Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of HH0268 gene of NC_004917_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HH0268
( NP_859799.1 )

hypothetical protein

NC_004917
(Helicobacter hepaticus ATCC 51449)

1e-43

100

2) HCBAA847_1637
( YP_007601498.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

8e-16

• Sequence Alignments

1) HH0268 in NC_004917


> NC_004917_P1|36|G36|32265767|NP_859799.1|Helicobacter_hepaticus_ATCC_51449|+|39255..39566|-|HH0268|hypothetical 
protein
Length=103

 Score =  169 bits (624),  Expect = 1e-43, Method: Compositional matrix adjust.
 Identities = 103/103 (100%), Positives = 103/103 (100%), Gaps = 0/103 (0%)

Query  1    MSALSAVKNEIPLQPNRVFAAILLRYGYNPKMMWKRNGVYGCGNSGFRFYPKDWTFSISR  60
            MSALSAVKNEIPLQPNRVFAAILLRYGYNPKMMWKRNGVYGCGNSGFRFYPKDWTFSISR
Sbjct  1    MSALSAVKNEIPLQPNRVFAAILLRYGYNPKMMWKRNGVYGCGNSGFRFYPKDWTFSISR  60

Query  61   WKTEYVGGQYERNFVDTFYKVVFNIATNSISWHELQDVYEVSA  103
            WKTEYVGGQYERNFVDTFYKVVFNIATNSISWHELQDVYEVSA
Sbjct  61   WKTEYVGGQYERNFVDTFYKVVFNIATNSISWHELQDVYEVSA  103

2) HCBAA847_1637 in NC_020555


> NC_004917_P1|36|G36|32265767|NP_859799.1|Helicobacter_hepaticus_ATCC_51449|+|39255..39566|-|HH0268|hypothetical 
protein
Length=103

 Score = 77.1 bits (273),  Expect = 8e-16, Method: Compositional matrix adjust.
 Identities = 46/82 (57%), Positives = 61/82 (75%), Gaps = 6/82 (7%)

Query  12  NRIFAAILQYYGYNPKNMWKRNGVYGCGHSGMYFYPDELTF--SKWEKVSRYVGGKYERE  69
           NR+FAAIL  YGYNPK MWKRNGVYGCG+SG  FYP + TF  S+W   + YVGG+YER+
Sbjct  16  NRVFAAILLRYGYNPKMMWKRNGVYGCGNSGFRFYPKDWTFSISRWK--TEYVGGQYERN  73

Query  70  SVEVFFKV--SVDAKGIEWTKV  89
            V+ F+KV  ++ +++I W  +
Sbjct  74  FVDTFYKVVFNIATNSISWHEL  95