+++RR  
Sbjct  1    MNHDPLTPWFEERGYSVHPHYMGSSAIPLGWRVWYEDCEIAWRYDAP--RVWIIMLRRTR  58

Query  66   ERAGLANPFaalyllaeatlavlGPGHFLYGNVDVFRssslssERLGRFYLRWTGASEPE  125
            +R GLANPFA+LYLLA AT+AVLGPG  LYG+V+ +  S+L+ ERL+RFY RWTGASE E
Sbjct  59   QRRGLANPFAPLYLLATATMAVLGPGSRLYGQVNTLVDSPLNDERLARFYHRWTGASEIE  118

Query  126  PGWFMLATEQVCSLRDMRKRQK  147
            PGWF L +  V SL++MRK+QK
Sbjct  119  PGWFELEASCVISLHQMRKQQK  140