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Homologs of SAR0452 gene of NC_002952_P2

109

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SAAG_00907
( YP_008448417.1 )

NADH dehydrogenase

NC_022113
(Staphylococcus aureus 55/2053)

0.0

100

2) SAR0452
( YP_039900.1 )

NADH dehydrogenase subunit 5

NC_002952
(Staphylococcus aureus MRSA252)

0.0

100

3) nuoF
( YP_005746152.1 )

NADH-quinone oxidoreductase subunit F

NC_017342
(Staphylococcus aureus TCH60)

0.0

100

4) C248_0502
( YP_006709263.1 )

NADH Ubiquinone plastoquinone protein

NC_018608
(Staphylococcus aureus 08BA02176)

0.0

5) ST398NM01_0518
( YP_006194591.1 )

NADH-quinone oxidoreductase subunit L

NC_017673
(Staphylococcus aureus 71193)

0.0

6) SAOV_0469
( YP_005735983.1 )

NADH dehydrogenase, subunit 5

NC_017337
(Staphylococcus aureus ED133)

0.0

7) SAPIG0518
( YP_005733328.1 )

probable NADH-quinone oxidoreductase subunit 5 (nadhdehydrogenase subunit 5)

NC_017333
(Staphylococcus aureus ST398)

0.0

8) SAB0402
( YP_415901.1 )

NADH dehydrogenase subunit 5

NC_007622
(Staphylococcus aureus RF122)

0.0

9) ndhF
( YP_005741177.1 )

NADH dehydrogenase, subunit 5

NC_017340
(Staphylococcus aureus 04-02981)

0.0

10) ECTR2_386
( YP_005749139.1 )

NADH-Ubiquinone/plastoquinone (complex I), various chains family protein

NC_017343
(Staphylococcus aureus ECT-R 2)

0.0

11) nuoF
( YP_003281341.1 )

NADH dehydrogenase subunit 5

NC_013450
(Staphylococcus aureus ED98)

0.0

12) SaurJH1_0487
( YP_001315632.1 )

NADH dehydrogenase subunit 5

NC_009632
(Staphylococcus aureus JH1)

0.0

13) SaurJH9_0474
( YP_001245854.1 )

NADH dehydrogenase subunit 5

NC_009487
(Staphylococcus aureus JH9)

0.0

14) M013TW_0414
( YP_005296881.1 )

NADH dehydrogenase, subunit 5

NC_016928
(Staphylococcus aureus M013)

0.0

15) ndhF
( YP_001441040.1 )

NADH dehydrogenase subunit 5

NC_009782
(Staphylococcus aureus Mu3)

0.0

16) ndhF
( NP_370976.1 )

NADH dehydrogenase subunit 5

NC_002758
(Staphylococcus aureus Mu50)

0.0

17) ndhF
( NP_373663.1 )

NADH dehydrogenase subunit 5

NC_002745
(Staphylococcus aureus N315)

0.0

18) SA40_0390
( YP_008587036.1 )

putative NADH-Ubiquinone/plastoquinone (complex I) protein

NC_022443
(Staphylococcus aureus SA40)

0.0

19) SA957_0405
( YP_008584503.1 )

putative NADH-Ubiquinone/plastoquinone (complex I) protein

NC_022442
(Staphylococcus aureus SA957)

0.0

20) ndhF
( YP_007582939.1 )

NADH dehydrogenase subunit 5

NC_020536
(Staphylococcus aureus ST228)

0.0

21) ndhF
( YP_007620653.1 )

NADH dehydrogenase subunit 5

NC_020566
(Staphylococcus aureus ST228)

0.0

22) ndhF
( YP_007622640.1 )

NADH dehydrogenase subunit 5

NC_020568
(Staphylococcus aureus ST228)

0.0

23) ndhF
( YP_007576952.1 )

NADH dehydrogenase subunit 5

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

0.0

24) ndhF
( YP_007618667.1 )

NADH dehydrogenase subunit 5

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

0.0

25) ndhF
( YP_007578960.1 )

NADH dehydrogenase subunit 5

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

0.0

26) ndhF
( YP_007580924.1 )

NADH dehydrogenase subunit 5

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

0.0

27) ndhF
( YP_007584903.1 )

NADH dehydrogenase subunit 5

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

0.0

28) ndhF
( YP_008167616.1 )

putative NADH-quinone oxidoreductase subunit 5

NC_021670
(Staphylococcus aureus Bmb9393)

0.0

29) SAUSA300_0425
( YP_493138.1 )

NADH dehydrogenase subunit 5

NC_007793
(Staphylococcus aureus FPR3757)

0.0

30) SAOUHSC_00412
( YP_498998.1 )

NADH dehydrogenase subunit 5

NC_007795
(Staphylococcus aureus NCTC 8325)

0.0

31) ndhF
( YP_001331452.1 )

NADH dehydrogenase subunit 5

NC_009641
(Staphylococcus aureus Newman)

0.0

32) SAT0131_00490
( YP_005751749.1 )

NADH dehydrogenase subunit 5

NC_017347
(Staphylococcus aureus T0131)

0.0

33) USA300HOU_0457
( YP_001574362.1 )

NADH dehydrogenase subunit 5

NC_010079
(Staphylococcus aureus TCH1516)

0.0

34) SATW20_05210
( YP_005730534.1 )

putative NADH-Ubiquinone/plastoquinone (complexI) protein

NC_017331
(Staphylococcus aureus TW20)

0.0

35) SAVC_01850
( YP_005289970.1 )

NADH dehydrogenase subunit 5

NC_016912
(Staphylococcus aureus VC40)

0.0

36) nuoF
( YP_185382.1 )

NADH dehydrogenase subunit 5

NC_002951
(Staphylococcus aureus COL)

0.0

37) BN843_4350
( YP_007867514.1 )

NADH dehydrogenase, subunit 5

NC_021059
(Staphylococcus aureus M1)

0.0

38) ndhF
( YP_005738570.1 )

putative NADH-Ubiquinone/plastoquinone (complex I) protein

NC_017338
(Staphylococcus aureus JKD6159)

0.0

39) ndhF
( YP_005743835.1 )

putative NADH-Ubiquinone/plastoquinone (complex I) protein

NC_017341
(Staphylococcus aureus JKD6008)

0.0

40) SAS0410
( YP_042536.1 )

NADH dehydrogenase subunit 5

NC_002953
(Staphylococcus aureus MSSA476)

0.0

41) ndhF
( NP_645224.1 )

NADH dehydrogenase subunit 5

NC_003923
(Staphylococcus aureus MW2)

0.0

42) SAEMRSA15_03770
( YP_006236748.1 )

putative NADH-Ubiquinone/plastoquinone (complex I) protein

NC_017763
(Staphylococcus aureus HO 5096 0412)

0.0

43) MS7_0425
( YP_005756888.1 )

NADH-Ubiquinone/plastoquinone (complex I), various chains family protein

NC_017351
(Staphylococcus aureus 11819-97)

0.0

44) SAKOR_00435
( YP_008490623.1 )

NADH-quinone oxidoreductase chain L

NC_022226
(Staphylococcus aureus CN1)

0.0

45) SARLGA251_03860
( YP_005754389.1 )

putative NADH-Ubiquinone/plastoquinone (complex I) protein

NC_017349
(Staphylococcus aureus LGA251)

0.0

46) CA347_446
( YP_008127329.1 )

NADH-Ubiquinone/plastoquinone (complex I), various chains family protein

NC_021554
(Staphylococcus aureus CA-347)

0.0

47) ndhF
( YP_008484447.1 )

NADH dehydrogenase I, F subunit

NC_022222
(Staphylococcus aureus 6850)

0.0

48) SAMSHR1132_03970
( YP_005324922.1 )

putative NADH-Ubiquinone/plastoquinone (complex I) protein

NC_016941
(Staphylococcus aureus MSHR1132)

7e-175

49) A284_11150
( YP_007385987.1 )

NADH dehydrogenase subunit 5

NC_020164
(Staphylococcus warneri SG1)

1e-130

50) nuoF
( YP_187681.1 )

NADH dehydrogenase subunit 5

NC_002976
(Staphylococcus epidermidis RP62A)

7e-125

51) SE2333
( NP_765888.1 )

NADH dehydrogenase subunit 5

NC_004461
(Staphylococcus epidermidis ATCC 12228)

3e-124

52) SLGD_02465
( YP_003472657.1 )

NADH dehydrogenase, subunit 5

NC_013893
(Staphylococcus lugdunensis HKU09-01)

1e-120

53) SLUG_23600
( YP_005761473.1 )

putative NADH-Ubiquinone/plastoquinone (complex I) protein

NC_017353
(Staphylococcus lugdunensis N920143)

1e-120

54) ndhF
( YP_254476.1 )

NADH dehydrogenase subunit 5

NC_007168
(Staphylococcus haemolyticus JCSC1435)

1e-119

55) MC28_2316
( YP_006829137.1 )

hypothetical protein

NC_018693
(Bacillus thuringiensis MC28)

7e-112

56) ndhF1
( YP_006927858.1 )

putative NADH-quinone oxidoreductase subunit 5

NC_018877
(Bacillus thuringiensis Bt407)

2e-111

57) CT43_CH3107
( YP_005573070.1 )

NADH dehydrogenase subunit 5

NC_017208
(Bacillus thuringiensis CT-43)

2e-111

58) H175_ch3160
( YP_007479621.1 )

NADH dehydrogenase, subunit 5

NC_020376
(Bacillus thuringiensis IS5056)

2e-111

59) BCAH187_A3198
( YP_002339147.1 )

NADH dehydrogenase subunit 5

NC_011658
(Bacillus cereus AH187)

4e-110

60) BCN_2999
( YP_005105532.1 )

NADH dehydrogenase, subunit 5

NC_016771
(Bacillus cereus NC7401)

4e-110

61) ndhF
( YP_002530697.1 )

NADH dehydrogenase subunit 5

NC_011969
(Bacillus cereus Q1)

4e-110

62) HD73_2816
( YP_007421915.1 )

hypothetical protein

NC_020238
(Bacillus cereus HD73)

8e-110

63) BATR1942_19550
( YP_003975756.1 )

NADH dehydrogenase subunit 5

NC_014639
(Bacillus atrophaeus 1942)

2e-109

64) BTF1_13250
( YP_006610753.1 )

NADH dehydrogenase subunit 5

NC_018508
(Bacillus thuringiensis HD-789)

4e-108

65) BAA_3233
( YP_002867385.1 )

NADH dehydrogenase subunit 5

NC_012659
(Bacillus anthracis A0248)

8e-107

66) ndhF
( NP_845493.1 )

NADH dehydrogenase subunit 5

NC_003997
(Bacillus anthracis Ames)

8e-107

67) ndhF
( YP_019824.1 )

NADH dehydrogenase subunit 5

NC_007530
(Bacillus anthracis Ames Ancestor)

8e-107

68) BAMEG_1428
( YP_002814030.1 )

NADH dehydrogenase subunit 5

NC_012581
(Bacillus anthracis CDC 684)

8e-107

69) H9401_3037
( YP_006210091.1 )

NADH-quinone oxidoreductase subunit L

NC_017729
(Bacillus anthracis H9401)

8e-107

70) BAS2959
( YP_029216.1 )

NADH dehydrogenase subunit 5

NC_005945
(Bacillus anthracis Sterne)

8e-107

71) BCAH820_3190
( YP_002452140.1 )

NADH dehydrogenase subunit 5

NC_011773
(Bacillus cereus AH820)

8e-107

72) BCG9842_B2072
( YP_002446644.1 )

NADH dehydrogenase subunit 5

NC_011772
(Bacillus cereus G9842)

2e-106

73) ndhF
( YP_084461.1 )

NADH dehydrogenase subunit 5

NC_006274
(Bacillus cereus E33L)

3e-106

74) BTG_03510
( YP_006602232.1 )

NADH dehydrogenase subunit 5

NC_018500
(Bacillus thuringiensis HD-771)

8e-106

75) SSP2380
( YP_302470.1 )

NADH dehydrogenase subunit 5

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

6e-104

76) ndhF
( YP_003864552.1 )

NADH dehydrogenase subunit 5

NC_014479
(Bacillus subtilis W23)

8e-104

77) BCK_19215
( YP_006597934.1 )

NADH dehydrogenase subunit 5

NC_018491
(Bacillus cereus FRI-35)

2e-103

78) BCA_3215
( YP_002750485.1 )

NADH dehydrogenase subunit 5

NC_012472
(Bacillus cereus 03BB102)

6e-103

79) bcf_15530
( YP_005119741.1 )

NADH dehydrogenase

NC_016779
(Bacillus cereus F837/76)

7e-103

80) ndhF
( NP_979493.1 )

NADH dehydrogenase, subunit 5

NC_003909
(Bacillus cereus ATCC 10987)

7e-103

81) ndhF
( YP_003792883.1 )

NADH dehydrogenase subunit L

NC_014335
(Bacillus cereus CI)

4e-102

82) ndhF
( YP_037261.1 )

NADH dehydrogenase subunit 5

NC_005957
(Bacillus thuringiensis 97-27)

4e-102

83) ndhF
( YP_895615.1 )

NADH dehydrogenase subunit 5

NC_008600
(Bacillus thuringiensis Al Hakam)

6e-102

84) MY9_0188
( YP_006229984.1 )

hypothetical protein

NC_017743
(Bacillus sp. JS)

3e-101

85) YBT020_15730
( YP_005566794.1 )

NADH dehydrogenase subunit 5

NC_017200
(Bacillus thuringiensis YBT-020)

3e-101

86) BCB4264_A3176
( YP_002367883.1 )

NADH dehydrogenase subunit 5

NC_011725
(Bacillus cereus B4264)

1e-100

87) BC3142
( NP_832883.1 )

NADH dehydrogenase subunit 5

NC_004722
(Bacillus cereus ATCC 14579 )

2e-100

88) BMB171_C2855
( YP_003665385.1 )

NADH dehydrogenase subunit 5

NC_014171
(Bacillus thuringiensis BMB171)

1e-99

89) GYO_0376
( YP_004875727.1 )

NADH-quinone oxidoreductase subunit 5

NC_016047
(Bacillus subtilis TU-B-10)

6e-99

90) ndhF
( NP_388064.1 )

NADH-quinone oxidoreductase subunit 5

NC_000964
(Bacillus subtilis 168)

3e-98

91) ndhF
( YP_007532109.1 )

putative NADH dehydrogenase NdhF

NC_020507
(Bacillus subtilis 6051-HGW)

3e-98

92) ndhF
( YP_006628369.1 )

NADH dehydrogenase

NC_018520
(Bacillus subtilis QB928)

3e-98

93) BSn5_12510
( YP_004206143.1 )

NADH dehydrogenase subunit 5

NC_014976
(Bacillus subtilis BSn5)

4e-98

94) A7A1_3299
( YP_007211076.1 )

NADH-quinone oxidoreductase subunit

NC_019896
(Bacillus subtilis BSP1)

4e-98

95) I33_0230
( YP_005555225.1 )

putative NADH-quinone oxidoreductase subunit 5

NC_017195
(Bacillus subtilis RO-NN-1)

1e-97

96) I653_00920
( YP_007660962.1 )

NADH dehydrogenase subunit 5

NC_020832
(subtilis subtilis BAB-1)

9e-98

97) Bcer98_1106
( YP_001374427.1 )

NADH dehydrogenase subunit 5

NC_009674
(Bacillus cytotoxicus NVH 391-98)

7e-97

98) ndhF
( YP_005559336.1 )

NADH dehydrogenase subunit 5

NC_017196
(Bacillus subtilis BEST195)

2e-96

99) ndhF
( YP_008077081.1 )

putative NADH dehydrogenase NdhF

NC_021362
(Bacillus licheniformis 9945A)

2e-80

100) GWCH70_1609
( YP_002949667.1 )

NADH dehydrogenase subunit 5

NC_012793
(Geobacillus sp. WCH70)

6e-79

101) ndhF
( YP_006712251.1 )

NADH dehydrogenase subunit 5

NC_006322
(Bacillus licheniformis DSM 13)

4e-73

102) ndhF
( YP_078069.1 )

NADH dehydrogenase subunit 5

NC_006270
(Bacillus licheniformis DSM 13)

4e-73

103) GC56T3_3028
( YP_003672542.1 )

NADH/Ubiquinone/plastoquinone (complex I)

NC_014206
(Geobacillus sp. C56-T3)

6e-72

104) GTCCBUS3UF5_5560
( YP_004980979.1 )

NADH dehydrogenase, subunit 5

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

9e-72

105) GYMC52_0446
( YP_004131088.1 )

NADH/ubiquinone/plastoquinone

NC_014915
(Geobacillus sp. Y412MC52)

8e-71

106) GYMC61_1324
( YP_003252452.1 )

NADH dehydrogenase subunit 5

NC_013411
(Geobacillus sp. Y412MC61)

8e-71

107) Geoth_2089
( YP_004588105.1 )

NADH dehydrogenase (quinone)

NC_015660
(Geobacillus thermoglucosidasius C56-YS93)

4e-69

108) M493_02610
( REF_PRJNA208285:M493 )

NADH dehydrogenase subunit 5

NC_022080
(Geobacillus sp. JF8)

9e-69

109) GY4MC1_1999
( YP_003989354.1 )

NADH/Ubiquinone/plastoquinone (complex I)

NC_014650
(Geobacillus sp. Y4.1MC1)

7e-68

• Sequence Alignments

1) SAAG_00907 in NC_022113


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  677 bits (2558),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/494 (100%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

2) SAR0452 in NC_002952


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  677 bits (2558),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/494 (100%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

3) nuoF in NC_017342


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  677 bits (2558),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/494 (100%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

4) C248_0502 in NC_018608


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  677 bits (2559),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/494 (99%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

5) ST398NM01_0518 in NC_017673


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  677 bits (2559),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/494 (99%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

6) SAOV_0469 in NC_017337


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  677 bits (2559),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/494 (99%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

7) SAPIG0518 in NC_017333


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  677 bits (2559),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/494 (99%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

8) SAB0402 in NC_007622


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  676 bits (2557),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/494 (99%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

9) ndhF in NC_017340


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

10) ECTR2_386 in NC_017343


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

11) nuoF in NC_013450


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2547),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 487/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPILFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMP+LFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

12) SaurJH1_0487 in NC_009632


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

13) SaurJH9_0474 in NC_009487


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

14) M013TW_0414 in NC_016928


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2550),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/494 (99%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVSQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRV+QHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAislllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFA+SLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

15) ndhF in NC_009782


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

16) ndhF in NC_002758


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

17) ndhF in NC_002745


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

18) SA40_0390 in NC_022443


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2550),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/494 (99%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVSQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRV+QHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAislllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFA+SLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

19) SA957_0405 in NC_022442


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2550),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/494 (99%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVSQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRV+QHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAislllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFA+SLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

20) ndhF in NC_020529


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

21) ndhF in NC_020564


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

22) ndhF in NC_020532


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

23) ndhF in NC_020533


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

24) ndhF in NC_020537


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

25) ndhF in NC_020566


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

26) ndhF in NC_020536


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

27) ndhF in NC_020568


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  674 bits (2548),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

28) ndhF in NC_021670


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

29) SAOUHSC_00412 in NC_007795


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

30) ndhF in NC_009641


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

31) SAT0131_00490 in NC_017347


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

32) SATW20_05210 in NC_017331


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

33) SAUSA300_0425 in NC_007793


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

34) USA300HOU_0457 in NC_010079


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

35) SAVC_01850 in NC_016912


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

36) nuoF in NC_002951


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2545),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/494 (98%), Positives = 491/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFEVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+F VLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

37) BN843_4350 in NC_021059


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  673 bits (2546),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/494 (98%), Positives = 491/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsvislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGS ISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

38) ndhF in NC_017338


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  672 bits (2539),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/494 (99%), Positives = 493/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YGVLQNITTHATTPPTisviisvvilifgsllsiWVARRRYSTAFAVLYVWLVNLGEARS  480
            Y+VLQNITTHATTPPTISVIISVVILIFGSLLSIWVAR+RYS +FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

39) ndhF in NC_017341


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  672 bits (2539),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/494 (98%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGITLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWG+TLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIVHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHI HPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWVSSDRSAYEVLSALILGWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FW+SSDRSAYEVLSALIL+WSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YAVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKAFAVLYVWLVNLGEARS  480
            Y VLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

40) SAS0410 in NC_002953


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  671 bits (2537),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 493/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHMSNSTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQH++++TWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

41) ndhF in NC_003923


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  671 bits (2537),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 493/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHMSNSTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQH++++TWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYVITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIY+ITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

42) SAEMRSA15_03770 in NC_017763


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  670 bits (2534),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 485/494 (99%), Positives = 493/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHMSNSTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQH++++TWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILIAIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILI+IVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLRNITTHATTPPTvsviisvvilifgsllsiWVARHRYSKGFAVLYVWLVNLGEARS  480
            YDVL+NITTHATTPPT+SVIISVVILIFGSLLSIWVARHRYSK FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

43) MS7_0425 in NC_017351


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  669 bits (2531),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 493/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHMSNSTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQH++++TWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTYATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITT ATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

44) SAKOR_00435 in NC_022226


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  669 bits (2531),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/494 (99%), Positives = 493/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHMSNSTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQH++++TWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTYATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITT ATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

45) SARLGA251_03860 in NC_017349


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  669 bits (2528),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/494 (99%), Positives = 492/494 (99%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVVPMRYIKLYLYILVVPVLFAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPV+PMRYIKL LYILV+PVLFAVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDSLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKID LSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATGE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIATGE
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVARHRYSKTFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

46) CA347_446 in NC_021554


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  668 bits (2525),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 483/494 (98%), Positives = 494/494 (100%), Gaps = 0/494 (0%)

Query  1    MLSFQLLFSLFVialiialisgllflaPVMPMRYIKLHLYILVMPVLIAVIGFFGIHGQH  60
            MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVL+AVIGFFGIHGQH
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120
            VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVTIYIATDE  180
            DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIV+IYIAT+E
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  181  WRVPQHMSHPSWSLITDVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240
            WRVPQH++HP+WSL+T+VLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG
Sbjct  181  WRVPQHIAHPTWSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGG  240

Query  241  VILTRFAPIFDNGFAlslllilssisvllgsgislvQVDYKRQLVGSTMSQMGFMLVQCA  300
            VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA
Sbjct  241  VILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCA  300

Query  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360
            LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL
Sbjct  301  LGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFL  360

Query  361  FWISSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420
            FW+SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF
Sbjct  361  FWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYF  420

Query  421  YDVLQNITTHATTPPTisviisvvilifgsllsiWVSRHRYSKAFAVLYVWLVNLGEARS  480
            YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWV+RHRYSK+FAVLYVWLVNLGEARS
Sbjct  421  YDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARS  480

Query  481  KAIESHPNYLKKYL  494
            KAIESHPNYLKKYL
Sbjct  481  KAIESHPNYLKKYL  494

47) ndhF in NC_022222


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  651 bits (2461),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 457/467 (98%), Positives = 465/467 (99%), Gaps = 0/467 (0%)

Query  28   PVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQK  87
            PVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQK
Sbjct  28   PVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQK  87

Query  88   FSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWK  147
            FSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWK
Sbjct  88   FSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWK  147

Query  148  VPRESAKLSSMTFLCGWLAFVGAIVTIYIATGEWLVPQHMSHPSGSLITDVLLVLAVMIP  207
            VPRESAKLSSMTFLCGWLAFVGAIV+IYIATGEW VPQH++HP+ SL+T+VLLVLAVMIP
Sbjct  148  VPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLTNVLLVLAVMIP  207

Query  208  AAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFAlslllilssisv  267
            AAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISV
Sbjct  208  AAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISV  267

Query  268  llgsgislvQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGS  327
            LLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGS
Sbjct  268  LLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGS  327

Query  328  IVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWN  387
            IVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWN
Sbjct  328  IVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWN  387

Query  388  QMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPPTisviisvvili  447
            QMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPPTISVIISVVILI
Sbjct  388  QMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPPTISVIISVVILI  447

Query  448  fgsllsiWVARHRYSKAFAVLYVWLINLGEARSKAIESHPNYLKKYL  494
            FGSLLSIWVARHRYSK+FAVLYVWL+NLGEARSKAIESHPNYLKKYL
Sbjct  448  FGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKKYL  494

48) SAMSHR1132_03970 in NC_016941


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  607 bits (2292),  Expect = 7e-175, Method: Compositional matrix adjust.
 Identities = 438/467 (94%), Positives = 459/467 (99%), Gaps = 0/467 (0%)

Query  28   PAMPikyiklhlyiliMPVLFAVIGFFVFHGQYILGPFKIDRLSWLLAGFVMALGFIIQK  87
            P MP++YIKLHLYIL+MPVLFAVIGFF +HGQ +LGPFKIDRLSWLLAGFVMALGFIIQK
Sbjct  28   PVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQK  87

Query  88   FSMRYLLGDHHHRHYFPLFTAITSFASLAWMSADLRLMALCWGMTLLCLTLLMNVNRFWK  147
            FSMRYLLGDHH RHYFPLFTAITSFASLAWMS DLRLMALCWGMTLLCLTLLMNVNRFWK
Sbjct  88   FSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWK  147

Query  148  VPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWHVPQHMSNSMWSLITDVLLVLAVMIP  207
            VPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEW+VPQH++++ WSL+T+VLLVLAVMIP
Sbjct  148  VPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLTNVLLVLAVMIP  207

Query  208  AAQFPFHRWLIESATAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFAlslllilssisv  267
            AAQFPFHRWLIES TAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISV
Sbjct  208  AAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISV  267

Query  268  llgsgislvQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLLLHGIFKATLFLQSGS  327
            LLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL+LHGIFKATLFLQSGS
Sbjct  268  LLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGS  327

Query  328  IVKRFNIPKQASAKDAYGWIVIGRILAIIVAFLFWVSSDRSAYEVLSALILAWSLLVSWN  387
            IVKRFNIPKQASAKDAYGWIV+GR+LAIIVAFLFW+SSDRSAYEVLSALILAWSLLVSWN
Sbjct  328  IVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWN  387

Query  388  QMVAFSKGRMARLVGMILIAIVTFIYIITHNYFYDVLQNITTHAATPPTisviisvvili  447
            QMVAFSKGRMARLVGMILI+IVTFIYIITHNYFYDVLQNITTHA+TPPTISVIISVVILI
Sbjct  388  QMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPPTISVIISVVILI  447

Query  448  fgsllsiWVARRRYSTAFAVLYVWLVNLGEARSKAIESHPSYLKKYL  494
            FGSLLSIWVAR+RYS +FAVLYVWLVNLGEARSKAIESHP+YLKKYL
Sbjct  448  FGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKKYL  494

49) A284_11150 in NC_020164


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  460 bits (1733),  Expect = 1e-130, Method: Compositional matrix adjust.
 Identities = 306/479 (64%), Positives = 419/479 (88%), Gaps = 5/479 (1%)

Query  18   SGLIFLSDSVPTQYIKIHMYiivlpiivgliglFTVNNSVIIGPFTLDKLAWLMGSFILI  77
            SGL+FL+  +P +YIK+H+YI+V+P++ ++IG+F ++   ++GPF +D+L+WL+++F++ 
Sbjct  21   SGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMA  80

Query  78   LGFIIQKFCVRYLLGDKNYRQYFPLFTLITVFASVAWLSGDLRLMVLSWGATLLCLTLLI  137
            LGFIIQKF +RYLLGD +YR+YFPLFT IT FAS+AW+S DLRLM L WG TLLCLTLL+
Sbjct  81   LGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLM  140

Query  138  RVNRFWKVPHEAAKISAKLFVVGWLSLVIAVLLLFVSTGHWYIDAVAVDYSHLSFGMKLI  197
             VNRFWKVP+E+AK+S+  F+ GWL++V A++ ++++TG+W    V+ + +H + +  L+
Sbjct  141  NVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEW---RVPQHIAHPTWS--LL  195

Query  198  IDLFIVLAVIIPAAQFPFQSWLIESVAAPTPVSAIMHAGIVNAGGIILTRFSPVFDNPIA  257
             ++++VLAV+IPAAQFPF+ WLIESV+APTPVSAIMHAGIVNAGG+ILTRF+P+FDN +A
Sbjct  196  TNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFA  255

Query  258  ITvllliasvsvllgsgislvhvDYKRQLVGSTMSQMGFMLVQCALGAYSAAIIHLVLHG  317
            +++LL+++S+SVLLGSGISLV+VDYKRQLVGSTMSQMGFMLVQCALG YSAAIIHL+LHG
Sbjct  256  LSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHG  315

Query  318  VFKATLFLQSGSVVGRFNIPTPLTAKQSYSWIVLGRLLAIVIAFVFWFNSDHSAYELISA  377
            +FKATLFLQSGS+V RFNIP   +AK++Y+WIV+GR+LAI++AF+FW +SD+SAYE++SA
Sbjct  316  IFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSA  375

Query  378  LILAWSLMVSWNQLVAFSKSAMGKLIGIGMIVIVALVYIVTHHFFNYLLNTVHISVTHPP  437
            LILAWSL+VSWNQ+VAFSK+ M++L+G+ +I IV+++YI+TH++F  +L+ +    T PP
Sbjct  376  LILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPP  435

Query  438  llssilsigiivfgsilsiWVARHRNSHTFAVLYLWLVKLGEAKSASIESHPNYLKKYL  496
             +S I+S+ I++FGS+LSIWVARHR S TFAVLY+WLV+LGEA+S +IESHPNYLKKYL
Sbjct  436  TISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKKYL  494

50) nuoF in NC_002976


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  440 bits (1659),  Expect = 7e-125, Method: Compositional matrix adjust.
 Identities = 308/500 (62%), Positives = 433/500 (87%), Gaps = 9/500 (1%)

Query  1    MLSSELILFMFFITLVIAILSGLIFLNHRVPIQYIKFHIYLLVLPIITGLSGLIFFGERA  60
            MLS +L++ +F I+L+IA++SGL+FL   +P++YIK+H+Y+LV+P++ ++ G  FFG ++
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIG--FFGIHG  58

Query  61   N--VGPFVVDHLTWLMMTFILTLGFIIQKFSMRYLIGDMHYRKYFPFFTLITAFASLAWL  118
            +  +GPF +D+L+WL+  F+++LGFIIQKFSMRYL+GD HYR YFP+FT IT+FASLAW+
Sbjct  59   QHVLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWM  118

Query  119  SGDLRLMTMFWGATLFVLTRLIKVNKLWKVPREAARISAWSFILAWLSLLIAVILLYIAT  178
            S DLRLM++ WG TL+ LT L++VN++WKVPRE+A++S+ +F+ +WL+++ A++ +YIAT
Sbjct  119  SEDLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIAT  178

Query  179  GDWYIYSNMSDDNAINYGMRLCINLLIVLAVIIPAAQFPFQGWLIESVAAPTPVSAIMHA  238
            G+W +  ++++         L  N+L+VLAV+IPAAQFPF+ WLIESV+APTPVSAIMHA
Sbjct  179  GEWRVPQHIAHPT-----WSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHA  233

Query  239  GIVNAGGVILTRFSPVFNDEiaisllliiasisvllgsgislvHVDYKRQLVGSTISQMG  298
            GIVNAGGVILTRF+P+F++ +A+SLLLI++SISVLLGSGISLV+VDYKRQLVGST+SQMG
Sbjct  234  GIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMG  293

Query  299  FMLVQCALGAYSAAIVHLILHGVFKATLFLQSGSVVKRFNIPTPPSVKKSYGWLVFGRll  358
            FMLVQCALG YSAAI+HLILHG+FKATLFLQSGS+VKRFNIP  +S K +YGW+V GR+L
Sbjct  294  FMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVL  353

Query  359  ailiaiiFWLNSDRHAYDVLSALILAWSLMVSWNQLVAFSHGLIGRvigvcmiivvvivy  418
            AI++A++FW++SDR AY+VLSALILAWSL+VSWNQ+VAFS G ++R++G+ +I +V ++Y
Sbjct  354  AIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIY  413

Query  419  iiTHHYFFTTLSNVDihivspplisiilsiaiivFGSMLSIWVSRRRESKAFAKLYLWLI  478
            IITH+YF+  L N+  H  +PP IS+I+S+ I++FGS+LSIWV+R+R SK+FA LY+WL+
Sbjct  414  IITHNYFYDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLV  473

Query  479  KVGEAKTQSIESHPSYLKRF  498
            ++GEA++++IESHP+YLK++
Sbjct  474  NLGEARSKAIESHPNYLKKY  493

51) SE2333 in NC_004461


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  439 bits (1652),  Expect = 3e-124, Method: Compositional matrix adjust.
 Identities = 307/500 (62%), Positives = 432/500 (87%), Gaps = 9/500 (1%)

Query  1    MLSSELILFMFFITLVIAILSGLIFLNHRVPIQYIKFHIYLLVLPIITGLSGLIFFGERA  60
            MLS +L++ +F I+L+IA++SGL+FL   +P++YIK+H+Y+LV+P++ ++ G  FFG ++
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIG--FFGIHG  58

Query  61   N--VGPFVVDHLTWLMMTFILTLGFIIQKFSMRYLIGDMHYRKYFPFFTLITAFASLAWL  118
            +  +GPF +D+L+WL+  F+++LGFIIQKFSMRYL+GD HYR YFP+FT IT+FASLAW+
Sbjct  59   QHVLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWM  118

Query  119  SGDLRLMTMFWGATLFVLTRLIKVNKLWKVPREAARISAWSFILAWLSLLIAVILLYIAT  178
            S DLRLM++ WG TL+ LT L++VN++WKVPRE+A++S+ +F+ +WL+++ A++ +YIAT
Sbjct  119  SEDLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIAT  178

Query  179  GDWYIYSNMSDDNAINYGMRLCINLLIVLAVIIPAAQFPFQGWLIESVAAHTPVSAIMHA  238
            G+W +  ++++         L  N+L+VLAV+IPAAQFPF+ WLIESV+A TPVSAIMHA
Sbjct  179  GEWRVPQHIAHPT-----WSLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHA  233

Query  239  GIVNAGGVILTRFSPVFNDEiaisllliiasisvllgsgislvHVDYKRQLVGSTISQMG  298
            GIVNAGGVILTRF+P+F++ +A+SLLLI++SISVLLGSGISLV+VDYKRQLVGST+SQMG
Sbjct  234  GIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMG  293

Query  299  FMLVQCALGAYSAAIVHLILHGVFKATLFLQSGSVVKRFNIPTPPSVKKSYGWLVFGRll  358
            FMLVQCALG YSAAI+HLILHG+FKATLFLQSGS+VKRFNIP  +S K +YGW+V GR+L
Sbjct  294  FMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVL  353

Query  359  ailiaiiFWLNSDRHAYDVLSALILAWSLMVSWNQLVAFSHGLIGRvigvcmiivvvivy  418
            AI++A++FW++SDR AY+VLSALILAWSL+VSWNQ+VAFS G ++R++G+ +I +V ++Y
Sbjct  354  AIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIY  413

Query  419  iiTHHYFFTTLSNVDihivspplisiilsiaiivFGSMLSIWVSRRRESKAFAKLYLWLI  478
            IITH+YF+  L N+  H  +PP IS+I+S+ I++FGS+LSIWV+R+R SK+FA LY+WL+
Sbjct  414  IITHNYFYDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLV  473

Query  479  KVGEAKTQSIESHPSYLKRF  498
            ++GEA++++IESHP+YLK++
Sbjct  474  NLGEARSKAIESHPNYLKKY  493

52) SLGD_02465 in NC_013893


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  427 bits (1607),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 296/483 (62%), Positives = 413/483 (86%), Gaps = 7/483 (1%)

Query  18   AMLSGIVYILPSCPIKYIKLHLLCLTLPIVVAIIGLVTTQQRQVISLFAVDKLAWLLVSF  77
            A++SG++++ P  P++YIKLHL  L +P++ A+IG+   + ++V++ F +D+L+WLL +F
Sbjct  18   ALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGF  77

Query  78   ILTLGFIIQKFSMRYLLGDHNYKKYFPWFTCTTVFASIAWLSDDLRLMVFCWGltlfalt  137
            +++LGFIIQKFSMRYLLGDH+Y+ YFP FT  T FAS+AW+S+DLRLM +CWG+TL+ LT
Sbjct  78   VMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLT  137

Query  138  qllrlNRTWKVPAEAAKVSARAFllgwlalvlvvvvlYIGTGEWRIYPNISKET-TMNGA  196
             L+ +NR WKVP E+AK+S+ +FL GWLA+V  +V +YI+TGEWR+  +I+  T ++   
Sbjct  138  LLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSL---  194

Query  197  LYFLMNLLLVLSVIIPAAQYPFQSWLIESVVAPTPVSAIMHAGIVNAGGIILTRFSPVFD  256
               L N+LLVL+V+IPAAQ+PF+ WLIESV APTPVSAIMHAGIVNAGG+ILTRF+P+FD
Sbjct  195  ---LTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFD  251

Query  257  HPIALTilliisslsvligsgislvHVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  316
            + +AL++LLI+SS+SVL+GSGISLV+VDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL
Sbjct  252  NGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  311

Query  317  ILHGVFKATLFLQSGSIVKRFNIPTPPNVQRSYGWtltgrglalllailFWMINDHSAYN  376
            ILHG+FKATLFLQSGSIVKRFNIP  ++ + +YGW + GR LA+++A+LFWM +D+SAY+
Sbjct  312  ILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYE  371

Query  377  LISAFILAWSISVSWNQlialnrgiigrllgivvliFVAAVYYVTHAFFINILSAISIHV  436
            ++SA+ILAWS+ VSWNQ++A+++G ++RL+G++++ +V+ +Y +TH +F ++L  I+ H 
Sbjct  372  VLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHA  431

Query  437  THPPMISVVISIAMLVFGSILSIWVARRRDSTAFAIVYLWLVKIGEAKFKSVESHPNYLQ  496
            T PP ISV+IS+ +L+FGS+LSIWVAR+R S +FA++Y+WLV++GEA+ K++ESHPNYL+
Sbjct  432  TTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLK  491

Query  497  KYL  499
            KYL
Sbjct  492  KYL  494

53) SLUG_23600 in NC_017353


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  427 bits (1607),  Expect = 1e-120, Method: Compositional matrix adjust.
 Identities = 296/483 (62%), Positives = 413/483 (86%), Gaps = 7/483 (1%)

Query  18   AMLSGIVYILPSCPIKYIKLHLLCLTLPIVVAIIGLVTTQQRQVISLFAVDKLAWLLVSF  77
            A++SG++++ P  P++YIKLHL  L +P++ A+IG+   + ++V++ F +D+L+WLL +F
Sbjct  18   ALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGF  77

Query  78   ILTLGFIIQKFSMRYLLGDHNYKKYFPWFTCTTVFASIAWLSDDLRLMVFCWGltlfalt  137
            +++LGFIIQKFSMRYLLGDH+Y+ YFP FT  T FAS+AW+S+DLRLM +CWG+TL+ LT
Sbjct  78   VMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLT  137

Query  138  qllrlNRTWKVPAEAAKVSARAFllgwlalvlvvvvlYIGTGEWRIYPNISKET-TMNGA  196
             L+ +NR WKVP E+AK+S+ +FL GWLA+V  +V +YI+TGEWR+  +I+  T ++   
Sbjct  138  LLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSL---  194

Query  197  LYFLMNLLLVLSVIIPAAQYPFQSWLIESVVAPTPVSAIMHAGIVNAGGIILTRFSPVFD  256
               L N+LLVL+V+IPAAQ+PF+ WLIESV APTPVSAIMHAGIVNAGG+ILTRF+P+FD
Sbjct  195  ---LTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFD  251

Query  257  HPIALTilliisslsvligsgislvHVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  316
            + +AL++LLI+SS+SVL+GSGISLV+VDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL
Sbjct  252  NGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  311

Query  317  ILHGVFKATLFLQSGSIVKRFNIPTPPNVQRSYGWtltgrglalllailFWMINDHSAYN  376
            ILHG+FKATLFLQSGSIVKRFNIP  ++ + +YGW + GR LA+++A+LFWM +D+SAY+
Sbjct  312  ILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYE  371

Query  377  LISAFILAWSISVSWNQlialnrgiigrllgivvliFVAAVYYVTHAFFINILSAISIHV  436
            ++SA+ILAWS+ VSWNQ++A+++G ++RL+G++++ +V+ +Y +TH +F ++L  I+ H 
Sbjct  372  VLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHA  431

Query  437  THPPMISVVISIAMLVFGSILSIWVARRRDSTAFAIVYLWLVKIGEAKFKSVESHPNYLQ  496
            T PP ISV+IS+ +L+FGS+LSIWVAR+R S +FA++Y+WLV++GEA+ K++ESHPNYL+
Sbjct  432  TTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLK  491

Query  497  KYL  499
            KYL
Sbjct  492  KYL  494

54) ndhF in NC_007168


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  423 bits (1592),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 296/483 (62%), Positives = 415/483 (86%), Gaps = 5/483 (1%)

Query  17   IAVLSGLIFLVPSVPVKYIRlhltllllpvivgviglitiNGREVIGIFALDKLAWLVGA  76
            IA++SGL+FL P +P++YI+LHL +L++PV+ +VIG++ I+G++V+G F +D+L+WL+++
Sbjct  17   IALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAG  76

Query  77   FVLALGFIIQKFSARYLLGDRNYRKYFPLYTFTTVFASIGWLSNDLRLMVICWGLTLFCL  136
            FV+ALGFIIQKFS RYLLGD++YR YFPL+T  T FAS++W+S+DLRLM +CWG+TL+CL
Sbjct  77   FVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCL  136

Query  137  TQLIRLNRSWKVPAEAAKVSARSFIIGWvalllavvvFFIGTGDWVIDPSQDYDVSMSYG  196
            T L+ +NR WKVP E+AK+S+ +F+ GW+A++ A+V ++I+TG+W +             
Sbjct  137  TLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTW----  192

Query  197  LKlivdlllviaviipaaQYPFQSWLIESVVAPTPVSAIMHAGIVNAGGIILTRFSPVFD  256
              L+ ++LLV+AV+IPAAQ+PF+ WLIESV APTPVSAIMHAGIVNAGG+ILTRF+P+FD
Sbjct  193  -SLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFD  251

Query  257  NNIALTllliissisvligsgislvHVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  316
            N +AL+LLLI+SSISVL+GSGISLV+VDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL
Sbjct  252  NGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  311

Query  317  ILHGIFKATLFLQSGSIVKRFNIPTPPNVKRSYAWTVLGRTLAVVIAIIFFLTSSHTPYT  376
            ILHGIFKATLFLQSGSIVKRFNIP  ++ K +Y+W V+GR LA+++A++F ++S +++Y 
Sbjct  312  ILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYE  371

Query  377  LISAFILAWSLSVSWNQMVALNRGMMGRVIGIAMLIIVALVYVVTHEVFVNILNSVYMVT  436
            ++SA+ILAWSL VSWNQMVA+++G M+R++G+ ++ IV+++Y++TH+ F ++L+++   +
Sbjct  372  VLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHA  431

Query  437  PHPPLISVIICVAILVLGSIFSIWVARRRSSTAFAKVYLWLVKIGEAKFKSVESHPNYLK  496
              PP ISVII V IL++GS++SIWVAR+R S +FA +Y+WLV++GEA+ K++ESHPNYLK
Sbjct  432  TTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLK  491

Query  497  NYL  499
            +YL
Sbjct  492  KYL  494

55) MC28_2316 in NC_018693


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  397 bits (1495),  Expect = 7e-112, Method: Compositional matrix adjust.
 Identities = 251/484 (52%), Positives = 382/484 (79%), Gaps = 11/484 (2%)

Query  23   LSGLLFLNARMPLRFVHIHIGIaavpslvsllalvnnnGDRVVGPWRLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP ++D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRIMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVLANE--NLVQHGT  200
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +A+   +L+    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  201  LERTAINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLF  260
                  N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F
Sbjct  197  ------NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIF  250

Query  261  HDDIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIH  320
            ++++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IH
Sbjct  251  DNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIH  310

Query  321  LILHGLFKATLFLQAGSSVERFGVVKQSNEKMSNLWIIVGRVLGLFIAITFWFMTSGEGY  380
            LILHG+FKATLFLQ+GS V RF + KQ++ K +  WI++GRVL++++A+ FW  +   +Y
Sbjct  311  LILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAY  370

Query  381  QLVSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSQIYFTVHNSLYKWLHTNIYQ  440
            +++SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   + IY+  HN +Y  L+    +
Sbjct  371  EVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTH  430

Query  441  SVQPSAPAVIFVICILLFSSVISTFVTRHQSSTLFAVLYLWLVRVGEARRKSVESHPSYL  500
            +  P++ +VI+ + IL+F+S++S  V+RH+ S  FAVLY+WLV +GEAR K++ESHP+YL
Sbjct  431  ATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYL  490

Query  501  KHYV  504
            K Y+
Sbjct  491  KKYL  494

56) ndhF1 in NC_018877


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  396 bits (1490),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 249/482 (52%), Positives = 381/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARVPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDHSYRKYFALFTFTTGVSSVAWLSDDLRLMLICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GDH YR YF+LFT  T+ +S+AW+S+DLRLM +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQVTGQWQLTSVLTNENVALHGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   +L     
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  RTGINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGVVNQSNEKMSNLWSIVGRVLGLFIAITFWFMTSGEGYQL  382
            LHG+FKATLFLQ+GS V+RF + +Q++ K +  W ++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDIYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVISTFVTRHQSSTLFAVLYLWLVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++S  V+RH+ S  FAVLY+WLV +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

57) CT43_CH3107 in NC_017208


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  396 bits (1490),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 249/482 (52%), Positives = 381/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARVPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDHSYRKYFALFTFTTGVSSVAWLSDDLRLMLICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GDH YR YF+LFT  T+ +S+AW+S+DLRLM +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQVTGQWQLTSVLTNENVALHGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   +L     
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  RTGINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGVVNQSNEKMSNLWSIVGRVLGLFIAITFWFMTSGEGYQL  382
            LHG+FKATLFLQ+GS V+RF + +Q++ K +  W ++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDIYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVISTFVTRHQSSTLFAVLYLWLVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++S  V+RH+ S  FAVLY+WLV +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

58) H175_ch3160 in NC_020376


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  396 bits (1490),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 249/482 (52%), Positives = 381/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARVPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDHSYRKYFALFTFTTGVSSVAWLSDDLRLMLICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GDH YR YF+LFT  T+ +S+AW+S+DLRLM +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQVTGQWQLTSVLTNENVALHGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   +L     
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  RTGINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGVVNQSNEKMSNLWSIVGRVLGLFIAITFWFMTSGEGYQL  382
            LHG+FKATLFLQ+GS V+RF + +Q++ K +  W ++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDIYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVISTFVTRHQSSTLFAVLYLWLVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++S  V+RH+ S  FAVLY+WLV +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

59) BCAH187_A3198 in NC_011658


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  391 bits (1472),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 247/482 (52%), Positives = 381/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvNHNGDRVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFDGVKQSNEKMSNLWIMFGRVLGLFIAIAFWFMTSGEGYEL  382
            LHG+FKATLFLQ+GS V+RF+  KQ++ K +  WI+ GRVL++++A+ FW  +   +YE+
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLSGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++S  ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLFAVLYLWLVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S  FAVLY+WLV +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

60) BCN_2999 in NC_016771


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  391 bits (1472),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 247/482 (52%), Positives = 381/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvNHNGDRVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFDGVKQSNEKMSNLWIMFGRVLGLFIAIAFWFMTSGEGYEL  382
            LHG+FKATLFLQ+GS V+RF+  KQ++ K +  WI+ GRVL++++A+ FW  +   +YE+
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLSGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++S  ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLFAVLYLWLVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S  FAVLY+WLV +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

61) ndhF in NC_011969


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  391 bits (1472),  Expect = 4e-110, Method: Compositional matrix adjust.
 Identities = 247/482 (52%), Positives = 381/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvNHNGDRVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFDGVKQSNEKMSNLWIMFGRVLGLFIAIAFWFMTSGEGYEL  382
            LHG+FKATLFLQ+GS V+RF+  KQ++ K +  WI+ GRVL++++A+ FW  +   +YE+
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLSGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++S  ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLFAVLYLWLVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S  FAVLY+WLV +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

62) HD73_2816 in NC_020238


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  391 bits (1469),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 248/482 (52%), Positives = 379/482 (79%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARIPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFVLFTFTTGVSSVAWLSDDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQVTGQWQLTSVLTNENVALHGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   +L     
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  RTGINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGVVNQSNEKMSNLWIRVGRVLGLFIAITFWFMTSGEGYQL  382
            LHG+FKATLFLQ+GS V+RF + +Q++ K +  WI +GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGVIVLIGFSLIYFTVHNSLYKWLHTDIYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVTSTFVTRHQSSTLFAVLYLWLVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S+ S  V+RH+ S  FAVLY+WLV +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

63) BATR1942_19550 in NC_014639


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  389 bits (1463),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 259/489 (53%), Positives = 383/489 (79%), Gaps = 7/489 (1%)

Query  16   IMLIASGISGLLFLHPRVPLSFVRIHIGILALPPLVSLVILANRSVNGNVGPWHFDSLAW  75
            I LI + ISGLLFL P +P+ ++++H+ IL +P L +++ +     +  +GP  +D L+W
Sbjct  13   IALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSW  72

Query  76   LMTFFVLAIGLIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASVAWLSGDLRLMVIFWGAT  135
            L++ FV+A+G+IIQ+FS+RYL+GD+ YR YF LFT  T+ AS+AW+S DLRLM + WG T
Sbjct  73   LLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMT  132

Query  136  LVGLILLIRLNSAWQVASEAAKVTGRLFLVSWFSLFFAIVWLFQATGQWQLSLVLTNESL  195
            L+ L LL+ +N  W+V+ E+AK+++  FL +W+++  AIV ++ ATG+W+++  +++ + 
Sbjct  133  LLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPT-  191

Query  196  AQLGGWEKTGINLLIVLAVIIPAAQWPFQRWLIESIVAPTPVSAIMHAGLVNAGGIILAR  255
                 W     N+L+VLAV+IPAAQ PF+RWLIES+ APTPVSAIMHAG+VNAGG+IL+R
Sbjct  192  -----WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTR  245

Query  256  FSPLFNGGiasiillmlasisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCalgayi  315
            F+P+F+ G+A  +LL+L+SISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y 
Sbjct  246  FAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYS  305

Query  316  aaiihlilhglFKATLFLQAGSAVRRHEGSARANEGTSYLWIIAGRILSLVIGIAFWLVA  375
            AAIIHLILHG+FKATLFLQ+GS V+R + + +A+   +Y WI+ GR+L++++++ FW+ +
Sbjct  306  AAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSS  365

Query  376  PGEGYQLISALILGWSLSVSWTQLVAFGEGRMGRIAGLTFLGGAALVYFMIHNLFYDWLH  435
               +Y+++SALIL+WSL VSW Q+VAF+ GRM+R+ G+ +++  +++Y++ HN FYD L+
Sbjct  366  DRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQ  425

Query  436  TTIFQSVQPPMSAVIIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKTVEN  495
                ++  PP  +VII V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++E+
Sbjct  426  NITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIES  485

Query  496  HPDYLKQYL  504
            HP+YLK+YL
Sbjct  486  HPNYLKKYL  494

64) BTF1_13250 in NC_018508


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  385 bits (1447),  Expect = 4e-108, Method: Compositional matrix adjust.
 Identities = 249/482 (52%), Positives = 383/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARIPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDHSYRKYFALFTFTTGVSSVAWLSDDLRLMLICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GDH YR YF+LFT  T+ +S+AW+S+DLRLM +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQGTGQWQLTSILTNENVALHGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++ +TG+W++   +++   +L     
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  RTGINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisiligtgislVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSIS+L+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGAVKQSNEKISDLWIMVGRVFGLFIAIAFWFTTSGEGYEL  382
            LHG+FKATLFLQ+GS V+RF   KQ++ K +  WI++GRV+++++A+ FW ++   +YE+
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSAFILGWSLYFSWKQLVVFGEGRMGRIVGVFILAGFSLIYFTVHNSFYKWLHTDMYQSV  442
            +SA+IL+WSL  SW+Q+V F+ GRM+R+VG+++++  ++IY+  HN FY  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSAISTFVTRNQSSTLFAVLYLWLVRVGEARRKSVESHPGYLKH  502
             P++ +VI+ + IL+F+S +S  V+R++ S  FAVLY+WLV +GEAR K++ESHP YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

65) BAA_3233 in NC_012659


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 241/480 (51%), Positives = 377/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

66) ndhF in NC_007530


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 241/480 (51%), Positives = 377/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

67) ndhF in NC_003997


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 241/480 (51%), Positives = 377/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

68) BAMEG_1428 in NC_012581


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 241/480 (51%), Positives = 377/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

69) H9401_3037 in NC_017729


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 241/480 (51%), Positives = 377/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

70) BAS2959 in NC_005945


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 241/480 (51%), Positives = 377/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

71) BCAH820_3190 in NC_011773


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  381 bits (1431),  Expect = 8e-107, Method: Compositional matrix adjust.
 Identities = 241/480 (51%), Positives = 377/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

72) BCG9842_B2072 in NC_011772


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  379 bits (1425),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 245/482 (51%), Positives = 382/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvNHNEDRVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   + ++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSIRYLLGDRSYRKYFALFTFTTGVSSVAWLSNDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYLLGD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISSYLFTISWIALLSAIIWLFQGTGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+SS  F  +W+A+++AI+ ++ +TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisiligtgislVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSIS+L+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGAVKQSNEKISDLWIMVGRVFGLFIAIAFWFTTSGEGYEL  382
            LHG+FKATLFLQ+GS V+RF   KQ++ K +  WI++GRV+++++A+ FW ++   +YE+
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSAFILGWSLYFSWKQLVVFGEGRMGRIVGVVILAGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SA+IL+WSL  SW+Q+V F+ GRM+R+VG+++++  ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSAISTFVTRNQSSTLFAVLYLWLVRVGEARRKSVESHPGYLKH  502
             P++ +VI+ + IL+F+S +S  V+R++ S  FAVLY+WLV +GEAR K++ESHP YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

73) ndhF in NC_006274


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  379 bits (1424),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 239/480 (50%), Positives = 376/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvNHNGDSVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G+ V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLLVIIWLFQITGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A++  I+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVEYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQV+YKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVGVVKQSNEKISNLWIMVGRVFGLFIAIAFWFTTSGEGYQF  382
            LHG+FKATLFLQ+GS V+R  + KQ++ K +  WI++GRV+++++A+ FW ++   +Y+ 
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSAFILGWSLYFSWKQLVVFGEGRMGRIAGLIVLSGFSLIYFTVHNSLYKWLHTDMYQNA  442
            +SA+IL+WSL  SW+Q+V F+ GRM+R+ G+I++S  ++IY+  HN +Y  L+    + +
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSASAVIFVISLLLFGSAISTLVTRNQSSTIFAVMYLWFVRVGEARQKSVESHPSYLKH  502
             P++ +VI+ + +L+FGS +S  V+R++ S  FAV+Y+W+V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

74) BTG_03510 in NC_018500


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  377 bits (1418),  Expect = 8e-106, Method: Compositional matrix adjust.
 Identities = 245/482 (51%), Positives = 381/482 (80%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvNHNEDRVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   + ++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSIRYLLGDRSYRKYFALFTFTTGVSSVAWLSNDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYLLGD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISSYLFTISWIALLSAIIWLFQGTGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+SS  F  +W+A+++AI+ ++ +TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisiligtgislVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSIS+L+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGAVKQSNEKISDLWIMVGRVFGLFIAITFWFMTSGEGYQL  382
            LHG+FKATLFLQ+GS V+RF   KQ++ K +  WI++GRV+++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIVGVFILAGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+VG+++++  ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSAISTFVTRNQSSTLFAVLYLWLVRVGEARRKSVESHPGYLKH  502
             P++ +VI+ + IL+F+S +S  V+R++ S  FAVLY+WLV +GEAR K++ESHP YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

75) SSP2380 in NC_007350


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  371 bits (1395),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 245/472 (52%), Positives = 371/472 (79%), Gaps = 7/472 (1%)

Query  33   IPVAYVRIHICIVALPPLLAFIGLLFTSNQVEAGLWYLDILAWLMAFFVLFIGLIIQRYC  92
            +P+ Y+++H+ I+ +P L+A IG++    Q   G   +D L+WL+A FV+ +G+IIQ++ 
Sbjct  30   MPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQKFS  89

Query  93   IRYLAGDRSYRKYFMLFTLTTSFAAMAWLTGDIRIMVISWGCtligltllisltsAWRVT  152
            +RYL GD+ YR YF LFT  TSFA++AW++ D+R+M + WG TL+ LTLL+++   W+V 
Sbjct  90   MRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWKVP  149

Query  153  RAAAIVTGKLFFLGWIALAIAVVWIGLITGEWHYTAIFTESNLAQINAWSKFGINILIIL  212
            R +A +++  F+ GW+A+  A+V I + TGEW+        ++A+  +WS +  N+L++L
Sbjct  150  RESAKLSSMTFLCGWLAFVGAIVSIYIATGEWR-----VPQHIAH-PTWSLLT-NVLLVL  202

Query  213  AVMVPAAQWPFQRWLIESVAAPTPVSAIMHAGIVNAGGIMLTRFSPLFNGDIATMVLLVF  272
            AVM+PAAQ PF+RWLIESV+APTPVSAIMHAGIVNAGG++LTRF+P+F+ ++A  +LL++
Sbjct  203  AVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLLIL  262

Query  273  ASVSVLIGAGISLVHVDYKRLLVGSTIGQMGFMLIQCALGAYIPAIIHLILHGLFKATLF  332
            +S+SVL+G+GISLV+VDYKR LVGST++QMGFML+QCALG Y +AIIHLILHG+FKATLF
Sbjct  263  SSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLF  322

Query  333  LRSGSAVRHFNVPSRVNERMSYlwiligrglaiaiglgFWLSAPEQGYRLVSGLILAWSL  392
            L+SGS V++FN+P + + + +Y WI++GR LAI +++ FW+S+   +Y ++S+LILAWSL
Sbjct  323  LQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAWSL  382

Query  393  SVSWTQLVAFGEGRFGRMMGLFVLIVVGAVYYIVHHFFSGALHTITFHSAQPPMFavviv  452
             VSW Q+VAF+ GR +R++G++++ +V  +Y I H++F + L+ IT H++ PP ++V+I 
Sbjct  383  LVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPPTISVIIS  442

Query  453  avlllFGSLMSTWVARNRSSKAFSILYMWIVRLGDAKLESVERHPNYLKSYL  504
             V+L+FGSL+S WVAR+R SK+F++LY+W+V LG+A+  ++E HPNYLK YL
Sbjct  443  VVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKKYL  494

76) ndhF in NC_014479


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  371 bits (1393),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 256/482 (54%), Positives = 376/482 (79%), Gaps = 7/482 (1%)

Query  23   ISGLLFLHPRVPLGYIRIHIGILALPPLVSLVNLANKSVEGNVGPWYFDSLAWLMTFFVL  82
            ISGLLFL P +P+ YI++H+ IL +P L +++ +     +  +GP  +D L+WL++ FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASIAWLSGDLRLMVIFWGATLVGLTLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF LFT  T+ AS+AW+S DLRLM + WG TL+ LTLL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IRLNSAWQVASEAAKVSGRlfllswfslffAMIWLFQVTGQWQLSLVLTNESLAQLGGWE  202
            + +N  W+V+ E+AK+S+  FL +W+++  A++ ++  TG+W+++  +++ +      W 
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPT------WS  193

Query  203  RTGINLLIVLAVIIPAAQWPFQRWLIESIVAPTPVSAIMHAGLVNAGGIILARFSPLFNG  262
                N+L+VLAV+IPAAQ PF+RWLIES+ APTPVSAIMHAG+VNAGG+IL+RF+P+F+ 
Sbjct  194  LLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  GiasiillmlasisvliGTGISLVQVDYKRQLVGSTIGQMGFMLIQCalgayiaaiihli  322
            G+A  +LL+L+SISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AAIIHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  lhglFKATLFLQAGSAVRRHEGSARANEGTSYLWIMAGRILSLVIGVAFWLVAPGEGYQF  382
            LHG+FKATLFLQ+GS V+R + + +A+   +Y WI+ GR+L+++++  FW+ +   +Y+ 
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  ISALILGWSLSVSWTQLVAFGEGRIGRIAGLTFLGGGAFVYFIIHNLFYKWLHTSVFQSV  442
            +SALIL+WSL VSW Q+VAF+ GR++R+ G+ +++  +F+Y+I HN FY  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPPMSAVIIVVCLLLFGSALGTWVARHRSSVLFAVLYLWLVRLGEAKPKTVESHPDYLKQ  502
             PP  +VII V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++ESHP+YLK+
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  FL  504
            +L
Sbjct  493  YL  494

77) BCK_19215 in NC_018491


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  369 bits (1387),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 239/482 (50%), Positives = 380/482 (79%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARIPLRFVHIHIGIaalpslvsllalvNHNGDSVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G+ V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSIRYLLGDRSYRKYFALFTFTTGVSSVAWLSNDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYLLGD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISwiallaaiiwlFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGEVKQSNEKMSNLWMIVGRVFGLFIVIAFWFTTSGEGYQF  382
            LHG+FKATLFLQ+GS V+RF   KQ++ K +  W+++GRV+++++ + FW ++   +Y+ 
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSAFVLGWSLYFSWKQLVVFGEGRMGRIVGLFILAGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SA++L+WSL  SW+Q+V F+ GRM+R+VG+++++  ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICLLLFGSAISTLVTRNQSSTIFAVMYLWFVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + +L+FGS +S  V+R++ S  FAV+Y+W+V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

78) BCA_3215 in NC_012472


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  368 bits (1382),  Expect = 6e-103, Method: Compositional matrix adjust.
 Identities = 242/480 (51%), Positives = 377/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvNHNGDRVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSIRYLLGDRSYRKYFALFTCTTGVSSVAWLSNDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYLLGD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKPSSYLFTISwiallaailwlFQVTGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K SS  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNEKMSNLWMIVGRVLGLFIAIAFWFTTSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW ++   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYESV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

79) bcf_15530 in NC_016779


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  367 bits (1381),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 242/482 (51%), Positives = 377/482 (79%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvNHNGDRVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSIRYLLGDRSYRKYFALFTCTTGVSSVAWLSNDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYLLGD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKTSSYLFTISwiallaailwlFQVTGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K SS  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVGAVKLSNEKISNLWIMIGRVFGLFIAIAFWFTTSGEGYQF  382
            LHG+FKATLFLQ+GS V+R    K ++ K +  WI++GRV+++++A+ FW ++   +Y+ 
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSAFILGWSLYVSWKQLVVFGEGRMGRIVGVFILAGFSLIYFTVHNSLYKWLHTDMYQNV  442
            +SA+IL+WSL VSW+Q+V F+ GRM+R+VG+++++  ++IY+  HN +Y  L+    +  
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSPSAVIFVICLLLFGSAIRTLVTRNQSSTLFAVMYLWFVRVGEARQKSVESHPSYLKH  502
             P+  +VI+ + +L+FGS +   V+R++ S  FAV+Y+W+V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

80) ndhF in NC_003909


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  367 bits (1381),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 238/482 (50%), Positives = 380/482 (79%), Gaps = 7/482 (1%)

Query  23   LSGLLFLHARIPLRFVHIHIGIaalpslvsllalvNHNGDSVVGPWHLDTLAWFMSFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G+ V+GP  +D L+W+++ FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSIRYLLGDRSYRKYFALFTFTTGVSSVAWLSNDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYLLGD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISSYLFTISwiallaaiiwlFQITGQWQLTSVVTNENVAQFGTLE  202
            + +N+ WKV  E++K+SS  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLFIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+++++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGEVKQSNEKMSNLWMIVGRVFGLFIVIAFWFTTSGEGYQF  382
            LHG+FKATLFLQ+GS V+RF   KQ++ K +  W+++GRV+++++ + FW ++   +Y+ 
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSAFVLGWSLYFSWKQLVVFGEGRMGRIVGLFILAGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SA++L+WSL  SW+Q+V F+ GRM+R+VG+++++  ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICLLLFGSAISTLVTRNQSSTIFAVMYLWFVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + +L+FGS +S  V+R++ S  FAV+Y+W+V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  503  YV  504
            Y+
Sbjct  493  YL  494

81) ndhF in NC_014335


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  365 bits (1372),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 242/480 (51%), Positives = 376/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTiswialllaiiwlFQITGQWQLTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A++ AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFTLIYFTVHNSLYKWLHTDMYESV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   T+IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPTVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

82) ndhF in NC_005957


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  365 bits (1372),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 241/480 (51%), Positives = 375/480 (79%), Gaps = 7/480 (1%)

Query  23   LSGLLFLHARMPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + MP+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRFMIMCWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTiswialllaiiwlFQITGQWQVTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+S+  F  +W+A++ AI+ ++  TG+W+V   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRVEVVKQSNKKMSNLWMIVGRVLGLFIAIAFWFITSGEGYQL  382
            LHG+FKATLFLQ+GS V+R ++ KQ++ K +  W+++GRVL++++A+ FW  +   +Y++
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSALILGWSLYFSWKQLVVFGEGRMGRIAGLIVLIGFSLIYFTVHNSLYKWLHTDMYQSV  442
            +SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++ 
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSAPAVIFVICTLLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPSYLKH  502
             P++ +VI+ +  L+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

83) ndhF in NC_008600


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  364 bits (1369),  Expect = 6e-102, Method: Compositional matrix adjust.
 Identities = 241/482 (50%), Positives = 376/482 (79%), Gaps = 7/482 (1%)

Query  25   LSGLLFLHARMPLRFVHIYIGIaalpslvsllalvNHNGDRVVGPWHLDTLAWFMAFFVL  84
            +SGLLFL + MP+R++ + + I  +P L +++++   +G++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  85   TIGLIIQRFSIRYLLGDRSYRKYFALFTCTTGVSSVAWLSNDLRFMIICWGATLIGLVLL  144
            ++G+IIQ+FS+RYLLGD+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  145  IGLNKGWKVVSEATKTSSYLFTISwiallaailwlFQVTGQWQLTSVLTNENVAQFGTLE  204
            + +N+ WKV  E++K SS  F  +W+A+++AI+ ++  TG+W++   +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  205  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  264
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  265  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCALGAYLAAVIHLI  324
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  325  LHGLFKATLFLQAGSSVQRVGAVKLSNEKISNLWIMIGRVFGLFIAIAFWFTTSGEGYQF  384
            LHG+FKATLFLQ+GS V+R    K ++ K +  WI++GRV+++++A+ FW ++   +Y+ 
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  385  VSAFILGWSLYVSWKQLVVFGEGRMGRIVGVFILAGFSLIYFTVHNSLYKWLHTDMYQNV  444
            +SA+IL+WSL VSW+Q+V F+ GRM+R+VG+++++  ++IY+  HN +Y  L+    +  
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  445  QPSPSAVIFVICLLLFGSAIRTLVTRNQSSTLFAVMYLWFVRVGEARQKSVESHPSYLKH  504
             P+  +VI+ + +L+FGS +   V+R++ S  FAV+Y+W+V +GEAR K++ESHP+YLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

Query  505  YV  506
            Y+
Sbjct  493  YL  494

84) MY9_0188 in NC_017743


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  362 bits (1360),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 259/491 (53%), Positives = 386/491 (79%), Gaps = 7/491 (1%)

Query  14   FFIMLIASGISGLLFLHPRVPLSFVRIHigilalpllvallilaNSSVSGNVGPWHLDTL  73
            F I LI + ISGLLFL P +P+ ++++H+ IL +P+L A++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFALFTFTTGAASMTWLSGDLRLMVLFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF+LFT  T+ AS++W+S DLRLM L WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMMWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A++ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAGLGEWERTGIQLLIVLAVIIPAGQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W     ++L+VLAV+IPA+Q PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllagisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L++ISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVQRHEVSTRVKERSSYLWLVAGRTLALVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V+R +++ +   + +Y W+V GR LA++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  TAPGDGYQLMSALILGWSLSVSWTQLVAFGEGRIGRIAGLIVLGGAAFIYFIIHNLFYDW  433
            ++   +Y+++SALIL+WSL VSW Q+VAF+ GR++R+ G+I+++  +FIY+I HN FYD 
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHAAVSQTVQPPMPAVIIVVCLFLFGSALGSWVARHRSSAFFTILYLWLVRLGEAKPKSV  493
            L+   +++  PP  +VII V +++FGS L+ WVARHR S  F++LY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYL  504
            ESHP+YLK+YL
Sbjct  484  ESHPNYLKKYL  494

85) YBT020_15730 in NC_017200


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  362 bits (1360),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 242/480 (51%), Positives = 374/480 (78%), Gaps = 7/480 (1%)

Query  23   LSGLLFLNTRIPLRFVYIHIGIaalpslvsllalvNHNGDRVVGPWHLDTLAWFMAFFVL  82
            +SGLLFL   +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+W++A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLLRDRSYRKYFALFTCTTGVSSVAWLSNDLRFMIICWGATLIGLVLL  142
            ++G+IIQ+FS+RYLL D+ YR YF+LFT  T+ +S+AW+S+DLR+M +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISSYLFTISwiallaaiiwlFQVTGQWQFTSVLTNENVAQFGTLE  202
            + +N+ WKV  E++K+SS  F  +W+A+++AI+ ++  TG+W+    +++   + +    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLLT---  196

Query  203  KTGINLLIIVAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFHD  262
                N+L+++AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++
Sbjct  197  ----NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDN  252

Query  263  DIAQiillifssisvliGTGISLVQVDYKRQLVGSTIAQMGFMFIQCALGAYVAAVIHLI  322
            ++A  +LLI+SSISVL+G+GISLVQVDYKRQLVGST++QMGFM++QCALG Y AA+IHLI
Sbjct  253  GFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLI  312

Query  323  LHGLFKATLFLQAGSSVQRFGAVKQSNEKISNLWIMVGRVFGLFIAVAFWFTTSGEGYEF  382
            LHG+FKATLFLQ+GS V+RF   KQ++ K +  WI++GRV+++++A  FW ++   +YE 
Sbjct  313  LHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEV  372

Query  383  VSAFILGWSLYVSWKQLVVFGEGRMGRIVGVFILAGFSLIYFTVHNSLYKWLHTDMYQNV  442
            +SA+IL+WSL VSW+Q+V F+ GRM+R+VG+++++  ++IY+  HN +Y  L+    +  
Sbjct  373  LSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHAT  432

Query  443  QPSASAVIFVICILLFSSVICTFVTRNQSSTLSAVLYLWSVRVGEARRKSVESHPNYLKH  502
             P++ +VI+ + IL+F+S++   V+R++ S   AVLY+W V +GEAR K++ESHPNYLK 
Sbjct  433  TPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKK  492

86) BCB4264_A3176 in NC_011725


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 249/483 (52%), Positives = 382/483 (80%), Gaps = 9/483 (1%)

Query  23   LSGLLFLNARIPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTCTTGVSSVAWLSDDLRLMLICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLRLM +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQITGQWQLTSVLTNEN-VVLHGTL  201
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++    +L    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLL----  195

Query  202  ERTGINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFH  261
                 N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F+
Sbjct  196  ----TNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFD  251

Query  262  DDIAQiillifssisiligtgislVQVDYKRQLVGSTIAQMGFMLIQCalgaylaaiihl  321
            +++A  +LLI+SSIS+L+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AAIIHL
Sbjct  252  NGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  311

Query  322  ilhglFKATLFLQAGSSVQRFGVVNQSNEKMSNLWIIVGRVLGLFIAITFWFMTSGEGYQ  381
            ILHG+FKATLFLQ+GS V+RF + +Q++ K +  WI++GRVL++++A+ FW  +   +Y+
Sbjct  312  ILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYE  371

Query  382  LVSALILGWSLYFSWKQLVVFGEGRMGRIAGVIVLIGFSLIYFTVHNSLYKWLHTDIYQS  441
            ++SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++
Sbjct  372  VLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHA  431

Query  442  VQPSAPAVIFVICILLFSSVISTFVTRHQSSTLFAVLYLWLVRVGEARRKSVESHPSYLK  501
              P++ +VI+ + IL+F+S++S  V+RH+ S  FAVLY+WLV +GEAR K++ESHP+YLK
Sbjct  432  TTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLK  491

Query  502  HYV  504
             Y+
Sbjct  492  KYL  494

87) BC3142 in NC_004722


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  359 bits (1349),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 249/483 (52%), Positives = 382/483 (80%), Gaps = 9/483 (1%)

Query  23   LSGLLFLNARIPLRFVHIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRLMLICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLRLM +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQVTGQWQLTSVLTNEN-VVLHGTL  201
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++    +L    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLL----  195

Query  202  ERTGINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFH  261
                 N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F+
Sbjct  196  ----TNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFD  251

Query  262  DDIAQiillifssisiligtgislVQVDYKRQLVGSTIAQMGFMLIQCalgaylaaiihl  321
            +++A  +LLI+SSIS+L+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AAIIHL
Sbjct  252  NGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  311

Query  322  ilhglFKATLFLQAGSSVQRFGVVNQSNEKMSNLWIIVGRVLGLFIAITFWFMTSGEGYQ  381
            ILHG+FKATLFLQ+GS V+RF + +Q++ K +  WI++GRVL++++A+ FW  +   +Y+
Sbjct  312  ILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYE  371

Query  382  LVSALILGWSLYFSWKQLVVFGEGRMGRIAGVIVLIGFSLIYFTVHNSLYKWLHTDIYQS  441
            ++SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++
Sbjct  372  VLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHA  431

Query  442  VQPSAPAVIFVICILLFSSVISTFVTRHQSSTLFAVLYLWLVRVGEARRKSVESHPSYLK  501
              P++ +VI+ + IL+F+S++S  V+RH+ S  FAVLY+WLV +GEAR K++ESHP+YLK
Sbjct  432  TTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLK  491

Query  502  HYV  504
             Y+
Sbjct  492  KYL  494

88) BMB171_C2855 in NC_014171


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  357 bits (1340),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 249/483 (52%), Positives = 382/483 (80%), Gaps = 9/483 (1%)

Query  23   LSGLLFLNARIPLRFVYIHIGIaalpslvsllalvnnnGDRVVGPWHLDTLAWLMAFFVL  82
            +SGLLFL + +P+R++ +H+ I  +P L +++++   +G++V+GP  +D L+WL+A FV+
Sbjct  20   ISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVM  79

Query  83   TIGLIIQRFSVRYLMGDRSYRKYFALFTFTTGVSSVAWLSDDLRLMLICWGATLIGLVLL  142
            ++G+IIQ+FS+RYL+GD+ YR YF+LFT  T+ +S+AW+S+DLRLM +CWG TL+ L LL
Sbjct  80   ALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLL  139

Query  143  IGLNKGWKVVSEATKISGYLFTISWIALLSAIIWLFQVTGQWQLTSVLTNEN-VVLHGTL  201
            + +N+ WKV  E++K+S+  F  +W+A+++AI+ ++  TG+W++   +++    +L    
Sbjct  140  MNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPTWSLL----  195

Query  202  ERTGINLLIILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIMLTRFSPLFH  261
                 N+L++LAVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F+
Sbjct  196  ----TNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFD  251

Query  262  DDIAQiillifssisiligtgislVQVDYKRQLVGSTIAQMGFMLIQCalgaylaaiihl  321
            +++A  +LLI+SSIS+L+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AAIIHL
Sbjct  252  NGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHL  311

Query  322  ilhglFKATLFLQAGSSVQRFGVVNQSNEKMSNLWIIVGRVLGLFIAITFWFMTSGEGYQ  381
            ILHG+FKATLFLQ+GS V+RF + +Q++ K +  WI++GRVL++++A+ FW  +   +Y+
Sbjct  312  ILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYE  371

Query  382  LVSALILGWSLYFSWKQLVVFGEGRMGRIAGVIVLIGFSLIYFTVHNSLYKWLHTDIYQS  441
            ++SALIL+WSL  SW+Q+V F+ GRM+R+ G+I++   ++IY+  HN +Y  L+    ++
Sbjct  372  VLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHA  431

Query  442  VQPSAPAVIFVICILLFSSVISTFVTRHQSSTLFAVLYLWLVRVGEARRKSVESHPSYLK  501
              P++ +VI+ + IL+F+S++S  V+RH+ S  FAVLY+WLV +GEAR K++ESHP+YLK
Sbjct  432  TTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLK  491

Query  502  HYV  504
             Y+
Sbjct  492  KYL  494

89) GYO_0376 in NC_016047


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  354 bits (1331),  Expect = 6e-99, Method: Compositional matrix adjust.
 Identities = 259/491 (53%), Positives = 380/491 (78%), Gaps = 7/491 (1%)

Query  14   FFIMLIASGISGLLFLHPRVPLRFVRIHIGilalpllvslvilaNRSVNGNIGPWHLDSL  73
            F I LI + ISGLLFL P +P+R++++H+ IL +P+L +++ +     +  +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   AWLMTFFVLAIGLIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASLAWLSGDLRLMVIFWG  133
            +WL++ FV+A+G+IIQ+FS+RYL+GD+ YR YF LFT  T+ ASLAW+S DLRLM + WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLAGLTLLIRLNSAWQVASEAAKVSGRlfllswfslflAIMWLFYATGQWQLSSVLTNE  193
             TL  LTLL+ +N  W+V+ E+AK+S+  FL +W+++  AI+ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAELGEWKRTGIQLLIVLAVIIPAAQWPFQRWLIESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W     ++L+VLAV+IPAAQ PF+RWLIES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  ARFSPLFNggiasiillllasmsvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            +RF+P+F+ G+A  +LL+L+S+SVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEGLTRANKGTSYLWIMAGWILSLAIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R +   +A+   +Y WI+ G++L++ ++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  VAPGEGYQFISALILGWSLSVSWTQLVAFGEGRIGRIAGLTFLGGAAFVYFIIHNLFYKW  433
             +   +Y+ +SALIL+WSL VSW Q+VAF+ GR++R+ G+ +++  +F+Y+I HN FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTVFQSVQPPMPAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

90) ndhF in NC_000964


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  352 bits (1323),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 253/491 (52%), Positives = 385/491 (79%), Gaps = 7/491 (1%)

Query  14   FFIMLMASGISGLLFLHPRVPLSFVRIHigilalpllvsllilANSGVSGNVGPWHLDSL  73
            F I L+ + ISGLLFL P +P+ ++++H+ IL +P+L +++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF LFT  T+ AS++W+S DLRLM L WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMMWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A++ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W     ++L+VLAV+IPAAQ PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllasisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L+SISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEVSTRTNERTSYLWVMAGRILSLVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R +++ +++ + +Y W++ GR+L+++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  TAPGDGYHLISALILGWSLSVSWDQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKW  433
            ++   +Y+++SALIL+WSL VSW+Q+VAF+ GR++R+ G+ +++  +++Y+I H+ FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

91) ndhF in NC_020507


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  352 bits (1323),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 253/491 (52%), Positives = 385/491 (79%), Gaps = 7/491 (1%)

Query  14   FFIMLMASGISGLLFLHPRVPLSFVRIHigilalpllvsllilANSGVSGNVGPWHLDSL  73
            F I L+ + ISGLLFL P +P+ ++++H+ IL +P+L +++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF LFT  T+ AS++W+S DLRLM L WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMMWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A++ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W     ++L+VLAV+IPAAQ PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllasisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L+SISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEVSTRTNERTSYLWVMAGRILSLVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R +++ +++ + +Y W++ GR+L+++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  TAPGDGYHLISALILGWSLSVSWDQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKW  433
            ++   +Y+++SALIL+WSL VSW+Q+VAF+ GR++R+ G+ +++  +++Y+I H+ FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

92) ndhF in NC_018520


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  352 bits (1323),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 253/491 (52%), Positives = 385/491 (79%), Gaps = 7/491 (1%)

Query  14   FFIMLMASGISGLLFLHPRVPLSFVRIHigilalpllvsllilANSGVSGNVGPWHLDSL  73
            F I L+ + ISGLLFL P +P+ ++++H+ IL +P+L +++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF LFT  T+ AS++W+S DLRLM L WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMMWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A++ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W     ++L+VLAV+IPAAQ PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllasisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L+SISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEVSTRTNERTSYLWVMAGRILSLVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R +++ +++ + +Y W++ GR+L+++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  TAPGDGYHLISALILGWSLSVSWDQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKW  433
            ++   +Y+++SALIL+WSL VSW+Q+VAF+ GR++R+ G+ +++  +++Y+I H+ FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

93) BSn5_12510 in NC_014976


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  352 bits (1321),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 251/491 (52%), Positives = 383/491 (79%), Gaps = 7/491 (1%)

Query  14   FFIMLMASGISGLLFLHPRVPLSFVRIHIGTlalpllvsllilANSGVSGNVGPWHLDSL  73
            F I L+ + ISGLLFL P +P+ ++++H+  L +P+L +++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF LFT  T+ AS++W+S DLRLM L WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMMWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A++ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W     ++L+VLAV+IPAAQ PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllagisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L++ISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEVSARTNERTSYLWVMAGRILSLVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R +++ +++ + +Y W++ GR+L+++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  TAPGDGYHLISALILGWSLSVSWTQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKW  433
            ++   +Y+++SALIL+WSL VSW Q+VAF+ GR++R+ G+ +++  +++Y+I H+ FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

94) A7A1_3299 in NC_019896


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  352 bits (1321),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 251/491 (52%), Positives = 385/491 (79%), Gaps = 7/491 (1%)

Query  14   FFIMLMASGISGLLFLHPRVPLSFVRIHigilalpllvsllilANSGVSGNVGPWHLDSL  73
            F I L+ + ISGLLFL P +P+ ++++H+ IL +P+L +++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFALFTFTTGAASMTWLSGDLRLMVLFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF+LFT  T+ AS++W+S DLRLM L WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMMWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A++ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SIAGLGEWERTGIQLLIVLAVIIPAGQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W     ++L+VLAV+IPA+Q PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllagisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L++ISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEVSARTNERTSYLWVMAGRILSLVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R +++ +++ + +Y W++ GR+L+++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  TAPGDGYHLISALILGWSLSVSWTQLVAFGEGRIGRIAGLTVLGGAALVYFIIHHLFYKW  433
            ++   +Y+++SALIL+WSL VSW Q+VAF+ GR++R+ G+ +++  +++Y+I H+ FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

95) I33_0230 in NC_017195


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  350 bits (1315),  Expect = 1e-97, Method: Compositional matrix adjust.
 Identities = 252/491 (52%), Positives = 383/491 (79%), Gaps = 7/491 (1%)

Query  14   FFIMLMASGISGLLFLHPRVPLSFVRIHigilalpllvsllilANSGVSGNVGPWHLDSL  73
            F I L+ + ISGLLFL P +P+ ++++H+ IL +P+L +++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVIFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF LFT  T+ AS++W+S DLRLM + WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMMWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A++ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAGLGEWERTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W     ++L+VLAV+IPAAQ PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllagisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L++ISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEVSARTNERTSYLWVMAGRILSLVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R +++ +++ + +Y W++ GR+L+++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  AAPGEGYQFISALILGWSLSVSWTQLVAFGEGRIGRIAGLTVLGGAALVYFIIHNLFYKW  433
            ++   +Y+ +SALIL+WSL VSW Q+VAF+ GR++R+ G+ +++  +++Y+I HN FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTVFQSIQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

96) I653_00920 in NC_020832


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  350 bits (1316),  Expect = 9e-98, Method: Compositional matrix adjust.
 Identities = 252/491 (52%), Positives = 384/491 (79%), Gaps = 7/491 (1%)

Query  14   FFIMLMASGISGLLFLHPRVPLSFVRIHigiltlpllvsllilANSGVSGNVGPWHLDSL  73
            F I L+ + ISGLLFL P +P+ ++++H+ IL +P+L +++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFMLFTFTTGAASMTWLSGDLRLMVIFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF LFT  T+ AS++W+S DLRLM + WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMMWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A++ ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAGLGEWERIGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W  +  ++L+VLAV+IPAAQ PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllagisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L++ISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEVSARTNERTSYIWVMAGRILSLVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R +++ +++ + +Y W++ GR+L+++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  AAPGEGYQFISALILGWSLSVSWTQLVAFGEGRIGRIAGLTVLGGAALVYFIIHNLFYKW  433
            ++   +Y+ +SALIL+WSL VSW Q+VAF+ GR++R+ G+ +++  +++Y+I HN FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARHRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVARHR S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

97) Bcer98_1106 in NC_009674


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  348 bits (1305),  Expect = 7e-97, Method: Compositional matrix adjust.
 Identities = 234/472 (50%), Positives = 367/472 (78%), Gaps = 7/472 (1%)

Query  33   IPLHFVRIHIGIAALPSFVSLLALIHTNVDGVIGPWHLDSLAWLMAFFVLTIGFIIQRFS  92
            +P++++++H+ I  +P + ++++++  + + V+GP  +D L+WL+A FV+++GFIIQ+FS
Sbjct  30   MPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQKFS  89

Query  93   LRYLMGDRSYRKYFILFTFTTGASSIAWLSNDLRLMVICWGVTlvgllllirlNSSWKVV  152
            +RYL+GD+ YR YF LFT  T+ +S+AW+S+DLRLM +CWG+TL+ L LL+ +N  WKV 
Sbjct  90   MRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWKVP  149

Query  153  SEATKISGRLFTISWVALLLAVIWLSQVTGQWQLTSVLGDESLAQYGKWEKAGINLLILL  212
             E++K+S+  F  +W+A++ A++ +   TG+W++   +++ +      W     N+L++L
Sbjct  150  RESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHPT------WSLLT-NVLLVL  202

Query  213  AVMIPAAQWPFQRWLIESAIAPTPVSAIMHAGLVNAGGIMLTRFSPLFHDDIAQiillif  272
            AVMIPAAQ PF+RWLIES  APTPVSAIMHAG+VNAGG++LTRF+P+F++++A  +LLI+
Sbjct  203  AVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLLIL  262

Query  273  ssisvliGTGISLVQVDYKRQLVGSTIAQMGFMLIQCalgaylaaiihlilhglFKATLF  332
            SSISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG Y AAIIHLILHG+FKATLF
Sbjct  263  SSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKATLF  322

Query  333  LQAGSSVRHFEVVKHSHEKASYLWimigrilglliaigFWLMTPKEGYQLVSALILGWSL  392
            LQ+GS V++F++ K++  K +Y WI++GR+L++++A+ FW+ + + +Y+++SALIL+WSL
Sbjct  323  LQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAWSL  382

Query  393  YFSWKQLVVFGEGKIGRIAGLSFLIGFSLIYFTVHTLFYEWLHTDVYQNVQPPVLAITFV  452
              SW+Q+V F+ G+++R+ G+ ++   ++IY+  H  FY+ L+    +   PP +++ + 
Sbjct  383  LVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPPTISVIIS  442

Query  453  ICLLLFGSAIVALVARNRSFTIFAILYLWLVRVGEANQKSVESHPNYLKHYV  504
            + +L+FGS +   VAR+R    FA+LY+WLV +GEA  K++ESHPNYLK Y+
Sbjct  443  VVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAIESHPNYLKKYL  494

98) ndhF in NC_017196


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  346 bits (1299),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 254/491 (52%), Positives = 381/491 (78%), Gaps = 7/491 (1%)

Query  14   FFIMLMASGISGLLFLHPRVPLSFVRIHigilalpllvsllilANSGVSGNVGPWHLDSL  73
            F I L+ + ISGLLFL P +P+ ++++H+ IL +P+L +++ +        +GP  +D L
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  74   ACLMTFFVLAIGFIIQRFSVRYLMGDRSYRKYFTLFTFTTGAASMTWLSGDLRLMVLFWG  133
            + L++ FV+A+GFIIQ+FS+RYL+GD+ YR YF LFT  T+ AS++W+S DLRLM L WG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  134  ATLVGLTLLIRLNSAWQVASEAAKISGRlfllswfslffAMTWLFHATGQWQLSLVVTNE  193
             TL+ LTLL+ +N  W+V+ E+AK+S+  FL +W+++  A+  ++ ATG+W+++  +++ 
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  194  SLAGLGEWGRTGIQLLIVLAVIIPAAQWPFQRWLVESIVAPTPVSAIMHAGLVNAGGIIL  253
            +      W+    ++L+VLAV+IPAAQ PF+RWL+ES+ APTPVSAIMHAG+VNAGG+IL
Sbjct  191  T------WSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  254  TRFSPLFHggiasiillllasisvligTGISLVQVDYKRQLVGSTIGQMGFMLIQCalga  313
            TRF+P+F+ G+A  +LL+L+SISVL+G+GISLVQVDYKRQLVGST++QMGFML+QCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  314  yiaaiihlilhglFKATLFLQAGSAVGRHEVLARTNERTSYLWVMAGRILSLVIGVAFWL  373
            Y AAIIHLILHG+FKATLFLQ+GS V R ++  +++ + +Y W++ GR+L+++++  FW+
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  374  AAPGEVYQFISALILGWSLSVSWNQLVAFGEGRIGRIAGLTVLGGAALVYFIIHNLFYKW  433
            ++    Y+ +SALIL+WSL VSWNQ+VAF+ GR++R+ G+ +++  +++Y+I HN FY  
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  434  LHTTIFQSVQPPMSAVMIVVCLLLFGSALGTWVARYRSSVFFAVLYLWLVRLGEAKPKSV  493
            L+    ++  PP  +V+I V +L+FGS L+ WVAR R S  FAVLY+WLV LGEA++K++
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  494  ESHPDYLKQYI  504
            ESHP+YLK+Y+
Sbjct  484  ESHPNYLKKYL  494

99) ndhF in NC_021362


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  293 bits (1096),  Expect = 2e-80, Method: Compositional matrix adjust.
 Identities = 190/445 (43%), Positives = 332/445 (75%), Gaps = 8/445 (1%)

Query  60   NPGQAGAPWRLDSLAWLIALFVLTIGFIVQRYSVRYLFGDRSYRKFFVLLTLTTGGASCA  119
            +  +  +P ++D L+WL+A FV+++GFI+Q++S+RYL+GD+ YR +F L+T  T+ AS A
Sbjct  57   HGQHVLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLA  116

Query  120  WLNDDLRWLLLCWGITLFGLTALIGLNSAWQAAKNAALYAGRIFalswlaiaaaalwlsl  179
            W+++DLR + LCWG+TL+ LT L+ +N  W+ ++++A  ++  F  +WLA+ +A + + +
Sbjct  117  WMSEDLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYI  176

Query  180  aTGHWQLSSAIAEESLVQLSSWEKTGIGLLIILTVMIPAAQWPFHRWLLDSAIAPTPVSA  239
            ATG+W+++  IA+      ++W      +L++L+VMIPAAQ PFHRWL++S  APTPVSA
Sbjct  177  ATGEWRVPQHIAH------PTWSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSA  229

Query  240  VMHAGLVNVGGVMLTRFAPMFSGDGLQLILLVPAVFSVLLGTGMMIVQTDYKRQLAASTV  299
            +MHAG+VN GGV+LTRFAP+F  +    +LL+ + +SVLLG+G+ +VQ DYKRQL +ST+
Sbjct  230  IMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTM  289

Query  300  AQMGFMLVQCALGAYIAAVIHLILHGLFKAALFLQAGSAVRRYESFASKRGRPALFWDMI  359
            +QMGFMLVQCALG Y AA+IHLILHG+FKA+LFLQ+GS V+R++      ++ A  W ++
Sbjct  290  SQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVM  349

Query  360  GGAFALTVVIGIWVSAADDGYQLISALVLGWALFIAWRQLVTANDGRVTRMAGLFILTGA  419
            G  +A+ V + +W+S+   +Y+++SAL+L+W+L+++W Q+V+ + GR++R+ G+++++  
Sbjct  350  GRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIV  409

Query  420  SLAFAIIHSGLHGLLKEAVVQGAQPPVMaavltvvvllagtaagalIVRQRFAWS-GALY  478
            ++ + I H+ + ++L++   +++ PP ++ +++VV+L+ G+  +  + R+R++ + + LY
Sbjct  410  TFIYIITHNYFYDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLY  469

Query  479  LRLVKTGEPHFESVEERPNYLDQYL  503
            ++LV+ GE++  ++E +PNYL +YL
Sbjct  470  VWLVNLGEARSKAIESHPNYLKKYL  494

100) GWCH70_1609 in NC_012793


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  288 bits (1078),  Expect = 6e-79, Method: Compositional matrix adjust.
 Identities = 221/501 (45%), Positives = 347/501 (70%), Gaps = 15/501 (2%)

Query  1    MVWFILLFA----TVGMALISSLLLLDRRMPLYYVQVHVGVMVLPIAAALAGLIFADHHA  56
            M+ F LLF+    ++ +ALIS+LL+L   MP+ Y+++H+ ++V+P+  A+ G++  + + 
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  57   AAGLWRSDILAWFMALFILTLGWMIARFCLRYLHGDRAYRKYFSLLTFTVSAAALTWMNN  116
              G  + D L+W++A F+++LG +I +F +RYL GD+ YR YF+L+T   S A+L+WM++
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  117  DIrllvlfwglpllglvqltrlKREWRPARTAAVRMAMVfslswlalfaaglwlwsaTGH  176
            D+RL+ L WG+ LL L  L  ++R W+ +R +A   +M F  +WLA+ +A + +  ATG+
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  177  WQLSLALSSESIRHLEWWEKTGVNVLLILAAIIPAGQWPFQRWLLESAVTPTPISAVMHA  236
            W+++     + I H  W      NVLL+LA +IPA+Q PF+RWL+ES  +PTP+SA+MHA
Sbjct  181  WRVP-----QHIAHPTW--SLLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHA  233

Query  237  GLINAGGLLLTRFSPLFSGDISQMlllvlasisvliGTGISFVQVDYKRQLVASTMAQMG  296
            G++NAGG++LTRF+P+F  +++  LLL+L+SISVL+G+GIS+VQVDYKRQLV+STM+QMG
Sbjct  234  GIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMG  293

Query  297  LMLIQCALGAYVAAVIHLVLHGLFKATLFLQSGSVVPNPNKTIHRSRNLSKTWLFTGAAA  356
            +ML+QCALG Y AA+IHL+LHG+FKATLFLQSGS+V   N   + S + +  W+  G   
Sbjct  294  FMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVL  353

Query  357  GLAVGVMFWLTSPEENAKLLSALILGWSLAFVWGRIAVFENGRTiglivlaglalas---  413
            ++ V+ +FW++S      +LSALIL+WSL   W ++  F +GR   L+ +  +++ +   
Sbjct  354  AIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIY  413

Query  414  gavHVSFMKLLHT-SVPLFRTSIITEMAAVFILITGGLAGIWFSTHRSSDSFVRLYMWLV  472
               H  F  +L+  +      + I+ + +V ILI G+L +IW + HR S +F  LY+WLV
Sbjct  414  IITHNYFYDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLV  473

Query  473  HIGEPRSESVESHPHYLADYL  493
            ++GE+RS ++ESHP+YL  YL
Sbjct  474  NLGEARSKAIESHPNYLKKYL  494

101) ndhF in NC_006270


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  269 bits (1004),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 190/445 (43%), Positives = 333/445 (75%), Gaps = 8/445 (1%)

Query  60   NPGQAEASWRLDSLAWLIALFVLTIGFIVQRYSVRYLFGDRSYRKFFVLLTLTTGGASCA  119
            +  +  ++ ++D L+WL+A FV+++GFI+Q++S+RYL+GD+ YR +F L+T  T+ AS A
Sbjct  57   HGQHVLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLA  116

Query  120  WLNDDlrwlllcwgitllgltaliglNSAWQAAKNAALYAGRIFalswlaiaaaalwlsl  179
            W+++DLR + LCWG+TLL LT L+ +N  W+ ++++A  ++  F  +WLA+ +A + + +
Sbjct  117  WMSEDLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYI  176

Query  180  sTGHWRLSSAIAEESLVQLSSWEKTGIGLLVILTVMIPAAQWPFHRWLLDSAIAPTPVSA  239
            +TG+WR++  IA+      ++W      +L++L+VMIPAAQ PFHRWL++S  APTPVSA
Sbjct  177  ATGEWRVPQHIAH------PTWSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSA  229

Query  240  VMHAGLVNVGGVMLTRFAPMFSGDVLQLILLVPAVLSVLLGTGMMIVQTDYKRQLAASTV  299
            +MHAG+VN GGV+LTRFAP+F  +    +LL+ + +SVLLG+G+ +VQ DYKRQL +ST+
Sbjct  230  IMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTM  289

Query  300  AQMGFMLVQCALGAYIAAVIHLILHGLFKAALFLQAGSAVRRYESFASKPGRPALFWNMI  359
            +QMGFMLVQCALG Y AA+IHLILHG+FKA+LFLQ+GS V+R++     +++ A  W ++
Sbjct  290  SQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVM  349

Query  360  GGVFALALVIGIWASATDDGYQLISALVLGWALFIAWRQLVTANYGRVTRIAGLFILTGA  419
            G V+A+ + + +W S+   +Y+++SAL+L+W+L+++W Q+V+ + GR++R+ G+++++  
Sbjct  350  GRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIV  409

Query  420  SLAFAIIHSVLHGLLKDAVVQGAEPPamaavltavvllagsaagalivRQRFAWS-GALY  478
            ++ + I H+ + ++L++   +++ PP+++ +++ V+L+ GS  +  + R+R++ + + LY
Sbjct  410  TFIYIITHNYFYDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLY  469

Query  479  LRLVKTGEPHFESVEERPNYLDQYL  503
            ++LV+ GE++  ++E +PNYL +YL
Sbjct  470  VWLVNLGEARSKAIESHPNYLKKYL  494

102) ndhF in NC_006322


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  269 bits (1004),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 190/445 (43%), Positives = 333/445 (75%), Gaps = 8/445 (1%)

Query  60   NPGQAEASWRLDSLAWLIALFVLTIGFIVQRYSVRYLFGDRSYRKFFVLLTLTTGGASCA  119
            +  +  ++ ++D L+WL+A FV+++GFI+Q++S+RYL+GD+ YR +F L+T  T+ AS A
Sbjct  57   HGQHVLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLA  116

Query  120  WLNDDlrwlllcwgitllgltaliglNSAWQAAKNAALYAGRIFalswlaiaaaalwlsl  179
            W+++DLR + LCWG+TLL LT L+ +N  W+ ++++A  ++  F  +WLA+ +A + + +
Sbjct  117  WMSEDLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYI  176

Query  180  sTGHWRLSSAIAEESLVQLSSWEKTGIGLLVILTVMIPAAQWPFHRWLLDSAIAPTPVSA  239
            +TG+WR++  IA+      ++W      +L++L+VMIPAAQ PFHRWL++S  APTPVSA
Sbjct  177  ATGEWRVPQHIAH------PTWSLLT-NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSA  229

Query  240  VMHAGLVNVGGVMLTRFAPMFSGDVLQLILLVPAVLSVLLGTGMMIVQTDYKRQLAASTV  299
            +MHAG+VN GGV+LTRFAP+F  +    +LL+ + +SVLLG+G+ +VQ DYKRQL +ST+
Sbjct  230  IMHAGIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTM  289

Query  300  AQMGFMLVQCALGAYIAAVIHLILHGLFKAALFLQAGSAVRRYESFASKPGRPALFWNMI  359
            +QMGFMLVQCALG Y AA+IHLILHG+FKA+LFLQ+GS V+R++     +++ A  W ++
Sbjct  290  SQMGFMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVM  349

Query  360  GGVFALALVIGIWASATDDGYQLISALVLGWALFIAWRQLVTANYGRVTRIAGLFILTGA  419
            G V+A+ + + +W S+   +Y+++SAL+L+W+L+++W Q+V+ + GR++R+ G+++++  
Sbjct  350  GRVLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIV  409

Query  420  SLAFAIIHSVLHGLLKDAVVQGAEPPamaavltavvllagsaagalivRQRFAWS-GALY  478
            ++ + I H+ + ++L++   +++ PP+++ +++ V+L+ GS  +  + R+R++ + + LY
Sbjct  410  TFIYIITHNYFYDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLY  469

Query  479  LRLVKTGEPHFESVEERPNYLDQYL  503
            ++LV+ GE++  ++E +PNYL +YL
Sbjct  470  VWLVNLGEARSKAIESHPNYLKKYL  494

103) GC56T3_3028 in NC_014206


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  265 bits (990),  Expect = 6e-72, Method: Compositional matrix adjust.
 Identities = 202/491 (42%), Positives = 336/491 (69%), Gaps = 14/491 (2%)

Query  10   WLAAIAVVFLSAIVWLSPRVSERYVHVHVWllllpgaaalFGWIGA-GAVDIGPWRFDAT  68
             + A+ + ++S+++ L+P ++ RY+ +H+ +L++P   A++G +G  G   +GP ++D  
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  69   SWLSAVYISLLSWAIQRFAVRYLHGDRRYRLYFSLLTWTSFAASLTWAADDLRLVAVCWG  128
            SWL A ++  L+  IQ+F++RYL GD++YR YF+L+T  +  ASL+W ++DLRL+A+CWG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  129  LPLAGLVALTVLKKEWEPVQFVARQMSVMFLTSWLAVAIVAVWLGMRGGEWTLASMLSAE  188
            + L  L  L  +++ W   +  A+  S+ FL +WLA     V + +  GEW ++     +
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVP-----Q  185

Query  189  RLAQLGSWEKAVlngllllgAIIPAGQWPFHRWLMESVVTPTPVSAVMHAGLVNAGGLLL  248
            ++A+  +W   + N LL+L+ +IPA+Q PFHRWL+ESV +PTPVSA+MHAG+VNAGG++L
Sbjct  186  HIAH-PTWS-LLTNVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  249  WRFSPLFHETWAHVALFLIAFASILIGTGISLVHVDYKRQLVGSTMAQMGVMLVQCALGA  308
             RF+P+F++  A   L++++  S+L+G+GISLV+VDYKRQLVGSTM+QMG MLVQCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  309  YGAAVVHLVLHGLFKATLFLQSGSVVPR--VGRAGLRKTGSSWPG-GIILGVLLGWAFWQ  365
            Y+AA++HL+LHG+FKATLFLQSGS+V R  + + +  K + +W   G +L+++++  FW 
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  366  AAPHEParllsalllaasaTVAWGRLTDFREG---RWLGFavvvalalvSETVRHQFMAL  422
            ++ + +  +LSAL+LA S  V+W ++  F  G   R +G  ++  ++++    ++ F  +
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  423  LHNGMPSAFLPPASFEWlvcalfvaaalvavWIANRRSSMLAIQLYMWLVHLGEPRPAAT  482
            L+N    A  PP+    +   +++ ++L+++W+A +R S     LY+WLV+LGE+R+ A 
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  483  EAHPRYLASYL  493
            E+HP YL  YL
Sbjct  484  ESHPNYLKKYL  494

104) GTCCBUS3UF5_5560 in NC_016593


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  264 bits (987),  Expect = 9e-72, Method: Compositional matrix adjust.
 Identities = 198/491 (41%), Positives = 328/491 (67%), Gaps = 13/491 (2%)

Query  10   WLAAIAVVFLSAIVWLFPRVSERYVHVHVWLLLLPGTAALFGWIGAGGAVDIGPWRFDAT  69
             + A+ + ++S+++ L P ++ RY+ +H+ +L++P   A++G +G  G   +GP ++D  
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  70   SWLSAVYISLLSWAIQRFAVRYLHGDRRYRLYFSLLTWTSFAASLTWAAGDLRLIAVCWG  129
            SWL A ++  L+  IQ+F++RYL GD++YR YF+L+T  +  ASL+W + DLRL+A+CWG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  130  LPLVGLVALTALKKEWEPAQFVAWQMGMLFLASWIAVALTAVWLGARVGEWTlvsalsae  189
            + L+ L  L  +++ W  ++  A   +M FL +W+A   + V +    GEW +   ++  
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  190  rlarlalweravMSGLLMLAAVIPAGQWPFHRWLMESAVTPTPVSAVMHAGLVNAGGLLL  249
              + L+       + LL+LA +IPA+Q PFHRWL+ES  +PTPVSA+MHAG+VNAGG++L
Sbjct  191  TWSLLT-------NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  250  WRFSPLFNETWAHVALFLIAFASILIGTGVSFVHVDYKRQLVGSTMAQMGVMLVQCALGA  309
             RF+P+F++  A   L++++  S+L+G+G+S+V+VDYKRQLVGSTM+QMG MLVQCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  310  YGAAVVHLVLHGLFKATLFLQSGSVVPR--VGRAGLRKTGSSWPG-GIILGVLFGWGFWQ  366
            Y+AA++HL+LHG+FKATLFLQSGS+V R  + + +  K + +W   G +L+++ +  FW 
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  367  AAPHEParllsalllaasaTVAWGRLTDFREG---RWLGFavvvalalaSETVRNQFMAL  423
            ++ + +  +LSAL+LA S  V+W ++  F  G   R +G  ++  +++     +N F  +
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  424  LHNGMPSAFLPPASFEWlvcalfvaaalvavWIANRRSSMLAIQLYMWLVHLGEPRPAAT  483
            L+N    A  PP+    +   +++ ++L+++W+A +R S     LY+WLV+LGE+R+ A 
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  484  EAHPRYLASYL  494
            E+HP YL  YL
Sbjct  484  ESHPNYLKKYL  494

105) GYMC52_0446 in NC_014915


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  261 bits (975),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 198/491 (41%), Positives = 334/491 (69%), Gaps = 14/491 (2%)

Query  10   WLAAIAVVFLSAIVWLSPRVSERYVHVHVWllllpgaaalFGWIGA-GAVDIGPWRFDAT  68
             + A+ + ++S+++ L+P ++ RY+ +H+ +L++P   A++G +G  G   +GP ++D  
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  69   SWLSAVYISLLSWAIQRFAVRYLHGDRRYRLYFSLLTWTSFAASLTWAAGDLRLIAVCWG  128
            SWL A ++  L+  IQ+F++RYL GD++YR YF+L+T  +  ASL+W + DLRL+A+CWG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  129  LPLVGLVALTALKKEWEPAQFVARQMGMLFLASWIAVALTVVWLGVRVGEWTlvsalsae  188
            + L+ L  L  +++ W  ++  A+  +M FL +W+A   ++V + +  GEW +   ++  
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  189  rlarlalweravMSGLLMLVAVIPAGQWPFHRWLMESVVTPTPVSAVMHAGLVNAGGLLL  248
              + L+       + LL+L  +IPA+Q PFHRWL+ESV +PTPVSA+MHAG+VNAGG++L
Sbjct  191  TWSLLT-------NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  249  WRFSPLFHETWAHVALFLIAFASILIGTGISLVHVDYKRQLVGSTMAQMGVMLVQCALGA  308
             RF+P+F++  A   L++++  S+L+G+GISLV+VDYKRQLVGSTM+QMG MLVQCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  309  YGAAVVHLVLHGLFKATLFLQSGSVVPR--VGRAGLRKTGSSWPG-GIILGVLLGWAFWQ  365
            Y+AA++HL+LHG+FKATLFLQSGS+V R  + + +  K + +W   G +L+++++  FW 
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  366  AAPHEParllsalllaasaTVAWGRLTDFREG---RWLGFavvvalalvSETVRHQFMAL  422
            ++ + +  +LSAL+LA S  V+W ++  F  G   R +G  ++  ++++    ++ F  +
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  423  LHNGMPSAFLPPASFEWlvcalfvaaalvavWIANRRSSILAIRLYMWFVHLGEPRPAAT  482
            L+N    A  PP+    +   +++ ++L+++W+A +R S     LY+W+V+LGE+R+ A 
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  483  EAHPRYLASYL  493
            E+HP YL  YL
Sbjct  484  ESHPNYLKKYL  494

106) GYMC61_1324 in NC_013411


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  261 bits (975),  Expect = 8e-71, Method: Compositional matrix adjust.
 Identities = 198/491 (41%), Positives = 334/491 (69%), Gaps = 14/491 (2%)

Query  10   WLAAIAVVFLSAIVWLSPRVSERYVHVHVWllllpgaaalFGWIGA-GAVDIGPWRFDAT  68
             + A+ + ++S+++ L+P ++ RY+ +H+ +L++P   A++G +G  G   +GP ++D  
Sbjct  11   FVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRL  70

Query  69   SWLSAVYISLLSWAIQRFAVRYLHGDRRYRLYFSLLTWTSFAASLTWAAGDLRLIAVCWG  128
            SWL A ++  L+  IQ+F++RYL GD++YR YF+L+T  +  ASL+W + DLRL+A+CWG
Sbjct  71   SWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWG  130

Query  129  LPLVGLVALTALKKEWEPAQFVARQMGMLFLASWIAVALTVVWLGVRVGEWTlvsalsae  188
            + L+ L  L  +++ W  ++  A+  +M FL +W+A   ++V + +  GEW +   ++  
Sbjct  131  MTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRVPQHIAHP  190

Query  189  rlarlalweravMSGLLMLVAVIPAGQWPFHRWLMESVVTPTPVSAVMHAGLVNAGGLLL  248
              + L+       + LL+L  +IPA+Q PFHRWL+ESV +PTPVSA+MHAG+VNAGG++L
Sbjct  191  TWSLLT-------NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVIL  243

Query  249  WRFSPLFHETWAHVALFLIAFASILIGTGISLVHVDYKRQLVGSTMAQMGVMLVQCALGA  308
             RF+P+F++  A   L++++  S+L+G+GISLV+VDYKRQLVGSTM+QMG MLVQCALG 
Sbjct  244  TRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGV  303

Query  309  YGAAVVHLVLHGLFKATLFLQSGSVVPR--VGRAGLRKTGSSWPG-GIILGVLLGWAFWQ  365
            Y+AA++HL+LHG+FKATLFLQSGS+V R  + + +  K + +W   G +L+++++  FW 
Sbjct  304  YSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWM  363

Query  366  AAPHEParllsalllaasaTVAWGRLTDFREG---RWLGFavvvalalvSETVRHQFMAL  422
            ++ + +  +LSAL+LA S  V+W ++  F  G   R +G  ++  ++++    ++ F  +
Sbjct  364  SSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDV  423

Query  423  LHNGMPSAFLPPASFEWlvcalfvaaalvavWIANRRSSILAIRLYMWFVHLGEPRPAAT  482
            L+N    A  PP+    +   +++ ++L+++W+A +R S     LY+W+V+LGE+R+ A 
Sbjct  424  LQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVWLVNLGEARSKAI  483

Query  483  EAHPRYLASYL  493
            E+HP YL  YL
Sbjct  484  ESHPNYLKKYL  494

107) Geoth_2089 in NC_015660


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  255 bits (954),  Expect = 4e-69, Method: Compositional matrix adjust.
 Identities = 215/503 (43%), Positives = 342/503 (68%), Gaps = 18/503 (3%)

Query  1    MVWFILLFA----AVGIVFISSLLLLDRRVPLCYVRVHvgvmvlpaavalaglvfaNHHV  56
            M+ F LLF+    A+ I +IS+LL+L   +P+ Y+++H+ ++V+P   A+ G+   + + 
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  57   TVGLWRSDMLGWFMALFILALGWMIERFCLRYLYGDRVYRKYFTLLTFTVGIAALTWLSD  116
             +G  + D L+W++A F++ALG +I++F +RYL GD+ YR YF L+T   ++A+L+W+S+
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  117  DirllilfwglpllgltkltrlkKEWRParmaaarmasaFSLSWLALFIAGLWLWNATGH  176
            D+RL+ L WG+ LL LT L  +++ W+ +R +A   + +F  +WLA+  A + +  ATG+
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  177  WRLSFALSTESIRHLEWWEKTGMSMLLVLTAIVPAGQWPFQRWLLESAVTPTPVSAVMHA  236
            WR++     + I H  W   T  ++LLVL+ ++PA+Q PF+RWL+ES  +PTPVSA+MHA
Sbjct  181  WRVP-----QHIAHPTWSLLT--NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHA  233

Query  237  GLVNAGGLLLTRFAPLFNGDVSQMLLAVFASISVLVGTGISFVQVDYKRQLVASTMAQMG  296
            G+VNAGG++LTRFAP+F+ + +  LL +++SISVL+G+GIS+VQVDYKRQLV+STM+QMG
Sbjct  234  GIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMG  293

Query  297  LMFIQCALGAYVAAVIHLVLHGMFKATLFLQSGSVVPRPNQTIRLSQSLSRTWRFTgavv  356
            +M++QCALG Y AA+IHL+LHG+FKATLFLQSGS+V R N   + S   +  W       
Sbjct  294  FMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGW--IVMGR  351

Query  357  gfvaggivLL-MSPEENA-KWLSSLILGWTLAFAWERLAVFKDGRIIVLFGLV---GAVF  411
             +      L+ MS++ +A   LS+LIL+W+L  +W+++  F  GR+  L G++      F
Sbjct  352  VLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTF  411

Query  412  VSGTVHGGLMMLLHKAVPLSSNTSvaaeaiavlmlaaGGLASIWLSAHRSSDLFARLYMQ  471
            +    H  +  +L++    ++  +  +  I+V++L  G+L SIW++ HR S  FA LY+ 
Sbjct  412  IYIITHNYFYDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVW  471

Query  472  LVHMGEPRLESMESHPRYLADYL  494
            LV++GE+R  ++ESHP YL  YL
Sbjct  472  LVNLGEARSKAIESHPNYLKKYL  494

108) M493_02610 in NC_022080


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  254 bits (949),  Expect = 9e-69, Method: Compositional matrix adjust.
 Identities = 198/475 (42%), Positives = 325/475 (69%), Gaps = 16/475 (3%)

Query  27   PRVPERYVHIHVWLLLLPgaaaaagw-igagnaeagPWRFDAVSWLMAVYVSLLSWAIQR  85
            P +P RY+ +H+ +L++P   A  G     G+   GP ++D +SWL+A +V  L+  IQ+
Sbjct  28   PVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQHVLGPFKIDRLSWLLAGFVMALGFIIQK  87

Query  86   FAVRYLHGDRAYRRYFSLLTWTVSAASLTWASGDMRFVAVCWGLPLAGLVTLTALKKEWR  145
            F++RYL GD+ YR+YF+L+T   S ASL+W S D+R++A+CWG+ L  L  L  +++ W+
Sbjct  88   FSMRYLLGDHHYRHYFPLFTAITSFASLAWMSEDLRLMALCWGMTLLCLTLLMNVNRFWK  147

Query  146  PARFVARQMAAVFGISWFAVVIVAVWLGLATGEWRLVSALSEEHLARLGAWEKAVMNGLL  205
             +R  A+  +  F  +W+A V   V + +ATGEWR+      +H+A+  +W   + N LL
Sbjct  148  VPRESAKLSSMTFLCGWLAFVGAIVSIYIATGEWRV-----PQHIAH-PTWS-LLTNVLL  200

Query  206  ILAAIIPAGQWPFHRWLMESVVTPTPVSAVMHAGLVNAGGLLLWRFSPLFSGTGAHAALF  265
            +LA +IPA+Q PFHRWL+ESV +PTPVSA+MHAG+VNAGG++L RF+P+F    A + L+
Sbjct  201  VLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHAGIVNAGGVILTRFAPIFDNGFALSLLL  260

Query  266  LVAFVSILIGTGISLVHVDYKRQLVASTMAQMGVMLVQCALGAYGAAVVHLVLHGLFKAT  325
            +++ +S+L+G+GISLV+VDYKRQLV+STM+QMG MLVQCALG Y+AA++HL+LHG+FKAT
Sbjct  261  ILSSISVLLGSGISLVQVDYKRQLVGSTMSQMGFMLVQCALGVYSAAIIHLILHGIFKAT  320

Query  326  LFLQSGSVVPR--VGRAGYRKASGSWRG-GMIVGSLLGVSFWFAAPGEParllsalllga  382
            LFLQSGS+V R  + + +  K + +W   G +++ +++  FW ++   +  +LSAL+L+ 
Sbjct  321  LFLQSGSIVKRFNIPKQASAKDAYGWIVMGRVLAIIVAFLFWMSSDRSAYEVLSALILAW  380

Query  383  saaVAWGRLADFREG---RWLGFTAVAVLAFGSETVRHQFMAFFHTEETLSFASSALFEW  439
            S  V+W ++  F  G   R +G   +++++F     ++ F   ++   T + +++++   
Sbjct  381  SLLVSWNQMVAFSKGRMARLVGMILISIVTFIYIITHNYFYDVLQNITTHATTPPTISVI  440

Query  440  MASVLFiaaalaaa-wiaNRRTSTLAVRLYMRLVHLGEPRPAAMETHPRYLASYM  493
            ++ V++I ++L +     +R + T+AV LY++LV+LGE+R+ A+E+HP YL  Y+
Sbjct  441  ISVVILIFGSLLSIWVARHRYSKTFAV-LYVWLVNLGEARSKAIESHPNYLKKYL  494

109) GY4MC1_1999 in NC_014650


> NC_002952_P2|36|G32|49482676|YP_039900.1|Staphylococcus_aureus_subsp._aureus_MRSA252|+|29862..31346|-|SAR0452|NADH 
dehydrogenase 
subunit 5
Length=494

 Score =  251 bits (938),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 215/503 (43%), Positives = 340/503 (68%), Gaps = 18/503 (3%)

Query  1    MVWFILLFA----AVGIVFISSLLLLDRRVPLCYVRVHvgvmglpaavalaglvFANHHV  56
            M+ F LLF+    A+ I +IS+LL+L   +P+ Y+++H+ ++ +P   A+ G+   + + 
Sbjct  1    MLSFQLLFSLFVIALIIALISGLLFLAPVMPMRYIKLHLYILVMPVLFAVIGFFGIHGQH  60

Query  57   TVGLWRSDMLGWFMALFILALGWMIERFCLRYLYGDRVYRKYFTLLTFTVGIAALTWLSD  116
             +G  + D L+W++A F++ALG +I++F +RYL GD+ YR YF L+T   ++A+L+W+S+
Sbjct  61   VLGPFKIDRLSWLLAGFVMALGFIIQKFSMRYLLGDHHYRHYFPLFTAITSFASLAWMSE  120

Query  117  DirllilfwglpllglikltrlkkEWRParmaaarmasaFSLSWLALFIAGLWLWNATGH  176
            D+RL+ L WG+ LL L  L  +++ W+ +R +A   + +F  +WLA+  A + +  ATG+
Sbjct  121  DLRLMALCWGMTLLCLTLLMNVNRFWKVPRESAKLSSMTFLCGWLAFVGAIVSIYIATGE  180

Query  177  WRLSFALSTESIRHLEWWEKTGMSMLLVLTAIVPAGQWPFQRWLLESAVTPTPVSAVMHA  236
            WR++     + I H  W   T  ++LLVL+ ++PA+Q PF+RWL+ES  +PTPVSA+MHA
Sbjct  181  WRVP-----QHIAHPTWSLLT--NVLLVLAVMIPAAQFPFHRWLIESVTAPTPVSAIMHA  233

Query  237  GLVNAGGLLLTRFAPLFNGDVSQMLLAVFASISVLVGTGISFVQVDYKRQLVASTMAQMG  296
            G+VNAGG++LTRFAP+F+ + +  LL +++SISVL+G+GIS+VQVDYKRQLV+STM+QMG
Sbjct  234  GIVNAGGVILTRFAPIFDNGFALSLLLILSSISVLLGSGISLVQVDYKRQLVGSTMSQMG  293

Query  297  LMFIQCALGAYVAAVIHLVLHGMFKATLFLQSGSVVPRPNQTIRLSQSLSRTWRFTgavv  356
            +M++QCALG Y AA+IHL+LHG+FKATLFLQSGS+V R N   + S   +  W       
Sbjct  294  FMLVQCALGVYSAAIIHLILHGIFKATLFLQSGSIVKRFNIPKQASAKDAYGW--IVMGR  351

Query  357  gfvaggivLL-MSPEENA-KWLSGLILGWTLAFVWERLVVFKDGRIVVLFGLI---GAVF  411
             +      L+ MS++ +A   LS+LIL+W+L   W+++V F  GR+  L G+I      F
Sbjct  352  VLAIIVAFLFWMSSDRSAYEVLSALILAWSLLVSWNQMVAFSKGRMARLVGMILISIVTF  411

Query  412  VSGTVHCGLMMLLHKAVPLSSNTSvaaeaiavlmlaaGGLASIWLSAHRSSELFARLYMQ  471
            +    H  +  +L++    ++  +  +  I+V++L  G+L SIW++ HR S  FA LY+ 
Sbjct  412  IYIITHNYFYDVLQNITTHATTPPTISVIISVVILIFGSLLSIWVARHRYSKTFAVLYVW  471

Query  472  LVHMGEPRLESMESHPRYLDDYL  494
            LV++GE+R  ++ESHP YL  YL
Sbjct  472  LVNLGEARSKAIESHPNYLKKYL  494