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Homologs of unnamed gene of AF241171

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) APECO78_02380
( YP_007379659.1 )

transposase

NC_020163
(Escherichia coli APEC O78)

2e-24

2) S1431
( NP_837027.1 )

IS911 orfB

NC_004741
(Shigella flexneri 2457T)

1e-23

3) ECP_4550
( YP_672387.1 )

transposase

NC_008253
(Escherichia coli 536)

2e-23

4) EAM_0057
( YP_003537158.1 )

transposase

NC_013971
(Erwinia amylovora ATCC 49946)

2e-22

5) SARI_02034
( YP_001571055.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

1e-18

6) HDEF_1152
( YP_002923965.1 )

ISHde3, transposase

NC_012751
(Candidatus Hamiltonella defensa T5A)

3e-15

7) HDEF_2282
( YP_002924969.1 )

ISHde3, transposase

NC_012751
(Candidatus Hamiltonella defensa T5A)

3e-15

8) PM3016_4146
( YP_005314073.1 )

integrase catalytic subunit

NC_016935
(Paenibacillus mucilaginosus 3016)

9e-15

9) YPD4_pCD0007
( YP_005503153.1 )

hypothetical protein

NC_017153
(Yersinia pestis D106004)

2e-14

10) YPD8_pCD0007
( YP_005506934.1 )

hypothetical protein

NC_017157
(Yersinia pestis D182038)

2e-14

11) YPZ3_pCD0007
( YP_003560512.1 )

hypothetical protein

NC_014017
(Yersinia pestis Z176003)

2e-14

12) Neut_2189
( YP_748376.1 )

transposase and inactivated derivatives

NC_008344
(Nitrosomonas eutropha C91)

2e-11

• Sequence Alignments

1) APECO78_02380 in NC_020163


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 59/103 (58%), Positives = 76/103 (74%), Gaps = 0/103 (0%)

Query  5    LAGRLMKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKR  64
            + + LM+ELGLVS Q  +H Y+++  E+  IPN L+R+FAV  PNQVWCGD+ YIW+  R
Sbjct  34   MRAALMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQVWCGDIMYIWAQGR  93

Query  65   WAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKP  107
            W YLA VLDL AR+ +GWA S  PD+ L +KAL+MA E RGKP
Sbjct  94   WHYLAAVLDLQARRVIGWAFSAKPDAELVIKALDMAYEQRGKP  136

2) S1431 in NC_004741


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 58/98 (60%), Positives = 73/98 (75%), Gaps = 0/98 (0%)

Query  1    MKELGLVSCQQPTHRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLA  60
            M+ELGLVS Q  +H Y+++  E+  IPN L+R+FAV  PNQVWCGD+ YIW+  RW YLA
Sbjct  39   MRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQVWCGDIMYIWAQGRWHYLA  98

Query  61   VVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKP  98
             VLDL AR+ +GWA S  PD+ L +KAL+MA E RGKP
Sbjct  99   AVLDLQARRVIGWAFSAKPDAELVIKALDMAYEQRGKP  136

3) ECP_4550 in NC_008253


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score =  101 bits (366),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 53/103 (52%), Positives = 76/103 (74%), Gaps = 0/103 (0%)

Query  13   LAGNLMKELDISSCQVPVHKYKRGGNEHVEIPNHLDRQFAVTAPDQVWCGDVTYIWTGKC  72
            + + LM+EL++ S Q   H Y+++  E+ +IPN+L+R+FAV  P+QVWCGD+ YIW+   
Sbjct  34   MRAALMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQVWCGDIMYIWAQGR  93

Query  73   RAYLAVVLDLFARKPVGWAMSTSPDSALTVKALQMAWELRGKP  115
            + YLA VLDL AR+ +GWA S+ PD+ L +KAL+MA E RGKP
Sbjct  94   WHYLAAVLDLQARRVIGWAFSAKPDAELVIKALDMAYEQRGKP  136

4) EAM_0057 in NC_013971


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 54/101 (54%), Positives = 71/101 (71%), Gaps = 0/101 (0%)

Query  34   TKLMKALNIISCQRPGHRYKKASKEHIEIPNYLDRQFAVTEPNQAWCGDVTYIWTGKRWV  93
            + LM+ L ++S Q  +H Y++A  E+ +IPN L+R+FAV  PNQ WCGD+ YIW+  RW 
Sbjct  36   AALMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQVWCGDIMYIWAQGRWH  95

Query  94   YLAVVLDLFSRKPVGWAMSFFPDSALTAKALSMAWEARGKP  134
            YLA VLDL +R+ +GWA S  PD+ L  KAL MA E RGKP
Sbjct  96   YLAAVLDLQARRVIGWAFSAKPDAELVIKALDMAYEQRGKP  136

5) SARI_02034 in NC_010067


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (70%), Gaps = 0/96 (0%)

Query  13   LAGRLMKEPGLVSCQQPAHRYKRGGHEHIAIPNHPERQFAVTETNQVWCGNVTYIWTGKR  72
            + + LM+E GLVS Q  +H Y+++  E+  IPN+ +R+FAV   NQVWCG++ YIW+  R
Sbjct  34   MRAALMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQVWCGDIMYIWAQGR  93

Query  73   WAYLAVVLDLFARKPVGRAMLFSLDSRLTIKALEMA  108
            W YLA VLDL AR+ +G+A     D+ L IKAL+MA
Sbjct  94   WHYLAAVLDLQARRVIGWAFSAKPDAELVIKALDMA  129

6) HDEF_1152 in NC_012751


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 74.7 bits (264),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 69/100 (69%), Gaps = 1/100 (1%)

Query  1    MMREAGIESKPRQPR-YQPSGKKAVYAPEHLNREFTVKAPNQVGCGDVTDIWSGTCWLYL  59
            +MRE G+ SK   ++ Y+ +       P++LNREF+V+ PNQV CGD+  IW+   W YL
Sbjct  38   LMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQVWCGDIMYIWAQGRWHYL  97

Query  60   SVVLDLYARKILGGAFSTSPHSQLTQQALMLACESRGRPK  99
            + VLDL AR+++G AFS+ P+++L  +AL +A E RG+P+
Sbjct  98   AAVLDLQARRVIGWAFSAKPDAELVIKALDMAYEQRGKPQ  137

7) HDEF_2282 in NC_012751


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 74.7 bits (264),  Expect = 3e-15, Method: Compositional matrix adjust.
 Identities = 45/100 (45%), Positives = 69/100 (69%), Gaps = 1/100 (1%)

Query  1    MMREAGIESKPRQPR-YQPSGKKAVYAPEHLNREFTVKAPNQVGCGDVTDIWSGTCWLYL  59
            +MRE G+ SK   ++ Y+ +       P++LNREF+V+ PNQV CGD+  IW+   W YL
Sbjct  38   LMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQVWCGDIMYIWAQGRWHYL  97

Query  60   SVVLDLYARKILGGAFSTSPHSQLTQQALMLACESRGRPK  99
            + VLDL AR+++G AFS+ P+++L  +AL +A E RG+P+
Sbjct  98   AAVLDLQARRVIGWAFSAKPDAELVIKALDMAYEQRGKPQ  137

8) PM3016_4146 in NC_016935


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 73.1 bits (258),  Expect = 9e-15, Method: Compositional matrix adjust.
 Identities = 44/101 (44%), Positives = 67/101 (67%), Gaps = 6/101 (5%)

Query  1    MKEMGLKSITVGK--YKATTNSKHNMPVHDNILNRQFKVDAPNKVWVTDITYVATGEGWL  58
            M+E+GL S   G   Y+ +   + ++P   N LNR+F V+ PN+VW  DI Y+ +   W 
Sbjct  39   MRELGLVSKQPGSHAYRQAMVERPDIP---NRLNREFAVQRPNQVWCGDIMYIWAQGRWH  95

Query  59   YLASVMDLFSRKIVGWATGARMTRELVIDALELAY-RRQKP  98
            YLA+V+DL +R+++GWA +A+   ELVI AL++AY +R KP
Sbjct  96   YLAAVLDLQARRVIGWAFSAKPDAELVIKALDMAYEQRGKP  136

9) YPD4_pCD0007 in NC_017153


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 72.1 bits (254),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 47/106 (45%), Positives = 65/106 (62%), Gaps = 0/106 (0%)

Query  44   SLLMRQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSEPNR  103
            +L    + ++VV  +   LMRE GL S+QPG   YR         P+ L+R+F    PN+
Sbjct  20   GLATTSTVFDVVGSMRAALMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQ  79

Query  104  VWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVCRA  149
            VW G I YI  +G W YLA V+DL +RR++G A+S+ PDAELV +A
Sbjct  80   VWCGDIMYIWAQGRWHYLAAVLDLQARRVIGWAFSAKPDAELVIKA  125

10) YPD8_pCD0007 in NC_017157


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 72.1 bits (254),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 47/106 (45%), Positives = 65/106 (62%), Gaps = 0/106 (0%)

Query  44   SLLMRQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSEPNR  103
            +L    + ++VV  +   LMRE GL S+QPG   YR         P+ L+R+F    PN+
Sbjct  20   GLATTSTVFDVVGSMRAALMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQ  79

Query  104  VWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVCRA  149
            VW G I YI  +G W YLA V+DL +RR++G A+S+ PDAELV +A
Sbjct  80   VWCGDIMYIWAQGRWHYLAAVLDLQARRVIGWAFSAKPDAELVIKA  125

11) YPZ3_pCD0007 in NC_014017


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 72.1 bits (254),  Expect = 2e-14, Method: Compositional matrix adjust.
 Identities = 47/106 (45%), Positives = 65/106 (62%), Gaps = 0/106 (0%)

Query  44   SLLMRQSGYNVVRWLARRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFKPSEPNR  103
            +L    + ++VV  +   LMRE GL S+QPG   YR         P+ L+R+F    PN+
Sbjct  20   GLATTSTVFDVVGSMRAALMRELGLVSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQ  79

Query  104  VWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVCRA  149
            VW G I YI  +G W YLA V+DL +RR++G A+S+ PDAELV +A
Sbjct  80   VWCGDIMYIWAQGRWHYLAAVLDLQARRVIGWAFSAKPDAELVIKA  125

12) Neut_2189 in NC_008344


> AF241171|37|G37|12698413|AAK01527.1|Pseudomonas_aeruginosa_X24509|+|42117..42530|-|-|transposase 
B
Length=137

 Score = 62.1 bits (216),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 42/98 (43%), Positives = 60/98 (62%), Gaps = 16/98 (16%)

Query  31   LMRENGLCPIWKRKFINTTDSKHDY-------PVAPNLLDRQFNVAQPNQAWVSDITYIR  83
            LMRE GL        ++   + H Y       P  PN L+R+F V +PNQ W +DI YI+
Sbjct  38   LMRELGL--------VSKQPGSHAYRQAMVERPDIPNRLNREFAVQRPNQVWCGDIMYIW  89

Query  84   TRQGWLYLAAVMDLYSRKIIGWAIMAPTMPAELVVAAL  121
            ++  W YLAAV+DL +R++IGWA+ ++   AELV+ AL
Sbjct  90   AQGRWHYLAAVLDLQARRVIGWAF-SAKPDAELVIKAL  126