> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  580 bits (2189),  Expect = 7e-167, Method: Compositional matrix adjust.
 Identities = 356/497 (72%), Positives = 424/497 (86%), Gaps = 1/497 (0%)

Query  2    VDFTPLQNTLLADLTGELPTAVRLQRLVVSLREVFACSAVVLLRLDGDNLRPQAAVGLSH  61
            V  T++ N LLADL ++LP+AVRLQRLV SLR+ F CSAVVLLRLDGD L+ QAAVGL  
Sbjct  36   VKSTSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDL  95

Query  62   ETLGRSFVVARHPRLALIMEQRAPVQFPAHSELPDPYDGLLQHSPDEPLPVHDCMGMSLV  121
            E LGRSF V RHPRLA I+E+  PV+F+A+SELPDPYDGLLQ+SP  PLPVHDCMGM+L 
Sbjct  96   EVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLR  155

Query  122  VDGRTWGAVTLDALRPGTFDRRAGERLQRYGLLIEAALRTCRLENEIRSLRLVRTEPGEE  181
            V+GR WGAVTLDALRPG+FD   + RL+  + LIE+ALR  +LENE+R+LRL R+   E 
Sbjct  156  VQGRLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEP  215

Query  182  GDEAAGMILGDSPILTQLLDELGVVAESELPVLLQGETGVGKELFARWLHAHSPRARKPL  241
            + E+   ILGDSP+L  LL EL +VA++ELPVLLQGETGVGKELFA+WLHA+SPRAR+P+
Sbjct  216  AVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPM  275

Query  242  VYVNCAALPETLAESELFGHVRGAFSGATQDRPGRFEAANGGTLFLDEIGELPLSIQAKL  301
            V VNCAALPETLAESELFGHVRGAFSGATQDR GRFE+A+GGTLFLDEIGELPL+IQAKL
Sbjct  276  VHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKL  335

Query  302  LRALQNGEIQRLGSDRTRHVDVRVITATNRRLWEEVREGRFRADLYHRLSVYPVHIPPLR  361
            LRALQ+GEIQRLG+DR +HV+VR+I+ATNR L EEVR GRFRADLYHRLSVYPVHIPPLR
Sbjct  336  LRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLR  395

Query  362  ERGRDILLLAGHFLELNRARLGLRCLRLSADAEEALLGYCWPGNVRELEHVISRAALKVL  421
            ERG+D+L+LAGHFLELNR RLGLRCLRL+ADAE ++L+Y WPGNVRELEHVISRAALKVL
Sbjct  396  ERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVL  455

Query  422  SQAESRTALLSIGASWLGLEGpvslpastpaapspvase-slQQSVDRYQRELIRNALSE  480
            SQAESR ALLSI A+ LGLE     ++++ +A+ +  +  SLQ +VD YQR+L+++AL  
Sbjct  456  SQAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  481  HGGKWAATARTLAVDPS  497
            H GKWA++AR+L +DPS
Sbjct  516  HNGKWAGAARALEMDPS  532

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  543 bits (2048),  Expect = 9e-156, Method: Compositional matrix adjust.
 Identities = 319/503 (64%), Positives = 417/503 (83%), Gaps = 4/503 (0%)

Query  6    LLADLVTELPNAVRLQRLVHTLHQRFRCGAVVLLRLDEDALRPLAAVGLVQEALGRRFVV  65
            LLADL ++LP AVRLQRLV +L++ F C+AVVLLRLD D L+  AAVGL  E LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  66   AQHPRLAAILSQREPTWFEPDSRLPDPYDGLLDQHVGEPLPVHDCMGISLYVEGALWGAL  125
             +HPRLA IL + EP +F +DS LPDPYDGLL++  + PLPVHDCMG++L V+G LWGA+
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  126  TLDALHAGTFDDEIRRDLQRYTLLIEAAVRITRLEHENRGLRLARSDVLENTLVPGDDEI  185
            TLDAL++G+FD  + R L+  + LIE+A+RI +LE+E RGLRLARS+++E + V +++ I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPA-VESQNSI  223

Query  186  LGQSPVIRDLLRELVVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVLVNCAAL  245
            LG+SPV+R+LL+EL +VAD+ELPVLL GETGVGKELFA+WLH +S R  +P+V VNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  246  PESLAESELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLRTLQNGE  305
            PE+LAESELFGHV+GAFSGAT DR GRF++A+GGTL+LDE+GELPL++QAKLLR+LQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  306  IQRLGADKPRQVDVRIIAATNRNLRESVRDGHFRADLYHRLSVYPAPIPPLRERGNDVLL  365
            IQRLGAD+P++V+VRIIAATNR L E VR G+FRADLYHRLSVYP  IPPLRERG+DVL+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  366  LAGYFLELNRARLGLRSMRLSPAAERALLGYAWPGNVRELEHVISRAALRMLSQGASRRE  425
            LAG FLELNR RLGLR +RL++ AER++L+YAWPGNVRELEHVISRAAL++LSQ+ SR+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  426  ILTLEPELLDLDSSPVASVVDTPGTTEPLTAQQILSLRETVDASQRQAIVRALEASGENW  485
            +L++E+  L+L+ +  ++    P++   ++++   SL+ +VD+ QRQ +  AL+    +W
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAA---IAGETPYSLQAAVDSYQRQLLQDALQRHNGKW  520

Query  486  AQAARLLDVDPSNLHKLARRLKL  508
            A AAR L++DPSNL+KLARRL+L
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  536 bits (2022),  Expect = 1e-153, Method: Compositional matrix adjust.
 Identities = 309/497 (63%), Positives = 409/497 (83%), Gaps = 3/497 (0%)

Query  12   TTELPNAVRLQRLVHTLQQRFRCGAVVLLRLDEDSLRPLAAVGLVQEALGRRFVIAQHPR  71
             ++LP AVRLQRLV +L++ F C+AVVLLRLD D L+  AAVGL  E LGR F + +HPR
Sbjct  50   PSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPR  109

Query  72   LAAILSQREPTWFEPDSRLPDPYDGLLDAHIGEPLPVHDCMGVSLYVEGKLWGALTLDAL  131
            LA IL + EP +F +DS LPDPYDGLL+   + PLPVHDCMG++L V+G+LWGA+TLDAL
Sbjct  110  LARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDAL  169

Query  132  HAGTFDDDARRDLQRYTLVIEAAVRVTRLEHENRGLRLARSDVMETTLDHGDGEILGQSD  191
            ++G+FD    R L+  + +IE+A+R+ +LE+E RGLRLARS+++E +++ ++  ILG+S 
Sbjct  170  RPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE-SQNSILGDSP  228

Query  192  VIRELLRELQVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVHVNCAALPESLA  251
            V+R LL+EL++VAD+ELPVLL GETGVGKELFA+WLH +S R  +P+VHVNCAALPE+LA
Sbjct  229  VLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLA  288

Query  252  ESELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLRTLQNGEIQRLG  311
            ESELFGHV+GAFSGAT DR GRF++A+GGTL+LDE+GELPL++QAKLLR+LQ+GEIQRLG
Sbjct  289  ESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLG  348

Query  312  ADKPRQVDVRIIAATNRNLRESVRDGHFRADLYHRLSVYPAPIPPLRERGNDVLILAGHF  371
            AD+P++V+VRIIAATNR L E VR G+FRADLYHRLSVYP  IPPLRERG+DVL+LAGHF
Sbjct  349  ADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHF  408

Query  372  LELNRARLGLRSMRLSPAAERALLGYSWPGNVRELEHVVSRAALRLLSRGASRSEILTLE  431
            LELNR RLGLR +RL++ AER++L+Y+WPGNVRELEHV+SRAAL++LS++ SR  +L++E
Sbjct  409  LELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIE  468

Query  432  PDLLDLDSHAVGVTASQVVEEPVIADEVLPLRHTVDAAQRQAIVRALEASGENWAQAARL  491
            +  L+L+  +    AS  V  ++ ++   +L+ +VD+ QRQ +  AL+    +WA AAR 
Sbjct  469  AAGLGLEVTTHPAPAS--VPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARA  526

Query  492  LDVDPSNLHKLARRLKL  508
            L++DPSNL+KLARRL+L
Sbjct  527  LEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  532 bits (2007),  Expect = 2e-152, Method: Compositional matrix adjust.
 Identities = 312/495 (64%), Positives = 412/495 (84%), Gaps = 3/495 (0%)

Query  13   ELPNAVRLQRLVHTLQQHFNCGAVVLLRLDEDSLRPLAAVGLVQEALGRRFVVAQHPRLA  72
            +LP AVRLQRLV +L+++FNC+AVVLLRLD D L+  AAVGL  E LGR F V +HPRLA
Sbjct  52   DLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLA  111

Query  73   AILSQREPTWFEPDSRLPDPYDGLLDAHVGEPLPVHDCMGVSLYVEGKLWGALTLDALHA  132
             IL + EP +F +DS LPDPYDGLL+   + PLPVHDCMG++L V+G+LWGA+TLDAL++
Sbjct  112  RILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRP  171

Query  133  GTFDDAARCDLQRFTLVIEAAVRVTRLEHENRGLRLARSDVLESSVEHGEGEILGQSEAI  192
            G+FD +    L+  + +IE+A+R+ +LE+E RGLRLARS+++E++VE ++  ILG+S  +
Sbjct  172  GSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE-SQNSILGDSPVL  230

Query  193  RELLRELQVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVHVNCAALPESLAES  252
            R LL+EL++VAD+ELPVLL GETGVGKELFA+WLH +S R  +P+VHVNCAALPE+LAES
Sbjct  231  RGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAES  290

Query  253  ELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLRTLQNGEIQRLGAD  312
            ELFGHV+GAFSGAT DR GRF++A+GGTL+LDE+GELPL++QAKLLR+LQ+GEIQRLGAD
Sbjct  291  ELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGAD  350

Query  313  KPRQVDVRIIAATNRNLRDSVRDGHFRADLYHRLSVYPAPIPPLRERGNDVLILAGHFLE  372
            +P++V+VRIIAATNR L + VR G+FRADLYHRLSVYP  IPPLRERG+DVL+LAGHFLE
Sbjct  351  RPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLE  410

Query  373  LNRARLGLRSMRLSPAAERALLAYSWPGNVRELEHVVSRAALRLLSRGASRSEILTLEPE  432
            LNR RLGLR +RL++ AER++LAY+WPGNVRELEHV+SRAAL++LS++ SR  +L++E+ 
Sbjct  411  LNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAA  470

Query  433  LLDLDSHVAGTEAPAPTEQPVAVDEILPLRQTVDAAQRRAIVYALEASGENWAQAARLLD  492
             L+L+  V+   APA+   ++A +   +L+ +VD+ QR+ +  AL+    +WA AAR L+
Sbjct  471  GLGLE--VTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALE  528

Query  493  VDPSNLHKLARRLKL  507
            +DPSNL+KLARRL+L
Sbjct  529  MDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  531 bits (2005),  Expect = 3e-152, Method: Compositional matrix adjust.
 Identities = 313/495 (64%), Positives = 411/495 (84%), Gaps = 3/495 (0%)

Query  13   ELPNAVRLQRLVHTLQQHFNCGAVVLLRLDEDSLRPLAAVGLVQEALGRRFVVAQHPRLA  72
            +LP AVRLQRLV +L+++FNC+AVVLLRLD D L+  AAVGL  E LGR F V +HPRLA
Sbjct  52   DLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLA  111

Query  73   AILSQREPTWFEPDSRLPDPYDGLLDAHVGEPLPVHDCMGVSLYVEGKLWGALTLDALHA  132
             IL + EP +F +DS LPDPYDGLL+   + PLPVHDCMG++L V+G+LWGA+TLDAL++
Sbjct  112  RILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRP  171

Query  133  GTFDDAARCDLQRFTLVIEAAVRVTRLEHENRGLRLARSDVLESSVEHGEGEILGQSEAI  192
            G+FD +    L+  + +IE+A+R+ +LE+E RGLRLARS+++E++VE ++  ILG+S  +
Sbjct  172  GSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE-SQNSILGDSPVL  230

Query  193  RELLRELQVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVHVNCAALPESLAES  252
            R LL+EL++VAD+ELPVLL GETGVGKELFA+WLH +S R  +P+VHVNCAALPE+LAES
Sbjct  231  RGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAES  290

Query  253  ELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLRTLQNGEIQRLGAD  312
            ELFGHV+GAFSGAT DR GRF++A+GGTL+LDE+GELPL++QAKLLR+LQ+GEIQRLGAD
Sbjct  291  ELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGAD  350

Query  313  KPRQVDVRIIAATNRNLRDSVRDGHFRADLYHRLSVYPAPIPPLRERGNDVLILAGHFLE  372
            +P++V+VRIIAATNR L + VR G+FRADLYHRLSVYP  IPPLRERG+DVL+LAGHFLE
Sbjct  351  RPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLE  410

Query  373  LNRARLGLRSMRLSPAAERALLAYSWPGNVRELEHVVSRAALRLLSRGASRSEILTLEPE  432
            LNR RLGLR +RL++ AER++LAY+WPGNVRELEHV+SRAAL++LS++ SR  +L++E+ 
Sbjct  411  LNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAA  470

Query  433  LLDLDSHVAGTEAPALAEQPVAVDEILSLRQTVDAAQRRAIVYALEASAENWAQAARLLD  492
             L+L+  V+   APA    ++A +   SL+ +VD+ QR+ +  AL+    +WA AAR L+
Sbjct  471  GLGLE--VTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALE  528

Query  493  VDPSNLHKLARRLKL  507
            +DPSNL+KLARRL+L
Sbjct  529  MDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  530 bits (2000),  Expect = 7e-152, Method: Compositional matrix adjust.
 Identities = 310/495 (63%), Positives = 411/495 (84%), Gaps = 3/495 (0%)

Query  13   ELPNAVRLQRLVHTLHQHFRCGAVVLLRLDEDSLRPLAAVGLVQEALGRRFVVAQHPRLA  72
            +LP AVRLQRLV +L+++F C+AVVLLRLD D L+  AAVGL  E LGR F V +HPRLA
Sbjct  52   DLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLA  111

Query  73   AILSQREPTWFEPDSRLPDPYDGLLDEHIGEPLPVHDCMGVSLYVEGKLWGALTLDALHA  132
             IL + EP +F +DS LPDPYDGLL++  + PLPVHDCMG++L V+G+LWGA+TLDAL++
Sbjct  112  RILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRP  171

Query  133  GTFGDDARCDLQRYTLVIEAAVRVTRLEHENRGLRLARSDVMEAALDHGDGEILGQSDVI  192
            G+F+      L+  + +IE+A+R+ +LE+E RGLRLARS+++E+A++ ++  ILG+S V+
Sbjct  172  GSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE-SQNSILGDSPVL  230

Query  193  RELLRELQVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVHVNCAALPESLAES  252
            R LL+EL++VAD+ELPVLL GETGVGKELFA+WLH +S R  +P+VHVNCAALPE+LAES
Sbjct  231  RGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAES  290

Query  253  ELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLRTLQNGEIQRLGAD  312
            ELFGHV+GAFSGAT DR GRF++A+GGTL+LDE+GELPL++QAKLLR+LQ+GEIQRLGAD
Sbjct  291  ELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGAD  350

Query  313  KPRQVDVRIIAATNRNLRESVRDGHFRADLYHRLSVYPAPIPPLRERGNDVLILAGHFLE  372
            +P++V+VRIIAATNR L E VR G+FRADLYHRLSVYP  IPPLRERG+DVL+LAGHFLE
Sbjct  351  RPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLE  410

Query  373  LNRARLGLRSMRLSPAAERALLAYSWPGNVRELEHVVSRAALRLLSRGASRSEILTLEPD  432
            LNR RLGLR +RL++ AER++LAY+WPGNVRELEHV+SRAAL++LS++ SR  +L++E+ 
Sbjct  411  LNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAA  470

Query  433  LLDLDSHAVGAVAAQVVDEPVVADEVLPLRYTVDAAQRQAIVRALEASGENWAQAARLLD  492
             L+L+  +  A A+  V  ++ ++   +L+ +VD+ QRQ +  AL+    +WA AAR L+
Sbjct  471  GLGLEVTTHPAPAS--VPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALE  528

Query  493  VDPSNLHKLARRLKL  507
            +DPSNL+KLARRL+L
Sbjct  529  MDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  522 bits (1971),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 311/495 (63%), Positives = 411/495 (84%), Gaps = 3/495 (0%)

Query  23   ELPNAVRLQRLVHTLHQHFRCGAVVLLRLDEDSLRPLAAVGLVQEALGRRFVVAQHPRLA  82
            +LP AVRLQRLV +L+++F C+AVVLLRLD D L+  AAVGL  E LGR F V +HPRLA
Sbjct  52   DLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLA  111

Query  83   AILSQREPTWFEPDSRLPDPYDGLLDAHVGEPLPVHDCMGVSLYVEGKLWGALTLDALHA  142
             IL + EP +F +DS LPDPYDGLL+   + PLPVHDCMG++L V+G+LWGA+TLDAL++
Sbjct  112  RILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRP  171

Query  143  GTFDDAARCDLQRFTLVIEAAVRVTRLEHENRGLRLARSDVLESSVEHGEGEILGQSEAI  202
            G+FD +    L+  + +IE+A+R+ +LE+E RGLRLARS+++E++VE ++  ILG+S  +
Sbjct  172  GSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE-SQNSILGDSPVL  230

Query  203  RELLRELQVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVHVNCAALPESLAES  262
            R LL+EL++VAD+ELPVLL GETGVGKELFA+WLH +S R  +P+VHVNCAALPE+LAES
Sbjct  231  RGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAES  290

Query  263  ELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLRTLQNGEIQRLGAD  322
            ELFGHV+GAFSGAT DR GRF++A+GGTL+LDE+GELPL++QAKLLR+LQ+GEIQRLGAD
Sbjct  291  ELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGAD  350

Query  323  KPRQVDVRIIAATNRNLRDSVRDGHFRADLYHRLSVYPAPIPPLRERGNDVLILAGHFLE  382
            +P++V+VRIIAATNR L + VR G+FRADLYHRLSVYP  IPPLRERG+DVL+LAGHFLE
Sbjct  351  RPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLE  410

Query  383  LNRARLGLRSMRLSPAAERALLAYSWPGNVRELEHVVSRAALRLLSRGASRSEILTLEPE  442
            LNR RLGLR +RL++ AER++LAY+WPGNVRELEHV+SRAAL++LS++ SR  +L++E+ 
Sbjct  411  LNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAA  470

Query  443  LLDLDSHVAGTeapapaeqpvavDEILPLRQTVDAAQRRAIVYALEASGENWAQAARLLD  502
             L+L+  V+   APA+   ++A +   +L+ +VD+ QR+ +  AL+    +WA AAR L+
Sbjct  471  GLGLE--VTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALE  528

Query  503  VDPSNLHKLARRLKL  517
            +DPSNL+KLARRL+L
Sbjct  529  MDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  492 bits (1855),  Expect = 2e-140, Method: Compositional matrix adjust.
 Identities = 296/512 (58%), Positives = 397/512 (78%), Gaps = 9/512 (1%)

Query  2    FDDSILLDLTSELPRSVRQERLVVAIRTYFGCGAVGLLKLDGDCLCPVAVDGLAHETLGR  61
            F + +L DL S+LP +VR +RLV ++R  F C+AV LL+LDGD L   A  GL  E LGR
Sbjct  41   FLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGR  100

Query  62   RFVVAQHPRLVTILSSRSAVRFEPGSPLPDPYDGLLDSQRGMPLPVHDCMGISLYLEGRL  121
             F V +HPRL  IL    +VRF ++S LPDPYDGLL+   + PLPVHDCMG++L ++GRL
Sbjct  101  SFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRL  160

Query  122  WGALTLDAFDGCVFDEQAGDKLAHSAILAEAVVRMSRLEEEIRASRAGSLVSETLLVDeq  181
            WGA+TLDA+    FD   + +L + A L E+ +R+++LE+E+R+ R    ++ + LV+  
Sbjct  161  WGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLR----LARSGLVEPA  216

Query  182  gsgegeiigqsAILLKLLHELDVVANSELPVLLLGETGVGKELFARRLHRKSPRHNAPLI  241
              ++  I+G+S++L  LL EL +VA++ELPVLL GETGVGKELFA++LH +SPR   P++
Sbjct  217  VESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  242  HVNCAALPESLAESELFGHVKGAFSGAMSDRPGRFEAANGGTLFLDEVGELPLTVQAKLL  301
            HVNCAALPE+LAESELFGHV+GAFSGA  DR GRFE+A+GGTLFLDE+GELPL++QAKLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  302  RTLQNGEIQRLGADQPRKVDVRIIAATNRQLHEQVREGQFRADLYHRLSVYPVPIPPLRE  361
            R+LQ+GEIQRLGAD+P+ V+VRIIAATNR L E+VR G+FRADLYHRLSVYPV IPPLRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  362  RGNDVLLLAGNFLELNRARLGFRSLRLSPAAEQALCSYDWPGNVRELEHVISRAALRAVS  421
            RG+DVL+LAG+FLELNR RLG+R LRL++ AE+++ +Y WPGNVRELEHVISRAAL+ +S
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  422  RGALRTEIVTLEPEHLALDATIIRTINKAENALIPEIESNEPAVSLKIAVDGYQRQLIRQ  481
            ++  R  ++++E+  L+L+ T       +  A +P   + E + SL+ AVD+YQRQL+++
Sbjct  457  QAESRHALLSIEAAGLGLEVT-----THPAPASVPAAIAGETPYSLQAAVDSYQRQLLQD  511

Query  482  TLEICQGNWANVARRLELDPSNLHKLAKRLGL  513
            +L+  +G+WA  AR LE+DPSNL+KLA+RL L
Sbjct  512  ALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  481 bits (1812),  Expect = 5e-137, Method: Compositional matrix adjust.
 Identities = 314/506 (63%), Positives = 408/506 (81%), Gaps = 5/506 (0%)

Query  4    ESLAADLIVELPNAVRLQRLVQTLREYFNSGAVGLLRLDDDSLRPVATVGLVHEALGRRF  63
            + L ADL  +LP AVRLQRLV +LR+ FN +AV LLRLD+D L+  A+VGL  E LGR F
Sbjct  43   NRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSF  102

Query  64   VIAQHPRLAAIMASREPTWFEPDSRLPDPYDGLLDNHVGEPLPVHDCMGVSLYVEGRLWG  123
             + +HPRLA I+   EP +F +DS LPDPYDGLL++  + PLPVHDCMG++L V+GRLWG
Sbjct  103  QVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWG  162

Query  124  AITLDALHAGTFDSRAREELKRCTLQIEAAVRVTRLEQENRSLRASRSDQTDLRLPAEEG  183
            A+TLDAL++G+FD+     L+ C+  IE+A+R+ +LE+E R+LR +RS+  +  + ++++
Sbjct  163  AVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS  222

Query  184  EILGRSEGLQQLLNELDVLADSELPVLLLGETGVGKELFARRLHRLSRRGHKPLVQVNCA  243
             ILG S  L+ LL+EL ++AD+ELPVLL GETGVGKELFA++LH  S R+++P+V+VNCA
Sbjct  223  -ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  244  ALPESLAESELFGHVKGAFSGATADRAGRFDAANGGTLFLDEVGELPLSVQAKLLRTLQN  303
            ALPE+LAESELFGHV+GAFSGAT DR GRF++A+GGTLFLDE+GELPL++QAKLLR+LQ+
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  304  GEIQRLGADKPLHVDVRIIAATNRHLPDSIRDGLFRADLYHRLSVYPVPIPPLRERGHDV  363
            GEIQRLGAD+P HV+VRIIAATNR L + +R G FRADLYHRLSVYPV IPPLRERGHDV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  364  LMLAGHFlelnrtrlglrglrlSPAAEQALLAYSWPGNVRELEHVISRAALKQLSRGASR  423
            LMLAGHFLELNR RLGLR LRL++ AE+++LAY+WPGNVRELEHVISRAALK LS++ SR
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  424  SLIMTLEPQVLDLDVNasaasaqalpeqalqaldapVQPLSEAVDGCQRQAILKALERCG  483
              ++++E+  L+L+V + +A+A   +  A ++      +L  AVD+ QRQ +  AL+R  
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY----SLQAAVDSYQRQLLQDALQRHN  517

Query  484  QNWAGAARLLEVDPSNLHKLARRLGL  509
             +WAGAAR LE+DPSNL+KLARRL L
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  479 bits (1807),  Expect = 1e-136, Method: Compositional matrix adjust.
 Identities = 314/506 (63%), Positives = 407/506 (81%), Gaps = 5/506 (0%)

Query  4    ESLAADLIVELPNAVRLQRLVQTLREYFNSGAVGLLRLDDDSLRPVATVGLVHEALGRRF  63
            + L ADL  +LP AVRLQRLV +LR+ FN +AV LLRLD+D L+  A+VGL  E LGR F
Sbjct  43   NRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSF  102

Query  64   VIAQHPRLAAIMASREPTWFEPDSRLPDPYDGLLDSHVGEPLPVHDCMGVSLYVEGRLWG  123
             + +HPRLA I+   EP +F +DS LPDPYDGLL+   + PLPVHDCMG++L V+GRLWG
Sbjct  103  QVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWG  162

Query  124  AITLDALHAGTFDSRAREELKRCTLQIEAAVRVTRLEQENRSLRASRSDPADLRLPAEEG  183
            A+TLDAL++G+FD+     L+ C+  IE+A+R+ +LE+E R+LR +RS+  +  + ++++
Sbjct  163  AVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS  222

Query  184  EILGRSEGLQQLLNELDVLADSELPVLLLGETGVGKELFARRLHRLSRRGHKPLVQVNCA  243
             ILG S  L+ LL+EL ++AD+ELPVLL GETGVGKELFA++LH  S R+++P+V+VNCA
Sbjct  223  -ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  244  ALPESLAESELFGHVKGAFSGATTDRAGRFDAANGGTLFLDEVGELPLSVQAKLLRTLQN  303
            ALPE+LAESELFGHV+GAFSGAT DR GRF++A+GGTLFLDE+GELPL++QAKLLR+LQ+
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  304  GEIQRLGADKPLHVDVRIIAATNRHLPDSIRDGLFRADLYHRLSVYPVPIPPLRERGHDV  363
            GEIQRLGAD+P HV+VRIIAATNR L + +R G FRADLYHRLSVYPV IPPLRERGHDV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  364  LMLAGHFlelnrtrlglrglrlSPAAEQALLAYSWPGNVRELEHVISRAALKQLSRGASR  423
            LMLAGHFLELNR RLGLR LRL++ AE+++LAY+WPGNVRELEHVISRAALK LS++ SR
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  424  SLIMTLEPQVLDLDVNasaasaqalpeqalqaldapVQPLSEAVDGCQRQAILKALERCG  483
              ++++E+  L+L+V + +A+A   +  A ++      +L  AVD+ QRQ +  AL+R  
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY----SLQAAVDSYQRQLLQDALQRHN  517

Query  484  QNWAGAARLLEVDPSNLHKLARRLGL  509
             +WAGAAR LE+DPSNL+KLARRL L
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  477 bits (1798),  Expect = 6e-136, Method: Compositional matrix adjust.
 Identities = 296/503 (59%), Positives = 401/503 (80%), Gaps = 4/503 (0%)

Query  6    LLADLVTELPHAVRYQRLMNAMREYFRCGAVALLRADGDSLRPLAAEGLVQETLGRRFII  65
            LLADL ++LP AVR QRL+ ++R+ F C+AV LLR DGD L+  AA GL  E LGR F +
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  66   AQHPRLAAILASRRPVCFASDSGLPDPYDGLLESCVGEPLPVHDCMGVSLYVDGLLWGAV  125
             +HPRLA IL    PV FA+DS LPDPYDGLL+   + PLPVHDCMG++L V+G LWGAV
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  126  TLDALQEGTFDAQAQQDLARFTLIIEASVRVTRLEQERRNLALMRQDGDRRGVTQDESEI  185
            TLDAL+ G+FDA   + L   + +IE+++R+ +LE+E R L L R +    +V + ++ I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV-ESQNSI  223

Query  186  IGSSDCIRNLLRELDVVADSELPVLLMGETGVGKELFARRLHGRSPRRERPLIHVNCAAL  245
            +G S  +R LL+EL +VAD+ELPVLL GETGVGKELFA++LH+ SPR  +P++HVNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  246  PESLVESELFGHSKGAFSGASADRAGRFEAAHGGVIFLDEVGELPLSVQAKLLRTLQNGE  305
            PE+L ESELFGH +GAFSGA+ DR GRFE+A GG +FLDE+GELPL++QAKLLR+LQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  306  IQRLGEDKPRQVDVRVIAATNRQLKESVRSGDFRADLYHRLSVYPVWIPPLRERDADVLV  365
            IQRLG D+P++V+VR+IAATNR L E VR G FRADLYHRLSVYPV IPPLRER+ DVL+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  366  LAGHFLELNrsrlgvrslrlsrAAEQALCAYSWPGNVRELEHVISRAALKAISRGASRND  425
            LAGHFLELNR RLG+R LRL+  AE+++ AY+WPGNVRELEHVISRAALK +S++ SR+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  426  IVTLDAALLDLDYGEEATAPSESPPLTLAKVTHVRSLRATVEDCQREAIREAVNRHDGSW  485
            +++++AA L+L+   +++++S +++++ +      SL+A+V+  QR+ +++A++RH+G W
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIA-GETPY--SLQAAVDSYQRQLLQDALQRHNGKW  520

Query  486  AAAARELEVDSSNLHKMAKKLGL  508
            A+AAR LE+D+SNL+K+A++L L
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  463 bits (1746),  Expect = 8e-132, Method: Compositional matrix adjust.
 Identities = 297/500 (60%), Positives = 400/500 (80%), Gaps = 1/500 (0%)

Query  5    LLTDLVVDLPAAVRLQRLAAGLRAHFRCGAVALLQLEADHLRPVAVDGLTQDALGRRFAV  64
            LL+DL  DLPAAVRLQRL A+LR +F C+AV LL+L++D+L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  65   QQHPRLAAILARRGVTCFHHDSTLPDPYDGLINGMAGEPLPVHDCMGTSLHIEGQPWGVL  124
            ++HPRLA IL       F  DS LPDPYDGL+++ ++ PLPVHDCMG +L+++G+ WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  125  TLDALEVGTFDAEAQSDLRDMIVLVEAALRVTRLEAETRALRVARGalpadsaladdsEI  184
            TLDAL  G+FDA     LR+   L+E+ALR+ +LE E R+LR+AR++L   +  +++  I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN-SI  223

Query  185  LGQSEAIARLLHEIEVVADSELPILLLGETGVGKELFAHRVHRQSRRRGKPLVHVNCAAL  244
            LG+S  +  LL E+ +VAD+ELP+LL GETGVGKELFAH++H +S R  +P+VHVNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  245  PESLAESELFGHAKGAFSGALTERPGRFEAANGGTLFLDEVGELPLAVQAKLLRTLQNGE  304
            PE+LAESELFGH +GAFSGA  +R GRFE+A+GGTLFLDE+GELPLA+QAKLLR+LQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  305  IQRLGDDRPRTVDVRIVAATNRDLRDRVRQGDFRADLYHRLSVYPVPIPPLRKRGRDVLL  364
            IQRLG DRP+ V+VRI+AATNR L + VR+G FRADLYHRLSVYPV IPPLR RG+DVL+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  365  LAGRYLElnrarlglrslrlSPEAEDMLSRYRWPGNVRELEHVISRAAIKAVSHGAHRNE  424
            LAG++LELNR RLGLR LRL+++AE  +  Y WPGNVRELEHVISRAA+K +S++  R+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  425  IVTLGPGLLDLDDVampapppeapalpagaaqpLRVAVDACQRQAIRRALQAHQGSWAGA  484
            ++++ ++ L+L+  + PAP++ ++A+++ ++ +L+ AVD+ QRQ ++ ALQ H+G WAGA
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGA  523

Query  485  ARALDIDSSNLHKLARRLGL  504
            ARAL++D+SNL+KLARRL L
Sbjct  524  ARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  462 bits (1742),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 291/505 (58%), Positives = 387/505 (77%), Gaps = 7/505 (1%)

Query  8    LLTDLVTDLPHAVRLQRLVSGLRTHFRCGAVALLRLEEEHLRPVAVDGLVRDTLGRRFAV  67
            LL+DL +DLP AVRLQRLV++LR +F C+AV LLRL+ ++L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  68   SLHPRLAAILARRDVTCFHHDSMLPDPYDGLIDEHVGEPLPVHDCMGTSLHLDGRPWGVL  127
              HPRLA IL   +   F  DS LPDPYDGL+++  + PLPVHDCMG +L+++GR WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  128  TLDALTVGTFDAAAQAELQRLTVIVEAAIRTTRLEAEIRALQLARGKQPDGEGPADDGEI  187
            TLDAL  G+FDA+    L+  + ++E+A+R  +LE E+R+L+LAR+   +    ++++ I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS-I  223

Query  188  IGQSQAIAGLLHELEVVADTDLPVLLLGETGVGKELFAhrlhrhsrrrghPLVHVNCAAL  247
            +G+S  + GLL EL +VAD++LPVLL GETGVGKELFAH+LH +S R  +P+VHVNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  248  PESLAESELFGHARGAFSGATGERPGRFEAAAGGTLFLDEVGELPLSIQAKLLRTLQNGE  307
            PE+LAESELFGH RGAFSGAT +R GRFE+A+GGTLFLDE+GELPL+IQAKLLR+LQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  308  IQRLGSDRPRRVNVRVIAATNRNLREHVRDGSFRADLFHRLSVYPIPIPPLRERGNDVLL  367
            IQRLG+DRP++VNVR+IAATNR L E+VR G FRADL+HRLSVYP+ IPPLRERG+DVL+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  368  LAGRFLELNRARLGMRSLRLSAAAQDALRRYRWPGNVRELEHVISRAALRCVSRGADRND  427
            LAG+FLELNR RLG+R LRL+A A+ ++  Y WPGNVRELEHVISRAAL+ +S++  R+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  428  IVTleaelldldglelpagsahhaaeaaiahpalpTGATLREAVEQTQRACIEQALRAHD  487
            +++         +      ++H A+ +  A  A  T  +L+ AV+  QR  +++AL+ H+
Sbjct  464  LLS------IEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHN  517

Query  488  GSWAKAARQLGMDASNLHKLAKRLG  512
            G WA AAR L MD+SNL+KLA+RL 
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLN  542

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  460 bits (1735),  Expect = 5e-131, Method: Compositional matrix adjust.
 Identities = 294/513 (58%), Positives = 396/513 (78%), Gaps = 16/513 (3%)

Query  4    ESLLADLLTEQPAAVRLQNLVNTLRSHFNCGAVVLLKLDNEVLQPVAIQGLVREALGRRF  63
            + LLADL ++ PAAVRLQ LV +LR +FNC+AVVLL+LD + LQ  A  GL  E LGR F
Sbjct  43   NRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSF  102

Query  64   VVAQHPRLAALLASRNPVRFEHDSSLPDPYDGLLAEQPGNALPVHDCMGISLYLENKCWG  123
             V +HPRLA +L   +PVRF  DS LPDPYDGLL + P+ +LPVHDCMG++L ++ + WG
Sbjct  103  QVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWG  162

Query  124  VLTLDALQPGTFTDNSMIELQKFSLFVETAVRIGQLEQNVRALRQGQQRTMPKSGTTER-  182
             +TLDAL+PG+F  +    L+  + ++ETA+RIGQLE++VR+LR      +++SG  E  
Sbjct  163  AVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLR------LARSGLVEPA  216

Query  183  --NESEIIGHSKAIESVLKELRVVASADLPVLLLGETGVGKELFARELHILSQRSDKPLI  240
              +++ I+G+S  + ++LKEL++VA A+LPVLL GETGVGKELFA+ LH  S R+ +P++
Sbjct  217  VESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  241  YVNCAALPESLAESELFGHVKGAFSGATSDRSGRFEVAHGGTLFLDEVGELPLSIQAKLL  300
             VNCAALPE+LAESELFGHV+GAFSGAT DR GRFE A GGTLFLDE+GELPL+IQAKLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  301  RVLQNGEIQRLGSDKYRKVDVRLIAATNRNLRQQVSNETFRADLYHRLSVYPLPIPPLRE  360
            R LQ+GEIQRLG+D+ + V+VR+IAATNR L ++V +  FRADLYHRLSVYP+ IPPLRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  361  RGDDVSILAGHFlelnrarlglralrlSPEAELAIQQYQWPGNVRELEHVISRAAIKLLS  420
            RG+DV +LAGHFLELNR RLGLR LRL+++AE ++  Y WPGNVRELEHVISRAA+K+LS
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  421  HGVEKTDIATIEPDMLDLDVQLPFSATTDSGKNSVGASLPPANV-SMKEAVNYTQRKMIE  479
            ++  +  + +IE+  L+L+V      TT+++  SV A+++     S++ AV+  QR++++
Sbjct  457  QAESRHALLSIEAAGLGLEV------TTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQ  510

Query  480  SALGRHNNSWSQAAKDLQLDASNLHKMASRLGM  512
             AL RHN  W+ AA+ L++D+SNL+K+A RL +
Sbjct  511  DALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  460 bits (1735),  Expect = 5e-131, Method: Compositional matrix adjust.
 Identities = 294/513 (58%), Positives = 396/513 (78%), Gaps = 16/513 (3%)

Query  4    ESLLADLLTEQPAAVRLQNLVNTLRSHFNCGAVVLLKLDNEVLQPVAIQGLVREALGRRF  63
            + LLADL ++ PAAVRLQ LV +LR +FNC+AVVLL+LD + LQ  A  GL  E LGR F
Sbjct  43   NRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSF  102

Query  64   VVAQHPRLAALLASRNPVRFEHDSSLPDPYDGLLAEQPGNALPVHDCMGISLYLENKCWG  123
             V +HPRLA +L   +PVRF  DS LPDPYDGLL + P+ +LPVHDCMG++L ++ + WG
Sbjct  103  QVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWG  162

Query  124  VLTLDALQPGTFTDNSMIELQKFSLFVETAVRIGQLEQNVRALRQGQQRTMPKSGTTER-  182
             +TLDAL+PG+F  +    L+  + ++ETA+RIGQLE++VR+LR      +++SG  E  
Sbjct  163  AVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLR------LARSGLVEPA  216

Query  183  --NESEIIGHSKAIESVLKELRVVASADLPVLLLGETGVGKELFARELHILSQRSDKPLI  240
              +++ I+G+S  + ++LKEL++VA A+LPVLL GETGVGKELFA+ LH  S R+ +P++
Sbjct  217  VESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  241  YVNCAALPESLAESELFGHVKGAFSGATSDRSGRFEVAHGGTLFLDEVGELPLSIQAKLL  300
             VNCAALPE+LAESELFGHV+GAFSGAT DR GRFE A GGTLFLDE+GELPL+IQAKLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  301  RVLQNGEIQRLGSDKYRKVDVRLIAATNRNLRQQVSNETFRADLYHRLSVYPLPIPPLRE  360
            R LQ+GEIQRLG+D+ + V+VR+IAATNR L ++V +  FRADLYHRLSVYP+ IPPLRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  361  RGDDVSILAGHFlelnrarlglralrlSPEAELAIQQYQWPGNVRELEHVISRAAIKLLS  420
            RG+DV +LAGHFLELNR RLGLR LRL+++AE ++  Y WPGNVRELEHVISRAA+K+LS
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  421  HGVEKTDIATIEPDMLDLDVQLPFSATTDSGKNSVGASLPPANV-SMKEAVNYTQRKMIE  479
            ++  +  + +IE+  L+L+V      TT+++  SV A+++     S++ AV+  QR++++
Sbjct  457  QAESRHALLSIEAAGLGLEV------TTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQ  510

Query  480  SALGRHNNSWSQAAKDLQLDASNLHKMASRLGM  512
             AL RHN  W+ AA+ L++D+SNL+K+A RL +
Sbjct  511  DALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  460 bits (1734),  Expect = 6e-131, Method: Compositional matrix adjust.
 Identities = 289/488 (60%), Positives = 383/488 (79%), Gaps = 2/488 (0%)

Query  18   RLQRLVSSLRTHFRCGAVALLQLEEDHLRPIAVDGLTQDALGRRFAVQQHPRLAAILARR  77
            RLQRLV+SLR +F C+AV LL+L+ D+L+  A  GL  + LGR F V++HPRLA IL   
Sbjct  58   RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEG  117

Query  78   GVTCFHHDSTLPDPYDGLINGMAGEPLPVHDCMGTSLHIEGRPWGVLTLDALEVGTFDAE  137
                F  DS LPDPYDGL+++ ++ PLPVHDCMG +L+++GR WG +TLDAL  G+FDA 
Sbjct  118  EPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDAS  177

Query  138  AQSDLRDYIVLLEAALRTTRLEAEIRALRVARGAEPADSAVADNNEILGQSEAIGRLLHE  197
                LR+   L+E+ALR  +LE E+R+LR+AR++   ++AV  +N ILG+S  +  LL E
Sbjct  178  VARRLRECAPLIETALRIGQLENEVRGLRLARSG-LVEPAVESQNSILGDSPVLRGLLKE  236

Query  198  IQVVADSELPILLLGETGVGKELFAHRVHRLSRRRDKPLVHVNCAALPESLAESELFGHA  257
            +++VAD+ELP+LL GETGVGKELFAH++H  S R  +P+VHVNCAALPE+LAESELFGH 
Sbjct  237  LKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHV  296

Query  258  KGAFSGAVADRPGRFEAANGGTLFLDEVGELPLLVQAKLLRTLQNGEIQRLGDDRPRRVD  317
            +GAFSGA  DR GRFE+A+GGTLFLDE+GELPL +QAKLLR+LQ+GEIQRLG DRP++V+
Sbjct  297  RGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVN  356

Query  318  VRILAATNRSLRDLVRAGDFRADLYHRLSVYPIPIPPLRDRGNDVLLLAGRYLElnrarl  377
            VRI+AATNR+L + VR G FRADLYHRLSVYP+ IPPLR+RG+DVL+LAG++LELNR RL
Sbjct  357  VRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRL  416

Query  378  glrslrlSPEAEDMLRRYRWPGNVRELEHVISRAAIKAVSHGATRNEIVTLGAKLLDLSD  437
            GLR LRL+++AE  +  Y WPGNVRELEHVISRAA+K +S++ +R+ ++++ A  L+L  
Sbjct  417  GLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGLEV  476

Query  438  GDMPVAAPQDNADASVGPDQTLREAVDACQRQAIRRALESHQGNWAHAARALGVDASNLH  497
               P +A+   A A+  P  +L+ AVD+ QRQ ++ AL+ H+G+WA AARAL +D+SNL+
Sbjct  477  TTHPAPASVPAAIAGETP-YSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLR  535

Query  498  KLARRIGL  505
            KLARR+ L
Sbjct  536  KLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  451 bits (1699),  Expect = 4e-128, Method: Compositional matrix adjust.
 Identities = 294/501 (59%), Positives = 399/501 (80%), Gaps = 2/501 (0%)

Query  5    FLADLVANLAPAIRMQRLVSTLRTHFRCGAVALLQLEAEHLRPIAVDGLVRDALGRRFAV  64
            +LADL ++L++A+R+QRLV++LR +F C+AV LL+L++++L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  65   SQHPRLAAILTRRDVTRFHHDSTLPDPYDGLIDEHIGEPLPVHDCMGISLHVEGQPWGVL  124
             +HPRLA IL   +  RF  DS LPDPYDGL+++  + PLPVHDCMG++L+V+G+ WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  125  TLDALQIGTFDDIAQTELQQLSMVIEASIRITRLEAEIRALRLTRGDAPVDSSKQESEII  184
            TLDAL+ G+FD      L++ + +IE+++RI +LE E+R+LRL+R++    +   ++ I+
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSIL  224

Query  185  GQSEAIGQLLHELRVVADSELPVLLLGETGVGKELFAhrlhrhsrrhAKPLVHVNCAALP  244
            G+S  +  LL EL++VAD+ELPVLL GETGVGKELFAH+LH +S R  +P+VHVNCAALP
Sbjct  225  GDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALP  284

Query  245  ESLAESELFGHAKGAFSGAISDRPGRFEAAEGGTLFLDEVGELPLAVQAKLLRTLQNGEI  304
            E+LAESELFGH +GAFSGA  DR GRFE+A GGTLFLDE+GELPLA+QAKLLR+LQ+GEI
Sbjct  285  ETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEI  344

Query  305  QRLGADRPRRVNVRVIAATNRNLRDLVRDGAFRADLYHRLSVYPLPIPPLRERGNDVLLL  364
            QRLGADRP++VNVR+IAATNR L + VR G FRADLYHRLSVYP+ IPPLRERG+DVL+L
Sbjct  345  QRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLML  404

Query  365  AGRFLElnrarlglrslrlSTDAQAALRRYRWPGNVRELEHVISRAALKTLSRGVNRNdi  424
            AG+FLELNR RLGLR LRL++DA+ ++  Y WPGNVRELEHVISRAALK LS++ +R+ +
Sbjct  405  AGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHAL  464

Query  425  itleaelldldalelppalttQTALPGITLAVSSLRDAVATCERHSIQQALDASGGSWAQ  484
            +++EA  L+L+    P++ +  +A++G T    SL+ AV + +R+ +Q+AL+   G WA 
Sbjct  465  LSIEAAGLGLEVTTHPAPASVPAAIAGET--PYSLQAAVDSYQRQLLQDALQRHNGKWAG  522

Query  485  AARQLDVDASNLHKLARRLGL  505
            AAR L++D+SNL+KLARRL L
Sbjct  523  AARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  449 bits (1693),  Expect = 1e-127, Method: Compositional matrix adjust.
 Identities = 300/510 (59%), Positives = 391/510 (77%), Gaps = 12/510 (2%)

Query  21   LLADLVTDLPHAVRLQRLVSMLRTHFRCGAVALLRLEEDHLRPVAVDGLVRDALGRRFAV  80
            LLADL +DLP AVRLQRLV+ LR +F C+AV LLRL+ D+L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  81   GLHPRLAAILARRGVTCFHHDSVLPDPYDGLIDEHVGEPLPVHDCMGTSLAVDGQPWGAL  140
              HPRLA IL       F  DS LPDPYDGL+++  + PLPVHDCMG +L V+G+ WGA+
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  141  TLDALAIGTFDAAAQAELQRLTVIVEAAIRTTRLEGEIRALQLARGTPDADEGTAQHGDI  200
            TLDAL  G+FDA+    L+  + ++E+A+R  +LE E+R+L+LAR+        +Q++  
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS--  222

Query  201  GGEIIGQSEAIANLLHELEVVADTDLPVLLLGETGVGKELFAHRLHRQSRRRAQPLVHVN  260
               I+G+S  +  LL EL +VAD++LPVLL GETGVGKELFAH+LH +S R  QP+VHVN
Sbjct  223  ---ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVN  279

Query  261  CAALPESLAESELFGHARGAFSGATGERPGRFEAADGGTLFLDEVGELPLAIQAKLLRTL  320
            CAALPE+LAESELFGH RGAFSGAT +R GRFE+A GGTLFLDE+GELPLAIQAKLLR+L
Sbjct  280  CAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRAL  339

Query  321  QNGEIQRLGSDRPRRVNVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPLRERGN  380
            Q+GEIQRLG+DRP++VNVR+IAATNR L E+VR G FRADLYHRLSVYP+ IPPLRERG+
Sbjct  340  QSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGH  399

Query  381  DVLLLAGRFLELNrarlglrslrlsggaQDALRSYRWPGNVRELEHVISRAALRAVSRGA  440
            DVL+LAG+FLELNR RLGLR LRL+++A+ ++ +Y WPGNVRELEHVISRAAL+ +S++ 
Sbjct  400  DVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAE  459

Query  441  GRNDIVTLEPELLDLYGLDVPaahhagagmasafaapalaagITLRDAVEQTQRACIEQA  500
            +R+ ++++E+  L   GL+V     + ++ AS  AA A  +  +L+ AV+  QR  +++A
Sbjct  460  SRHALLSIEAAGL---GLEVT----THPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDA  512

Query  501  LTDQGGNWAQAARQLGIDASNLHKLAKRLG  530
            L  + G+WA AAR L +D+SNL+KLA+RL 
Sbjct  513  LQRHNGKWAGAARALEMDPSNLRKLARRLN  542

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  445 bits (1676),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 294/504 (59%), Positives = 390/504 (78%), Gaps = 7/504 (1%)

Query  5    LMADLVADLPPAVRLQRLVSGLRTHFRCGAVALLQLEEDHLRPIAVDGLVQDALGRRFAV  64
            L+ADL +DLP+AVRLQRLV++LR +F C+AV LL+L+ D+L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  65   GQHPRLAAILGRRGITCFHHDSTLPDPYDGLIDEHAGQPLPVHDCMGASLHVEGQPWGVL  124
             +HPRLA IL       F  DS LPDPYDGL+++ ++ PLPVHDCMG +L+V+G+ WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  125  TLDALQVGTFDAEARAELQRVTLLVEAAVRTTRLEAEIRalravrgaaatdaaevgtgge  184
            TLDAL+ G+FDA     L+  + L+E+A+R  +LE E+R+LR  R++    A E   +  
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS--  222

Query  185  VLGQSPAIAHLLHELQVVADSELPVLLLGETGVGKELFAHRLQQLSRRRAKPLVHVNCAA  244
            +LG+SP +  LL EL++VAD+ELPVLL GETGVGKELFAH+L+  S R  +P+VHVNCAA
Sbjct  223  ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAA  282

Query  245  LPESLAESELFGHAKGAFSGAISERPGRFDAANHGTLFLDEVGELPLAVQAKLLRTLQNG  304
            LPE+LAESELFGH +GAFSGA  +R GRF++A+ GTLFLDE+GELPLA+QAKLLR+LQ+G
Sbjct  283  LPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSG  342

Query  305  EIQRLGDDRPRHVDVRIIAATNRNLRDLVRDGAFRADLYHRLSVYPIPIPPLRERGDDVL  364
            EIQRLG DRP+HV+VRIIAATNR L + VR G FRADLYHRLSVYP+ IPPLRERG+DVL
Sbjct  343  EIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVL  402

Query  365  LLAGRFLEINrarlglrslrlsaDAQDALRRYRWPGNVRELEHVLSRAAIKAVGRGVRTN  424
            +LAG+FLE+NR RLGLR LRL+ADA+ ++  Y WPGNVRELEHV+SRAA+K ++++   +
Sbjct  403  MLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRH  462

Query  425  EIVTleaalldldglpaaSGPAARAVTASLPASVP--LRIAVETSQRDAIRAALAAHDGN  482
             +++         GL  ++ PA+ +V A++++  P  L+ AV++ QR+ ++ AL  H+G+
Sbjct  463  ALLS---IEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGK  519

Query  483  WARAARALEIDPSNLHKLARRLGL  506
            WA AARALE+DPSNL+KLARRL L
Sbjct  520  WAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  445 bits (1675),  Expect = 3e-126, Method: Compositional matrix adjust.
 Identities = 300/510 (59%), Positives = 390/510 (77%), Gaps = 12/510 (2%)

Query  10   LLADLVTDLPHAVRLQRLVSMLRTHFRCGAVALLRLEEDHLRPVAVDGLVRDALGRRFAV  69
            LLADL +DLP AVRLQRLV+ LR +F C+AV LLRL+ D+L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  70   GLHPRLAAILARRGVTCFHHDSMLPDPYDGLIDEHVGEPLPVHDCMGTSLAVDGQPWGAL  129
              HPRLA IL       F  DS LPDPYDGL+++  + PLPVHDCMG +L V+G+ WGA+
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  130  TLDALAIGTFDAAAQAELQRLTVIVEAAIRTTRLEGEIRALQLARGTPEADEGTAQHGDI  189
            TLDAL  G+FDA+    L+  + ++E+A+R  +LE E+R+L+LAR+        +Q++  
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS--  222

Query  190  GGEIIGQSEAIANLLHELEVVADTDLPVLLLGETGVGKELFAHRLHRQSRRRAQPLVHVN  249
               I+G+S  +  LL EL +VAD++LPVLL GETGVGKELFAH+LH +S R  QP+VHVN
Sbjct  223  ---ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVN  279

Query  250  CAALPESLAESELFGHARGAFSGATGERPGRFEAADGGTLFLDEVGELPLAIQAKLLRTL  309
            CAALPE+LAESELFGH RGAFSGAT +R GRFE+A GGTLFLDE+GELPLAIQAKLLR+L
Sbjct  280  CAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRAL  339

Query  310  QNGEIQRLGSDRPRRVNVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPLRERGN  369
            Q+GEIQRLG+DRP++VNVR+IAATNR L E+VR G FRADLYHRLSVYP+ IPPLRERG+
Sbjct  340  QSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGH  399

Query  370  DVLLLAGRFLELNrarlglrslrlsggaQDALRSYRWPGNVRELEHVISRAALRAVSRGA  429
            DVL+LAG+FLELNR RLGLR LRL+++A+ ++ +Y WPGNVRELEHVISRAAL+ +S++ 
Sbjct  400  DVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAE  459

Query  430  GRNDIVTlepelldldgleVPaahhagagmasafaapalaagITLRDAVEQTQRACIEQA  489
            +R+ ++++E+  L+L+    P       + AS  AA A  +  +L+ AV+  QR  +++A
Sbjct  460  SRHALLSIEAAGLGLEVTTHP-------APASVPAAIAGETPYSLQAAVDSYQRQLLQDA  512

Query  490  LKDQGGNWAQAARQLGIDASNLHKLARRLG  519
            L+ + G+WA AAR L +D+SNL+KLARRL 
Sbjct  513  LQRHNGKWAGAARALEMDPSNLRKLARRLN  542

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  442 bits (1663),  Expect = 3e-125, Method: Compositional matrix adjust.
 Identities = 294/495 (60%), Positives = 381/495 (77%), Gaps = 5/495 (1%)

Query  15   PSAVRLQSLVRMMREHFGCGAVCLLRLQDGVLSPVAVEGLVREALGRRFVVAQHPRLAAI  74
            P+AVRLQ LV  +R++F C+AV LLRL+++ L   A  GL  E LGR F V +HPRLA I
Sbjct  54   PAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARI  113

Query  75   LASRSTVAFAPDSPLPDPYDGLLEHHVGEALPVHDCMGISLYVNGEQWGALTLDALTAGT  134
            L     V FA+DS LPDPYDGLL++  + +LPVHDCMG++L V+G  WGA+TLDAL +G+
Sbjct  114  LEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGS  173

Query  135  FDQDAQDSLQRLALTVAAAVRMTRLERDIRALRLARQDAPVPLGDHQEGEILGQSTGLKR  194
            FD      L+  A  + +A+R+ +LE ++R+LRLAR +   P  + Q++ ILG+S  L+ 
Sbjct  174  FDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS-ILGDSPVLRG  232

Query  195  LLHELDVVADSDLPVLLTGETGVGKDLFARRLHQRSPRRDRPLVQVNCAALPESLAESEL  254
            LL EL +VAD++LPVLL GETGVGK+LFA++LH  SPR  +P+V+VNCAALPE+LAESEL
Sbjct  233  LLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESEL  292

Query  255  FGHVKGAFSGAGNARPGRFEAADGGTLFLDEVGELPLGIQAKLLRALQNGEIQRLGEDAP  314
            FGHV+GAFSGA + R GRFE+A GGTLFLDE+GELPL+IQAKLLRALQ+GEIQRLG D P
Sbjct  293  FGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRP  352

Query  315  RKVNVRVIAATNRQLHDSVRDGHFRADLYHRLSVYPVPIPPLRERENDVLVLAGHFLELN  374
            + VNVR+IAATNR L + VR G+FRADLYHRLSVYPV IPPLRER +DVL+LAGHFLELN
Sbjct  353  KHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELN  412

Query  375  rgrlglrslrlsPAAERALCAYTWPGNVRELEHVISRAAIKALSRGADRADIITLEPELL  434
            R RLGLR LRL++ AER++ AY+WPGNVRELEHVISRAA+K LS++  R  ++++E+  L
Sbjct  413  RVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGL  472

Query  435  DLAGNEPLAQPVQAENKPAAVTPIPMVSLqqatnqaqqqaitqalaatDHNWAAAARLLE  494
            +L      ++P  A + PAA++     SLQ A +  Q+Q + +AL   + +WA+AAR LE
Sbjct  473  GLEVT---THPAPA-SVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALE  528

Query  495  VDPSNLHKLAKRLGM  509
            +DPSNL+KLA+RL +
Sbjct  529  MDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  441 bits (1661),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 287/496 (58%), Positives = 379/496 (77%), Gaps = 11/496 (2%)

Query  23   RLQRLVSALRTHFRCGAVALLRLEEDHLRPVAVDGLVGDALGRRFAVGLHPRLAAILARR  82
            RLQRLV++LR +F C+AV LLRL+ D+L+  A  GL  + LGR F V  HPRLA IL   
Sbjct  58   RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEG  117

Query  83   GVTCFHHDSMLPDPYDGLIDEHVGEPLPVHDCMGTRLEVDGQPWGALTLDALTVGTFDGA  142
                F  DS LPDPYDGL+++  + PLPVHDCMG  L V+G+ WGA+TLDAL  G+FD++
Sbjct  118  EPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDAS  177

Query  143  AQAELQRLTVIVEAAIRTTRLEGEIRALQLARGTPDAEEGAAPHDIGAEIIGQSEAIANL  202
                L+  + ++E+A+R  +LE E+R+L+LAR+    E +  +++    I+G+S  +  L
Sbjct  178  VARRLRECAPLIETALRIGQLENEVRGLRLARSGL-VEPAVESQN---SILGDSPVLRGL  233

Query  203  LHELEVVADTDLPVLLLGETGVGKELFAHRLHRQSRRRAQPLVHVNCAALPESLAESELF  262
            L EL +VAD++LPVLL GETGVGKELFAH+LH +S R  QP+VHVNCAALPE+LAESELF
Sbjct  234  LKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELF  293

Query  263  GHARGAFSGATGERPGRFEAADGGTLFLDEVGELPLAIQAKLLRTLQNGEIQRLGSDRPR  322
            GH RGAFSGAT +R GRFE+A GGTLFLDE+GELPLAIQAKLLR+LQ+GEIQRLG+DRP+
Sbjct  294  GHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPK  353

Query  323  RVNVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPLRERGNDVLLLAGRFLELNr  382
            +VNVR+IAATNR L E+VR G FRADLYHRLSVYP+ IPPLRERG+DVL+LAG+FLELNR
Sbjct  354  HVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNR  413

Query  383  arlglrslrlsggaQDALRHYRWPGNVRELEHVISRAALRAVSRGAGRNDIVTLAPELLD  442
             RLGLR LRL+++A+ ++  Y WPGNVRELEHVISRAAL+ +S++ +R+ ++++ +  L+
Sbjct  414  VRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLG  473

Query  443  LDGLEQPPATTDGasaasppampalpaGIALRDAVEQTQRACIAQALRDHGGNWAQAARQ  502
            L+   +P++++        PA  A  +  +L+ AV+  QR  + +AL+ H G+WA AAR 
Sbjct  474  LEVTTHPAPAS-------VPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARA  526

Query  503  LGIDASNLHKLARRLG  518
            L +D+SNL+KLARRL 
Sbjct  527  LEMDPSNLRKLARRLN  542

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  440 bits (1658),  Expect = 7e-125, Method: Compositional matrix adjust.
 Identities = 301/503 (60%), Positives = 394/503 (79%), Gaps = 6/503 (1%)

Query  6    LLTDLVADLPPAVRMQRLVGSLRTHFRCGAVALLKLEEDHLRPVAVDGLVRDALGRRFVV  65
            LL+DL +DLP+AVR+QRLV+SLR +F C+AV LL+L+ D+L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  66   GQHPRLAAILARHGVTCFHHDSTLPDPYDGLIDEQAGVPLPVHDCMGLGLQVEGRPWGVL  125
             +HPRLA IL       F  DS LPDPYDGL+++ ++ PLPVHDCMG+ L+V+GR WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  126  TLDALKVGTFDADAQaelgrlavvveaaarttrleaeiraLRATRADSPAGDATTDASEI  185
            TLDAL+ G+FDA     L   A ++E+A R  +LE E+R+LR +R++       ++ S I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS-I  223

Query  186  VGQSPAIHQLLHELEVVADSELPILVLGETGVGKELFVhrlhrlsrrrdrplvhVNCAAL  245
            +G+SP ++ LL EL +VAD+ELP+L+ GETGVGKELF H+LH  S R  +P+VHVNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  246  PESLAESELFGHVKGAFSGATGERPGRFEAADGGTLFLDEVGELPLTVQAKLLRALQNGE  305
            PE+LAESELFGHV+GAFSGAT +R GRFE+A GGTLFLDE+GELPL++QAKLLRALQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  306  IQRLGADRPRHVDVRVIAATNRNLRERVRDGAFRADLYHRLSVYPVPIPPLRERGNDILL  365
            IQRLGADRP+HV+VR+IAATNR L E VR G FRADLYHRLSVYPV IPPLRERG+D+L+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  366  LAGRFLEHNrarlglrslrlsPDAERALRSYPWPGNVRELEHVISRAALKVLSRGARRDD  425
            LAG+FLE NR RLGLR LRL++DAER++ +Y+WPGNVRELEHVISRAALKVLS++  R+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  426  IVTLGAELLDLDTEVASPDTSSPDVPQDVRPGTP--LRDAVADFQRRCIESALATHDDNW  483
            ++++ A  L+L+    + + +++ VP  +   TP  L+ AV  +QR+ ++ AL  H+++W
Sbjct  464  LLSIEAAGLGLEV---TTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKW  520

Query  484  ARAARALGLDASNLHKLARRLGL  506
            A AARAL +D+SNL+KLARRL L
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  440 bits (1658),  Expect = 7e-125, Method: Compositional matrix adjust.
 Identities = 301/503 (60%), Positives = 394/503 (79%), Gaps = 6/503 (1%)

Query  6    LLTDLVADLPPAVRMQRLVGSLRTHFRCGAVALLKLEEDHLRPVAVDGLVRDALGRRFVV  65
            LL+DL +DLP+AVR+QRLV+SLR +F C+AV LL+L+ D+L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  66   GQHPRLAAILARHGVTCFHHDSTLPDPYDGLIDEQAGVPLPVHDCMGLGLQVEGRPWGVL  125
             +HPRLA IL       F  DS LPDPYDGL+++ ++ PLPVHDCMG+ L+V+GR WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  126  TLDALKVGTFDADAQaelgrlavvveaaarttrleaeiraLRATRADSPAGDATTDASEI  185
            TLDAL+ G+FDA     L   A ++E+A R  +LE E+R+LR +R++       ++ S I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS-I  223

Query  186  VGQSPAIHQLLHELEVVADSELPILVLGETGVGKELFVhrlhrlsrrrdrplvhVNCAAL  245
            +G+SP ++ LL EL +VAD+ELP+L+ GETGVGKELF H+LH  S R  +P+VHVNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  246  PESLAESELFGHVKGAFSGATGERPGRFEAADGGTLFLDEVGELPLTVQAKLLRALQNGE  305
            PE+LAESELFGHV+GAFSGAT +R GRFE+A GGTLFLDE+GELPL++QAKLLRALQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  306  IQRLGADRPRHVDVRVIAATNRNLRERVRDGAFRADLYHRLSVYPVPIPPLRERGNDILL  365
            IQRLGADRP+HV+VR+IAATNR L E VR G FRADLYHRLSVYPV IPPLRERG+D+L+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  366  LAGRFLEHNrarlglrslrlsPDAERALRSYPWPGNVRELEHVISRAALKVLSRGARRDD  425
            LAG+FLE NR RLGLR LRL++DAER++ +Y+WPGNVRELEHVISRAALKVLS++  R+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  426  IVTLGAELLDLDTEVASPDTSSPDVPQDVRPGTP--LRDAVADFQRRCIESALATHDDNW  483
            ++++ A  L+L+    + + +++ VP  +   TP  L+ AV  +QR+ ++ AL  H+++W
Sbjct  464  LLSIEAAGLGLEV---TTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKW  520

Query  484  ARAARALGLDASNLHKLARRLGL  506
            A AARAL +D+SNL+KLARRL L
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  440 bits (1658),  Expect = 8e-125, Method: Compositional matrix adjust.
 Identities = 304/516 (59%), Positives = 395/516 (77%), Gaps = 19/516 (3%)

Query  23   ADMAAELPQAVRLQRLVDLLRTQFGCGavallrleeerlrpvavTGLVSDALGRRFAVGQ  82
            AD++++LP AVRLQRLV  LR +F C+AV LLRL+ +RL+  A  GL  + LGR F V +
Sbjct  47   ADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVER  106

Query  83   HPRLAAILTRREVTCFEHDSQLPDPYDGLLDTLVGEPLPVHDCMGVALHVEGRPWGVLTL  142
            HPRLA IL   E   F  DS+LPDPYDGLL+   + PLPVHDCMG++L+V+GR WG +TL
Sbjct  107  HPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTL  166

Query  143  DALATGTFGPAARQRLGQWVPLVEAVVRVARLEQELRTLRMAATGPAEGDLALATPERGG  202
            DAL  G+F+++  +RL +  PL+E+ +R+++LE+E+R LR+A +G  E  +         
Sbjct  167  DALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE--------  218

Query  203  AGELEIVGESPALKRLLHELSVVAASELPVLLLGETGVGKELFARLLHHQSPRRARPLVH  262
             ++  I+G+SP L+ LL EL +VA +ELPVLL GETGVGKELFA+ LH +SPR  +P+VH
Sbjct  219  -SQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  263  VNCAALPESLAESELFGHVRGAFSGAVSDRAGRFEAAEGGTLFLDEVGELPLSVQAKLLR  322
            VNCAALPE+LAESELFGHVRGAFSGA  DR GRFE+A GGTLFLDE+GELPL++QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  323  TLQNGEIQRLGADRPRSVHVRVIAATNRNLREQVASGAFRADLYHRLSVYPVPIPPLRER  382
            +LQ+GEIQRLGADRP+ V+VR+IAATNR L E+V  G FRADLYHRLSVYPV IPPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  383  GNDVLVLAGRFLElnrarlglrslrlSPDAQAALRRYRWPGNVRELEHVISRAALKALSR  442
            G+DVL+LAG+FLELNR RLGLR LRL++DA+ ++  Y WPGNVRELEHVISRAALK LS+
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  443  GVDRNEIVTleaglldldaldePVATPRSDapmapaaggalslaaptgtlRDAVDACQRQ  502
            +  R+ ++++EA+ L+L+   +P +++            A   +    +L+ AVD+ QRQ
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPAS----------VPAAIAGETPYSLQAAVDSYQRQ  507

Query  503  VLNAALVAHGGNWAQAARTLDVDPSNLHKLARRLGL  538
            +L+ AL  H G+WA AAR+L++DPSNL+KLARRL L
Sbjct  508  LLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  439 bits (1654),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 296/520 (57%), Positives = 390/520 (75%), Gaps = 21/520 (4%)

Query  9    LIADLAVDLPAAVRLQRLANRLRAHFSCGAVALLRLEGEHLRPVAVDGLTSDALGRRFET  68
            L+ADL+ DLPAAVRLQRL   LR +F+C+AV LLRL+G++L+  A  GL  + LGR F+ 
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  69   GNHPRLATILQRQGVTFFNHDSSLPDPYDGLIAGREDQPLPVHDCMGMALNVEAERWGVI  128
              HPRLA IL+      F  DS LPDPYDGL+ +    PLPVHDCMGM+L V++  WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  129  TLDALKVGTFSIKaraelaelaslveaSIRVTRLEDDIRALGVARAAQTIPSAVRDDHRI  188
            TLDAL+ G+F       L E A+L+E+++R+ +LE+++R+L +AR++  + +AV  ++ I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSG-LVEPAVESQNSI  223

Query  189  VGQSEAITRLLHELEVVADSELPVLLLGETGVGKELFahrlhrlsrraaQPLVHVNCAAL  248
            +G+S  +  LL EL +VAD+ELPVLL GETGVGKELFAH+LH  S RA QP+VHVNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  249  PESLAESELFGHVKGAFSGALSERPGRFEAAEGGTLFLDEVGELPLSVQAKLLRALQNGE  308
            PE+LAESELFGHV+GAFSGA  +R GRFE+A GGTLFLDE+GELPL++QAKLLRALQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  309  IQRLGADKPRQVNVRIIAATNRSLRDHVRDGTFRADLYHRLSVYPIPIPPLRERKGDVLL  368
            IQRLGAD+P++VNVRIIAATNR+L ++VR G FRADLYHRLSVYP+ IPPLRER  DVL+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  369  LAGRFLEENrarlglrslrlsaaaEGMLLRYGWPGNVRELEHVVSRAALKAVSRGAERRE  428
            LAG+FLE NR RLGLR LRL+A AE  +L Y+WPGNVRELEHV+SRAALK +S++  R+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  429  IVTLEPDVLDLDagdgasagevgggyvggaygdrgrTENAHAGIAPFALAGLSLRDVVEM  488
            ++++E+  L+L+                 +    +    A AG +P+     SL+  V+ 
Sbjct  464  LLSIEAAGLGLE---------------VTTHPAPASVPAAIAGETPY-----SLQAAVDS  503

Query  489  SQRQAIRQALVAAEGNWAAAARQLDLDASNLHKLARRLGV  528
             QRQ +++AL   +G+WA+AAR L++D+SNL+KLARRL +
Sbjct  504  YQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  436 bits (1642),  Expect = 1e-123, Method: Compositional matrix adjust.
 Identities = 302/512 (59%), Positives = 391/512 (77%), Gaps = 19/512 (3%)

Query  23   AELPQAVRLQRLVDLLRTQFGCGavallrleeerlrpvavTGLVSDALGRRFAVGQHPRL  82
            ++LP AVRLQRLV  LR +F C+AV LLRL+ +RL+  A  GL  + LGR F V +HPRL
Sbjct  51   SDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRL  110

Query  83   AAILTRREVTCFEHDSQLPDPYDGLLDTLVGEPLPVHDCMGVALHVEGRPWGVLTLDALA  142
            A IL   E   F  DS+LPDPYDGLL+   + PLPVHDCMG++L+V+GR WG +TLDAL 
Sbjct  111  ARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALR  170

Query  143  TGTFGPAARQRLGQWVPLVEAVVRVARLEQELRTLRMAATGPAEGDLALATPERGGAGEL  202
             G+F+++  +RL +  PL+E+ +R+++LE+E+R LR+A +G  E  +          ++ 
Sbjct  171  PGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE---------SQN  221

Query  203  EIVGESPALKRLLHELSVVAASELPVLLLGETGVGKELFARLLHHQSPRRARPLVHVNCA  262
             I+G+SP L+ LL EL +VA +ELPVLL GETGVGKELFA+ LH +SPR  +P+VHVNCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  263  ALPESLAESELFGHVRGAFSGAVSDRAGRFEAAEGGTLFLDEVGELPLSVQAKLLRTLQN  322
            ALPE+LAESELFGHVRGAFSGA  DR GRFE+A GGTLFLDE+GELPL++QAKLLR+LQ+
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  323  GEIQRLGADRPRSVHVRVIAATNRNLREQVASGAFRADLYHRLSVYPVPIPPLRERGNDV  382
            GEIQRLGADRP+ V+VR+IAATNR L E+V  G FRADLYHRLSVYPV IPPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  383  LVLAGRFLElnrarlglrslrlSPDAQAALRRYRWPGNVRELEHVISRAALKALSRGVDR  442
            L+LAG+FLELNR RLGLR LRL++DA+ ++  Y WPGNVRELEHVISRAALK LS++  R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  443  NEIVTleaglldldaldePVATPRSDapmapaaggalslaaptgtlRDAVDACQRQVLNA  502
            + ++++EA+ L+L+   +P +++            A   +    +L+ AVD+ QRQ+L+ 
Sbjct  462  HALLSIEAAGLGLEVTTHPAPAS----------VPAAIAGETPYSLQAAVDSYQRQLLQD  511

Query  503  ALVAHGGNWAQAARTLDVDPSNLHKLARRLGL  534
            AL  H G+WA AAR+L++DPSNL+KLARRL L
Sbjct  512  ALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  431 bits (1623),  Expect = 4e-122, Method: Compositional matrix adjust.
 Identities = 269/512 (53%), Positives = 378/512 (74%), Gaps = 15/512 (2%)

Query  9    LIPLVSDLSRELPDEERYRRLLCSLRHWLPCDATALLRLEGDVLIPLAVDGLSPDALGRR  68
            L  L++DL+ +LP   R +RL+ SLR+ + C A  LLRL+GD L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  69   FRVSEHPRFEALLASDGPLRFAADCDLPDPYDGLVDGHGA--LEVHDCLGCVLSVQGRPW  126
            F+V  HPR+  +L  + P+RFAAD +LPDPYDGL+++  A  L VHDC+G  L VQGR W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  127  GLITLDSLDPSSFGSVDLDNLQAFASLAAATVMAGERINQLARGFEDQRQLAEVYKRAAG  186
            G +TLD+L P+SF++     L+  A+L  +++    RI QL     + R LA      ++
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETAL----RIGQLENEVRGLR-LARSGLVEPA  216

Query  187  GRAPRELIGQSAVHQRMQQEIELVGNSPLTVLVMGETGVGKELVAESIHLHSPRAHKPLI  246
              +   ++G+S+V + + +E+ +V+++ L VL+ GETGVGKEL A+ +H +SPRA++P++
Sbjct  217  VESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  247  SLNCAALPEMLVESELFGHVKGAFSGAVNGRSGRFELADGGTLFLDEVGELPLSVQSKLL  306
             +NCAALPE L ESELFGHV+GAFSGA ++R GRFE A GGTLFLDE+GELPL++Q+KLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  307  RVLQSGQLQRVGADQEHHVDVRIIAATNRDLAEEVRSGRFRADLYHRLSVYPLLVPALRE  366
            R LQSG++QR+GAD+  HV+VRIIAATNR L EEVR GRFRADLYHRLSVYP+ +P+LRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  367  RGRDVLLLAGYFLEENRVRMGLRGLRLSAEAQRLLLAHPWPGNVRELEHLISRAVLKALS  426
            RG+DVL+LAG FLE NRVR+GLR LRL+A+A+R +LA +WPGNVRELEH+ISRA LK LS
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  427  AHPQKPRILTVEGPALGLDGSASATPLPTAEKALSAAVQGA---GLKASVDAFQRSLIVD  483
                +  +L++E+++LGL+ ++ ++P      +++AA+ G    +L+A+VD++QR L+ D
Sbjct  457  QAESRHALLSIEAAGLGLEVTTHPAP-----ASVPAAIAGETPYSLQAAVDSYQRQLLQD  511

Query  484  CLERHQGRWAEVARDLAVDRANLNRLAKRLGI  515
             L+RH+G+WA  AR L +D +NL +LA+RL +
Sbjct  512  ALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  429 bits (1614),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 310/523 (60%), Positives = 399/523 (77%), Gaps = 18/523 (3%)

Query  9    ATVLVDLCADLGTELPQAVRLQRLVDVLRAQFGCGAVAllrleeerlrPMAVAGLVSDTL  68
            ++ L  L ADL ++LP AVRLQRLV  LR +F C+AV LLRL+ +RL+  A  GL  + L
Sbjct  39   TSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVL  98

Query  69   GRRFVVGQHPRLAAILARHEVTCFEHDSTLPDPYDGLLDTLVGEPLPVHDCMGVGLHVEG  128
            GR F V +HPRLA IL   E   F  DS LPDPYDGLL+   + PLPVHDCMG+ L+V+G
Sbjct  99   GRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQG  158

Query  129  RPWGVltldalatgtfgaaarrrlaQSVPLVEAVVRVARLEQELRTLRMAASGPGEGGAA  188
            R WG +TLDAL  G+F+A+  RRL +  PL+E+ +R+++LE+E+R LR+A SG  E +  
Sbjct  159  RLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE  218

Query  189  LASSERGGVGELEIVGESPALKRLLHELGIVAASELPVLLLGETGVGKELFARLLHHQSP  248
                     ++  I+G+SP L+ LL EL IVA +ELPVLL GETGVGKELFA+ LH +SP
Sbjct  219  ---------SQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSP  269

Query  249  RHDRPLVHVNCAALPESLAESELFGHVRGAFSGAVSDRPGRFEAAEGGTLFLDEVGELPL  308
            R  +P+VHVNCAALPE+LAESELFGHVRGAFSGA  DR GRFE+A GGTLFLDE+GELPL
Sbjct  270  RARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPL  329

Query  309  SVQAKLLRTLQNGEIQRLGADRPRSVNVRVIAATNRNLREQVASGAFRADLYHRLSVYPV  368
            ++QAKLLR+LQ+GEIQRLGADRP+ VNVR+IAATNR L E+V  G FRADLYHRLSVYPV
Sbjct  330  AIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPV  389

Query  369  PIPPLRERGNDVLLLAGRFLDFNrarlglrslrlsPDAQAALRRYRWPGNVRELEHVISR  428
             IPPLRERG+DVL+LAG+FL++NR RLGLR LRL++DA+ ++  Y WPGNVRELEHVISR
Sbjct  390  HIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISR  449

Query  429  AALKALSRGADRNSIVTLEEglldldaldvpaadgpaapaapgpaagaapaapaGTLRDT  488
            AALK LS++  R++++++E + L+L+    PA+ + +A+ A   +          +L+ +
Sbjct  450  AALKVLSQAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY---------SLQAA  500

Query  489  VDACQRQAIIAALDRHQGNWAQAARALDVDSSNLHKLARRLGL  531
            VD+ QRQ +  AL+RH+G+WA AARAL++D+SNL+KLARRL L
Sbjct  501  VDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  429 bits (1614),  Expect = 2e-121, Method: Compositional matrix adjust.
 Identities = 252/506 (50%), Positives = 371/506 (74%), Gaps = 9/506 (1%)

Query  13   LVSDLSRELPEGERYRRLLEAMRALLPCDAAALLRLDGEWLVPLAVDGLSTDTLGRRFKV  72
            L++DL+ +LP + R +RL+ ++R  + C A  LLRLDG++L   A  GL  + LGR F+V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  73   SEHPRFEVLLAGEGPTRFAADSDLPDPYDGLV-DGLDDHLEVHDCLGCPLFVDEKLWGLI  131
              HPR+  +L    P RFAADS+LPDPYDGL+ D+    L VHDC+G  L V+ +LWG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  132  TLDALDPERFEPIELDALQAFASLASATVNAAERIERLATRAEDEHQRAEVYRQASGQQN  191
            TLDAL P  F++     L+  A+L    +++A RI +L     + +       +++ + +
Sbjct  165  TLDALRPGSFDASVARRLRECAPL----IETALRIGQLENEVRGLRLARSGLVEPAVESQ  220

Query  192  REMIGQSKAHKRLVEEINLVGGSDLTVLITGETGVGKELVAQAIHAASKRADKPIISLNC  251
              ++G+S   + L+ E+++V++++L VL+ GETGVGKEL A+ +HA S RA +P++ +NC
Sbjct  221  NSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNC  280

Query  252  AALPDTLVESELFGHVRGAFTGATSDRRGKFELANGGTLFLDEVGELSLTVQAKLLRVLQ  311
            AALP+TL ESELFGHVRGAF+GAT DR+G+FE A+GGTLFLDE+GEL+L++QAKLLR LQ
Sbjct  281  AALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQ  340

Query  312  SGQLQRLGSDKEHQVDVRLIAATNRDLAEEVRSGRYRADFYHRLSVYPLRVPALRDRGRD  371
            SG++QRLG+D+  +V+VR+IAATNR L EEVR GR+RAD+YHRLSVYP+++P+LR+RG+D
Sbjct  341  SGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHD  400

Query  372  VLLLSGYFLEQNRSRMGLNSLRLNSDAQEALLTYTWPGNVRELEHLIGRSALKALGNCKV  431
            VL+L+G FLE NR R+GL  LRL +DA+ ++L+Y+WPGNVRELEH+I+R+ALK L++   
Sbjct  401  VLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAES  460

Query  432  RPKILSLSAMDLDLPREVVDNSPMPSEATAALPLISG-DLRTATEQYQRQLISAALERNQ  490
            R  +LS+ A +L+L    V   P P+   AA++  +   L++A + YQRQL+  AL+R++
Sbjct  461  RHALLSIEAAGLGLE---VTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHN  517

Query  491  DNWASAARELGLDRANLGRMAKRLGM  516
            ++WA+AAR L +D +NL ++A+RL +
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  427 bits (1608),  Expect = 6e-121, Method: Compositional matrix adjust.
 Identities = 253/503 (51%), Positives = 371/503 (74%), Gaps = 6/503 (1%)

Query  14   VSDLSRELPEGERYRRLLEAMRALLPCDAAALLRLDGEWLVPLAVDGLSTDTLGRRFKVS  73
            ++DL+ +LP + R +RL+ ++R  + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFAALLGSPGPTRFAADSDLPDPYDGLV-DGLDDHLEVHDCMGCPLFIDERPWGLLT  132
             HPR+A +L    P RFAADS+LPDPYDGL+ D+    L VHDCMG  L ++ R WG +T
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALDPERFEPIEldalqafaslaaaTVNAAERIERLNNRVEDEHQRAEVYRQASGQQNR  192
            LDAL P  F++    ++       A+ +++A RI +L+N V + +       +++ + + 
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  193  EMIGQSKTHKRLVEEINLVGGSDLTVLITGETGVGKELVAQAIHAASPRADKPIISLNCA  252
             ++G+S   + L+ E+++V++++L VL+ GETGVGKEL A+ +HA SPRA +P++ +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  253  ALPDTLVESELFGHVRGAFTGAMNDRRGKFELANGGTLFLDEVGELSLTVQAKLLRVLQS  312
            ALP+TL ESELFGHVRGAF+GA +DR+G+FE A+GGTLFLDE+GEL+L++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  313  GQLQRLGSDQEHQVDVRLIAATNRDLAEEVRSGRYRADFYHRLSVYPLLVPALRDRGRDV  372
            G++QRLG+D+  +V+VR+IAATNR L EEVR GR+RAD+YHRLSVYP+ +P+LR+RG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  373  LLLSGYFLEQNRSRMGLNSLRLNSDAQTALLAYDWPGNVRELEHLIGRSALKALGNCKER  432
            L+L+G FLE NR R+GL  LRL +DA+ ++LAY WPGNVRELEH+I+R+ALK L++   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  433  PKILSLSAADLDLPNASVETAAEQPVATVTQAPTGDLREATERYQRQMIGACLERHNNNW  492
              +LS+ AA+L+L  ++  ++A  P A   ++P + L+ A + YQRQ++   L+RHN +W
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYS-LQAAVDSYQRQLLQDALQRHNGKW  520

Query  493  ASAARELGLDRANLGRMAKRLGM  515
            A+AAR L +D +NL ++A+RL +
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  427 bits (1606),  Expect = 8e-121, Method: Compositional matrix adjust.
 Identities = 308/527 (59%), Positives = 398/527 (76%), Gaps = 22/527 (4%)

Query  9    ATVLVDLCADLGTELPQAVRLQRLVDVLRAQFGCGAVAllrleeerlrPMAVAGLVSDTL  68
            ++ L  L ADL ++LP AVRLQRLV  LR +F C+AV LLRL+ +RL+  A  GL  + L
Sbjct  39   TSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVL  98

Query  69   GRRFVVGQHPRLAAILARHEVTCFEHDSTLPDPYDGLLDTLVGEPLPVHDCMGVGLHVEG  128
            GR F V +HPRLA IL   E   F  DS LPDPYDGLL+   + PLPVHDCMG+ L+V+G
Sbjct  99   GRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQG  158

Query  129  RPWGVltldalatgtfgaaarrrlaQSVPLVEAVVRVARLEQELRTLRMAASGPGEGGAA  188
            R WG +TLDAL  G+F+A+  RRL +  PL+E+ +R+++LE+E+R LR+A SG  E +  
Sbjct  159  RLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE  218

Query  189  LASSERGGVGELEIVGESPALKRLLHELGIVAASELPVLLLGETGVGKELFARLLHHQSP  248
                     ++  I+G+SP L+ LL EL IVA +ELPVLL GETGVGKELFA+ LH +SP
Sbjct  219  ---------SQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSP  269

Query  249  RHDRPLVHVNCAALPESLAESELFGHVRGAFSGAVSDRPGRFEAAEGGTLFLDEVGELPL  308
            R  +P+VHVNCAALPE+LAESELFGHVRGAFSGA  DR GRFE+A GGTLFLDE+GELPL
Sbjct  270  RARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPL  329

Query  309  SVQAKLLRTLQNGEIQRLGADRPRSVNVRVIAATNRNLREQVASGAFRADLYHRLSVYPV  368
            ++QAKLLR+LQ+GEIQRLGADRP+ VNVR+IAATNR L E+V  G FRADLYHRLSVYPV
Sbjct  330  AIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPV  389

Query  369  PIPPLRERGNDVLLLAGRFLDFNrarlglrslrlsPDAQAALRRYRWPGNVRELEHVISR  428
             IPPLRERG+DVL+LAG+FL++NR RLGLR LRL++DA+ ++  Y WPGNVRELEHVISR
Sbjct  390  HIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISR  449

Query  429  AALKALSRGADRNSIVTLEEglldldaldvpaadgpaapaapgpaagaaagaalaapagT  488
            AALK LS++  R++++++E               G +   +  PA+++ ++A  +  + +
Sbjct  450  AALKVLSQAESRHALLSIEA-------------AGLGLEVTTHPAPASVPAAIAGETPYS  496

Query  489  LRDTVDACQRQAIIAALDRHQGNWAQAARALDVDSSNLHKLARRLGL  535
            L+ +VD+ QRQ +  AL+RH+G+WA AARAL++D+SNL+KLARRL L
Sbjct  497  LQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  424 bits (1595),  Expect = 6e-120, Method: Compositional matrix adjust.
 Identities = 291/505 (58%), Positives = 388/505 (77%), Gaps = 6/505 (1%)

Query  6    LLADLCADFPQAVRLQRLVGCLRSHFHCGAVAILRLEEDHLRPIAVDGLVRDALGRRFSV  65
            LLADL +D+P AVRLQRLV+ LR +F+C+AV +LRL+ D+L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  66   GLHPRLAAILARRGVTCFHHDSALPDPYDGLIDEHVGEPLPVHDCMGISLQSEGKPWGVV  125
              HPRLA IL       F  DS LPDPYDGL+++  + PLPVHDCMG++L+ +G+ WG V
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  126  TLDALEVGTFTASAQEELGQLTALIEASIRTSRLEGEIRALRMGRAVGAAGETVRDDgev  185
            TLDAL  G+F AS    L + ++LIE+++R ++LE E+R+LR++R+ G    +V  +  +
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARS-GLVEPAVESQNSI  223

Query  186  igeiigeSEAIAQLMHEIGVVADSELPVLLLGETGVGKELFAhrlhrlsrrrdrplihVN  245
            +G+    S  +  L+ E+ +VAD+ELPVLL GETGVGKELFAH+LH  S R  +P++HVN
Sbjct  224  LGD----SPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVN  279

Query  246  CAALPESLAESELFGHVRGAFTGATGERPGRFEAADGGTLFLDEVGELPLAIQAKLLRTL  305
            CAALPE+LAESELFGHVRGAF+GAT +R GRFE+A GGTLFLDE+GELPLAIQAKLLR+L
Sbjct  280  CAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRAL  339

Query  306  QNGEIQRLGSDRPRRVDVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPLRERGN  365
            Q+GEIQRLG+DRP++V+VR+IAATNR L E+VR G FRADLYHRLSVYP+ IPPLRERG+
Sbjct  340  QSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGH  399

Query  366  DVLLLAGRFLElnrarlglrslrlSVAAQDALRRYTWPGNVRELEHVISRAALKLLSRGA  425
            DVL+LAG+FLELNR RLGLR LRL+  A+ ++  Y+WPGNVRELEHVISRAALK+LS++ 
Sbjct  400  DVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAE  459

Query  426  SRKdiitldtdlldldgvvapadaaadaapFMSAPATSLREAVEACQSRCIEQALEAQSG  485
            SR   +           V + + +A+ +A++ +  + SL+ AV++ Q + +++AL+ ++G
Sbjct  460  SRH-ALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNG  518

Query  486  NWAQAARQLGMDASNLHKLARRLGV  510
            +WA AAR L MD+SNL+KLARRL +
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  423 bits (1591),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 292/491 (60%), Positives = 391/491 (80%), Gaps = 5/491 (1%)

Query  19   RMQRLVGSLRSHFRCGAVALLRLEEDHLRPIAVDGLVRDALGRRFVVGQHPRLAAILARR  78
            R+QRLV+SLR +F C+AV LLRL+ D+L+  A  GL  + LGR F V +HPRLA IL   
Sbjct  58   RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEG  117

Query  79   GVTCFHHDSTLPDPYDGLIDEQAGAPLPVHDCMGVSLHVEGQLWGALTLDTLKIGTFDAD  138
                F  DS LPDPYDGL+++ +++PLPVHDCMG++L+V+G+LWGA+TLD+L+ G+FDA 
Sbjct  118  EPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDAS  177

Query  139  AQAELRQLAVVieaaarttrleaeiraLRATRgdlppgdpaaddWEIIGQSPAIHQLLHE  198
                LR+ A +IE+A R  +LE E+R+LR +R++L      +++  I+G+SP ++ LL E
Sbjct  178  VARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN-SILGDSPVLRGLLKE  236

Query  199  LEVVADSELPVLLLGETGVGKELFAhrlhrlsrrrdrplvhVNCAALPESLAESELFGHV  258
            L +VAD+ELPVLL GETGVGKELFAH+LH  S R  +P+VHVNCAALPE+LAESELFGHV
Sbjct  237  LKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHV  296

Query  259  KGAFSGAVGERPGRFEAADGGTLFLDEVGELPLPVQAKLLRALQNGEIQRLGADHPRHVD  318
            +GAFSGA  +R GRFE+A GGTLFLDE+GELPL++QAKLLRALQ+GEIQRLGAD+P+HV+
Sbjct  297  RGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVN  356

Query  319  ARVIAATNRNLRERVRDGAFRADLYHRLSVYPVPIPPLRERGNDVLLLAGRFLESNrarl  378
             R+IAATNR L E VR G FRADLYHRLSVYPV IPPLRERG+DVL+LAG+FLE NR RL
Sbjct  357  VRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRL  416

Query  379  glrslrlspgaEEALRRYPWPGNVRELEHVVSRAALKMLSRGASRDDIVTLETGLLDLDA  438
            GLR LRL+++AE ++  Y+WPGNVRELEHV+SRAALK+LS++ SR+ ++++E++ L+L+ 
Sbjct  417  GLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGLE-  475

Query  439  QAVAPPSPAGLPPEASPDIAPGITLRDAVADCQRRHIQAALAIHQDNWAQTARTLGLDAS  498
               + P+PA++P+  + + +   +L+ AV   QR+ +Q AL  H+++WA +AR+L +D+S
Sbjct  476  -VTTHPAPASVPAAIAGETP--YSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPS  532

Query  499  NLHKLARRLGL  509
            NL+KLARRL L
Sbjct  533  NLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  423 bits (1591),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 292/491 (60%), Positives = 391/491 (80%), Gaps = 5/491 (1%)

Query  19   RMQRLVGSLRSHFRCGAVALLRLEEDHLRPIAVDGLVRDALGRRFVVGQHPRLAAILARR  78
            R+QRLV+SLR +F C+AV LLRL+ D+L+  A  GL  + LGR F V +HPRLA IL   
Sbjct  58   RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEG  117

Query  79   GVTCFHHDSTLPDPYDGLIDEQAGAPLPVHDCMGVSLHVEGQLWGALTLDTLKIGTFDAD  138
                F  DS LPDPYDGL+++ +++PLPVHDCMG++L+V+G+LWGA+TLD+L+ G+FDA 
Sbjct  118  EPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDAS  177

Query  139  AQAELRQLAVVieaaarttrleaeiraLRATRgdlppgdpaaddWEIIGQSPAIHQLLHE  198
                LR+ A +IE+A R  +LE E+R+LR +R++L      +++  I+G+SP ++ LL E
Sbjct  178  VARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN-SILGDSPVLRGLLKE  236

Query  199  LEVVADSELPVLLLGETGVGKELFAhrlhrlsrrrdrplvhVNCAALPESLAESELFGHV  258
            L +VAD+ELPVLL GETGVGKELFAH+LH  S R  +P+VHVNCAALPE+LAESELFGHV
Sbjct  237  LKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHV  296

Query  259  KGAFSGAVGERPGRFEAADGGTLFLDEVGELPLPVQAKLLRALQNGEIQRLGADHPRHVD  318
            +GAFSGA  +R GRFE+A GGTLFLDE+GELPL++QAKLLRALQ+GEIQRLGAD+P+HV+
Sbjct  297  RGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVN  356

Query  319  ARVIAATNRNLRERVRDGAFRADLYHRLSVYPVPIPPLRERGNDVLLLAGRFLESNrarl  378
             R+IAATNR L E VR G FRADLYHRLSVYPV IPPLRERG+DVL+LAG+FLE NR RL
Sbjct  357  VRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRL  416

Query  379  glrslrlspgaEEALRRYPWPGNVRELEHVVSRAALKMLSRGASRDDIVTLETGLLDLDA  438
            GLR LRL+++AE ++  Y+WPGNVRELEHV+SRAALK+LS++ SR+ ++++E++ L+L+ 
Sbjct  417  GLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGLE-  475

Query  439  QAVAPPSPAGLPPEASPDIAPGITLRDAVADCQRRHIQAALAIHQDNWAQTARTLGLDAS  498
               + P+PA++P+  + + +   +L+ AV   QR+ +Q AL  H+++WA +AR+L +D+S
Sbjct  476  -VTTHPAPASVPAAIAGETP--YSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPS  532

Query  499  NLHKLARRLGL  509
            NL+KLARRL L
Sbjct  533  NLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  423 bits (1592),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 256/491 (53%), Positives = 361/491 (74%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLQALRDLLPCDATALLRLDGEYLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLEALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRL  +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVANSDLSVLITGETGVGKELVAQSIHRHSMRSGKPMIS  248
            E    ++G+S+  ++LL E+++VA+++L+VL+ GETGVGKEL A+ +H +S R+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RA+LK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERSRIVTLHRQDLDLPAETPAPPRSVVEPAPAAPTTGHSLRAATDAYQRHLIQDCLAR  488
               R  +++++  +L+L   T ++P SV  PA+ A  T  SL+AA D+YQR+L+QD L R
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASV--PAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGSWASAARE  499
            H+G WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  423 bits (1592),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 256/491 (53%), Positives = 361/491 (74%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLQALRDLLPCDATALLRLDGEYLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLEALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRL  +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVANSDLSVLITGETGVGKELVAQSIHRHSMRSGKPMIS  248
            E    ++G+S+  ++LL E+++VA+++L+VL+ GETGVGKEL A+ +H +S R+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RA+LK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERSRIVTLHRQDLDLPAETPAPPRSVVEPAPAAPTTGHSLRAATDAYQRHLIQDCLAR  488
               R  +++++  +L+L   T ++P SV  PA+ A  T  SL+AA D+YQR+L+QD L R
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASV--PAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGSWASAARE  499
            H+G WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  423 bits (1592),  Expect = 1e-119, Method: Compositional matrix adjust.
 Identities = 256/491 (53%), Positives = 361/491 (74%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLQALRDLLPCDATALLRLDGEYLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLEALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRL  +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVANSDLSVLITGETGVGKELVAQSIHRHSMRSGKPMIS  248
            E    ++G+S+  ++LL E+++VA+++L+VL+ GETGVGKEL A+ +H +S R+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RA+LK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERSRIVTLHRQDLDLPAETPAPPRSVVEPAPAAPTTGHSLRAATDAYQRHLIQDCLAR  488
               R  +++++  +L+L   T ++P SV  PA+ A  T  SL+AA D+YQR+L+QD L R
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASV--PAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGSWASAARE  499
            H+G WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  422 bits (1589),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 256/491 (53%), Positives = 361/491 (74%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLQALRDLLPCDATALLRLDGEYLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLEALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRL  +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVANSDLSVLITGETGVGKELVAQSIHRHSMRSGKPMIS  248
            E    ++G+S+  ++LL E+++VA+++L+VL+ GETGVGKEL A+ +H +S R+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RA+LK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERSRIVTLHRQDLDLPAETPAPPRSVVEPAPAAPTTGHSLRAATDAYQRRLIQDCLAR  488
               R  +++++  +L+L   T ++P SV  PA+ A  T  SL+AA D+YQR+L+QD L R
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASV--PAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGSWASAARE  499
            H+G WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  422 bits (1588),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 256/491 (53%), Positives = 360/491 (74%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLQALRDLLPCDATALLRLDGEYLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLEALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRL  +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVANSDLSVLITGETGVGKELVAQSIHRHSMRSGKPMIS  248
            E    ++G+S+  ++LL E+++VA+++L+VL+ GETGVGKEL A+ +H +S R+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RA+LK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERSRIVTLHRQDLDLPAETPTPPRSVVEPAPAAPTTGHSLRAATDAYQRRLIQDCLAR  488
               R  +++++  +L+L   T  +P SV  PA+ A  T  SL+AA D+YQR+L+QD L R
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASV--PAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGSWASAARE  499
            H+G WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  422 bits (1589),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 256/491 (53%), Positives = 361/491 (74%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLQALRDLLPCDATALLRLDGEYLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLEALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRL  +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVANSDLSVLITGETGVGKELVAQSIHRHSMRSGKPMIS  248
            E    ++G+S+  ++LL E+++VA+++L+VL+ GETGVGKEL A+ +H +S R+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RA+LK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERSRIVTLHRQDLDLPAETPAPPRSVVEPAPAAPTTGHSLRAATDAYQRRLIQDCLAR  488
               R  +++++  +L+L   T ++P SV  PA+ A  T  SL+AA D+YQR+L+QD L R
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASV--PAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGSWASAARE  499
            H+G WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  422 bits (1588),  Expect = 2e-119, Method: Compositional matrix adjust.
 Identities = 255/491 (52%), Positives = 361/491 (74%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLQALRDLLPCDATALLRLDGEYLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLEALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRL  +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVGNSDLSVLITGETGVGKELVAQSIHRHSMRSGKPMIS  248
            E    ++G+S+  ++LL E+++V++++L+VL+ GETGVGKEL A+ +H +S R+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RA+LK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERSRIVTLHRQDLDLPAETPASPRSVVEPAPAAPTTGHSLRAATDAYQRRLIQDCLAR  488
               R  +++++  +L+L   T ++P SV  PA+ A  T  SL+AA D+YQR+L+QD L R
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASV--PAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGSWASAARE  499
            H+G WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  422 bits (1588),  Expect = 3e-119, Method: Compositional matrix adjust.
 Identities = 303/519 (59%), Positives = 398/519 (77%), Gaps = 20/519 (3%)

Query  6    LLADLSTDLPQAVRLQRLVDHLRARFHCGAVALLQLEQDHLRPVAVDGLVREALGRRFAV  65
            LLADL++DLP AVRLQRLV  LR  F+C+AV LL+L+ D+L+  A  GL  E LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  66   GQHPRLAAILARREVTCFDHDSTLSDPYDGLLDTLVGEPLPVHDCMGVSLQVDGQPWGVL  125
             +HPRLA IL   E   F  DS L+DPYDGLL+   + PLPVHDCMG++L+V+G+ WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  126  TLDALQTGTFGEVARAALADCKVLVEAAVRISRLEREVQALRSAPHSRGADDERPTRAGE  185
            TLDAL+ G+F+      L +C  L+E+A+RI++LE EV++LR A   R++  E +    E
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLA---RSGLVEPAV---E  218

Query  186  GDMEIVGQSEPLLRLLHELEVVAGSDLPVLLLGETGVGKELFARLLHRQSPRAARPLVHV  245
            ++  I+G+S  L  LL EL +VA+++LPVLL GETGVGKELFA+ LH +SPRA +P+VHV
Sbjct  219  SQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHV  278

Query  246  NCAALPESLAESELFGHVRGAFSGAVTDRPGRFEAAEGGTLFLDEVGELPLAVQAKLLRT  305
            NCAALPE+LAESELFGHVRGAFSGA  DR GRFE+A GGTLFLDE+GELPLA+QAKLLR+
Sbjct  279  NCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRA  338

Query  306  LQNGEIQRLGadrprrvdvrvvaaTNRNLREQVAAGDFRADLYHRLSVYPVPIPPLRERG  365
            LQ+GEIQRLGADRP++V+VR++AATNR L E+V  G FRADLYHRLSVYPV IPPLRERG
Sbjct  339  LQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERG  398

Query  366  NDVLLIAGRFLElnrarlglrslrlsasaqealrrYPWPGNIRELEHVISRAALKALSRG  425
            +DVL++AG+FLELNR RLGLR LRL+A A+ ++  Y+WPGN+RELEHVISRAALK LS++
Sbjct  399  HDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQA  458

Query  426  VSRTDIVTLEPVlldldahaasaapapldasapaqateppatasttdtagspLRDAVDAC  485
             SR  ++++E+                L+    ++++ ++  A+ ++ +  +L+ AVD+ 
Sbjct  459  ESRHALLSIEAA--------------GLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSY  504

Query  486  QRHAITQALARHQGNWAQAARALEVDASNLHKLARRLGL  524
            QR+ + +AL RH+G+WA AARALE+D+SNL+KLARRL L
Sbjct  505  QRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  418 bits (1573),  Expect = 4e-118, Method: Compositional matrix adjust.
 Identities = 287/509 (57%), Positives = 391/509 (77%), Gaps = 11/509 (2%)

Query  12   LLADLGADLPHAVRLQRLVSALRACFGCGAVALLRLEEEHLRPVAVDGLVRDALGRRFSV  71
            LLADL +DLP AVRLQRLV++LR  F C+AV LLRL+ ++L+  A  GL  + LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  72   GLHPRLGAILARRGVTCFHHDSVLPDPYDGLIDEHVGEPLPVHDCMGIRLELDGRAWGVL  131
              HPRL+ IL       F  DS LPDPYDGL+++  + PLPVHDCMG+ L ++GR WG +
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  132  TLDALQVGTFDEAAQAELDGLTLLVEAAIRTTQLEADIRALQLSRGKTPDNELPPDEGEI  191
            TLDAL+ G+FD +    L   + L+E+A+R  QLE ++R+L+L+R+   +  + ++++ I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS-I  223

Query  192  IGQSEAITGLLHELDVVADSELPVLLLGETGVGKELFAhrlhrlsrrrdrplvhVNCAAL  251
            +G+S  + GLL EL +VAD+ELPVLL GETGVGKELFAH+LH  S R  +P+VHVNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  252  PESLAESELFGHVKGAFSGATGERPGRFEAADGGTLFLDEVGELPLAIQAKLLRTLQNGE  311
            PE+LAESELFGHV+GAFSGAT +R GRFE+A GGTLFLDE+GELPLAIQAKLLR+LQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  312  IQRLGSDKPRRVDVRVIAATNRNLREHVRDGSFRADLYHRLSVYPIPIPPLRERDNDVLL  371
            IQRLG+D+P++V+VR+IAATNR L E+VR G FRADLYHRLSVYP+ IPPLRER++DVL+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  372  LAGRFLELNrarlgmrslrlsrsAQDALRRYRWPGNVRELEHVVSRAALRSVSRGANRND  431
            LAG+FLELNR RLG+R LRL+  A+ ++  Y WPGNVRELEHV+SRAAL+ +S++ +R+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  432  IVTleadlldldslaspsegpvapvasapsavhsRATLAAGVTLRDAVEQTQRDCIEHAL  491
            ++++EA  L+L+  + P+ ++V++  ++           +  +L+ AV+  QR+ +++AL
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIAG----------ETPYSLQAAVDSYQRQLLQDAL  513

Query  492  RLHGRNWAKAARELGIDASNLHKLAKRLG  520
            + H  +WA AAR L +D+SNL+KLA+RL 
Sbjct  514  QRHNGKWAGAARALEMDPSNLRKLARRLN  542

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  415 bits (1562),  Expect = 3e-117, Method: Compositional matrix adjust.
 Identities = 295/510 (58%), Positives = 396/510 (78%), Gaps = 11/510 (2%)

Query  5    ILADLLTDLPNAVRLQRAVHTLREHFECdavgllsldddslrlvaasGLAHEALGRRFVV  64
            +LADL +DLP AVRLQR V +LR++F+C AV LL LD+D L+  AA GL  E LGR F V
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  65   AQHPRFATILSRREPTWFEPGSMLAdpydgllddkkglplpVHDCLGMSLYTEGRPWGVV  124
             +HPR+A IL   EP +F ++S L+DPYDGLL+D  + PLPVHDC+GM+L  +GR WG V
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  125  TLDALAVGAFDDAALAELQHYSLILEAAIRVTALEKENRSLKLLGSSVNDAMQIVDESEI  184
            TLDAL  G+FD +    L++ + ++E+A+R+  LE+E R+L+L  S++ ++  +  ++ I
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEP-AVESQNSI  223

Query  185  LGASDAITQLLHELDVVADSDLPVLLTGETGVGKDLFArrlhrrsrrsQQPMVHVNCAAL  244
            LG S  +  LL EL +VAD++LPVLL GETGVGK+LFA++LH  S R++QPMVHVNCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  245  PESLAESELFGHVKGAFSGASSDRAGRFEAAQGGSLFLDEVGELPLSVQAKLLRALQNGE  304
            PE+LAESELFGHV+GAFSGA+ DR GRFE+A GG+LFLDE+GELPL++QAKLLRALQ+GE
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  305  IQRLGADQTIKTDVRIIAATNRQLKESTSAGNFRADLYHRLSVYPVHIPPLRERGRDVLI  364
            IQRLGAD+    +VRIIAATNR L E    G FRADLYHRLSVYPVHIPPLRERG+DVL+
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  365  LAGHFlelsrarlglrglrlsYAAERALLNYTWPGNVRELEHVVSRAALKTLSRGASRDQ  424
            LAGHFLEL+R RLGLR LRL+  AER++L Y+WPGNVRELEHV+SRAALK LS++ SR+ 
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  425  ILTLEPEVLDVDAAEPIHEPDSTAPDSASPVHIGSAAEQKAMPLRITMENSQRHAVQQAL  484
            +L++E+  L+++ +   H + ++ P        ++ A + + +L+ ++++ QR+ +Q+AL
Sbjct  464  LLSIEAAGLGLEVT--THPAPASVP--------AAIAGETPYSLQAAVDSYQRQLLQDAL  513

Query  485  AQTNNNWAQAARLLDIDSSNLHKLARKLGL  514
             + N +WA AAR L++D+SNL+KLAR+L L
Sbjct  514  QRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  414 bits (1560),  Expect = 4e-117, Method: Compositional matrix adjust.
 Identities = 278/503 (56%), Positives = 388/503 (78%), Gaps = 7/503 (1%)

Query  6    LFADLVTELPAAVRLQRLVTTLRSHFACGavallqlqhaqlKPIAVHGLLRETLGRRFDI  65
            L+ADL ++LPAAVRLQRLV++LR +F C+AV LL+L+  +L+  A  GL  E LGR F++
Sbjct  45   LLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQV  104

Query  66   SQHPRLAAILASRQPVRFPPGSDLPDPYDGLLAEQPGEALPVHDCLGMALYVDGQCWGAI  125
             +HPRLA IL   +PVRF+++S+LPDPYDGLL + P+ +LPVHDC+GM+L V+G+ WGA+
Sbjct  105  ERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAV  164

Query  126  TLDALSPSCFNalaisqiqqlslliEATIRLTELERINRALRQREPESVTNQLADGSGQF  185
            TLDAL P+ F+A    ++++ + LIE+++R+ +LE   R+LR   +  V   +    +Q 
Sbjct  165  TLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVE---SQN  221

Query  186  EIIGQSATLLRVLQELDVVAASDLPVLLLGETGVGKELFARRLHRMSTRCAKPMVYVNCA  245
             I+G+S+ L  +L+EL +VA ++LPVLL GETGVGKELFA++LH  S R  +PMV VNCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  246  ALPESLAESELFGHCKGAFSGALSERAGRFDAADGGTLFLDEVGELPLSVQAKLLRVLQN  305
            ALPE+LAESELFGH +GAFSGA  +R GRF++A GGTLFLDE+GELPL++QAKLLR LQ+
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  306  GEIQRLGSDHLRRVNVRLVAATNRDLQQQVKLGEFRADLYHRLSVYPIMVPPLRERTEDL  365
            GEIQRLG+D+ ++VNVR++AATNR L ++V+ G FRADLYHRLSVYP+ +PPLRER +D+
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  366  SLLAGHFLElnrsrlglrsirlssAAEIMLLHYGWPGNVRELEHVLSRAAIKALSLGAQR  425
             +LAGHFLELNR RLGLR +RL++ AE  +L Y+WPGNVRELEHV+SRAA+K LS +  R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  426  TDIVTLLPELLDLPSEMRQ---SLPDTSKQNKPVYNFKLATQQWQKQFIEQALAQHANCW  482
              ++++ +  L+L    +    S+P +   + P Y+++ A +  Q+Q++++AL +H   W
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETP-YSLQAAVDSYQRQLLQDALQRHNGKW  520

Query  483  AKAARALELDASNLHKLAQRLGI  505
            A AARALE+D+SNL+KLA+RL +
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  413 bits (1555),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 251/480 (53%), Positives = 358/480 (75%), Gaps = 10/480 (2%)

Query  40   CDATALLRLDGEWLVPLAVNGLSTDTLGRRFKVSEHPRFAALLSSPGPTRFASDSDLPDP  99
            C A  LLRLDG++L   A  GL  + LGR F+V  HPR+A +L    P RFA+DS+LPDP
Sbjct  72   CSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEGEPVRFAADSELPDP  131

Query  100  YDGLV-EGLDDHLEVHDCMGCPLFVDERPWGLLTLDALDPQRFEPIELDalqafaslaaa  158
            YDGL+ ++    L VHDCMG  L V+ R WG +TLDAL P  F++    ++       A+
Sbjct  132  YDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDA----SVARRLRECAP  187

Query  159  tvsaaqRIERLAQRAENEH-QRAEVYRQASGQNREMIGQSKAHKRLLEEIKLVGGSDLTV  217
             + +A RI +L +     +  R+ +   A   +  ++G+S   + LL E+K+V++++L V
Sbjct  188  LIETALRIGQLENEVRGLRLARSGLVEPAVESQNSILGDSPVLRGLLKELKIVADAELPV  247

Query  218  LITGETGVGKELVAQAIHAASPRAEQPIISLNCAALPDTLVESELFGHVRGAFTGATQDR  277
            L+ GETGVGKEL A+ +HA SPRA QP++ +NCAALP+TL ESELFGHVRGAF+GATQDR
Sbjct  248  LLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDR  307

Query  278  RGKFELANGGTLFLDEVGELSLTVQAKLLRVLQSGQLQRLGSDQEHRVDVRLIAATNRDL  337
            +G+FE A+GGTLFLDE+GEL+L++QAKLLR LQSG++QRLG+D+  +V+VR+IAATNR L
Sbjct  308  QGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTL  367

Query  338  AEEVRNGRYRADFYHRLSVYPLRVPALRERGRDVLLLSGYFLEQNRSRMGLGSLRLSVEA  397
             EEVR+GR+RAD+YHRLSVYP+++P+LRERG+DVL+L+G FLE NR R+GL  LRL+ +A
Sbjct  368  IEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADA  427

Query  398  QQALLAYHWPGNVRELEHLIGRSALKALGNHPERPKILSLDAGDLDLPRASERTSAPVEP  457
            ++++LAY WPGNVRELEH+I+R+ALK L++   R  +LS++A++L+L  +++ ++A+V +
Sbjct  428  ERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGLEVTTHPAPASVPA  487

Query  458  AVATQAMPAVAGDLRQATDHYQRQLISSCLERHQHNWASAARELGLDRANLSRLAKRLGL  517
            A+A ++    +  L+ A D YQRQL+   L+RH+ +WA+AAR L +D +NL +LA+RL L
Sbjct  488  AIAGET----PYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  413 bits (1555),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 259/521 (50%), Positives = 365/521 (71%), Gaps = 20/521 (3%)

Query  10   LVPLVDDLSREMPDGERYRRLLEAVRALLPCDATALLRLDGAALVPLAVNGLSSDTMGRR  69
            L  L+ DL+ ++P + R +RL+ ++R  + C A  LLRLDG  L   A  GL  + +GR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FKVEEHPRFKRLLEAGGPMRFPVDCELPDPYDGLVEGLHG-HLEVHDCMGCPVQVGEKNW  128
            F+VE HPR+ R+LE G P+RF+ D ELPDPYDGL+++  +  L VHDCMG  ++V  + W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GVLTIDALNSQRFSAVDLGDLQAFASLAAATVSVVQRMERLTLRAEDERLRADTYRELAA  188
            G +T+DAL +  F A     L+  A+L  +++    R+ +L     + RL      E A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETAL----RIGQLENEVRGLRLARSGLVEPAV  217

Query  189  ESTPPALIGQSAAHQRLLEEIAVVGNSELTVLITGETGVGKELVAQALHAASPRAARPLI  248
            ES   +++G+S+  + LL E+ +V+++EL VL+ GETGVGKEL A+ LHA SPRA +P++
Sbjct  218  ES-QNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  249  SLNCAALPETLVESELFGHVRGAFSGAVADRRGKFELANGGTLFLDEVGELSLAVQAKLL  308
             +NCAALPETL ESELFGHVRGAFSGA  DR+G+FE A+GGTLFLDE+GEL+LA+QAKLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  309  RVLQNGQLQRLGSDREHQVDVRVIAATNRDLAHEVRAGRYRADFYHRLSVYPLVVPPLRE  368
            R LQ+G++QRLG+DR  +V+VR+IAATNR L +EVR GR+RAD+YHRLSVYP+ +PPLRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  369  RGHDVLLLAGYFLEQNRSRLGLGSLRMDADAQASLLAHDWPGNVRELEHLVGRSALKALA  428
            RGHDVL+LAG FLE NR RLGL  LR+ ADA+ ++LA  WPGNVRELEH+++R+ALK L+
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  429  GVPGRPRILSLTASHLDLPAPASWGASAPDASGSKDAAVQEGMPDAGGAALPVDLRTSME  488
               +R  +LS+ A+ L+L   +               +   ++P A ++  P  L+++++
Sbjct  457  QAESRHALLSIEAAGLGLEVTTH--------------PAPASVPAAIAGETPYSLQAAVD  502

Query  489  WHQRQRIAASLARHHNNWASAARELGLHRANLVRLAKRLGL  529
              QRQ +  +L RH+ +WA+AAR L ++ +NL +LA+RL L
Sbjct  503  SYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  411 bits (1548),  Expect = 3e-116, Method: Compositional matrix adjust.
 Identities = 251/480 (53%), Positives = 357/480 (75%), Gaps = 10/480 (2%)

Query  40   CDATALLRLDGEWLVPLAVNGLSTDTLGRRFKVSEHPRFAALLSSPGPTRFASDSDLPDP  99
            C A  LLRLDG++L   A  GL  + LGR F+V  HPR+A +L    P RFA+DS+LPDP
Sbjct  72   CSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEGEPVRFAADSELPDP  131

Query  100  YDGLV-EGLDDHLEVHDCMGCPLFVDERPWGLLTLDALDPQRFEPIELDalqafaslaaa  158
            YDGL+ ++    L VHDCMG  L V+ R WG +TLDAL P  F++    ++       A+
Sbjct  132  YDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDA----SVARRLRECAP  187

Query  159  tvsaaqRIERLAQRAENEH-QRAEVYRQASGQNREMIGQSKAHKRLLEEIKLVGGSDLTV  217
             + +A RI +L +     +  R+ +   A   +  ++G+S   + LL E+K+V++++L V
Sbjct  188  LIETALRIGQLENEVRGLRLARSGLVEPAVESQNSILGDSPVLRGLLKELKIVADAELPV  247

Query  218  LITGETGVGKELVAQAIHAASPRAEQPIISLNCAALPDTLVESELFGHVRGAFTGATQDR  277
            L+ GETGVGKEL A+ +HA SPRA QP++ +NCAALP+TL ESELFGHVRGAF+GATQDR
Sbjct  248  LLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDR  307

Query  278  RGKFELANGGTLFLDEVGELSLTVQAKLLRVLQSGQLQRLGSDQEHRVDVRLIAATNRDL  337
            +G+FE A+GGTLFLDE+GEL+L++QAKLLR LQSG++QRLG+D+  +V+VR+IAATNR L
Sbjct  308  QGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTL  367

Query  338  AEEVRNGRYRADFYHRLSVYPLRVPALRERGRDVLLLSGYFLEQNRSRMGLGSLRLSVEA  397
             EEVR+GR+RAD+YHRLSVYP+++P+LRERG+DVL+L+G FLE NR R+GL  LRL+ +A
Sbjct  368  IEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADA  427

Query  398  QQALLAYHWPGNVRELEHLIGRSALKALGNHPERPKILSLDAGDLDLPRASERTSAPVEP  457
            ++++LAY WPGNVRELEH+I+R+ALK L++   R  +LS++A++L+L  +++ ++A+V +
Sbjct  428  ERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGLEVTTHPAPASVPA  487

Query  458  ASATQAMPAVAGDLRQATDHYQRQLISSCLERHQHNWASAARELGLDRANLSRLAKRLGL  517
            A A ++    +  L+ A D YQRQL+   L+RH+ +WA+AAR L +D +NL +LA+RL L
Sbjct  488  AIAGET----PYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  410 bits (1542),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 253/491 (52%), Positives = 359/491 (74%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLQALRDLLPCDATALLRLDGEYLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLEALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRL  +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVANSDLSVLITGETGVGKELVAQSIHRHSMRSGKPMIS  248
            E    ++G+S+  ++LL E+++VA+++L+VL+ GETGVGKEL A+ +H +S R+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRASLKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RA+LK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERSRIVTLHRQDLDLpaeppapprsvvepapsvpQTGHSLRAATDAYQRRLIQDCLAR  488
               R  +++++  +L+L  E  + P +   PA+   +T  SL+AA D+YQR+L+QD L R
Sbjct  458  AESRHALLSIEAAGLGL--EVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGSWASAARE  499
            H+G WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  409 bits (1540),  Expect = 1e-115, Method: Compositional matrix adjust.
 Identities = 267/507 (53%), Positives = 372/507 (74%), Gaps = 12/507 (2%)

Query  14   VSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQILLSRPEPTRFASDSELPDPYDGLV-NAPDADLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++P + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-HRAELYRQASGQDR  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ L   A   + 
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVSLNCA  251
             ++G+SP  + L+ E+++V+ ++L VL+ GETGVGKEL A+ LH  S+RA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ +A+ +++AY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRVSA-TTPGTLPSPAAPLQVVTPPEGGLREAVDSYQRQVIEACLQRH  490
              +L++EA +L+L V++  +P+++P++     +      +L+ AVDSYQRQ+++  LQRH
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAA-----IAGETPYSLQAAVDSYQRQLLQDALQRH  516

Query  491  QDNWAAAARELGLDRANLSRLARRLGL  517
            +++WA+AAR L +D +NL +LARRL L
Sbjct  517  NGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  409 bits (1539),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 267/507 (53%), Positives = 371/507 (74%), Gaps = 12/507 (2%)

Query  14   VSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQILLSRPEPTRFASDSELPDPYDGLV-NAPDADLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++P + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-HRAELYRQASGQDR  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ L   A   + 
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHQASNRADKPLVSLNCA  251
             ++G+SP  + L+ E+++V+ ++L VL+ GETGVGKEL A+ LH  S RA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ +A+ +++AY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRVSA-TTPGTLPSPAAPLQVVTPPEGGLREAVDSYQRQVIEACLQRH  490
              +L++EA +L+L V++  +P+++P++     +      +L+ AVDSYQRQ+++  LQRH
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAA-----IAGETPYSLQAAVDSYQRQLLQDALQRH  516

Query  491  QDNWAAAARELGLDRANLSRLARRLGL  517
            +++WA+AAR L +D +NL +LARRL L
Sbjct  517  NGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  409 bits (1540),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 249/488 (52%), Positives = 354/488 (73%), Gaps = 8/488 (1%)

Query  18   SRELPDSERYRRLLEALRQLLPCDATALLRLEGDQLVPLAVDGLSADTLGRRFKTSEHPR  77
            + +LP + R +RL+ +LR+ + C A  LLRL+GD+L   A  GL  + LGR F+   HPR
Sbjct  50   PSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPR  109

Query  78   LRALLEHPGPTHFAADCGLPDPYDGLVEGLHG-HLEVHDCLGCPLFLDEQPWGLLTLDAL  136
            L  +LE+  P +FAAD  LPDPYDGL+++  +  L VHDC+G  L ++ + WG +TLDAL
Sbjct  110  LARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDAL  169

Query  137  DPERFSTGDLDNLEAFASLAAATVKASQRMLDLTLRAEHEQQRADAYQRASGDQPRELIG  196
             P  F ++    L   A+L  ++++ +Q  L+  +R+ +  +   +   ++ +    ++G
Sbjct  170  RPGSFDASVARRLRECAPLIETALRIGQ--LENEVRGLRLAR--SGLVEPAVESQNSILG  225

Query  197  QSKAHQALMNEIQLVAGSDLSVLITGETGVGKELVAQSIHANSLRREQPLISLNCAALPE  256
            +S   ++L++E+++VA+++L+VL+ GETGVGKEL A+ +HANS R  QP++ +NCAALPE
Sbjct  226  DSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPE  285

Query  257  TLVESELFGHVRGAFSGAVGERRGKFELADGGTLFLDEVGELPLAIQAKLLRVLQSGQLQ  316
            TL ESELFGHVRGAFSGA  +R+G+FE A GGTLFLDE+GELPLAIQAKLLR LQSG++Q
Sbjct  286  TLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQ  345

Query  317  RVGSDREHHVDVRLIAATNRDLAEEVRTGRFRADLYHRLSVYPLRVPPLRERSNDVLLLA  376
            R+G+DR  HV+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER++DVL+LA
Sbjct  346  RLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLA  405

Query  377  GYFLEENRPRLGLRSLRLTREAQAALLDYNWPGNVRELEHLIGRASLKALANHPQRSRIL  436
            G FLE NR RLGLR LRLT +A+ ++L Y WPGNVRELEH+I+RA+LK L++   R  +L
Sbjct  406  GHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALL  465

Query  437  SLGLGDLGLEQQRPSLHGVTTREGNAPEAAVEGELRPAVDAFQRRMISHCLERHAGNWAA  496
            S+  ++LGLE    + H   +    A  +     L++AVD++QR+++ + L+RH G+WA+
Sbjct  466  SIEAAGLGLE---VTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAG  522

Query  497  VARELGLD  504
             AR L +D
Sbjct  523  AARALEMD  530

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  409 bits (1538),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 253/501 (51%), Positives = 363/501 (73%), Gaps = 8/501 (1%)

Query  18   SRELPEGERYRRLLGTLRALLPCDAAALLRLDGDCLVPLAVDGLSTDTLGRRFRVSEHPR  77
            + +LP + R +RL+++LR  + C A  LLRLDGD L   A  GL  + LGR F+V  HPR
Sbjct  50   PSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPR  109

Query  78   FEALLANPQPTRFAADSGLPDPYDGLV-EGLAEHLEVHDCMGCPLFVDERPWGLLTLDSL  136
            +  +L + +P RFAADS LPDPYDGL+ ++ A  L VHDCMG  L V+ R WG +TLD+L
Sbjct  110  LARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDAL  169

Query  137  DPERFEPIDlsalqafaslaaatvsaaERIERLALKAEDEHRRAEVYRQASGQQPRDMVG  196
             P  F++    ++       A+ + +A RI +L     + +       +++ +    ++G
Sbjct  170  RPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSILG  225

Query  197  QSKAHKRLVEEIALVGGSDLTVLITGETGVGKELVAQAIHAASKRAEQPLISLNCAALPD  256
            +S   + L+ E+ +V++++L VL+ GETGVGKEL A+ +HA S RA QP++ +NCAALP+
Sbjct  226  DSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPE  285

Query  257  TLVESELFGHVRGAFTGATNDRRGKFELADGGTLFLDEVGELSLTVQAKLLRVLQSGQLQ  316
            TL ESELFGHVRGAF+GAT+DR+G+FE A GGTLFLDE+GEL+L++QAKLLR LQSG++Q
Sbjct  286  TLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQ  345

Query  317  RLGSDKEHRVDVRLIAATNRDLAEEVRNGRYRADFYHRLSVYPLQVPALRDRGRDVLLLS  376
            RLG+D+  +V+VR+IAATNR L EEVR+GR+RAD+YHRLSVYP+++P+LR+RG+DVL+L+
Sbjct  346  RLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLA  405

Query  377  GFFLEHNRSRMGLGSLRLTSDAQAALLAYDWPGNVRELEHLIGRSALKALGRCATRPKIL  436
            G FLE NR R+GL  LRLT+DA+ ++LAY WPGNVRELEH+I+R+ALK L++  +R  +L
Sbjct  406  GHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALL  465

Query  437  SLSAQDLDLPQAPVDNPALSSTVPAPALLGVTGDLREAVDEFQRNLIAACLERHQHNWAS  496
            S+ A +L+L    V   + +++VPA+        L+ AVD +QR+L+   L+RH+ +WA+
Sbjct  466  SIEAAGLGL---EVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAG  522

Query  497  AARELGLDRANLGRMARRLGL  517
            AAR L +D +NL ++ARRL L
Sbjct  523  AARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  408 bits (1537),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 251/491 (52%), Positives = 366/491 (75%), Gaps = 7/491 (1%)

Query  10   LIPLVADLSRDLPEDERYRRLLHALRDLLPCDATALLRLDGEQLIPLAVDGLSPDTLGRR  69
            L  L+ADL+ DLP   R +RL+ +LRD + C A  LLRLDG++L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVGEHPRLAALLERRGPTRFPADCGLPDPYDGLVEGLHG-HLEIHDCLGCPLYLDDQPW  128
            F+V  HPRLA +LE   P RF+AD  LPDPYDGL+++  +  L +HDC+G  L ++++ W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDTLDPSRFASADLDTLEAFASLAAATVKASERMRDLTRRAEDEHQRAEAYLEAAG  188
            G +TLD+L P+ F ++    L   A+L  ++++ ++    L     + +    + +E+A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  189  ERPREMIGQSAAHKALLEEIRLVGNSELSVLITGETGVGKELVAQSIHRHSPRSGKPMIS  248
            E    ++G+S+  ++LL E+++V+++EL+VL+ GETGVGKEL A+ +H +SPR+ +PM+ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  249  LNCAALPETLVESELFGHVRGAFSGAVNERRGKFELADGGSLFLDEVGELPLAVQAKLLR  308
            +NCAALPETL ESELFGHVRGAFSGA ++R+G+FE A GG+LFLDE+GELPLA+QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  309  VLQSGQLQRVGSDREHRVDVRLIAATNRDLAEEVRAGRFRADLYHRLSVYPLRVPPLRER  368
             LQSG++QR+G+DR  +V+VR+IAATNR L EEVR GRFRADLYHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  369  GRDILLLAGYFLEENRPRLGLRSLRLDHEAQAALLDYRWPGNVRELEHLVGRAALKALGH  428
            G+D+L+LAG FLE NR RLGLR LRL  +A+ ++L Y WPGNVRELEH+++RAALK L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  429  NPERARIITLQRRDLDLPEqatasapptatpqtapapagqtLREATDAYQRRLIQDCLAH  488
               R  +++++  +L+L  + T+ ++P++ P + ++ +  +L+ A D+YQR+L+QD L +
Sbjct  458  AESRHALLSIEAAGLGL--EVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  489  HQGNWASAARE  499
            H+G+WA+AAR 
Sbjct  516  HNGKWAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  408 bits (1536),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 266/507 (53%), Positives = 370/507 (73%), Gaps = 12/507 (2%)

Query  14   VSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQILLSRPEPTRFASDSELPDPYDGLV-NAPDADLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++P + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-HRAELYRQASGQDR  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ L   A   + 
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHQASNRADKPLVSLNCA  251
             ++G+SP  + L+ E+++V+ ++L VL+ GETGVGKEL A+ LH  S RA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ +A+ +++AY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRVSA-TTPGTLPSPAAPLQVVTTPEGGLREAVDIYQRQVIEACLQRH  490
              +L++EA +L+L V++  +P+++P++     +      +L+ AVD YQRQ+++  LQRH
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAA-----IAGETPYSLQAAVDSYQRQLLQDALQRH  516

Query  491  QDNWAAAARELGLDRANLSRLARRLGL  517
            +++WA+AAR L +D +NL +LARRL L
Sbjct  517  NGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  408 bits (1537),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 239/506 (48%), Positives = 364/506 (72%), Gaps = 12/506 (2%)

Query  15   DLANSITNEDRFDRLLSSIRKAINCDAVVLLVYQGEQLKPLAIQGLATDTLGRRFNLSDH  74
            DL++ +    R++RL++S+R  +NC AVVLL  +G++L+  A  GL  + LGR F++  H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  75   PRLSLICSGSQPVRFASDSPLPDPYDGLLLAKEGD-LPVHSCMGLPLYSDNQLMGVVTLD  133
            PRL+ I   ++PVRFA+DS LPDPYDGLL    +  LPVH CMG+ L  + +L G VTLD
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  134  SLSPEAFSEIPERTLQLITALSAATLKTAMQLSGLEQRAQQAHDLVQELTNEALTRDGGE  193
            +L P +F     R L+  ++L    + TA++++ LE+  +  +     L + A+  + + 
Sbjct  168  ALRPGSFDASVARRLRECAPL----IETALRIGQLENEVRGLRLARSGLVEPAVESQNS-  222

Query  194  LIGNSPSMLALKSDIQLVAGSDYTVLILGKTGVGKELVARTLHQRSNRGTQPLVHVNCAS  253
            ++G+SP + +L  ++++VA+++  VL+ G TGVGKEL A+ LH  S R+ QP+VHVNCA+
Sbjct  223  ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAA  282

Query  254  IPETLAESELFGHGKGAFSGAEKERAGKFQLADGGTIFLDEIGELPLSVQSKLLRVLQSG  313
            +PETLAESELFGH +GAFSGA ++R G+F+ A GGT+FLDEIGELPL++Q+KLLR LQSG
Sbjct  283  LPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSG  342

Query  314  EIQPVGKDQVSTVNVRVVAATNRDLAQEVKTGRFRADLYHRLSVYPINVPELKERGDDVL  373
            EIQ +G D+   VNVR++AATNR L +EV+ GRFRADLYHRLSVYP+++P L+ERG+DVL
Sbjct  343  EIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVL  402

Query  374  LLAGYFLEVTARKLGIRQLKIPNDVQQALIAYSWPGNVRELEHVISRASLKA-TRSKNQH  432
            +LAG FLE+   +LG+R L++  D +++++AY+WPGNVRELEHVISRA+LK  +++ ++H
Sbjct  403  MLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRH  462

Query  433  NIISLSTEDLDFERGMPSKINLNQPIQVREVLGSSEAQSLKTMTEAFQAQMISRTLSEHQ  492
             ++S+ + +L++E    +      P  V   +++  + SL++  +++Q Q++  +L  H+
Sbjct  463  ALLSIEAAGLGLEVTTHP-----APASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHN  517

Query  493  GNWTLAAKQLEMDRANLARLAKRLGV  518
            G+W+ AA+ LEMD +NL +LA+RL +
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  408 bits (1534),  Expect = 4e-115, Method: Compositional matrix adjust.
 Identities = 251/503 (50%), Positives = 365/503 (73%), Gaps = 8/503 (1%)

Query  14   VADLSRELPEGERYRRLLQAMRALLPCDAAALLRLDGDSLVPLAVDGLSADTLGRRFKVS  73
            +ADL+ +LP + R +RL+ ++R  + C A  LLRLDGD L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFAVLLSSPGPTRFDSDSELPDPYDGLV-DGLHGHLEVHDCMGCPLFVDDHPWGLLT  132
             HPR+A +L    P RF +DSELPDPYDGL+ D+    L VHDCMG  L V+++ WG +T
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALDTERFERVEldalqafaslaaaTVNVAERIERLALRAEDEHQRAEIYRQASGQQHK  192
            LDAL    F+     ++       A+ ++ A RI +L     + +       +++ + ++
Sbjct  166  LDALRPGSFD----ASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  193  EMIGQSKTHKRLVEEIKWVGGSDLTVLITGETGVGKELVAQAIHAASHRADKPLISLNCA  252
             ++G+S   + L+ E+K V++++L VL+ GETGVGKEL A+ +HA S RA +P++ +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  253  ALPETLVESELFGHVRGAFTGALNERRGKFELANGGTLFLDEVGELSLTVQAKLLRVLQS  312
            ALPETL ESELFGHVRGAF+GA ++R+G+FE A+GGTLFLDE+GEL+L++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  313  GQLQRLGSDKEHQVDVRLIAATNRDLADEVRNGRYRADFYHRLSVYPLQVPALRERGRDV  372
            G++QRLG+D+  +V+VR+IAATNR L +EVR+GR+RAD+YHRLSVYP+++P+LRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  373  LLLAGFFLEQNRSRMGLGSLRLTSDAQAALLAYNWPGNVRELEHLIGRSALKALGNCRER  432
            L+LAG FLE NR R+GL  LRLT+DA+ ++LAY WPGNVRELEH+I+R+ALK L++   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  433  PKILSLSAQDLDLPDVSAPVVEAPVDTGLAVTG--DLRQATEHYQRQVISACLERHQHNW  490
              +LS+ A +L+L +V++    A+V +++A      L+ A + YQRQ++   L+RH+ +W
Sbjct  462  HALLSIEAAGLGL-EVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKW  520

Query  491  ASAARELGLDRANLGRMAKRLGM  513
            A+AAR L +D +NL ++A+RL +
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  407 bits (1530),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 269/507 (54%), Positives = 376/507 (75%), Gaps = 12/507 (2%)

Query  14   VSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQVLLSRPEPTRFASDSELPDPYDGLV-NAPDADLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++P + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-HRAEIYRQASGQDK  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ +   A   ++
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSPAHKRLVEEIRLVGGSDLTVLITGETGVGKELVALALHQASSRADKPLVSLNCA  251
             ++G+SP  + L+ E+++V++++L VL+ GETGVGKEL A  LH  S+RA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRNGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR+G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsHDAQAALLAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ DA+ ++LAY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRVSS-ATPGSLPSPAAPLQVAALPEGGLREAVDLYQRQVIEACLQRH  490
              +L++EA +L+L V++ ++P+S+P++     +A+    +L+ AVD YQRQ+++  LQRH
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAA-----IAGETPYSLQAAVDSYQRQLLQDALQRH  516

Query  491  QDNWAAAARELGLDRANLSRLARRLGL  517
            +++WA+AAR L +D +NL +LARRL L
Sbjct  517  NGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  407 bits (1531),  Expect = 8e-115, Method: Compositional matrix adjust.
 Identities = 266/506 (53%), Positives = 371/506 (74%), Gaps = 10/506 (1%)

Query  14   VSDLSRDLPDQERYRRLLQAMRSLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R  + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQILLSRPEPTRFASDSELPDPYDGLV-NAADADLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ +++ + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEHL-RAEIYRQASGQDK  191
            LDAL PG F++    ++       A+ +  A RI +L     + +L R+ +   A   ++
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSAAHKRLVEEIRLVGGSDLTVLITGETGVGKELVAQALHQASSRADKPLVSLNCA  251
             ++G+S+  + L+ E+++V++++L VL+ GETGVGKEL A+ LH  S+RA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRNGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR+G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsHDAQTALVAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ DA+ +++AY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRVTPPTTGSQPSSAAPLQVAALPEGGLREAVDIYQRQAIEACLQRHQ  491
              +L++EA +L+L VT   +    +++ P  +A+    +L+ AVD YQRQ ++  LQRH+
Sbjct  462  HALLSIEAAGLGLEVTTHPA----PASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHN  517

Query  492  DNWAAAARELGLDRANLSRLARRLGL  517
            ++WA+AAR L +D +NL +LARRL L
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  406 bits (1529),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 265/507 (53%), Positives = 370/507 (73%), Gaps = 12/507 (2%)

Query  14   VSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQILLSRPEPTRFASDSELPDPYDGLV-NAPDADLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++P + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-HRAELYRQASGQDR  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ L   A   + 
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSAAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHQASNRADKPLVSLNCA  251
             ++G+S+  + L+ E+++V+ ++L VL+ GETGVGKEL A+ LH  S RA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ +A+ +++AY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRVSA-TTPGTLPSPAAPLQVVTPPEGGLREAVDIYQRQVIEACLQRH  490
              +L++EA +L+L V++  +P+++P++     +      +L+ AVD YQRQ+++  LQRH
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAA-----IAGETPYSLQAAVDSYQRQLLQDALQRH  516

Query  491  QDNWAAAARELGLDRANLSRLARRLGL  517
            +++WA+AAR L +D +NL +LARRL L
Sbjct  517  NGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  406 bits (1526),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 264/507 (53%), Positives = 372/507 (74%), Gaps = 12/507 (2%)

Query  14   VSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQVLLSRPEPTRFASDSELPDPYDGLV-NAPDADLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++P + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-HRAELYRQASGQDR  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ L   A   + 
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSAAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLISLNCA  251
             ++G+S+  + L+ E+++V+ ++L VL+ GETGVGKEL A+ LH  S+RA +P++ +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ +A+ +++AY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRVSA-ATSGTLPSPTEALQVVTPPEGGLREAVDIYQRQLIEACLQRH  490
              +L++EA +L+L V++ ++++++P++     +      +L+ AVD YQRQL++  LQRH
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAA-----IAGETPYSLQAAVDSYQRQLLQDALQRH  516

Query  491  QDNWAAAARELGLDRANLSRLARRLGL  517
            +++WA+AAR L +D +NL +LARRL L
Sbjct  517  NGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  403 bits (1516),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 246/483 (51%), Positives = 355/483 (74%), Gaps = 10/483 (2%)

Query  14   VADLSRDLPEGERYRRLLHAMRELLPCDAAALLRLDGEWLVPLAVDGLSADTLGRRFKVS  73
            +ADL+ DLP + R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFAVLLSSPGPTRFDSDSALPDPYDGLVAGVHG-QLEVHDCMGCPLFVDDRPWGLLT  132
             HPR+A +L    P RF +DS LPDPYDGL+ +  +  L VHDCMG  L V++R WG +T
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALDTERFERVEldalqafaslaaaTVNVAE---RIERLALRAEIYRQAGGQPYKEIIG  189
            LDAL    F+      L+  A+L  +++ +++    +  L L      +++ ++ + I+G
Sbjct  166  LDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSILG  225

Query  190  QSKTHKRLVQEINLVGGSDLTVLIAGETGVGKELVAQAIHAASTRADKPLISLNCAALPE  249
            +S   + L++E+++V++++L VL+ GETGVGKEL A+ +HA S RA +P++ +NCAALPE
Sbjct  226  DSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPE  285

Query  250  TLVESELFGHVRGAFTGALNERRGKFELANGGTLFLDEVGELSLSVQAKLLRVLQSGQLQ  309
            TL ESELFGHVRGAF+GA ++R+G+FE A+GGTLFLDE+GEL+L++QAKLLR LQSG++Q
Sbjct  286  TLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQ  345

Query  310  RLGSDREHQVDVRLIAATNRDLAEEVRSGRYRADFYHRLSVYPLHVPALRDRGRDVLLLA  369
            RLG+DR  +V+VR+IAATNR L EEVR GR+RAD+YHRLSVYP+H+P+LR+RG+DVL+LA
Sbjct  346  RLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLA  405

Query  370  GYFLEQNRSRMGLGSLRLASDAQAALLAYQWPGNVRELEHAIGRSALKALGNCRERPKIL  429
            G FLE NR R+GL  LRL++DA+ ++LAY WPGNVRELEH I+R+ALK L++   R  +L
Sbjct  406  GHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALL  465

Query  430  SLSARDLDLPDVSAPVIEAQAPPAPVTGD----LRQATEHYQRQLIDACLERHQHNWAGA  485
            S+ A +L+L   + P   + + PA+++G+    L+ A + YQRQL++  L+RH+ +WAGA
Sbjct  466  SIEAAGLGLEVTTHP--APASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGA  523

Query  486  ARE  488
            AR 
Sbjct  524  ARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  401 bits (1509),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 263/504 (53%), Positives = 367/504 (73%), Gaps = 8/504 (1%)

Query  14   VSDLSCDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSADTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQALLSRPEPTRFASDSPLPDPYDGLVNATHAD-LEVHDCMGCPLMVDERPWGLLT  132
             HPR+  +L   EP RFA+DS LPDPYDGL++ + A  L VHDCMG  L V+ R WG +T
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-QRAEVYRQASSQAQ  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ +   A    +
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSKAHKHLVEEIRLVGGSDLTVLITGETGVGKELVAQALHRASNRADKPMISLNCA  251
             ++G+S   + L+ E+++V++++L VL+ GETGVGKEL A+ LH  S RA +PM+ +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLAVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPLA+QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHQVDVRLIAATNRDLAEEVRNGNYRADFYHRLSVYPLQVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L EEVR+G +RAD+YHRLSVYP+++PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQNrsrlglgslrlssDAQAALLAYDWPGNVRELEHLIGRSALKALGQHGQR  431
            L+LAG FLE NR RLGL  LRL++DA+ ++LAY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PKILTLEAADLDLRNVAPAIRAEAEMPPVDAPLPEGGLREAMDDYQRQIVEACLKRHGDN  491
              +L++EAA+L+L   + +  A A +P+  A     +L+ A+D YQRQ+++  L+RH ++
Sbjct  462  HALLSIEAAGLGLEVTTHP--APASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGK  519

Query  492  WAAAARELGLDRANLSRLAKRLGL  515
            WA+AAR L +D +NL +LA+RL L
Sbjct  520  WAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  401 bits (1509),  Expect = 4e-113, Method: Compositional matrix adjust.
 Identities = 242/504 (49%), Positives = 360/504 (72%), Gaps = 10/504 (1%)

Query  15   DLANSITNEDRFDRLLSSIRKAINCEAVVLLVNRGEQLTPLATQGLAPDTLGRRFKLSDH  74
            DL++ +    R++RL++S+R  +NC AVVLL   G++L   A+ GL  + LGR F++  H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  75   PRLALICAATQPVRFPSDSPLADPYDGLLLAKDGD-LPVHSCMGLPLYSDNKLIGVVTLD  133
            PRLA I    +PVRF++DS L+DPYDGLL    +  LPVH CMG+ L  + +L G VTLD
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  134  SLRPNAFNDISDRTLQLISALSAATLKTAIQLKALEQRAQQAQDLLQELTHEALTRDGGE  193
            +LRP +F+    R L+  ++L  ++L+ +     LE+  +  +     L + A+  + + 
Sbjct  168  ALRPGSFDASVARRLRECAPLIETALRIG----QLENEVRGLRLARSGLVEPAVESQNS-  222

Query  194  LIGNSPSMQALKSEIQLVASSDYTVLVLGETGVGKELVARTLHRCSERSNHPLIHLNCAS  253
            ++G+SP +++L  E+++VA ++  VL+ GETGVGKEL A+ LH  S R+ +P++H+NCA+
Sbjct  223  ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAA  282

Query  254  IPETLAESELFGHAKGAFSGAEKERPGKFQLADGGTIFLDEVGELPLSVQGKLLRVLQSG  313
            +PETLAESELFGH +GAFSGA ++R G+F+ A GGT+FLDE+GELPL++Q+KLLR LQSG
Sbjct  283  LPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSG  342

Query  314  EIQPVGKDQVSMVNVRVIAATNRDLAEEVKVGRFRADLYHRLSVYPVRIPSLKERNNDIL  373
            EIQ +G D+   VNVR+IAATNR L EEV+ GRFRADLYHRLSVYPV+IP+L+ER +D+L
Sbjct  343  EIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVL  402

Query  374  LLAGYFLEVTARKLGVRQLKIRPDVENALLEYTWPGNVRELEHVISRASLKATRHAQ-QQ  432
            +LAG FLE+   +LG+R L++ +D E ++L Y+WPGNVRELEHVISRA+LK   +A+ ++
Sbjct  403  MLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRH  462

Query  433  DIISISLADLDFETGLAQPPQLKPKEALVTHLKEQIPLKSLTEDFQRQYISDALVVHHGN  492
             ++SI  A+L++E   ++P+      A+  +     +L++  + +QRQ + DAL  H+G+
Sbjct  463  ALLSIEAAGLGLEVT-THPAPASVPAAIAGE--TPYSLQAAVDSYQRQLLQDALQRHNGK  519

Query  493  WTNAAKQLGMDRANLARLAKRLGV  516
            W+ AA+ L MD +NL +LA+RL +
Sbjct  520  WAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  400 bits (1503),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 268/508 (53%), Positives = 379/508 (75%), Gaps = 8/508 (1%)

Query  10   LIPLVADLSRELDDGEryrrllaalrqlFPCDAVALLRLDGEVLVPLAVEGLSPDTLGRR  69
            L  L+ADL+ +L  + R +RL+A+LR+ F C AV LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVSEHPRLAALLEHAGPTRFAADCGLPDPYDGLVEGLHG-HLEVHDCLGCPLYLDEQLW  128
            F+V  HPRLA +LE++ P RFAAD  LPDPYDGL+++  +  L VHDC+G  L ++ +LW
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDSLDPASFGRFELDNLEAFASLAAATVKVSERISGLAQRVEAER-QLTELYKQAR  187
            G +TLD+L P+SF+      L   A+L  +++++++    L + V + R   + L   A 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQ----LENEVRGLRLARSGLVEPAV  217

Query  188  QQPRELVGQSAALRKLQEEIRLVGDSPLTVLITGETGVGKELVAEAIHAASPRAQRPLVS  247
            +    ++G+S+ LR L  E+++V+D+ L VL+ GETGVGKEL A+ +HA SPRA++P+V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  248  INCAALPDALVESELFGHVRGAFSGAMSERSGKFELADGGSLFLDEVGELPLAIQAKLLR  307
            +NCAALP++L ESELFGHVRGAFSGA  +R G+FE A GG+LFLDE+GELPLAIQAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  308  VLQSGQLQRVGSDREHRVDVRVIAATNRDLAAEVRAGRFRADFYHRLSVYPLPVPPLRER  367
             LQSG++QR+G+DR  +V+VR+IAATNR L  EVR GRFRAD+YHRLSVYP+ +PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  368  GRDVLLLAGYFLEENrarlglrslrlsTDAQKALLGHDWPGNVRELEHLIGRAAIKALAR  427
            G+DVL+LAG FLE NR RLGLR LRL++DA++++L+  WPGNVRELEH+I+RAA+K L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  428  HGERPRILSLEAQDLDLPTAEALRSVDEGLAPAEPLPAGVELRSAVDAFQRRLIEQCLAR  487
               R  +LS+EA +L+L  +   ++   ++++A +  +   L++AVD++QR+L+++ L R
Sbjct  458  AESRHALLSIEAAGLGLEVTT--HPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  488  HQGKWADAARELGIDRANLSRLAKRLGL  515
            H+GKWA+AAR L +D +NL +LA+RL L
Sbjct  516  HNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  399 bits (1502),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 269/505 (54%), Positives = 370/505 (74%), Gaps = 9/505 (1%)

Query  14   VSDLSRDLPDQERYRRLLQAMRGLLTCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQVLLSSREPTRFASDSELPDPYDGLV-NAPDANLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++P + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELGalqafaslaaatvtvaERIEHLALRAEDEH-HRAEIYRQASGQDK  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ +   A   ++
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSPAHKRLVEEIRLVGGSDLTVLITGETGVGKELVAQALHQASNRADKPLVSLNCA  251
             ++G+SP  + L+ E+++V++++L VL+ GETGVGKEL A+ LH  S RA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRIGNFRADFYHRLSVYPLQVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR G FRAD+YHRLSVYP+++PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlssEAQAALLAYDWPGNVRELEHLIGRSALKALGQHSDR  431
            L+LAG FLE NR RLGL  LRL+++A+ ++LAY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRatatpgtppspavplpatplpEGGLREAVDDYQRQLIEACLQRHQE  491
              +L++EA +L+L  T+ P+ ++ PA     TP    +L+ AVD YQRQL++  LQRH+ 
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY---SLQAAVDSYQRQLLQDALQRHNG  518

Query  492  NWAAAARELGLDRANLSRLARRLGL  516
            +WA+AAR L +D +NL +LARRL L
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  398 bits (1497),  Expect = 4e-112, Method: Compositional matrix adjust.
 Identities = 247/479 (52%), Positives = 344/479 (72%), Gaps = 8/479 (1%)

Query  40   CDAAALLRLDGDCLVPLAVDGLSTDTLGRRFRVSEHPRFEALLASPQPTRFAADSGLPDP  99
            C A  LLRLDGD L   A  GL  + LGR F+V  HPR+  +L   +P RFAADS LPDP
Sbjct  72   CSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEGEPVRFAADSELPDP  131

Query  100  YDGLV-EGLAEHLEVHDCMGCPLFVDERPWGLLTLDSLDPERFEPIDlsalqafaslaaa  158
            YDGL+ ++ A  L VHDCMG  L V+ R WG +TLD+L P  F++    ++       A+
Sbjct  132  YDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDA----SVARRLRECAP  187

Query  159  tvsaaERIERLALKAEDEHRRAEVYRQASGQQPRDMVGQSKAHKRLVEEIALVGSSDLTV  218
             + +A RI +L     + +       +++ +    ++G+S   + L+ E+ +V+ ++L V
Sbjct  188  LIETALRIGQLENEVRGLRLARSGLVEPAVESQNSILGDSPVLRGLLKELKIVADAELPV  247

Query  219  LITGETGVGKELVAQAIHAASKRAEQPLISLNCAALPDTLVESELFGHVRGAFTGATNDR  278
            L+ GETGVGKEL A+ +HA S RA QP++ +NCAALP+TL ESELFGHVRGAF+GAT+DR
Sbjct  248  LLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDR  307

Query  279  RGKFELADGGTLFLDEVGELSLTVQAKLLRVLQSGQLQRLGSDKEHRVDVRLIAATNRDL  338
            +G+FE A GGTLFLDE+GEL+L++QAKLLR LQSG++QRLG+D+  +V+VR+IAATNR L
Sbjct  308  QGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTL  367

Query  339  AEEVRNGRYRADFYHRLSVYPLQVPALRDRGRDVLLLSGFFLEHNRSRMGLGSLRLTSDA  398
             EEVR+GR+RAD+YHRLSVYP+++P+LR+RG+DVL+L+G FLE NR R+GL  LRLT+DA
Sbjct  368  IEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADA  427

Query  399  QAALLAYDWPGNVRELEHLIGRSALKALGRCATRPKILSLSAQDLDLPQAPVDNLTPSSI  458
            + ++LAY WPGNVRELEH+I+R+ALK L++  +R  +LS+ A +L+L    V    +++ 
Sbjct  428  ERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGL---EVTTHPAPAS  484

Query  459  SPAPTAQGVTGDLREAVDEFQRTLIAACLERHQHNWAGAARELGLDRANLGRMARRLGL  517
             PA+ A      L+ AVD +QR L+   L+RH+ +WAGAAR L +D +NL ++ARRL L
Sbjct  485  VPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  397 bits (1495),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 267/505 (53%), Positives = 368/505 (73%), Gaps = 9/505 (1%)

Query  14   VSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQILLSSREPTRFASDSELPDPYDGLV-NAPDANLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++P + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELGalqafaslaaatvtvaERIEHLALRAEDEH-HRAEIYRQASGQDK  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ +   A   ++
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSPAHKRLVEEIRLVGGSDLTVLITGETGVGKELVAQALHQASNRADKPLVSLNCA  251
             ++G+SP  + L+ E+++V++++L VL+ GETGVGKEL A+ LH  S RA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRIGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlssEAQAALLAYDWPGNVRELEHLIGRSALKALGQHSDR  431
            L+LAG FLE NR RLGL  LRL+++A+ ++LAY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRatatpgtppspaaplpaaplpegglREAVDDYQRQLIEACLQRHQE  491
              +L++EA +L+L        P++++ P + A     +L+ AVD YQRQL++  LQRH+ 
Sbjct  462  HALLSIEAAGLGL---EVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNG  518

Query  492  NWAAAARELGLDRANLSRLARRLGL  516
            +WA+AAR L +D +NL +LARRL L
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  397 bits (1495),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 261/506 (52%), Positives = 371/506 (74%), Gaps = 10/506 (1%)

Query  14   VSDLSRDLPDQERYRRLLQAMRSLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRVS  73
            ++DL+ DLP   R +RL+ ++R  + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQILLSRPEPTRFASDSELPDPYDGLV-NATDADLEVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L   EP RFA+DSELPDPYDGL+ ++  + L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-HRAEIYRQASGQDK  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ +   A   ++
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSPAHKRLVEEIRLVGGSDLTVLITGETGVGKELVAQALHQASSRADKPLISLNCA  251
             ++G+SP  + L+ E+++V++++L VL+ GETGVGKEL A+ LH  S+RA +P++ +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPL++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHRVDVRLIAATNRDLAAEVRNGNFRADFYHRLSVYPLHVPPLRERGRDV  371
            G++QRLG+DR  +V+VR+IAATNR L  EVR+G FRAD+YHRLSVYP+H+PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsnEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ +A+ +++AY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLEAIDLDLRVspampgsppshaapspaaTLPEGGLREAVDIYQRQVIEACLQKHQ  491
              +L++EA +L+L V+   + ++ + A ++ ++     +L+ AVD YQRQ+++  LQ+H+
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY----SLQAAVDSYQRQLLQDALQRHN  517

Query  492  DNWAAAARELGLDRANLSRLARRLGL  517
            ++WA+AAR L +D +NL +LARRL L
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  397 bits (1495),  Expect = 5e-112, Method: Compositional matrix adjust.
 Identities = 245/502 (49%), Positives = 362/502 (73%), Gaps = 5/502 (0%)

Query  14   VADLSRELPEGERYRRLLQTMRALLPCDAAALLRLNGEWLVPLAVDGLSPDTLGRRFKIS  73
            +ADL+ +LP + R +RL+ ++R  + C A  LLRL+G++L   A  GL  + LGR F++ 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFEILLSSPGPTRFDSDSQLPDPYDGLVAGLHG-HLEVHDCMGCPLFIDDQPWGLLT  132
             HPR+  +L    P RF +DS+LPDPYDGL+ +  +  L VHDCMG  L ++++ WG +T
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALDNERFERVEldalqafaslaaaTVNVAERIERLALRAEDEHQRAEIYRQASGQQHK  192
            LDAL    F+     ++       A+ ++ A RI +L     + +       +++ + ++
Sbjct  166  LDALRPGSFD----ASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  193  EMIGQSKAHKRLVEEIKLVGGSDLTVLITGETGVGKELVAQAIHAASSRADKPMISLNCA  252
             ++G+S   + L+ E+K+V++++L VL+ GETGVGKEL A+ +HA S+RA +PM+ +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  253  ALPETLVESELFGHVRGAFTGALNERRGKFELANGGTLFLDEVGELSLSVQAKLLRVLQS  312
            ALPETL ESELFGHVRGAF+GA ++R+G+FE A+GGTLFLDE+GEL+L++QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  313  GQLQRLGSDKEHQVDVRLIAATNRDLAEEVRNGRYRADFYHRLSVYPLQVSALRERGRDV  372
            G++QRLG+D+  +V+VR+IAATNR L EEVR+GR+RAD+YHRLSVYP+++++LRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  373  LLLAGFFLEQNRSRMGLGSLRLTGDAQAALLAYNWPGNVRELEHLIGRSALKALGNCRER  432
            L+LAG FLE NR R+GL  LRLT+DA+ ++LAY WPGNVRELEH+I+R+ALK L++   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  433  PKIlslsaldldlpdvsTAVAEQAPAQSLPMVSGDLRQATEHYQRQLISACLERHQRNWA  492
              +LS+ A +L+L   + + +   PA      +  L+ A + YQRQL+   L+RH+ +WA
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWA  521

Query  493  SAARELGLDRANLGRMAKRLGL  514
            +AAR L +D +NL ++A+RL L
Sbjct  522  GAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  396 bits (1490),  Expect = 1e-111, Method: Compositional matrix adjust.
 Identities = 249/512 (49%), Positives = 372/512 (73%), Gaps = 14/512 (2%)

Query  10   LIRLVSDLSSDLPAEERYSRLLQEVVNIFPCDAAALLQFENGYLKPLAVRGLSVDTMGRR  69
            L RL++DL+SDLPA  R  RL+  + + F C A  LL+++ + L+  A  GL ++ +GR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FKVDEHPRLQRLLHSRDPVRFAADSELPDPYDGLVENA-GHKLHVHDCMGASLHINNRPW  128
            F+V+ HPRL R+L+  +PVRFAADSELPDPYDGL++++ +  L VHDCMG +L+++ R W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GVLTLDAMDPRRFDQIEPTILKTFIGLTEATVKaagriaalaara-EHEHQVAATLQEQN  187
            G +TLDA+ P  FD   +  L+    L E++++ +     + +    +   V ++++ QN
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  188  QQVEIVGSSPAIEKLCNEIDVVARSDLTVLVLGETGVGKELVARSVHNKSQRNKKSLVYI  247
                I+G SP +  L +E+ +VA ++L VL+ GETGVGKEL A+ +H +S R ++++V +
Sbjct  222  ---SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHV  278

Query  248  NCAALPEGIAESELFGHVKGAFSGATSDRAGKFEIAHGGTLFLDEIGELPLSLQAKLLRV  307
            NCAALPE +AESELFGHV+GAFSGAT DR G+FE A GGTLFLDEIGELPL++QAKLLR 
Sbjct  279  NCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRA  338

Query  308  LQSGEIQRVGSDRHKEVDVRIVAATNRNLLEEIERKQFRADLYHRLSVYPITVPPLRDRE  367
            LQSGEIQR+G+DR K+V+VRI+AATNR L+EE+ + +FRADLYHRLSVYP+ +PPLR+R 
Sbjct  339  LQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERG  398

Query  368  NDILLLAGYFMEANQRRLGVRGlrlsqaaqqallaYNWPGNVRELEHLISRAALKAIAGK  427
            +D+L+LAG F+E N+ RLG+R LRL+  A++++LAY WPGNVRELEH+ISRAALK ++  
Sbjct  399  HDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQA  458

Query  428  KHPDPVI-LQEKNLGLHLVDSDTDSVEEELITGLTPEWSRFSHFDNVRDAQDEFLRYLIQ  486
               ++++ ++   LGL++    + +     I+G TP    +S    ++ A D + R L+Q
Sbjct  459  ESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETP----YS----LQAAVDSYQRQLLQ  510

Query  487  ERLDQFDGNRSAAARSLGLDRGNFHRLMKRLE  518
            + L++ +G++++AAR+L +D +N+++L +RL+
Sbjct  511  DALQRHNGKWAGAARALEMDPSNLRKLARRLN  542

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  395 bits (1485),  Expect = 3e-111, Method: Compositional matrix adjust.
 Identities = 271/510 (54%), Positives = 376/510 (74%), Gaps = 12/510 (2%)

Query  10   LIPLVADLSRELDDGEryrrllaalrqlFPCDAVALLRLDGEILVPLAVEGLSADTLGRR  69
            L  L+ADL+ +L  + R +RL+A+LR+ F C AV LLRLDG+ L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVSEHPRLAALLEHAGPTRFAADCGLPDPYDGLVEGLHG-HLEVHDCLGCPLYLDEQLW  128
            F+V  HPRLA +LE++ P RFAAD  LPDPYDGL+++  +  L VHDC+G  L ++ +LW
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDSLDPASFGRldldsldafaslaaaTVKVSERISGLAQRVEAER-QLTELYKQAR  187
            G +TLD+L P+SF+     S+       A+ +  + RI+ L + V + R   + L   A 
Sbjct  162  GAVTLDALRPGSFD----ASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV  217

Query  188  QRPRELVGQSVALRKLQDEIRLVGDSPLTVLITGETGVGKELVAEAIHAASPRAQRPLVS  247
            +    ++G+S  LR L  E+++V+D+ L VL+ GETGVGKEL A+ +HA SPRA++P+V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  248  INCAALPDALVESELFGHVRGAFSGAMSERSGKFELADGGSLFLDEVGELPLAIQAKLLR  307
            +NCAALP++L ESELFGHVRGAFSGA  +R G+FE A GG+LFLDE+GELPLAIQAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  308  VLQSGQLQRVGSDREHRVDVRVIAATNRDLAAEVRAGRFRADLYHRLSVYPLPVPPLRER  367
             LQSG++QR+G+DR  +V+VR+IAATNR L  EVR GRFRADLYHRLSVYP+ +PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  368  GRDVLLLAGYFLEENrarlglrslrlsaEAQKALLGHDWPGNVRELEHLIGRASIKALAR  427
            G+DVL+LAG FLE NR RLGLR LRL+A+A++++L+  WPGNVRELEH+I+RA++K L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  428  HGERPRILSLDVQDLDL--PSSETRAAVEAVLASGEPVPEGVELRTAVDAFQRQLIEQCL  485
               R  +LS++  +L+L   +  + A+V A +A+  P +    L++AVD++QRQL+++ L
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYS----LQAAVDSYQRQLLQDAL  513

Query  486  ARHQGKWADAARELGVDRANLSRLAKRLGI  515
             RH+GKWA+AAR L +D +NL +LA+RL +
Sbjct  514  QRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  393 bits (1478),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 238/461 (52%), Positives = 340/461 (74%), Gaps = 10/461 (2%)

Query  72   GLTGDTLGRRFRVSDHPRFEALLSSEHPTRFPAHSELPDPYDGLVQGVSG-HLEVHDCLG  130
            GL  + LGR F+V  HPR+  +L   +P RF+A+SELPDPYDGL+Q+ ++  L VHDC+G
Sbjct  92   GLDLEVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMG  151

Query  131  CPLLIGGRPWGLLTLDSLDPERFDSIDMNTLQAFLSLAAATVSVAERIDTLERNTeeerq  190
              L + GR WG +TLD+L P  FD+     L+   +L  +++    RI+ LE +    R 
Sbjct  152  MTLRVQGRLWGAVTLDALRPGSFDASVARRLRECAPLIETAL----RIGQLENEVRGLRL  207

Query  191  raeayrqaSGQSSRELVGSSTAHQQLMNEIRVVANSDLTVLITGETGVGKELVANAIHTG  250
               +  +++ +S   ++G S   + L++E+++VA+++L VL+ GETGVGKEL A+ +H+ 
Sbjct  208  ARSGLVEPAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHAN  267

Query  251  SPRANKPMISLNCAALPDTLVESELFGHVRGAFSGASSDRRGKFELADGGTLFLDEVGEL  310
            SPRA +PM+ +NCAALP+TL ESELFGHVRGAFSGA+ DR+G+FE A GGTLFLDE+GEL
Sbjct  268  SPRARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGEL  327

Query  311  PLGVQAKLLRVLQNGQLQRIGSDSEHKVDVRLIAATNRDLAEEVRDGRFRADLYHRLSVY  370
            PL++QAKLLR LQ+G++QR+G+D    V+VR+IAATNR L EEVR GRFRADLYHRLSVY
Sbjct  328  PLAIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVY  387

Query  371  PLRVPPLRERGRDVLLLAGFFLEENRARLGLLSIRLGQDAQTALLSYSWPGNVRELEHMI  430
            P+++PPLRERG+DVL+LAG FLE NR RLGL  +RL  DA+ ++L+Y+WPGNVRELEH+I
Sbjct  388  PVHIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVI  447

Query  431  GRSAFKALSRHPERPRILTLTAADLGMSASNGGEVaatasnagaadagaanaadfrsaVT  490
            +R+A+K LS+   R  +L++ AA+LG+  +        A+ + +A  ++  +  +++AV 
Sbjct  448  SRAALKVLSQAESRHALLSIEAAGLGLEVTT-----HPAPASVPAAIAGETPYSLQAAVD  502

Query  491  AYERTLVSDALERNNHNWAAVARSLGMDRANLNRLAKRLGL  531
            +Y+R L+ DAL+R+N +WA+ AR+L MD +NL +LA+RL L
Sbjct  503  SYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  393 bits (1479),  Expect = 9e-111, Method: Compositional matrix adjust.
 Identities = 273/507 (54%), Positives = 362/507 (72%), Gaps = 6/507 (1%)

Query  5    LVPLIEDLSSEMPDTERYRRLLHTLRALFPSDATALLRLDGDTLVPLAIDGLSGDTLGRR  64
            L  L+ DL+S++P + R +RL+ +LR  F   A  LLRLDGD L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  65   FRVSEHPRFARILAREEPTRFPASSDLPDPYDGLVK-GLSGHLEVHDCLGCPLFVRGRAW  123
            F+V  HPR+ARIL   EP RF+A S+LPDPYDGL++ + +  L VHDC+G  L V+GR W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  124  GLLTLDALDPARFDGVDMaslqaflslaaaTVSVAERIDSLARTSEAERQRAEIYRQASG  183
            G +TLDAL P+ FD+    S+   L   A+ +  A RI+ L     + R       +++ 
Sbjct  162  GAVTLDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV  217

Query  184  PRRREMIGSSEPHKRLLEEIAIVASSDLTVLVAGETGVGKELVASEIHALSPRADKPLVS  243
              +  ++G S   + LL E+ IVA ++L VL+ GETGVGKEL A  +HA SPRA +P+V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  244  LNCAALPDTLVESELFGHVRGAFSGASSDRRGKFELADGGTLFLDEVGELPLPVQAKLLR  303
            +NCAALP+TL ESELFGHVRGAFSGA+ DR+G+FE A GGTLFLDE+GELPL++QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  304  VLQNGQLQRIGSDSEHKVDVRLIAATNRDLAEEVRAGRFRADFYHRLSVYPLVVPPLRER  363
             LQ+G++QR+G+D    V+VR+IAATNR L EEVR GRFRAD+YHRLSVYP+ +PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  364  GRDVLLLAGFFLEENrsrlgllslrlsTDAQAALLAYRWPGNVRELEHLIGRSALKALAA  423
            G+DVL+LAG FLE NR RLGL  LRL++DA+ ++LAY WPGNVRELEH+I+R+ALK L+ 
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  424  HRERPRILTLTAADLALNGDapgaqaasplaapaltpgaDFRAAVTAYERALVVDALERH  483
               R  +L++ AA+L+L+     + +AS  AA A      ++AAV +Y+R L+ DAL+RH
Sbjct  458  AESRHALLSIEAAGLGLEVT-THPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRH  516

Query  484  RQNWASAARELGMDRANLNRLAKRLGL  510
              +WA+AAR L MD +NL +LA+RL L
Sbjct  517  NGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  391 bits (1472),  Expect = 3e-110, Method: Compositional matrix adjust.
 Identities = 251/525 (48%), Positives = 364/525 (70%), Gaps = 22/525 (4%)

Query  1    MNIVPFID-IVEDLNRDLIKSERYLRLILAIQRAIPCDVVALLKLKHDHLVPVAVVGLKQ  59
            ++  +F++ ++ DL  DL  + R  RL+ +++  + C  V LL+L  D+L   A VGL  
Sbjct  36   VKSTSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDL  95

Query  60   QALARQFSINHHPRLQQILANPHITRFDADSTLPDPYDGLVDDGSE-QLHVHDCMGSTIY  118
            + L+R F +++HPRL +IL + +  RF ADS LPDPYDGL++D++   L VHDCMG T+ 
Sbjct  96   EVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLR  155

Query  119  IDGKAWGVLTLDAMKAGSFDSLNPTETRayiaavaaaiSTSEHIEALEVQVERNHQVAQC  178
            ++G+ WG +TLDA+++GSFD+  +   R   + +     T+ +I  LE +V R  ++A+ 
Sbjct  156  VQGRLWGAVTLDALRPGSFDASVARRLRECAPLI----ETALRIGQLENEV-RGLRLARS  210

Query  179  ML---ATAGPSSIIGNSVAITDLLSEINTVAVSDLSVLITGETGVGKELVAKSIHQQSRR  235
             L   A  + +SI+G+S  + +LL E++ VA ++L+VL+ GETGVGKEL A  +H +S R
Sbjct  211  GLVEPAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPR  270

Query  236  SEQPLVQINCAALPESIVESELFGHVKGAYSGAVSDRRGRFELADGGTLFLDEVGELPLA  295
            + QP+V++NCAALPE++ ESELFGHV+GA+SGA  DR+GRFE A GGTLFLDE+GELPLA
Sbjct  271  ARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLA  330

Query  296  VQAKLLRALQNGEIQRVGSDNIIVVDVRIVAATNRNLQLEVKEGRFRADLYHRLSVYPLP  355
            +QAKLLRALQ+GEIQR+G+D    V+VRI+AATNR L  EV+ GRFRADLYHRLSVYP+ 
Sbjct  331  IQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVH  390

Query  356  VPPLRERGKDVILLAGYFLEKSQHQLGVAKLRLQQTAIEQLTQYHWPGNVRELEHLLSRA  415
            +PPLRERG DV++LAG FLE ++ +LG+  LRL   A   +  Y WPGNVRELEH++SRA
Sbjct  391  IPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRA  450

Query  416  ALRAISEQGRHASIISISRVHLGSEFVVSHTVAPaiaevdiindnnaaaaLSQVLTLGLR  475
            AL+ +S+   + +++SI    LG E V +H  ++           + +AA++     +L+
Sbjct  451  ALKVLSQAESRHALLSIEAAGLGLE-VTTHPAPA-----------SVPAAIAGETPYSLQ  498

Query  476  DSTDEYQRQIIQTVLATERGNLAAVARSLQLDRSNLIRTMRRLGL  520
             + D YQRQ++Q  L  + G+ A+ AR+L++D SNL +  RRL L
Sbjct  499  AAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  390 bits (1467),  Expect = 8e-110, Method: Compositional matrix adjust.
 Identities = 249/477 (53%), Positives = 349/477 (74%), Gaps = 6/477 (1%)

Query  40   CDATALLRLDGDQLVPMAVDGLSQDTLGRRFKVAEHPRLQALMEHRGVTRFAADCGLPDP  99
            C A  LLRLDGD+L   A  GL  + LGR F+V  HPRL  ++E+    RFAAD  LPDP
Sbjct  72   CSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEGEPVRFAADSELPDP  131

Query  100  YDGLV-EGHQDHLEVHDCMGCPIYLDDRPWGVLTLDAMDPSRFDGQDLEVLDGFASLAAA  158
            YDGL+ ++    L VHDCMG  + +++R WG +TLDA+ P+ FD+     L   A+L  +
Sbjct  132  YDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDASVARRLRECAPLIET  191

Query  159  TVKAVDRMDSLTRRAQDEQQLAEVYRQAAGQARPQELIGQSAAHKALVEEIKLVGGSELT  218
            +++ ++++++  R      +LA      ++    + ++G+S+  ++L+ E+K+V+++EL 
Sbjct  192  ALR-IGQLENEVR----GLRLARSGLVEPAVESQNSILGDSPVLRGLLKELKIVADAELP  246

Query  219  VLISGETGVGKELVAQSIHGGSLRSRHPLISLNCAALPDTLVESELFGHVRGAFSGAVND  278
            VL+ GETGVGKEL A+ +H+ S R+R+P++ +NCAALP+TL ESELFGHVRGAFSGA +D
Sbjct  247  VLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHVRGAFSGATQD  306

Query  279  RKGKFELADEGTLFLDEVGELPLAIQAKLLRVLQSGQLQRVGSDREHRVNVRVIAATNRD  338
            R+G+FE A  GTLFLDE+GELPLAIQAKLLR LQSG++QR+G+DR  +VNVR+IAATNR 
Sbjct  307  RQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRT  366

Query  339  LAEEVRAGRFRADLYHRLSVYPLRVPPLRERGRDVLLLTGFFLEENrprlglrslrlsQD  398
            L EEVR GRFRADLYHRLSVYP+++PPLRERG+DVL+L+G FLE NR RLGLR LRL+ D
Sbjct  367  LIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTAD  426

Query  399  AQAALLGYDWPGNVRELEHLIGRAALKALAACPERPRILTLTAQDLALPGNQPMTPCSPL  458
            A+ ++L+Y WPGNVRELEH+I+RAALK L+    R  +L++ A +L+L      +P S  
Sbjct  427  AERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGLEVTTHPAPASVP  486

Query  459  DAPVATVVGDLRDAVDQYQRQLIMASLERQQDNWAASARELGLDRANLLRLAKRLGI  515
             A  +     L+ AVD YQRQL+  +L+R++++WA++AR L +D +NL +LA+RL +
Sbjct  487  AAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  388 bits (1458),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 253/486 (53%), Positives = 354/486 (73%), Gaps = 16/486 (3%)

Query  38   FPCDAVALLRLDGDVLVPLSVEGLSADTMGRRFKVSEHPRLHELLQNRGPTRFAADCELP  97
            F C AV LLRLDGD L   +  GL  + +GR F+V  HPRL  +L++  P RFAAD ELP
Sbjct  70   FNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEGEPVRFAADSELP  129

Query  98   DPYDGLL-EGQHGHLEVHDCLGCPLYVKEQLWGLLTLDSLQSSSFGRVDLGMLEafasla  156
            DPYDGLL ++    L VHDC+G  L V+ +LWG +TLD+L+++SF        +A  +  
Sbjct  130  DPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSF--------DASVARR  181

Query  157  aatvaaSERISLLMGRVEDEQRRADLYKQA---AAAVRPREMIGQSPRHKALLQEIELVG  213
                A+    +L +G++E+E R   L + +   +A      ++G+SP  ++LL+E+ +V+
Sbjct  182  LRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSILGDSPVLRGLLKELKIVA  241

Query  214  SSDLTVLISGETGVGKELVAEALHGASARATRPMVSINCAALPDTLVESELFGHVRGAFS  273
             ++L VL+ GETGVGKEL A+ LH+ S+RA +PMV +NCAALP+TL ESELFGHVRGAFS
Sbjct  242  DAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHVRGAFS  301

Query  274  GAVSERRGKFELADGATLFLDEVGELPLAVQSKLLRVLQSGQLQRVGSDREHRVDVRVLA  333
            GA  +R+G+FE A G+TLFLDE+GELPLA+Q+KLLR LQSG++QR+G+DR  +V+VR++A
Sbjct  302  GATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVNVRIIA  361

Query  334  ATNRDLAEEVRAGRFRADLYHRLSVYPLKVPALRERGRDVLLLAGYFLEDNrarlglrsl  393
            ATNR L EEVR GRFRADLYHRLSVYP+ +P+LRERG+DVL+LAG FLE NR RLGLR L
Sbjct  362  ATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRLGLRCL  421

Query  394  rlaPDVQKTLLQHDWPGNVRELEHLIGRAAIKALSACAERPQILTIDSRALDLHPAHRSY  453
            RL++D ++T+L   WPGNVRELEH+I+RAA+K LS    R  +L+I++ +L+L+ + ++ 
Sbjct  422  RLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGLEVTTHP-  480

Query  454  IeeevsgasesevPPAGQSLRDAVDDYQRRLIEAALDRHAGRWTDVARELAVDRANLQRL  513
                 ++ + +    +  SL+ AVD YQR+L++ AL+RH G+W++ AR L +D +NL++L
Sbjct  481  ---APASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKL  537

Query  514  ARRLGL  519
            ARRL L
Sbjct  538  ARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  385 bits (1447),  Expect = 3e-108, Method: Compositional matrix adjust.
 Identities = 251/487 (52%), Positives = 358/487 (74%), Gaps = 8/487 (1%)

Query  14   VSDLSRDLPEEERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSADTLGRRFKVS  73
            ++DL+ DLP   R +RL+ ++R+ + C A  LLRLDG++L   A  GL  + LGR F+V 
Sbjct  46   LADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVE  105

Query  74   EHPRFQVLLSRAEPTRFPSDSQLPDPYDGLV-NAHDVDLHVHDCMGCPLMVDERPWGLVT  132
             HPR+  +L  +EP RF++DS+LPDPYDGL+ ++    L VHDCMG  L V+ R WG VT
Sbjct  106  RHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVT  165

Query  133  LDALTPGQFQSLELDalqafaslaaatvtvaERIEHLALRAEDEH-QRAEIYRQASGQDK  191
            LDAL PG F++    ++       A+ +  A RI +L     + +  R+ +   A   ++
Sbjct  166  LDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  192  ELIGQSPAHKRLLDEIRLVGGSDLTVLITGETGVGKELVAQALHQASHRANKPLISLNCA  251
             ++G+SP  + LL E+++V++++L VL+ GETGVGKEL A+ LH  S RA +P++ +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  252  ALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLAVQAKLLRVLQS  311
            ALP+TL ESELFGHVRGAF+GA  +R+G+FE A+GGTLFLDE+GELPLA+QAKLLR LQS
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  312  GQLQRLGSDREHTVDVRLIAATNRDLAAEVRNGNYRADFYHRLSVYPLQVPPLRERGRDV  371
            G++QRLG+DR   V+VR+IAATNR L  EVR+G +RAD+YHRLSVYP+++PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  372  LLLAGYFLEQnrsrlglnslrlsnEAQSALLAYDWPGNVRELEHLIGRSALKALGQHPDR  431
            L+LAG FLE NR RLGL  LRL+ +A+ ++LAY WPGNVRELEH+I+R+ALK L+Q   R
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  432  PRILTLQASDLDLRTVAGGVQapspaplpapslaEGGLREAVDGYQRQIIDACLQRHQDN  491
              +L+++A++L+L   +    A+ PA++++ +    +L+ AVD+YQRQ+++  LQRH+++
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY--SLQAAVDSYQRQLLQDALQRHNGK  519

Query  492  WAAAARE  498
            WA+AAR 
Sbjct  520  WAGAARA  526

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  384 bits (1442),  Expect = 8e-108, Method: Compositional matrix adjust.
 Identities = 254/490 (52%), Positives = 359/490 (74%), Gaps = 18/490 (3%)

Query  38   FPCDAAALLRLEGDVLVPLAIDGLSSDTLGRRFRITEHPRFGILLGNAAPTRFAADSPLP  97
            F C A  LLRL+GD L   A  GL  + LGR F++  HPR++ +L ++ P RFAADS LP
Sbjct  70   FNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEGEPVRFAADSELP  129

Query  98   DPYDGLVDGLNDQHSGELEVHDCMGCALTVNGRAWGLMTLDALGRGRFDRVDMDSLQafa  157
            DPYDGL   L+D  +  L VHDCMG +L V+GR WG +TLDAL  G FD     S+    
Sbjct  130  DPYDGL---LQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFD----ASVARRL  182

Query  158  alaaaTVNVAERISDLaqagqqaqqraeaYRLGLEQS--QGQRELIGQSPAHRQLMQEIG  215
               A+ ++ A RI++L +  +  +      R GL ++  ++Q  ++G+SP  R L++E+ 
Sbjct  183  RECAPLIETALRIGQLENEVRGLRLA----RSGLVEPAVESQNSILGDSPVLRGLLKELK  238

Query  216  MAAPSDMTVLVAGETGTGKELVAHALHAASPRAHKPMISLNCAALPDTLVESELFGHVRG  275
            + A +++ VL+ GETG GKEL AH LHA SPRA++PM+ +NCAALP+TL ESELFGHVRG
Sbjct  239  IVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHVRG  298

Query  276  AFSGAVADRRGKFEMADGGTLFLDEVGELPLAVQAKLLRVLQSGQLQRVGSDREHRVDVR  335
            AFSGA  DR+G+FE A GGTLFLDE+GELPLA+QAKLLR LQSG++QR+G+DR  +V+VR
Sbjct  299  AFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVNVR  358

Query  336  LIAATNRDLADEVKRGHFRADFYHRLSVFPIRVPPLRERGRDVLLLAGYFLEQNrarlgl  395
            +IAATNR L +EV++G+FRAD+YHRLSV+P+++PPLRERG+DVL+LAG FLE NR RLGL
Sbjct  359  IIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRLGL  418

Query  396  sslrlsadaQRALLDYAWPGNIRELEHLIGRSALRSLATHRTRPTIltldaaalelpaps  455
              LRL+ADA+R++L YAWPGN+RELEH+I+R+AL+ L+   +R ++      ++E ++ +
Sbjct  419  RCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHAL-----LSIEAAGLG  473

Query  456  latVAAAEPSLPAESTPAQASGSLRDALERYERQLVSAALQRHGGNLAATARELGVDRAN  515
            L   + + P+  + + +++++ SL+ A++ Y+RQL+  ALQRH G+ A++AR L +D +N
Sbjct  474  LEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSN  533

Query  516  LNRLAKRLGL  525
            L +LA+RL L
Sbjct  534  LRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  383 bits (1439),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 260/493 (53%), Positives = 347/493 (71%), Gaps = 5/493 (1%)

Query  25   LVPLIEDLSSQMPETERYRRLLHTLRALFPSDATALLRLDGDTLVPLAIDGLSSDTLGRR  84
            L  L+ DL+S++P + R +RL+ +LR  F   A  LLRLDGD L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  85   FRVSEHPRFARILAREGPTRFSASSDLPDPYDGLVKGVSG-HLEVHDCLGCPLVINGRAW  143
            F+V  HPR+ARIL    P RF+A S+LPDPYDGL+++ ++  L VHDC+G  L ++GR W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  144  GLLTLDALDPARFDGIDMaslqaflslaaaTVSVAERIDTLARTSEAERQRAEVYRQASG  203
            G +TLDAL P+ FD+    S+   L   A+ +  A RI+ L     + R       +++ 
Sbjct  162  GAVTLDALRPGSFDA----SVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV  217

Query  204  PRRREMIGSSGPHNRLQEEIAIVASSDLTVLVTGETGVGKELVASEIHALSPRADKPLIS  263
              +  ++G S     L  E+ IVA ++L VL+ GETGVGKEL A  +HA SPRA +P++ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  264  LNCAALPDTLVESELFGHVRGAFSGASSDRRGKFELADGGTLFLDEVGELPLPVQAKLLR  323
            +NCAALP+TL ESELFGHVRGAFSGA+ DR+G+FE A GGTLFLDE+GELPL++QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  324  VLQNGQLQRIGSDSEHKVDVRLIAATNRDLAEEVREGRFRADFYHRLSVYPLVVPPLRER  383
             LQ+G++QR+G+D    V+VR+IAATNR L EEVR GRFRAD+YHRLSVYP+ +PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  384  GRDVLLLAGYFLEENrsrlgllslrlsADAQAALLAYRWPGNVRELEHLIGRSALKALAA  443
            G+DVL+LAG FLE NR RLGL  LRL+ADA+ ++LAY WPGNVRELEH+I+R+ALK L+ 
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  444  HRERPRILTLTAADLTLSGDtapetapaatpplpapgaDFRETVTAYERTLILDALARHN  503
               R  +L++ AA+L L   T P  A+ +++        ++ +V +Y+R L+ DAL RHN
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHN  517

Query  504  QNWASAARELGMD  516
             +WA+AAR L MD
Sbjct  518  GKWAGAARALEMD  530

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  382 bits (1436),  Expect = 3e-107, Method: Compositional matrix adjust.
 Identities = 241/518 (47%), Positives = 354/518 (69%), Gaps = 15/518 (2%)

Query  5    SSAALVQLALDLTNSLTNHDRFERLLNTVRHTVNCDAVVLLHVQGEYLKPLALQGLTKET  64
            S++ L +L  DL + L    R++RL+ ++R+  NC AVVLL+++G+ L+  A  GL  E 
Sbjct  38   STSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEV  97

Query  65   LGRRFEIAAHPRFELISSSQTPVRFAADSKLADPYDGLLL-SHEGDLPVHACMGLPLLSD  123
            LGR F++  HPR+  I     PVRFAADS L+DPYDGLL  S    LPVH CMG+ L  +
Sbjct  98   LGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQ  157

Query  124  DKLIGILTLDSMVPNVFDEIPKRTLDIIAAMSAATLNTAILLQQLELLSKHNQQVVAELT  183
            ++L G +TLD++ P  FD    R L   A++  ++L  + L +++  L      +V    
Sbjct  158  GRLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLV----  213

Query  184  HEALVKDGGELIGNSEIMVKLKREIEMVAASNFSILIEGETGVGKELVARTLHRQSSRSE  243
             E+ V     ++G+S ++  L +E+ +VA +++++L++GETGVGKEL A+ LH +S+R+ 
Sbjct  214  -EPAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRAR  272

Query  244  GPLVYVNCAALPESLIESELFGHVKGAFTGADRNRTGKFSLASGGTIFLDEIGELPLAVQ  303
             P+V VNCAALPE+L ESELFGHV+GAF+GA ++R G+F  ASGGT+FLDEIGELPLA+Q
Sbjct  273  QPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQ  332

Query  304  SKLLRALQNQEIQVVGKDDVEYVDVRILAATNRQLKVEVEQGRFRADLYHRLSVYPVIVP  363
            +KLLRALQ+ EIQ +G D    V+VRI+AATNR L  EV +GRFRADLYHRLSVYPV +P
Sbjct  333  AKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIP  392

Query  364  PLRQREGDISLLSGYFIELTRRKLGMSQLTLNASAIKMLNQYDWPGNVRELEHVISRAAL  423
            PLR+R  D+ +L+G F+EL R +LG+  L L A A + +  Y WPGNVRELEHVISRAAL
Sbjct  393  PLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAAL  452

Query  424  R--ARSESTAAIVRIGLTHLALLLSTNPQGDDSKNKAEDSALEIEVLAQGNLKQQTDDFQ  481
            +  +++ES  A++ I  + L+L ++T+P        +   +  I   +  +L+   D +Q
Sbjct  453  KVLSQAESRHALLSIEAAGLGLEVTTHPA-------PASVPAAIAGETPYSLQAAVDSYQ  505

Query  482  RQRILQTMTQYHGNWSATAKALQMDRANLNRLAKRLGI  519
            RQ + +++ + +G+W+++A+AL+MD +NL +LA+RL +
Sbjct  506  RQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  381 bits (1434),  Expect = 3e-107, Method: Compositional matrix adjust.
 Identities = 235/505 (47%), Positives = 358/505 (71%), Gaps = 18/505 (3%)

Query  14   DLNSALTRQARFDTLLTTIREILKCDASALLLYEDQHFKPLAINGLAKEVLGRRFSINQH  73
            DL S L    R++ L++++R+ ++C A  LL  ++++++  A  GL  EVLGR F +++H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  74   PRLEAIARAGDIVRFPSNSDLPDPYDGLIPN-HDDKLHVHSCIGLPLLIDDQLIGAITID  132
            PRL  I   G+ VRF+++S+LPDPYDGL+ +     L VH C+G+ L ++++L GA+T+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  133  AFDPNQFDGLLNQELRFVSalaagglhtalllEQLETQAS---LPRGSYTEKRTLS-NEI  188
            A+ P  FD+ + + LR      A  ++TAL + QLE +     L+R++  E    S N I
Sbjct  168  ALRPGSFDASVARRLR----ECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSI  223

Query  189  IGKSAGMKALQEQIDAVADTELSVLIMGETGVGKELVANAIHHRSHRANNTLVYLNCAAL  248
            +G S+ +++L  ++  VAD+EL+VL+ GETGVGKEL A+ +H  S RA + +V +NCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  249  PESVAESELFGHIKGAFTGAISNRKGKFEQADGGTLFLDEVGELSLELQAKLLRALQYGD  308
            PE++AESELFGH++GAF+GA  +R+G+FE A GGTLFLDE+GEL+L +QAKLLRALQ G+
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  309  IQRVGDDRHIRVNTRIVAATNRVLHEEVKAGRFRADLYHRLSVFPLHVPPLREREDDVVL  368
            IQR+G DR  +VN RI+AATNR L EEV+ GRFRADLYHRLSV+P+H+PPLRER +DV++
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  369  LAGFFAEQLRSKLGLNSVRLSPTLVQALKDYSWPGNVRELEHVIKRAG--VLAKA--RTQ  424
            LAG F E  R +LGL  +RL++   +++  Y+WPGNVRELEHVI RA+  VL++A  R  
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  425  SLDIELVEQDFDIKASNNQPTTEESGIPSSSFELSDAGLKQATDTFQKAMIIKALEQNQG  484
             L IE    ++++ +    ++   +    +++     +L+ A D++Q+ ++  AL++++G
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIAGETPY-----SLQAAVDSYQRQLLQDALQRHNG  518

Query  485  NWAATARQLELDNGNLHRLAKRLGI  509
            +WA++AR LE+D +NL++LA+RL +
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  381 bits (1433),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 242/506 (48%), Positives = 360/506 (72%), Gaps = 20/506 (3%)

Query  14   DLNSALTRQARFDTLLTTIRDVLNCDSSALLLFEDQHFKPLAINGLAKEVLGRRFSIEQH  73
            DL S L    R++ L++++RD +NC +  LL +++++++  A  GL  EVLGR F +E+H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  74   PRLEAIARAGDIVRFPSESTLPDPYDGLITNHQGK-LHVHSCIGLPLLIDDQLIGAITID  132
            PRL  I   G+ VRF+++S LPDPYDGL+ +  +  L VH C+G+ L ++++L GA+T+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  133  ALDPNQFDQLKNQELRFISalaagglhtalllEQLETQAS---LPRESYAEKRTLS-NEI  188
            AL P  FD    + LR      A  ++TAL + QLE +     L+R +  E    S N I
Sbjct  168  ALRPGSFDASVARRLR----ECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSI  223

Query  189  IGNSQGMRTLQEQIDAVANTELSVLVMGETGVGKELVANAIHHRSDRASNNLVYLNCAAL  248
            +G+S  +R L  ++  VA++EL+VL+ GETGVGKEL A+ +H  S RA + +V +NCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  249  PESVAESELFGHIKGAFTGAISHRKGKFEQADGGTLFLDEVGELSLELQAKLLRALQYGD  308
            PE++AESELFGH++GAF+GA  +R+G+FE A GGTLFLDE+GEL+L +QAKLLRALQ G+
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  309  IQRVGDDRHIRVNTRIVAATNRVLHEEVKAGRFRADLYHRLSVFPLHVPPLREREEDVIL  368
            IQR+G DR  +VN RI+AATNR L EEV+ GRFRADLYHRLSV+P+H+PPLRER +DV++
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  369  LAGFFAEQVRGKLGLHSVRLSPSLVAELREYHWPGNVRELEHVIKRAA--VLAKA--RTP  424
            LAG F E  R +LGL+ +RL++     +  Y WPGNVRELEHVI RAA  VL++A  R +
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  425  QMDIELISQDFDIKT-PTSPMMPTVAASQAQHEIHVDIGLKQATDAFQKQLILRALESNQ  483
             + IE  + ++++ T P+++ +P+  A+++   ++  +      D++Q+QL+  AL+ ++
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAV------DSYQRQLLQDALQRHN  517

Query  484  GNWAATARQLELDSGNLHRLAKRLGI  509
            G+WA++AR LE+D++NL++LA+RL +
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  381 bits (1432),  Expect = 5e-107, Method: Compositional matrix adjust.
 Identities = 241/506 (48%), Positives = 361/506 (72%), Gaps = 20/506 (3%)

Query  14   DLNSALTRQARFDTLLTTIRDVLNCDSSALLLFEDQHFKPLAINGLAKEVLGRRFSIEQH  73
            DL S L    R++ L++++RD +NC +  LL +++++++  A  GL  EVLGR F +E+H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  74   PRLEAIARAGDIVRFPSESTLPDPYDGLITNHQGK-LHVHSCIGLPLLIDDQLIGAITID  132
            PRL  I   G+ VRF+++S LPDPYDGL+ +  +  L VH C+G+ L ++++L GA+T+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  133  ALDPNQFDQLKNQELRFISalaagglhtalllEQLETQAS---LPRESYAEKRTLS-NEI  188
            AL P  FD    + LR      A  ++TAL + QLE +     L+R +  E    S N I
Sbjct  168  ALRPGSFDASVARRLR----ECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSI  223

Query  189  IGNSQGMRTLQDQIDAVANTELSVLVMGETGVGKELVANAIHHRSDRASNNLVYLNCAAL  248
            +G+S  +R L  ++  VA++EL+VL+ GETGVGKEL A+ +H  S RA + +V +NCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  249  PESVAESELFGHIKGAFTGAISHRKGKFEQADGGTLFLDEVGELSLELQAKLLRALQYGD  308
            PE++AESELFGH++GAF+GA  +R+G+FE A GGTLFLDE+GEL+L +QAKLLRALQ G+
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  309  IQRVGDDRHIRVNTRIVAATNRVLHEEVKAGRFRADLYHRLSVFPLHVPPLREREEDVIL  368
            IQR+G DR  +VN RI+AATNR L EEV+ GRFRADLYHRLSV+P+H+PPLRER +DV++
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  369  LAGFFAEQVRGKLGLHSVRLSPSLVAELREYHWPGNVRELEHVIKRAA--VLAKA--RTP  424
            LAG F E  R +LGL+ +RL++     +  Y WPGNVRELEHVI RAA  VL++A  R +
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  425  QMDIELISQDFDIKT-PTSPMMPTVAASQAQHEIHSDIGLKQATDAFQKKLILRALESNQ  483
             + IE  + ++++ T P+++ +P+  A+++   +++ +      D++Q++L+  AL+ ++
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAV------DSYQRQLLQDALQRHN  517

Query  484  GNWAATARQLELDSGNLHRLAKRLGI  509
            G+WA++AR LE+D++NL++LA+RL +
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  381 bits (1431),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 249/498 (50%), Positives = 363/498 (73%), Gaps = 15/498 (3%)

Query  10   LIPLVDDLSRDLPEQERYRRLLQALRVLLPCDAAALLRLEGEWLVPLSVNGLSGDTLGRR  69
            L  L+ DL+ DLP   R +RL+ +LR  + C A  LLRL+G++L   +  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  70   FRVSEHPRFQVLLASAAPTRFPADSPLPDPYDGLVQGASGD-LQVHDCLGCPLLVDDQVW  128
            F+V  HPR+  +L  + P RF+ADS LPDPYDGL+Q++++  L VHDC+G  L V++++W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  129  GLLTLDALSPGQLAPVNlaslqafaslaaaTVRVTQ-----RIERLVRRAEGEFQRAETY  183
            G +TLDAL PG + +     L+  A+L  +++R+ Q     R  RL R +  E       
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVE-------  214

Query  184  RLAAGERPHTLIGQSALFRKLLEDIALVGASALSVLISGETGVGKELVAQALHSASPRAN  243
              +A E  ++++G+S+++R LL ++ +V+ + L+VL+ GETGVGKEL A+ LH+ SPRA 
Sbjct  215  --PAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRAR  272

Query  244  RPLISLNCAALPESLVESELFGHVMGAFSGAVSDRRGKFELADGGTLLLDEVGELPLTVQ  303
            +P++ +NCAALPE+L ESELFGHV GAFSGA  DR+G+FE A GGTL+LDE+GELPL++Q
Sbjct  273  QPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQ  332

Query  304  AKLLRVLQSGQLQRLGSDREHRIDVRLITATNRDLAEEVRQGRFRADLYHRLSVFPLHVP  363
            AKLLR LQSG++QRLG+DR  +++VR+I+ATNR L EEVR+GRFRADLYHRLSV+P+H+P
Sbjct  333  AKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIP  392

Query  364  ALRERGSDVLLLTGYFLEENrsrlglhslrlsgDAEAALLAYAWPGNVRELEHLVARSAL  423
            +LRERG DVL+L+G FLE NR RLGL+ LRL++DAE ++LAYAWPGNVRELEH+++R+AL
Sbjct  393  PLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAAL  452

Query  424  KAYGQRRDGSRILTLSAEDFALQGGPPGLPRaeappapvapvGDLREAVEHFERRQIRAS  483
            K  +Q      +L++ A +++L+      P + +++ +      L+ AV+ ++R+ ++ +
Sbjct  453  KVLSQAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDA  512

Query  484  LDRHQGNWASAARELGMD  501
            L+RH+G+WA+AAR L MD
Sbjct  513  LQRHNGKWAGAARALEMD  530

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  380 bits (1430),  Expect = 7e-107, Method: Compositional matrix adjust.
 Identities = 239/512 (47%), Positives = 357/512 (70%), Gaps = 21/512 (4%)

Query  14   VDLANSLTNEDRFDRLLSAVRRAIPCDAVALLALREDMLVPLAAQGLSPDILGRRFKADE  73
             DL++ L    R++RL++++R  + C AV LL L  D L   AA GL  ++LGR F+ + 
Sbjct  47   ADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVER  106

Query  74   HPRFERLTQSRQPVRFAADCQLPDPYDGLLLATEGD-LPVHACMGFPLYSDNRLIGLLTL  132
            HPR+ R+ +  +PVRFAAD +LPDPYDGLL  + +  LPVH CMG  L  + RL G +TL
Sbjct  107  HPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTL  166

Query  133  DSLSAGVFDDISQKTLSILNALAAATLRSAELLNMLEYKASHAHEV-ALALTQEALSRDG  191
            D+L +G FD    + L    +L  ++LR ++L           +EV +L L++ +L   +
Sbjct  167  DALRPGSFDASVARRLRECAPLIETALRIGQL----------ENEVRGLRLARSGLVEPA  216

Query  192  GE----LIGESAAMAQLKREIRLVASSDFNVLVTGETGVGKELVARTLHMLSSRCNEPLV  247
             E    ++G+S+ +  L +E+++VA +++ VL+ GETGVGKEL A+ LH  S+R  +P+V
Sbjct  217  VESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  248  YVNCAAVPDALAESELFGHVRGAFTGANSDRMGKFMLADGGSLFLDEIGELSLAVQSKLL  307
             VNCAA+P++LAESELFGHVRGAF+GA  DR G+F  A GG+LFLDEIGEL+LA+Q+KLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  308  RALQSGEVQKVGRDKPEKVNVRVIAATNRDLAREVKAETFRADLYHRLSVYPIQVPPLRE  367
            RALQSGE+Q++G D+P  VNVR+IAATNR L  EV+   FRADLYHRLSVYP+++PPLRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  368  RDQDVLLLAGYFIAATRRKLGMEQIRLAPAVNEALLAYPWPGNVRELEHTISRAALRARS  427
            R++DVL+LAG F+   R +LG+  +RL++  + ++LAY+WPGNVRELEH ISRAAL+  S
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  428  EQAGKRIVTILPEHCDLSVPPSSSTILQPDRTVSAELASSHKPVNLKEETERFQRELIHR  487
            +  +++ +  + E  +L++  ++    +P  +  +   +++ P +L+   + +QR+L++ 
Sbjct  457  QAESRHALLSI-EAAGLGLEVTT----HPAPASVPAAIAGETPYSLQAAVDSYQRQLLQD  511

Query  488  TLTEAQGNWaaaaralsldraNLIRLAKRLGV  519
            +L   +G+WA+AARAL +D +NL +LA+RL +
Sbjct  512  ALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  378 bits (1421),  Expect = 4e-106, Method: Compositional matrix adjust.
 Identities = 253/499 (51%), Positives = 346/499 (70%), Gaps = 14/499 (2%)

Query  21   RYRSLLAAARGLVRCDAAALLRLDGDVLRPLAVDGLSDETLGRQFPVASHPRFARLLESE  80
            R + L+A+ R+   C A  LLRLDGD L+  A  GL  E LGR F V  HPR+AR+LE  
Sbjct  58   RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEG  117

Query  81   RGLRFAHDCGLPDPYDGLVAGQPGI-LPVHDCMGAPLRLRGATWGLLTLDALDAGTFEAV  139
              +RFA D  LPDPYDGL+ + P+  LPVHDCMG  LR++G  WG +TLDAL +G+F+A 
Sbjct  118  EPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDAS  177

Query  140  GPAQLDALVALVETGIEAAHTIQEMEARAMREQAVAQALRSGRGATRELLGSSPAMKQLC  199
             + +L    +L+ET++  ++   E E R++R  A +  + ++  +   +LG SP ++ L 
Sbjct  178  VARRLRECAPLIETALRIGQL--ENEVRGLR-LARSGLVEPAVESQNSILGDSPVLRGLL  234

Query  200  SEIDTVAVSDLTVLVLGETGVGKDLVAQRLHARSRRSDQPLVQVNCAALPETLADSELFG  259
             E+  VA ++L VL+ GETGVGK+L A++LHA S R+ QP+V+VNCAALPETLA+SELFG
Sbjct  235  KELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFG  294

Query  260  HKRGAFTGAVQDRNGKFEIADGGTLFLDEVGELPLTVQAKLLRVLQSGELQRPGSDRTLK  319
            H RGAF+GA QDR+G+FE A GGTLFLDE+GELPL++QAKLLR LQSGE+QR G+DR   
Sbjct  295  HVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKH  354

Query  320  VDVRVIAATNRDLPAAIAQGRFRADLYHRLSVYPLVVPPLRERGRDVVALAGGFLEENQH  379
            V+VR+IAATNR L   + +GRFRADLYHRLSVYP+ +PPLRERG+DV+ LAG FLE N+ 
Sbjct  355  VNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRV  414

Query  380  RLGARNLRLSPAAKAALLAHGWPGNVRELEHVISRASLRAFREQRRGARWTAIEPHHLAL  439
            RLG R LRL++ A  ++LA +WPGNVRELEHVISRA+L+ + +        +IE+  L+L
Sbjct  415  RLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGL  474

Query  440  EaaaaggpaaspappapapagqhagvaSGGATLREATEAFQRAWLADALARHRGHVANAA  499
            E           +  +++++   A  +    +L+ A +++QR  L DAL RH G  A AA
Sbjct  475  E----------VTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAA  524

Query  500  REAGIDRSNFHRTLRKLGV  518
            R   +D SN+++  R+L +
Sbjct  525  RALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  376 bits (1413),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 234/502 (47%), Positives = 356/502 (71%), Gaps = 11/502 (2%)

Query  14   DLTSGLSSKDRFERLLSTIRNALKCDASALLLFKNQYFSPLATNGLDGDVIGRRFAISQH  73
            DL S+L++  R++RL++++R+ ++C A  LL +  + +   A+ GLD +V+GR F + +H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  74   PRLEAIARAGDIVRFPSDSDLPDPYDGLIANE-ERQLQVHSCIGLPLLVNERLIGAVTID  132
            PRL  I   G+ VRF++DS+LPDPYDGL+ +     L VH C+G+ L V+ RL GAVT+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  133  AFDPTQFDSFTNKELRIIsalaatslhtallMERLenqsgensnnssfersP--DNHVEM  190
            A+ P  FD+   + LR      A  ++TAL + +LEN+        S    P  +++  +
Sbjct  168  ALRPGSFDASVARRLR----ECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSI  223

Query  191  IGESLAMQELQANINAVANTELSVLITGETGVGKELVASALHQRSTRAQQNLVYLNCAAL  250
            +G+S  ++ L  +++ VA++EL+VL+ GETGVGKEL A  LH  S RA+Q +V +NCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  251  PESVAESELFGHVKGAFTGAISNRKGKFESADNGTLFLDEIGELSLALQAKLLRVLQYGD  310
            PE++AESELFGHV+GAF+GA  +R+G+FE+A  GTLFLDEIGEL+LA+QAKLLR LQ G+
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  311  IQRIGDDNHIKVNTRIIAATNKTLSDEVKNGDFRADLYHRLSVFPIFVPPLRDRGNDVTL  370
            IQR+G D    VN RIIAATN+TL +EV++G FRADLYHRLSV+P+ +PPLR+RG+DV +
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  371  LVGYFAEKSRIKLAATSIRITPEAITLLNDYSWPGNIRELEHVISRAA--VLSRAQSDDS  428
            L G F E +R++L+   +R+T++A   +  Y+WPGN+RELEHVISRAA  VLS+A+S ++
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  429  DLVLSPTHFLIKKENHAEKNIANQIVTPHSKNTKDLRSATDEFQANLIKKTYQEQQQNWA  488
             L + ++ + +    H+        ++ ++  +  L++A D +Q +L++ + Q ++ +WA
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIAGETPYS--LQAAVDSYQRQLLQDALQRHNGKWA  521

Query  489  ATARALQLDTGNLHRLAKRLNL  510
            ++ARAL++D +NL++LA+RLNL
Sbjct  522  GAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  376 bits (1414),  Expect = 1e-105, Method: Compositional matrix adjust.
 Identities = 225/511 (45%), Positives = 362/511 (71%), Gaps = 12/511 (2%)

Query  8    LTRIALDITSGLSDHDRFSRLLDTVRQTLHCDAAALLQFTGRQFTPLAIDGLSPDVLGRR  67
            L R+  D+ S+L+   R+ RL+ ++R+ ++C A  LL++ G ++   A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FILSEHPRLEAIARAGDVVRFPADSELPDPYDGLIPH-QEDHLMVHACIGLPLVADGALI  126
            F +  HPRL  I   G+ VRF+ADSELPDPYDGL+ +     L VH C+G+ L  +G L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  127  GAVTIDGFDPEQFNDFSDKELRTlsaiasaslnnalliEKLEKQALQSQEPSSFNHSSDS  186
            GAVT+D++ P  F+    + LR  +++  ++L  + L +  E ++L+   ++  + + +S
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLEN--EVRGLRLARSGLVEPAVES  219

Query  187  EVEMIGQSPAMLAMKNELKVVASTDLNVLILGDTGTGKELVAKSIHQGSPRSSKSLVYLN  246
            +  ++G+SP + ++ +ELK+VA ++L VL+ G+TG GKEL A  +H  SPR+ +++V +N
Sbjct  220  QNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVN  279

Query  247  CAALPESVAESELFGHVKGAFTGAISHRSGKFEIADKGTLFLDEIGELPLSLQSKLLRVL  306
            CAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGELPL++Q+KLLR L
Sbjct  280  CAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRAL  339

Query  307  QYGDLQKVGSDKSLKVDVRIIAATNKDLKQEVLAGRFRADLYHRLSVFPVIVPPLKEREG  366
            Q G++Q++G+D++  V+VRIIAATN+ L +EV  GRFRADLYHRLSV+PV +PPL+ER  
Sbjct  340  QSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGH  399

Query  367  DIILLSGFFVERSRGKLGLKSLRLSPDSIKLLNSYDWPGNVRELEHVLHRAA--VLARAQ  424
            D+++L+G F+E +R +LGL+ LRL++D+ + + +Y WPGNVRELEHV+ RAA  VL++A+
Sbjct  400  DVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAE  459

Query  425  AQSNIALITPQHFDFYNQQAKNIAAVPPSIGSKSVLQSTKTEQTLKLATEAFQAQYIRQA  484
            ++  +  I +  +++        A+VP++I++ +         +L+ A +++Q Q +++A
Sbjct  460  SRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY-------SLQAAVDSYQRQLLQDA  512

Query  485  LAANGHNWAATARALDVDSGNLHRLAKRIGI  515
            L  +  +WA++ARAL++D++NL++LA+R+ +
Sbjct  513  LQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  375 bits (1409),  Expect = 3e-105, Method: Compositional matrix adjust.
 Identities = 232/500 (47%), Positives = 356/500 (72%), Gaps = 7/500 (1%)

Query  14   DLTSGLSSKDRFERLLSTIRHALKCDASALLLFKNQYFSPLATNGLDSDVIGRRFSISQH  73
            DL S+L++  R++RL++++R+ ++C A  LL +  + +   A+ GLD +V+GR F + +H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  74   PRLEAIARAGDIVRFPSDSDLPDPYDGLIANE-ERQLQVHSCIGLPLLVNERLIGAVTID  132
            PRL  I   G+ VRF++DS+LPDPYDGL+ +     L VH C+G+ L V+ RL GAVT+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  133  AFDPTQFDTFTNKELRIIsalaatslhtallMERLenqsgensnnssfegssdnHVEMIG  192
            A+ P  FD+   + LR  ++L  T+L+ + L + +       S        S  +  ++G
Sbjct  168  ALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVES--QNSILG  225

Query  193  ESLAMQELQANINAVANTELSVLITGETGVGKELVASALHQRSARSQQNLVYLNCAALPE  252
            +S  ++ L  +++ VA++EL+VL+ GETGVGKEL A  LH  S+R++Q +V +NCAALPE
Sbjct  226  DSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPE  285

Query  253  SVAESELFGHVKGAFTGAISNRKGKFESADNGTLFLDEIGELSLALQAKLLRVLQYGDIQ  312
            ++AESELFGHV+GAF+GA  +R+G+FE+A  GTLFLDEIGEL+LA+QAKLLR LQ G+IQ
Sbjct  286  TLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQ  345

Query  313  RIGDDNHIKVNTRIIAATNKTLSDEVKNGDFRADLYHRLSVFPIFVPPLRERGNDVTLLA  372
            R+G D    VN RIIAATN+TL +EV++G FRADLYHRLSV+P+ +PPLRERG+DV +LA
Sbjct  346  RLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLA  405

Query  373  GYFAEKSRIKLGATSIRITPEAITLLNEYSWPGNIRELEHVISRAA--VLSRAQNDDSDL  430
            G F E +R++LG   +R+T++A   +  Y+WPGN+RELEHVISRAA  VLS+A++ ++ L
Sbjct  406  GHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALL  465

Query  431  VLSPTHFLIKKENHAEKSITNQIVTPHSKNTKDLRSATDEFQANLIKKTYQEQQQNWAAT  490
             + ++ + +    H+  +     ++ ++  +  L++A D +Q +L++ + Q ++ +WA++
Sbjct  466  SIEAAGLGLEVTTHPAPASVPAAIAGETPYS--LQAAVDSYQRQLLQDALQRHNGKWAGA  523

Query  491  ARALQLDTGNLHRLAKRLNL  510
            ARAL++D +NL++LA+RLNL
Sbjct  524  ARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  374 bits (1404),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 229/502 (46%), Positives = 358/502 (72%), Gaps = 11/502 (2%)

Query  14   DLTSGLSNKDRFERLLSTIRNALKCDASALLLFKNQYFSPLAINGLDGDVIGRRFSISQH  73
            DL S+L+   R++RL++++R+ ++C A  LL +  + +   A  GLD +V+GR F + +H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  74   PRLEAIARAGDIVRFPPDSDLPDPYDGLIANKK-SQLHVHSCIGLPLIVNERLIGAVTID  132
            PRL  I   G+ VRF++DS+LPDPYDGL+ +   + L VH C+G+ L V+ RL GAVT+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  133  AFDPAQFDKFTNKELRIIsalaatslntallMERLEKQsges--stassfesPQHHVAEM  190
            A+ P+ FD    + LR      A  ++TAL + +LE++      + ++  E++ +    +
Sbjct  168  ALRPGSFDASVARRLR----ECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSI  223

Query  191  IGESQVMQELQNNINAVANTELSVLITGETGVGKELVASALHERSARSNQNLVYLNCAAL  250
            +G+S V++ L ++++ VA++EL+VL+ GETGVGKEL A  LH  S+R+ Q +V +NCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  251  PESVAESELFGHVKGAFTGAISNRKGKFESADNGTLFLDEIGELSLALQAKLLRVLQYGD  310
            PE++AESELFGHV+GAF+GA  +R+G+FE+A  GTLFLDEIGEL+LA+QAKLLR LQ G+
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  311  IQRIGDDNHIKVNTRIIAATNKMLHEEVKNGNFRADLYHRLSVFPIFVPPLRDRENDITI  370
            IQR+G D    VN RIIAATN+ L EEV++G FRADLYHRLSV+P+ +PPLR+R +D+ +
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  371  LVGYFAEKSRIKLGASSLRITPETIALLNDYSWPGNIRELEHVMSRAT--VLSRAQSNET  428
            L G F E +R++LG   LR+T+++   +  Y+WPGN+RELEHV+SRA+  VLS+A+S ++
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  429  DLTLTPLHFSIKKDTNLEVSPIQQTENTLIDETKGLRLATDEFQTQLIKKTHQENQHNWA  488
             L++ +  +++   T+   +++  +     +   +L+ A D +Q QL++ + Q ++ +WA
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIAG--ETPYSLQAAVDSYQRQLLQDALQRHNGKWA  521

Query  489  ATARALQLDTGNLHRLAKRLKL  510
            ++ARAL++D +NL++LA+RL+L
Sbjct  522  GAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  372 bits (1399),  Expect = 2e-104, Method: Compositional matrix adjust.
 Identities = 233/505 (47%), Positives = 367/505 (73%), Gaps = 18/505 (3%)

Query  14   DLNSALTRQARFDTLLTTIREVLKCDSSALLLYEDQHFKPLAINGLAKEVLGRRFSINEH  73
            DL S L    R++ L++++R+ ++C +  LL  ++++++  A  GL  EVLGR F ++ H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  74   PRLEAIARAGDIVRFPSDSNLPDPYDGLIPN-HDDKLHIHSCIGLPLLIDDHLIGAITID  132
            PRL  I   G+ VRF++DS+LPDPYDGL+ +     L +H C+G+ L ++++L GA+T+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  133  AFDPFQFDSLLNHELRFISalaagglhtalllEKLETQTS---LPRESFTEKRALNDD-I  188
            A+ P  FD+ + + LR      A  ++TAL + +LE +     L+R ++ E    +++ I
Sbjct  168  ALRPGSFDASVARRLR----ECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSI  223

Query  189  IGESAEMKSLQQQINAVANTELSVLVMGETGVGKELVANAIHHRSNRADKTLVYLNCAAL  248
            +G+S+ +++L ++++ VA++EL+VL+ GETGVGKEL A+ +H  S RA + +V +NCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  249  PESVAESELFGHIKGAFTGAISNRKGKFEQADGGTLFLDEVGELSLELQAKLLRALQYGD  308
            PE++AESELFGH++GAF+GA  +R+G+FE A GGTLFLDE+GEL+L +QAKLLRALQ G+
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  309  IQRVGDDRHIRVNTRIVAATNRVLHEEVTAGRFRADLYHRLSVFPIRVPPLREREEDVIL  368
            IQR+G DR  +VN RI+AATNR L EEV  GRFRADLYHRLSV+P+++PPLRER +DV++
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  369  LAGFFAEQLRSKLGLSSIRFSSDLIQALKQYSWPGNVRELEHMIKRAG--VLSKARTHSA  426
            LAG F E  R +LGL  +R+++D  +++  Y+WPGNVRELEH+I RA+  VLS+A ++ A
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  427  --DIELLVSDFDIYTSPSATSDGRNTPDISSINQPNVGLKEATDRYQKKVIEQTLNLNQG  484
               IE    ++++ T P+++S     P   + + P  +L+ A D YQ+++++++L+ ++G
Sbjct  464  LLSIEAAGLGLEVTTHPAPAS----VPAAIAGETPY-SLQAAVDSYQRQLLQDALQRHNG  518

Query  485  NWAATARQLELDSGNLHRLAKRLGI  509
            +WA++AR LE+D++NL++LA+RL +
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  371 bits (1395),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 224/505 (45%), Positives = 345/505 (69%), Gaps = 10/505 (1%)

Query  15   DLANSLTTKDRFERLLSTVRHAVECDAVVLLDVESGFLKPLAQQGLTQDALGRRFEIAAH  74
            DL++ L +  R++RL++++R+  +C AVVLL ++++ L+  A  GL  + LGR F++  H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  75   PRFEAICESSTPIRFAASSPLPDPYDGMLL-AHEGDLPVHACMGLPLMSDDNLIGVLTLD  133
            PR+  I E + P+RFAA S LPDPYDG+L  +    LPVH CMG+ L  ++ L G +TLD
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  134  SMSPNAFDDIPKRSLDIISAMSAATLKTAILLQELEHHSLHNQQVVAELTHEALVKDGGE  193
            ++ P +FD    R L   +++  ++L+ + L +E+    L    +V     E+ V     
Sbjct  168  ALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLV-----EPAVESQNS  222

Query  194  LIGDSLVMLKLKREIDMVAISDFSILIEGETGVGKELVARTLHRQSKRVEGPLVYVNCAA  253
            ++GDS V+  L +E+ +VA +++++L++GETGVGKEL A+ LH +S R   P+V VNCAA
Sbjct  223  ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAA  282

Query  254  LPESLIESELFGHVKGAFTGADRNRIGKFSLADGGTIFLDEIGELSLPVQSKLLRVLQNQ  313
            LPE+L ESELFGHV+GAF+GA ++R G+F  A GGT+FLDEIGEL+L++Q+KLLR LQ+ 
Sbjct  283  LPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSG  342

Query  314  EIQVVGKDDIERVNVRILAATNRKLKVEVEEGRFRADLYHRLSVYPISVPPLRAREGDVT  373
            EIQ +G D   +VNVRI+AATNR L  EV  GRFRADLYHRLSVYP+ +PPLR R  DV 
Sbjct  343  EIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVL  402

Query  374  LLSGYFIELTRRKLGMQQLTLTSSAIDALNRYDWPGNVRELEHVIARAALRAKGSVNSVI  433
            +L+G F+EL R +LG++ L LT+ A  ++  Y WPGNVRELEHVI+RAAL+  +  +S  
Sbjct  403  MLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRH  462

Query  434  VRIGLEHMEHLVATSSLQSASVLKGDSGPRVSEEVEANLKLATEAFQRRVITQVLAEESG  493
              +++E     +  ++  +++ + +     ++ E   +L+ A +++QR+++ + L  ++G
Sbjct  463  ALLSIEAAGLGLEVTTHPAPASVPAA----IAGETPYSLQAAVDSYQRQLLQDALQRHNG  518

Query  494  NWSATAKRLETDRANLNRLAKRLGI  518
            +W+++A+ LE D +NL +LA+RL +
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  370 bits (1391),  Expect = 8e-104, Method: Compositional matrix adjust.
 Identities = 224/508 (45%), Positives = 357/508 (71%), Gaps = 11/508 (2%)

Query  8    LTRMALDITSGLSNHDRFSRLLDTIRESMQCDAAALLEFKGQQFTPLAINGLSPDVLGRR  67
            L R+  D+ S+L+   R+ RL+ ++R+  +C A  LL + G+++   A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FVLHEHPRLEAIARAGDVVRFPADSDLPDPYDGLIPN-QGDNLTVHACIGLPLLADGSLI  126
            F ++ HPRL  I   G+ VRF+ADS+LPDPYDGL+ +  +  L VH C+G+ L  +G L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  127  GAVTIDGFDPDQFKSFTNEQLRGisaiasaslnnalliDKLEKQALQAQWDKGDSTSQSK  186
            GAVT+D++ P+ F +    +LR  +++  ++L      ++LE++    +  +++    + 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRI----GQLENEVRGLRLARSGLVEPAV  217

Query  187  EGTKEIIGQSQVMNNLKQEIAVVAPTDLNVLIMGETGTGKELIAHEIHQGSMRASQPLVY  246
            E+ + I+G+S V+  L +E+ +VA ++L VL+ GETG GKEL+AH +H  S RA QP+V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  247  LNCAALPESVAESELFGHVKGAFTGAVSNRSGKFEMADKGSLFLDEIGELPLTLQAKLLR  306
            +NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  G+LFLDEIGELPL++QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  307  VLQYGDLQRVGDDRSLKVDVRIIAATNKNLKNEVLAGRFRADLYHRLSVFPLIAPPLRER  366
             LQ G++QR+G DR+  V+VRIIAATN+ L +EV  GRFRADLYHRLSV+P+  PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  367  EQDITLLSGFFVERCRQQLGLQTLRLSPTSLAMLECYQWPGNVRELEHSIYRAAILARAQ  426
             +D+ +L+G F+E  R +LGL+ LRL++ +   +  Y WPGNVRELEH I RAA+   +Q
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  427  SSGSNGVINPEHFEFANQAPRAVQSSGKTLAPQFSG----SLKQATEAFQADYIRQTLSQ  482
            + + +++++ E   ++ +   + +++  ++++ ++G    SL+ A +++Q + ++++L +
Sbjct  458  AESRHALLSIEAAGLGLEV--TTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  483  HDNNWAATARDLEVDSGNLHRLAKRIGL  510
            H+ +WA++AR LE+D++NL++LA+R+ L
Sbjct  516  HNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  370 bits (1391),  Expect = 9e-104, Method: Compositional matrix adjust.
 Identities = 240/492 (49%), Positives = 350/492 (72%), Gaps = 11/492 (2%)

Query  26   RYRRLLQGLRALLPCDATALLRLEGQELVPVAVNGLSPDTLGRRFQVTEHPRLAELLNAK  85
            R +RL+ +LR  + C A  LLRL+G+ L   A  GL  + LGR FQV  HPRLA +L+  
Sbjct  58   RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEG  117

Query  86   GPIRFPADSPLPDPYDGLVEGIHG-HLPVHDCLGCALTVEGRPWGLLTLDALETERFSCV  144
             P+RF+ADS LPDPYDGL+++  +  LPVHDC+G +L V+GR WG +TLDAL    F   
Sbjct  118  EPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDAS  177

Query  145  EldlleafaslasasvaassriralaDQAKAAQEQVAYALENHRSVRQLIGQSKAIKQLL  204
                L   A+L  +++  +     + +   A    V  A+E++ S+   +G+S  ++ LL
Sbjct  178  VARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSI---LGDSPVLRGLL  234

Query  205  KDISLAGPSDLFVLIQGETGVGKELVARALHGASMRADKPMISINCAALPDTLVESELFG  264
            K++ + + ++L VL+QGETGVGKEL A+ LH+ S RA +PM+ +NCAALP+TL ESELFG
Sbjct  235  KELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFG  294

Query  265  HVKGAYTGSVSDRRGKFELAHTGTLFLDEVGELPLATQAKLLRVLQEGQVQRLGSDREHR  324
            HV+GA++G+  DR+G+FE A  GTLFLDE+GELPLA QAKLLR LQ G++QRLG+DR  +
Sbjct  295  HVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKH  354

Query  325  VDVRVIAATNRDLALQVRQGLMRADFYHRLSVFPLFVPPLRDRGRDVLTVSGFFLEEara  384
            V+VR+IAATNR L  +VR+G  RAD+YHRLSV+P+ +PPLR+RG+DVL ++G FLE  R 
Sbjct  355  VNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRV  414

Query  385  rhrlgglrlDASAQAALLSYDWPGNVRELEHTIGRAVIRALGEQATRPRILSLSASDLGL  444
            R  L  LRL A A+ ++L+Y WPGNVRELEH I+RA ++ L++  +R  +LS+ A++LGL
Sbjct  415  RLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGL  474

Query  445  AVHEPLSTPLQATRPPSITG----TFRGAVAAFEESLIRNALDRHNYRWAAAARELHLDR  500
             V    + P  A+ P++I+G    ++++AV +++  L+++AL+RHN +WA+AAR L++D 
Sbjct  475  EVT---THPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDP  531

Query  501  ANLARMAKRMGI  512
            +NL ++A+R+ +
Sbjct  532  SNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  369 bits (1388),  Expect = 1e-103, Method: Compositional matrix adjust.
 Identities = 252/509 (50%), Positives = 352/509 (70%), Gaps = 16/509 (3%)

Query  13   ASAATEGPRYRSLLAAARGLVRCDAAALLRLDGDVLRPLAVDGLSDETMGRLFPVASHPR  72
            +S    + R + L+A+ R+   C A  LLRLDGD L+  A  GL  E +GR F V  HPR
Sbjct  50   PSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPR  109

Query  73   FARLLESERGLRFAQDCGLPDPYDGLVAGQPGI-LPVHDCMGAPLRLRGAVWGLLTLDAL  131
            +AR+LE    +RFA D  LPDPYDGL+ + P+  LPVHDCMG  LR++G +WG +TLDAL
Sbjct  110  LARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDAL  169

Query  132  EAGTFEAVGPAQLDALVALVETGIEAAHTIQEMEARAMREQAVAQALRSGGGAARELLGS  191
             +G+F+A  + +L    +L+ET++  ++   E E R++R  A +  + ++  +   +LG 
Sbjct  170  RPGSFDASVARRLRECAPLIETALRIGQL--ENEVRGLR-LARSGLVEPAVESQNSILGD  226

Query  192  SPAMKQLCSEIDTVAVSDLTVLVLGETGVGKDLVAQRLHARSRRSDEPLVQVNCAALPEA  251
            SP ++ L  E+  VA ++L VL+ GETGVGK+L A++LHA S R+ +P+V+VNCAALPE+
Sbjct  227  SPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPET  286

Query  252  LADSELFGHKRGAFTGAVQDRSGKFEIADGGTLFLDEVGELPLTVQAKLLRVLQSGEVQR  311
            LA+SELFGH RGAF+GA QDR G+FE A GGTLFLDE+GELPL++QAKLLR LQSGE+QR
Sbjct  287  LAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQR  346

Query  312  PGSDRMLKVDVRVIAATNRDLPAAIAQGRFRADLYHRLSVYPLVVPPLRERGRDVVALAG  371
             G+DR   V+VR+IAATNR L   + +GRFRADLYHRLSVYP+ +PPLRERG+DV+ LAG
Sbjct  347  LGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAG  406

Query  372  GFLEENQHRLGARNLRLSPASKAALLAHGWPGNVRELEHVISRASLRAFREQRRGARWTA  431
             FLE N+ RLG R LRL++ +  ++LA +WPGNVRELEHVISRA+L+ + +         
Sbjct  407  HFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQA--------  458

Query  432  IEPHHlaldaaaagssatlpsmppapapagsqaslagagggTLREATEAFQRAWLAEALA  491
             E++H      +  +++    +   PAPA+  A++AG    +L+ A +++QR  L +AL 
Sbjct  459  -ESRH---ALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQ  514

Query  492  RHRGHVANAAREAGIDRSNFHRTLRKLGV  520
            RH G  A AAR   +D SN+++  R+L +
Sbjct  515  RHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  369 bits (1387),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 245/510 (49%), Positives = 350/510 (69%), Gaps = 19/510 (3%)

Query  15   VGLSTSMPGELQFQRLVQAICDVLPCDAVALMQLNEGELVPVAAMGLAPELIGQRFLPAE  74
             +L++ +P+ +++QRLV ++ D + C AV L++L+ + L   AA+GL  E++G+ F    
Sbjct  47   ADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVER  106

Query  75   HPRLQAILQEREPVRFPADAELPDPFDGWLAVDRERTADVHSCMGCSLYVDRQLVGVLTL  134
            HPRL  IL+E EPVRF+AD+ELPDP+DG L         VH CMG +L V+ +L G +TL
Sbjct  107  HPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTL  166

Query  135  DALAPGRFDDVDDMTV---aafaalaaatlrnvalIRALEHGRAQQQELAQELVRDARRR  191
            DAL PG FD      +   A++   A    +    +R+L  +R+        LV  A   
Sbjct  167  DALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARS-------GLVEPAVES  219

Query  192  EGELIGNSPLMRKLREEIDMVASTDLAVLITGETGTGKELVARTLHARSRRSEQALVHVN  251
            +  ++G+SP++R L  E+ +VA ++L+VL+ GETG GKEL A+ LHA S R+ Q++VHVN
Sbjct  220  QNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVN  279

Query  252  CAALPEQIAESELFGHVKGAFTGATSNRAGKFELADGGTLFLDEIGELPLSLQAKLLRAL  311
            CAALPE +AESELFGHV+GAF+GAT +R G+FE A GGTLFLDEIGELPL++QAKLLRAL
Sbjct  280  CAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRAL  339

Query  312  QQGEIQRVGSDKLLRVNVRLIAATNRDLEQEVADGRFRSDLYHRLKVYPIAVPPLREHIA  371
            Q GEIQR+G+D+  +VNVR+IAATNR L +EV  GRFR+DLYHRL VYP+ +PPLRE+  
Sbjct  340  QSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGH  399

Query  372  DLDTLSSYFLDQARTRLGLRQIGLHPQALLAMQAYDWPGNVRELEHLLMRASLKATRHKE  431
            D+  L++ FL+  R RLGLR + L ++A  ++ AY WPGNVRELEH++ RA+LK   + E
Sbjct  400  DVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAE  459

Query  432  GRPLIL---AEHLDLPVPVQQLTESVAAEESSTPVIALSAEQGLRDAVDSYQKELILQSL  488
            +R  +L   A  L+L V  +    SV+A  ++    +L A      AVDSYQ++L+ ++L
Sbjct  460  SRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQA------AVDSYQRQLLQDAL  513

Query  489  EANQGNWSATARQLKTDRANLNRLAQRLGI  518
            + ++G+W+++AR L  D +NL +LA+RL +
Sbjct  514  QRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  369 bits (1386),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 229/503 (46%), Positives = 354/503 (71%), Gaps = 9/503 (1%)

Query  15   DLANSINNDDRFDRLLASIRKAIKCDAVALLGLHENLLTPLAIQGLSSEVLGRRFFLSEH  74
            DL++ +    R++RL+AS+R  ++C AV LL L+ + L   A  GL  EVLGR F +  H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  75   PRLQQLCNASKPLIFPDNCDLPDPYDGLLL-ARTGDLPVHSCMGLPLYSDQKVIGLVTID  133
            PRL ++ + + P+ F+ + +LPDPYDGLL  + +  LPVH CMG+ L  + ++ G VT+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  134  SLQAGSFNTISSKTLEliaalsaatlktalEFKKLEISAQHAQQLVQELTQEALLKDGGE  193
            +L++GSF++  ++ L   A+L  ++L+    + +LE +  ++ +L +    E+ +     
Sbjct  168  ALRPGSFDASVARRLRECAPLIETALR----IGQLE-NEVRGLRLARSGLVEPAVESQNS  222

Query  194  LIGQSTAMQTLKNEIQLVAGSDYTVLITGETGVGKELVARTVHQLSLRKDQPLVHINCAS  253
            ++G+S  ++ L +E+++VA+++  VL+ GETGVGKEL A+ +H  S R  QP+VH+NCA+
Sbjct  223  ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAA  282

Query  254  LPETLAESELFGHTKGAFTGADRERAGKFQLAHRGSLFLDEVGELPLAVQSKLLRVLQSG  313
            LPETLAESELFGH +GAF+GA ++R G+F+ A  G+LFLDE+GELPLA+Q+KLLR LQSG
Sbjct  283  LPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSG  342

Query  314  EIQPVGKDNVEQVDVRVIAATNRNLEEEVRQGRFRADLYHRLSVYPIKVPPLKDREQDVL  373
            EIQ +G D   +V+VR+IAATNR L EEVR+GRFRADLYHRLSVYP+ +PPL++R +DVL
Sbjct  343  EIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVL  402

Query  374  LLAGYFLEKTSRKLGIRQLRLTQDAELALRSYSWPGNVRELEHVISRASLKANAKPTAT-  432
            +LAG FLE    +LG+R LRLT DAE ++ +Y+WPGNVRELEHVISRA+LK  +++ +  
Sbjct  403  MLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRH  462

Query  433  GIISLNREFLELPANQKADNLNAKTEQYSLIDNDFDLKTATNEFQKHCILTAVTQVDGNW  492
            +++S++   L L     +   +  +   +  +  + L++A + +Q++ +  A+ + +G+W
Sbjct  463  ALLSIEAAGLGLEVTTHPAPASVPAAIAG--ETPYSLQAAVDSYQRQLLQDALQRHNGKW  520

Query  493  SEAARALKTDRANLVRMAKRLGI  515
            + AARAL  D +NL ++A+RL +
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  368 bits (1383),  Expect = 4e-103, Method: Compositional matrix adjust.
 Identities = 227/513 (45%), Positives = 361/513 (71%), Gaps = 15/513 (2%)

Query  15   LTRIALDITSGLSNRDRFSRLLDIIRQNLNCDaaallaFQGQQFTPLAINGLNEDVLGRR  74
            L R+  D+ S+L+   R+ RL+  +R+++NC A  LL ++G+++   A  GL+ +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  75   FLVEEHPRLEAIARAGDIVRFPSDSELPDPYDGLIPN-QGDELKVHACIGLPLYANERLI  133
            F VE HPRL  I   G+ VRF++DSELPDPYDGL+ +  +  L VH C+G+ L  + RL 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  134  GAITIDGFDPQQFDRFTNSELRNLSAIASVSLNNALMIDKLEKLALESQNSDSVMNVSMT  193
            GA+T+D++ P  FD      LR+ +++   +L  + + + +  L L      ++++ ++ 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRL---ARSGLVEPAVE  218

Query  194  DDVEMIGQSANMQALTHEINVVASTDLNVLILGETGTGKELVAKAVHLGSERKKSSLVYL  253
             +  ++G+S+ +++L  E+++VA ++L VL+ GETG GKEL A  +H  S R + ++V +
Sbjct  219  SQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHV  278

Query  254  NCAALPESIAESELFGHVKGAFTGAISHRSGKFELADKGTLFLDEIGELPLNLQAKLLRV  313
            NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGELPL +QAKLLR 
Sbjct  279  NCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRA  338

Query  314  LQYGDLQKIGDDRSRKVDVRIIAATNKDLKQEILAGNFRADLYHRLSVFPLLVPALRDRG  373
            LQ G++Q++G DR++ V+VRIIAATN+ L +E+  G FRADLYHRLSV+P+ +P+LR+RG
Sbjct  339  LQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERG  398

Query  374  EDISLLSGYFVERCRQKLGITSLTLTPASLHLLKQYQWPGNVRELEHALHRAA--VLAKA  431
            +D+ +L+G F+E  R +LG+  L LT+ + + +  Y WPGNVRELEH + RAA  VL++A
Sbjct  399  HDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQA  458

Query  432  QTSDGLTKIHPQHFDIVESNSLPQPPSLLGKNNKFSPDETGEAT-SLKRATDEFQANFIL  490
            ++ ++L  I++  +++ E  + P P+S+       ++  +GE+  SL+ A D +Q +++ 
Sbjct  459  ESRHALLSIEAAGLGL-EVTTHPAPASV-------PAAIAGETPYSLQAAVDSYQRQLLQ  510

Query  491  HTLNGHNGQWAATARALKVDPGNLHRLAKRLEI  523
            ++L+ HNG+WA++ARAL +DP+NL++LA+RL++
Sbjct  511  DALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  368 bits (1382),  Expect = 5e-103, Method: Compositional matrix adjust.
 Identities = 227/509 (45%), Positives = 357/509 (71%), Gaps = 12/509 (2%)

Query  8    LTRIALDITAGLSDHDRFSRLLDTIRQTLHCDAAALLQFTGQQFNPLAIDGLSPDVLGRR  67
            L R+  D+ ++L+   R+ RL+ ++R+ ++C A  LL++ G++++  A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FILSEHPRLEAIARAGDIVRFPADSELPDPYDGLIPH-QGDHLVVHACIGLPLLANGDLI  126
            F +  HPRL  I   G+ VRF+ADSELPDPYDGL+ +  +  L VH C+G+ L  +G L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  127  GAVTIDGFDPQQFNAFSDNELRTlsaiaaaslsnalMIDKLEKQAVQSQEVTTVTRINT-  185
            GAVT+D++ P  F+A     LR  +++  ++L     I++LE++ V++  ++    ++  
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETAL----RIGQLENE-VRGLRLARSGLVEPA  216

Query  186  -DAPVEMIGQSTAMNALKNELNVVASTDLNVLILGETGTGKELVAQSIHQLSNRAKQALV  244
             ++   ++G+S  + +L +EL++VA ++L VL+ GETG GKEL A+ +H  S RA+Q++V
Sbjct  217  VESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  245  YLNCAALPESVAESELFGHVKGAFTGAISHRSGKFEKADNGTLFLDEIGELPLGLQAKLL  304
             +NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGELPL++QAKLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  305  RVLQYGDLQKVGSDKSLKVDVRIIAATNKDLKQEVLAGRFRADLYHRLSVFPIMVPPLRE  364
            R LQ G++Q++G+D++  V+VRIIAATN+ L +EV  GRFRADLYHRLSV+P+ +PPLRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  365  RDGDITLLSGFFVERCRQKLTLKSLRLDSQSLALLNGYDWPGNIRELEHVLHRAA--VLS  422
            R+ D+ +L+G F+E  R +L L+ LRL +++   + +Y WPGN+RELEHV+ RAA  VLS
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  423  RAQSTSDSYLIAPQHFDFQAEAPQSIVSKPKSGAKALPSNQTLKQATATFQSQYIQQVLT  482
            +A+S      I +  ++++  +  +  S P + A   P   +L+ A  ++Q Q +Q+ L 
Sbjct  457  QAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY--SLQAAVDSYQRQLLQDALQ  514

Query  483  ENQGNWAATARALALDSGNLHRLAKRIGI  511
             ++G+WA++ARAL +D++NL++LA+R+ +
Sbjct  515  RHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  367 bits (1380),  Expect = 7e-103, Method: Compositional matrix adjust.
 Identities = 261/507 (52%), Positives = 357/507 (71%), Gaps = 6/507 (1%)

Query  25   LTPLIRDLSRDLPEseryrrllsslralFPGDAAALLRLEGDTLVPLAIDGLSSDTLGRR  84
            L  L+ DL+ DLP + R +RL++SLR  F   A  LLRL+GD L   A  GL  + LGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  85   FRVGDHPRFEQLLSRPEPTRFAADSDLPDPYDGLVQ-GVAGHLEVHDCLGCPLFVRGRPW  143
            F+V  HPR+ ++L   EP RFAADS+LPDPYDGL+Q + A  L VHDC+G  L V+GR W
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  144  GLLTLDALDPARFDSIDMASLRAFLGLAAATVSVVERIDTLarsteeeraraeayrqass  203
            G +TLDAL P+ FD+     LR    L  +++    RI+ L       R    +  +++ 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETAL----RIGQLENEVRGLRLARSGLVEPAV  217

Query  204  qsrreMVGSSDAHTHLMKEIEVVAGSDLTVLITGETGVGKELVANAIHALSSRANKPLIS  263
            +S+  ++G S     L+KE+ +VA+++L VL+ GETGVGKEL A+ +HA S+RA +P++ 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  264  LNCAALPDTLVESELFGHVRGAFSGASSDRRGKFELADGGTIFLDEVGELPLLVQAKLLR  323
            +NCAALP+TL ESELFGHVRGAFSGA+ DR+G+FE A GGT+FLDE+GELPL +QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  324  VLQNGQLQRIGSDHEHKVDVRLIAATNRDLAEEVRAGRFRADFYHRLSVYPLRVPPLRER  383
             LQ+G++QR+G+D+   V+VR+IAATNR L EEVR GRFRAD+YHRLSVYP+++PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  384  GRDVLLLAGFFLEENrsrlgllslrlAADAQAMLLRYPWPGNVRELEHLIGRSALKALAT  443
            G+DVL+LAG FLE NR RLGL  LRL+ADA+  +L Y+WPGNVRELEH+I+R+ALK L+ 
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  444  NRERRRIltltaadfalaaaPEEDRaqntqaettetaSKDFRSAVTEFERNMVVDALARH  503
              E R+ L    A         +  + +  A  +  ++  +++AV  ++R+++ DAL RH
Sbjct  458  A-ESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRH  516

Query  504  NQNWAAVARELGLDRANLNRLAKRLGL  530
            N +WA+ AR L +D +NL +LA+RL L
Sbjct  517  NGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  366 bits (1374),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 239/506 (48%), Positives = 348/506 (69%), Gaps = 7/506 (1%)

Query  4    SVNVLAKIAIELQTGIGHQDRFQRLISTLRDVLECDASALLRYEGRQFIPLAIDGLAQDV  63
            S + L ++  +L +++    R+QRL+++LRD ++C A  LLR +G ++   A  GL  +V
Sbjct  38   STSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEV  97

Query  64   LGRRFTLEGHPRLETIARAGDVVRFPADSDLPDPYDGLI--PGQESLKVHACIGLPLFAG  121
            LGR F +E HPRL  I   G+ VRF+ADS+LPDPYDGL+  +   +L VH C+G+ L   
Sbjct  98   LGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQ  157

Query  122  QNLIGALTLDGMSPDQFDTFSDEELRliaalasgalnnalliEQLESQNILPGSPAAFEQ  181
              L GA+TLD++ P+ FD+     LR  A+L   AL  + L +++ +  +  ++      
Sbjct  158  GRLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV  217

Query  182  VTHTEMIGLSPGMMQLKKEIDIVAASDLNVLIFGETGTGKELVAKSIHEASPRAVNPLVY  241
             ++  ++G SP +  L KE+ IVA ++L VL+ GETG GKEL A  +H  SPRA +P+V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  242  LNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLSLQAKLLR  301
            +NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+L++QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  302  VLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGNFRADLFHRLSVFPLSVPALRER  361
             LQ G+IQR+G DR+ +V+VR++AATNR L EEV  G FRADL+HRLSV+P+ +P+LRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  362  GEDVVLLAGYFCEQCRLRMGLSRVVLSPGARTHLLSYGWPGNVRELEHAIHRAV--VLAR  419
            G+DV++LAG F E  R+R+GL  + L+++A   +L+Y+WPGNVRELEH I RA   VL++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  420  ATRSGDEVVIHARHFALHDETTPV---VTQDIPEISHENLREATEEFQRQMITRALEQNN  476
            A      + I+A  ++L+  T P    V   I+  +  +L+ A + +QRQ++  AL+++N
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHN  517

Query  477  RSWAACARALETDVANLHRLAKRLGL  502
              WA+ ARALE D +NL++LA+RL L
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  366 bits (1374),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 236/502 (48%), Positives = 351/502 (70%), Gaps = 7/502 (1%)

Query  8    LAKIAIELQTGIGHQDRFQRLISTLRHVLACDASALLRYEGRQFIPLAIDGLAKDVLGRR  67
            L ++  +L +++    R+QRL+++LR+ + C A  LLR +G ++   A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FTLEGHPRLETIARAGDVVRFPADSDLPDPYDGLI--PGQESLKVHACIGLPLFAGQHLI  125
            F +E HPRL  I   G+ VRF+ADS+LPDPYDGL+  +   +L VH C+G+ L    +L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GALTLDGMSPDQFDTFSDEELRliaalasgalnnalliEQLESQNILPGSPSAFEPVAHT  185
            GA+TLD++ P+ FD+     LR  A+L   AL  + L +++ +  +  ++       ++ 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  186  EMIGLSPGIAQLKKEIEIVAASDLNVLIFGETGTGKELVAKSIHEASPRAANPLVYLNCA  245
             ++G SP +  L KE+ IVA ++L VL+ GETG GKEL A  +H  SPRA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  246  ALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLSLQAKLLRVLQY  305
            ALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+L++QAKLLR LQ 
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  306  GDIQRVGDDRSLRVDVRVLAATNRDLREAVLAGHFRADLFHRLSVFPLTVPPLRERGEDV  365
            G+IQR+G DR+ +V+VR++AATNR L E V  G+FRADL+HRLSV+P+ +PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  366  VLLAGYFCEQYRLRMGLSRVVLSPGARAHLLSYGWPGNVRELEHAIHRAV--VLARATRA  423
            ++LAG F E  R+R+GL  + L+++A   +L+Y+WPGNVRELEH I RA   VL++A   
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  424  GDEVVIHARHFALH---DDAVQAVAQRVPENANENLREATEAFQRQMITRALEQNNRSWA  480
               + I+A  ++L+   + A  +V+  ++ ++  +L+ A +++QRQ++  AL+++N  WA
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWA  521

Query  481  ACARALEMDVANLHRLAKRLGL  502
            + ARALEMD +NL++LA+RL L
Sbjct  522  GAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  365 bits (1373),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 229/506 (46%), Positives = 350/506 (70%), Gaps = 12/506 (2%)

Query  18   GLASGLNDQDRFNRLLDAIRKTIQCDCVMLLSRQGDLLIPLAMQGLTRDTLGRRFLIDEH  77
            +L+S+L    R++RL+ ++R  ++C  V+LL  +GD L   A  GL  + LGR F ++ H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  78   PRFSEICHADGPVIFDANSSLPDPFDGLLMDHDGD-LPMHSCMGLPLLFGDKLLGILTLD  136
            PR++ I + + PV F A+S LPDP+DGLL D  +  LP+H CMG+ L   ++L G +TLD
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  137  SLNPNMFEHIPKRSLEALSAIAASTLKMALTFSQLEAQAKQSQQRLEELNEEAWDREGGE  196
            +L P  F+    R L   +++  ++L+++    QLE + +  +     L E A + + + 
Sbjct  168  ALRPGSFDASVARRLRECAPLIETALRIG----QLENEVRGLRLARSGLVEPAVESQNS-  222

Query  197  IIGSSASMLAMKADLEVVAPSNFNILIHGETGVGKELVARTLHQLSARKRQPLIYVNCAA  256
            I+G S+ + ++  +L +VA +++ +L++GETGVGKEL A+ LH  S+R RQP++ VNCAA
Sbjct  223  ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAA  282

Query  257  IPENLVESELFGHVKGAFTGAERHRLGKFALADGGTLFLDEIGELPLAAQSKILRALQNN  316
            +PE L ESELFGHV+GAF+GA ++R G+F  A GGTLFLDEIGELPLA Q+K+LRALQ+ 
Sbjct  283  LPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSG  342

Query  317  EIQPVGQDHVQTIDVRILAATNRDLKQEVEAGRFRADLYHRLSVYPVHIPPLRERNGDVT  376
            EIQ +G D+ + ++VRI+AATNR L +EV  GRFRADLYHRLSVYPVHIPPLRER  DV 
Sbjct  343  EIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVL  402

Query  377  LLAGYFLEQARRKLGITQLKIDPNALAGLLNYSWPGNVRELEHVINRAALKARAR-QGLQ  435
            +LAG FLE  R +LG+  L++ ++A   +L Y+WPGNVRELEHVI+RAALK  ++ ++ +
Sbjct  403  MLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRH  462

Query  436  ALITVNSYDIGELDFSLPLVNTQSTLSDKEVTAKVWQRGLREATDEYQRKLISEALTQSD  495
            AL+++++   + L++ +    + ++++           +L+ A D YQR+L+ +AL + +
Sbjct  463  ALLSIEA---AGLGLEVTTHPAPASVPAAIAGETPY--SLQAAVDSYQRQLLQDALQRHN  517

Query  496  FNWAKAGRLLQVDRANLTRLSKRLGI  521
             +WA A+R L++D +NL +L++RL +
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  365 bits (1373),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 229/506 (46%), Positives = 350/506 (70%), Gaps = 12/506 (2%)

Query  18   GLASGLNDQDRFNRLLDAIRKTIQCDCVMLLSRQGDLLIPLAMQGLTRDTLGRRFLIDEH  77
            +L+S+L    R++RL+ ++R  ++C  V+LL  +GD L   A  GL  + LGR F ++ H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  78   PRFSEICHADGPVIFDANSSLPDPFDGLLMDHDGD-LPMHSCMGLPLLFGDKLLGILTLD  136
            PR++ I + + PV F A+S LPDP+DGLL D  +  LP+H CMG+ L   ++L G +TLD
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  137  SLNPNMFEHIPKRSLEALSAIAASTLKMALTFSQLEAQAKQSQQRLEELNEEAWDREGGE  196
            +L P  F+    R L   +++  ++L+++    QLE + +  +     L E A + + + 
Sbjct  168  ALRPGSFDASVARRLRECAPLIETALRIG----QLENEVRGLRLARSGLVEPAVESQNS-  222

Query  197  IIGSSASMLAMKADLEVVAPSNFNILIHGETGVGKELVARTLHQLSARKRQPLIYVNCAA  256
            I+G S+ + ++  +L +VA +++ +L++GETGVGKEL A+ LH  S+R RQP++ VNCAA
Sbjct  223  ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAA  282

Query  257  IPENLVESELFGHVKGAFTGAERHRLGKFALADGGTLFLDEIGELPLAAQSKILRALQNN  316
            +PE L ESELFGHV+GAF+GA ++R G+F  A GGTLFLDEIGELPLA Q+K+LRALQ+ 
Sbjct  283  LPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSG  342

Query  317  EIQPVGQDHVQTIDVRILAATNRDLKQEVEAGRFRADLYHRLSVYPVHIPPLRERNGDVT  376
            EIQ +G D+ + ++VRI+AATNR L +EV  GRFRADLYHRLSVYPVHIPPLRER  DV 
Sbjct  343  EIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVL  402

Query  377  LLAGYFLEQARRKLGITQLKIDPNALAGLLNYSWPGNVRELEHVINRAALKARAR-QGLQ  435
            +LAG FLE  R +LG+  L++ ++A   +L Y+WPGNVRELEHVI+RAALK  ++ ++ +
Sbjct  403  MLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRH  462

Query  436  ALITVNSYDIGELDFSLPLVNTQSTLSDKEVTAKVWQRGLREATDEYQRKLISEALTQSD  495
            AL+++++   + L++ +    + ++++           +L+ A D YQR+L+ +AL + +
Sbjct  463  ALLSIEA---AGLGLEVTTHPAPASVPAAIAGETPY--SLQAAVDSYQRQLLQDALQRHN  517

Query  496  FNWAKAGRLLQVDRANLTRLSKRLGI  521
             +WA A+R L++D +NL +L++RL +
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  365 bits (1373),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 229/519 (45%), Positives = 352/519 (68%), Gaps = 18/519 (3%)

Query  5    SASTLMEMTIGLASGVNDQDRFNRLIDAIRKTITCDCVALLSLQGDTLVPIAMQGLSRDT  64
            S+S L  +  +L+S++    R++RL+ ++R  + C  V LL L+GD L   A  GL  + 
Sbjct  38   STSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEV  97

Query  65   FGRRFIISEHPRFDAICASRSPVRFDADSSLPDPFDGLLIDHDGD-LPMHACMGLPLLFG  123
            +GR F +  HPR+  I     PVRF ADS LPDP+DGLL D  +  LP+H CMG+ L   
Sbjct  98   LGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQ  157

Query  124  DKLLGVLTLDSLKPDVFANIPARNLEVLAAIAASTMQMAMTFSQLEHQAKQ---SKQLLE  180
            ++L G +TLD+L+P+ F    AR L       A+ ++ A+ ++QLE++ +    ++  L 
Sbjct  158  GRLWGAVTLDALRPGSFDASVARRLRE----CAPLIETALRIGQLENEVRGLRLARSGLV  213

Query  181  ELNVEAWERDGGELIGNSDTMVALKNDIAVVAPSEFNILIHGDTGVGKELVARTLHHQSQ  240
            E  VE+       ++G+S  + +L +++ +VA +E+ +L++G+TGVGKEL A+ LH +S 
Sbjct  214  EPAVES----QNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSP  269

Query  241  RKRNPLVYVNCAAIPENLVESELFGHVRGAFTGADKNRLGKFALADGGTLFLDEIGELPL  300
            R R+P+V VNCAA+PE L ESELFGHVRGAF+GA ++R G+F  A GGTLFLDEIGELPL
Sbjct  270  RARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPL  329

Query  301  AAQSKLLRALQNNEIQPVGQDNIQTIDVRVLAATNRDLKQEVEDGRFRADLYHRLSVYPI  360
            A Q+KLLRALQ+ EIQ +G D  + ++VR++AATNR L +EV  GRFRADLYHRLSVYP+
Sbjct  330  AIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPV  389

Query  361  AVPALKDRGDDISLLAGFFLEQARRKLGINQVKFRSDVLVFLNRYGWPGNVRELEHVISR  420
             +P+L++RG+D+ +LAG FLE  R +LG+  +++ +D    +  Y+WPGNVRELEHVISR
Sbjct  390  HIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISR  449

Query  421  SALKALARSTNKN-LVTITKEDCGPLDQDQPIATTQVKNTPLSTPTIDLSAGLRGATDDF  479
            +ALK L+++ +++ L++I   + + L+ +  ++T     +  ++ + + + +L++A D +
Sbjct  450  AALKVLSQAESRHALLSI---EAAGLGLE--VTTHPAPASVPAAIAGETPYSLQAAVDSY  504

Query  480  QRSIITEVLEDANFNWAQAGRVLKTDRANLTRLSKRLGL  518
            QR ++ + L+  N +WA A+R L  D +NL +L++RL L
Sbjct  505  QRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  365 bits (1370),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 241/502 (49%), Positives = 350/502 (70%), Gaps = 7/502 (1%)

Query  34   LARIAIELQTGIGHQDRFQRLISTLRHVLDCDASALLRYEGRQFIPLAIDGLAHDVLGRR  93
            L R+  +L +++    R+QRL+++LR+ ++C A  LLR +G ++   A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  94   FTLEGHPRLETIARAGDVVRFPADSDLPDPYDGLI--PGQESLKVHACIGLPLFAGQNLI  151
            F +E HPRL  I   G+ VRF+ADS+LPDPYDGL+  +   +L VH C+G+ L     L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  152  GALTLDGLEPDQFDTFSDEELRliaalasgalnnalliEQLESQNIMPGSPVAFEHVAHT  211
            GA+TLD+L P+ FD+     LR  A+L   AL  + L +++ +  +  ++ V     ++ 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  212  EMIGLSPGMMQLKKEIEIVAASDLNVLIGGETGTGKELVAKSIHEASPRAVNPLVYLNCA  271
             ++G SP +  L KE+ IVA ++L VL+ GETG GKEL A  +H  SPRA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  272  ALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQY  331
            ALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+LA+QAKLLR LQ 
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  332  GDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGNFRADLFHRLSVFPLSVPPLRERGEDV  391
            G+IQR+G DR+ +V+VR++AATNR L EEV  G FRADL+HRLSV+P+ +PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  392  VLLAGFFCEQCRLKMGLSRVVLSPGARSHLLSYGWPGNVRELEHAIHravvlaraarlGD  451
            ++LAG F E  R+++GL  + L+++A   +L+Y+WPGNVRELEH I RA +   +   + 
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  452  DVV--IHARHFALHDEAAPAVAQELPAIANE---NLREATEAFQRQMITRALDQNGRSWA  506
            + +  I+A  ++L+  + PA A   +AIA E   +L+ A +++QRQ++  AL+++   WA
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWA  521

Query  507  ACARALEMDVANLHRLAKRLGL  528
            + ARALEMD +NL++LA+RL L
Sbjct  522  GAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  364 bits (1367),  Expect = 6e-102, Method: Compositional matrix adjust.
 Identities = 231/505 (46%), Positives = 354/505 (71%), Gaps = 7/505 (1%)

Query  8    FAHIAIELQQGLSTRDRFQRLLNSLRQLLCCDAAALLSYESQLLRPLATDGLAPDVLGRR  67
            + ++  +L  +L++  R+QRL+ SLR+ + C A  LL  +++ L+  A+ GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FRLSEHPRLEAIARAGDVVRFPADSQLPDPYDGLIPGQEA--LKVHACVGLPLFAHHSLI  125
            F++  HPRL  I   G+ VRF+ADS+LPDPYDGL+ +  A  L VH C+G+ L  +  L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GVLTIDGMDPHQFDHFSDEELRLIGAMASVALSNALLMEQLERQTVAPLPDVAPMAEANA  185
            G +T+D++ P  FD      LR  +++   AL  + L +++    +A    V P  E++ 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQ-  220

Query  186  DEMVGLSAPMQQLKKEVAIVADSDLNVLIMGETGVGKELVARAIHQGSRRADRPLVYLNC  245
            + ++G S+ ++ L KE+ IVAD++L VL+ GETGVGKEL A+ +H  S RA +P+V +NC
Sbjct  221  NSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNC  280

Query  246  AALPESVAESELFGHVKGAFTGAIHHRTGKFELADNGTLFLDEIGELSLTLQAKLLRVLQ  305
            AALPE++AESELFGHV+GAF+GA ++R G+FE A  GTLFLDEIGEL+L++QAKLLR LQ
Sbjct  281  AALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQ  340

Query  306  YGDLQRVGDDSSLKVNVRVLAATNRDLKQSVQEGTFRADLFHRLSVFPLSVPPLRARGQD  365
             G++QR+G D +  VNVR++AATNR L + V+ G FRADL+HRLSV+P+ +PPLR RG+D
Sbjct  341  SGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHD  400

Query  366  IALLAGFFCERSRARLGLQRLSLSPQATQLLVRYPWPGNVRELEHVIYRAT--IVARAGG  423
            + +LAG F E +R RLGL+ L L+++A + ++ Y+WPGNVRELEHVI RA+  ++++A +
Sbjct  401  VLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAES  460

Query  424  TSGDLVLRPEHLNLDGVLPDEPHPANAENTAPSWRGVSLRDATEHYQRQVISDTLARHQG  483
              + L + +  L L+  +  +P PA+   + ++    SL+ A + YQRQ++ D+L RH+G
Sbjct  461  RHALLSIEAAGLGLE--VTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNG  518

Query  484  NWSSCARELAVDSGNLHRMAKRLGI  508
            +W++ AR L +D++NL+++A+RL +
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  364 bits (1366),  Expect = 7e-102, Method: Compositional matrix adjust.
 Identities = 232/504 (47%), Positives = 356/504 (71%), Gaps = 6/504 (1%)

Query  8    FAHIAIELQQGLSTRDRFQRLLNSLRQLLCCDAAALLRYENQLLRPLATDGLAPDVLGRR  67
            + ++  +L  +L++  R+QRL+ SLR+ + C A  LLR + + L+  A+ GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FRLSEHPRLEAIARAGDVVRFPADSQLPDPYDGLIPGQEA--LKVHACVGLPLFAHHTLI  125
            F++  HPRL  I   G+ VRF+ADS+LPDPYDGL+ +  A  L VH C+G+ L  +  L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GALTIDGMDPHQFDHFSDEELRLIGAMASVALSNALLMEQLERQTLAPLPDAVPMAEANA  185
            GA+T+D++ P  FD      LR  +++   AL  + L +++    LA  ++ V  A  + 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLAR-SGLVEPAVESQ  220

Query  186  DEIVGLSAPMQQLKKEVAIVADSDLNVLIMGETGVGKELVARAIHQGSRRASRSLVYLNC  245
            + I+G S+ ++ L KE+ IVAD++L VL+ GETGVGKEL A+ +H  S RA +++V +NC
Sbjct  221  NSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNC  280

Query  246  AALPESVAESELFGHVKGAFTGAIHHRTGKFELADNGTLFLDEIGELSLTLQAKLLRVLQ  305
            AALPE++AESELFGHV+GAF+GA ++R G+FE A  GTLFLDEIGEL+L++QAKLLR LQ
Sbjct  281  AALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQ  340

Query  306  YGDLQRVGDDSSLKVNVRVLAATNRDLKQSVQEGAFRADLFHRLSVFPLSVPPLRARGQD  365
             G++QR+G D +  VNVR++AATNR L + V+ G FRADL+HRLSV+P+ +PPLR RG+D
Sbjct  341  SGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHD  400

Query  366  IALLAGFFCERSRARLGLQRLALSPEATLLLVRYPWPGNVRELEHVIYRAT--IVARAGD  423
            + +LAG F E +R RLGL+ L L+++A   ++ Y+WPGNVRELEHVI RA+  ++++A  
Sbjct  401  VLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAES  460

Query  424  TTGDLTLRPEHLNLDGVLPDAPRPAAADTVPSWHGVSLRDATDHYQRQVISDTLARHQGN  483
              + L++ +  L L+ V  +++ ++ + ++++    SL+ A D YQRQ++ D+L RH+G+
Sbjct  461  RHALLSIEAAGLGLE-VTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGK  519

Query  484  WSACARELAVDSGNLHRMAKRLGI  507
            W++ AR L +D++NL+++A+RL +
Sbjct  520  WAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  364 bits (1367),  Expect = 8e-102, Method: Compositional matrix adjust.
 Identities = 236/525 (45%), Positives = 354/525 (68%), Gaps = 23/525 (4%)

Query  3    KISSTAVIE-LALDLATSLNTKDRFDRLLDTVRKTITCDAVALLSYHGDVLKPIALQGLS  61
            ++ ST+ ++ L  DL++ L +  R++RL+ ++R  + C AV LL  +GD L+  A  GL 
Sbjct  35   RVKSTSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLD  94

Query  62   RDTLGRRFYVEEHPRFLALCQSKSPIRFAADSPLPDPYDGLLIDREGD-LPVHSCMGLPL  120
             + LGR F VE HPR+  + +   P+RFAADS LPDPYDGLL D  +  LPVH CMG+ L
Sbjct  95   LEVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTL  154

Query  121  YYDDKLLGLLTIDSLTPHDFEDIDVRMLEVISAIAAATLNTAFLLDQLES-RADHSQRVV  179
              +++L G +T+D+L P  F+    R L   +++  ++L  + L +++ + R  +S  V 
Sbjct  155  RVQGRLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVE  214

Query  180  AELTEEAWKRDGGELIGESPIMSQLKQELDIVASSDFNILIYGETGVGKELVARTLHQKS  239
            + +  +        ++G+SP++  L +EL IVA +++ +L+ GETGVGKEL A+ LH +S
Sbjct  215  PAVESQ------NSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANS  268

Query  240  LRQHGPMVYVNCAALPENLIESELFGHVKGAFTGADRNRAGKFSLADGGTLFLDEIGELP  299
             R + PMV VNCAALPE L ESELFGHV+GAF+GA ++R G+F  A GGTLFLDEIGELP
Sbjct  269  PRARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELP  328

Query  300  FGAQSKILRAIQSNEIQPVGQDNVEEVDVRIVAATNRDLKEEVGEGRFRADLYHRLSVYP  359
            ++ Q+K+LRA+QS EIQ +G D   +V+VRI+AATNR L EEV  GRFRADLYHRLSVYP
Sbjct  329  LAIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYP  388

Query  360  IRVPRLYERVGDVQLLAGYFVEQTRRKLGIAQLKITEQAVAHLTQYNWPGNVRELEHVVS  419
            +++P L ER  DV +LAG F+E  R +LG+  L++T +A   +  Y WPGNVRELEHV+S
Sbjct  389  VHIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVIS  448

Query  420  RATLKARARQRDK-AIISIDKIDCGTLNAVGAELPIELIAESGLSSIAEQ---QVNLNLK  475
            RA+LK  ++   + A++SI+          +A L +E+ ++++ +S++     +   +L+
Sbjct  449  RAALKVLSQAESRHALLSIE----------AAGLGLEVTTHPAPASVPAAIAGETPYSLQ  498

Query  476  VETESFQKQLISRILKEEEGNWAAAARRLSTDRANLNRIAKRLNI  520
               +S+Q+QL+   L+ ++G+WA+AAR L  D +NL ++A+RLN+
Sbjct  499  AAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  363 bits (1365),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 228/528 (44%), Positives = 364/528 (69%), Gaps = 35/528 (6%)

Query  16   LTQLAIDLTQGVSSQGRFKRLLSVIRKQFGCDASALLAFNNDHFSPLAIDGLFDEVLGRR  75
            L +L  DL  ++++  R++RL++ +R +F C A  LL ++ D++   A  GL  EVLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  76   FNIHEHPRLEAIARAGDVVRFPADSELPDPYDGLIPNMVGK-LQVHSCIGLPLIANDQLI  134
            F+++ HPRL  I   G+ VRF+ADSELPDPYDGL+ +  +  L VH C+G+ L  +++L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  135  GALTIDAFNPQHFDSLSNEDLRIIsalasaslhtallMEKLEAQAGVMPQVDALHLETSS  194
            GA+T+DA+ P  FD+     LR      ++ ++TAL + +LE +      V +L+L  S+
Sbjct  162  GAVTLDALRPGSFDASVARRLR----ECAPLIETALRIGQLENE------VRGLRLARSG  211

Query  195  TVQ--------MIGQSVGMMDLKRDIKAVANTDLSVLITGETGVGKELVAASIHEKSSRA  246
             V+        ++G+S  + +L +++K VA+++L+VL+ GETGVGKEL A  +H +S+RA
Sbjct  212  LVEPAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRA  271

Query  247  KHTLVYLNCAALPESVAESELFGHVKGAFTGAISNRKGKFELANNSTLFLDEVGELSLTL  306
            ++ +V +NCAALPE++AESELFGHV+GAF+GA  +R+G+FE A+ +TLFLDE+GEL+L++
Sbjct  272  RQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAI  331

Query  307  QAKLLRVLQYGDVQRVGDEHSLKVNTRIVAATNRALHQEVKEGRFRADLYHRLNVFPVHV  366
            QAKLLR LQ G++QR+G +++  VN RI+AATNR+L +EV+ GRFRADLYHRL+V+PVH+
Sbjct  332  QAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHI  391

Query  367  PALRERQEDITLLSGFFTERCKAKLGLTNISMEYATSNLLKSYPWPGNVRELEHAINRAA  426
            P+LRER +D+ +L+G F E  + +LGL  + +   +   + +Y+WPGNVRELEH I+RAA
Sbjct  392  PPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAA  451

Query  427  VIAKSRSNDTYLVLKPSHFELKLEHDLITPRFAESNLAPQYSGQSHAEKLEQQSDEGLRE  486
            +   S+++    +L      L LE   +T + A +++++  +G++               
Sbjct  452  LKVLSQAESRHALLSIEAAGLGLE---VTTHPAPASVPAAIAGETPY-------------  495

Query  487  GLREATEQFQTTMIKQALQQHQMNWAATARALKIDTGNLHRLAKRLNL  534
            +L+ A + +Q  ++++ALQ+H+ +WA++ARAL +D +NL++LA+RLNL
Sbjct  496  SLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  362 bits (1360),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 251/532 (48%), Positives = 364/532 (69%), Gaps = 28/532 (5%)

Query  11   KVTQSSLLN-LAMDLASVTAQSNRFELLISAVRGAINCDAVVLLECRENVLVPLAQRGLL  69
            +V  +S+LN L  DL+S  + + R++ L++++R+ +NC AVVLL    + L   A  GL 
Sbjct  35   RVKSTSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLD  94

Query  70   DDVLGRHFVIDEHPRLAAICEDRYPVRFAADSPLPDPYDGMVVGHDD--LSVHSCMGIPL  127
             +VLGR F ++ HPRLA I E+  PVRFAADS LPDPYDG++ +     L+VH CMG+ L
Sbjct  95   LEVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTL  154

Query  128  YLEGCLIGAVTLDSIAPNEFDEIDSRaldiiaamaamalNTSMLMSKLERKSHRAQSLVQ  187
             ++G L GAVTLD++ P  FD   +R L   A++     +T++ +++LE +  R+  L +
Sbjct  155  RVQGRLWGAVTLDALRPGSFDASVARRLRECAPLI----ETALRIGQLE-NEVRGLRLAR  209

Query  188  ALTEDEHLKEGSSILGQSEVMSKLTQSIELVAPSDFAVLIEGETGVGKELVARKLHSLSQ  247
            +   +  +   +SILG+S V+  L + + +VA ++++VL++GETGVGKEL A+ LH+ S 
Sbjct  210  SGLVEPAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSP  269

Query  248  RASAPMVYVNCAAIPQHLIESELFGHVKGAFTGADRDRDGKFLLADGGTLFLDEIGELPL  307
            RA  PMV VNCAA+P+ L ESELFGHV+GAF+GA +DR+G+F  A GGTLFLDEIGELPL
Sbjct  270  RARQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPL  329

Query  308  EVQGTLLRAIQNQEIQAVGRDKTKNVDVRIIAATNRVLSDEVENKRFRADLFHRLSVFPV  367
             +Q+ LLRA+Q+ EIQ +G D+ K+V+VRIIAATNR L +EV + RFRADL+HRLSV+PV
Sbjct  330  AIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPV  389

Query  368  HVPPLRERQGDTLLLAGHFAEQYRRKLGLRQLIISESAGEVLRGYRWPGNVRELEHVISR  427
            H+PPLRER  D L+LAGHF E  R +LGLR L ++  A   + +Y WPGNVRELEHVISR
Sbjct  390  HIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISR  449

Query  428  AAL--LARSDQQSELTVIGPSHLTGIQEGKYTPFSQPEPQLSSEDARQFSSKDEFSSADV  485
            AAL  L++++ +  L  I ++ L G++       ++P P   +  +  +++   +S    
Sbjct  450  AALKVLSQAESRHALLSIEAAGL-GLEVT-----THPAP---ASVPAAIAGETPYS----  496

Query  486  HPVVNLKEATERYQKGIILDALRRKEGNWAQAARELSMDRANLVRLGKRLGI  537
                 L+ A + YQ+ ++ DAL+R +G+WA AAR L MD +NL +L++RL +
Sbjct  497  -----LQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  361 bits (1356),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 241/509 (48%), Positives = 355/509 (70%), Gaps = 13/509 (2%)

Query  2    SFSLNVLAGIAIELQSGIGHADRFQRLITTLRQVLECDASALLRYDARQFIPLAIDGLAQ  61
            SF   +LA+++ +L +++    R+QRL+++LR+ ++C A  LLR D+ ++   A  GL  
Sbjct  40   SFLNRLLADLPSDLPAAV----RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDL  95

Query  62   DVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGQ--ESLKVHACVGLPLF  119
            +VLGR F +E HPRL  I   G+ VRF+ADS+LPDPYDGL+ +    +L VH C+G+ L 
Sbjct  96   EVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLR  155

Query  120  AGQNLIGALTLDGMSPDQFDTFSDEElrliaalaagalnnalliEQLESQNMLPGAPAAF  179
                L GA+TLD++ P+ FD+     LR  A+L   AL  + L +++ +  +  ++    
Sbjct  156  VQGRLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEP  215

Query  180  EQVTRSEMIGLSAGMEQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEGSPRAINPL  239
               +++ ++G S+ +  L KE+ IVA ++L VL+ GETG GKEL A  +H  SPRA +P+
Sbjct  216  AVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPM  275

Query  240  VYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLSLQAKL  299
            V +NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+L++QAKL
Sbjct  276  VHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKL  335

Query  300  LRVLQYGDIQRVGDDRSLRVNVRVLAATNRDLREEVLAGRFRADLYHRLSVFPLSVPPLR  359
            LR LQ G+IQR+G DR+ +VNVR++AATNR L EEV  GRFRADLYHRLSV+P+ +PPLR
Sbjct  336  LRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLR  395

Query  360  ERGEDVVLLAGYFCEQCRLRLGLGRVALSPGARAHLLSYGWPGNVRELEHAIHRAV--VL  417
            ERG+DV++LAG F E  R+RLGL  + L+++A   +L+Y+WPGNVRELEH I RA   VL
Sbjct  396  ERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVL  455

Query  418  ARGTRNRDDVVLEARHFALSDEPTAPSAAVTPLPVEQN----LRDATEDFQRAFITRTLE  473
            +++   +  + +EA  ++L +  T P++A  P ++  +    L+ A + +QR ++  +L+
Sbjct  456  SQAESRHALLSIEAAGLGL-EVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQ  514

Query  474  EQGGNWAACARCLEMDVANLHRLAKRLGL  502
             + G+WA+ AR LEMD +NL++LA+RL L
Sbjct  515  RHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  361 bits (1355),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 247/516 (48%), Positives = 352/516 (69%), Gaps = 17/516 (3%)

Query  4    SVNLLATLAIELQQGLTHQDRFQRLITTLRQMLHCDASALLRYEGQQFRPLAIDGLAPDV  63
            S ++L  L  +L  +L    R+QRL+++LR+ ++C A  LLR +G++++  A  GL  +V
Sbjct  38   STSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEV  97

Query  64   LGRRFSLDTHPRLEAIARAGDIVRFPADSTLPDPYDGLIPGQQA--LKVHACVGLPLFAG  121
            LGR F ++ HPRL  I   G+ VRF+ADS LPDPYDGL+ +  A  L VH C+G+ L   
Sbjct  98   LGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQ  157

Query  122  HNLIGALTLDSMSPHQFDTFSNEELRLVSalaagalnnallIEQLESQ--NLLLPRDS--  177
              L GA+TLD++ P  FD+     LR      A  ++ AL I QLE++   L L+R +  
Sbjct  158  GRLWGAVTLDALRPGSFDASVARRLR----ECAPLIETALRIGQLENEVRGLRLARSGLV  213

Query  178  ASSAIPEAGMIGLSQGMQALKHEIEIVAASDLNVLISGETGTGKELVARAIHDASPRSAR  237
             ++  ++ +++G S  +++L  E+ IVA ++L VL+ GETG GKEL A+ +H  SPR+ +
Sbjct  214  EPAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQ  273

Query  238  TMVYLNCAALPETVAESELFGHVKGAFTGAIGNRQGKFELADHGTLFLDEIGELSLALQA  297
             MV +NCAALPET+AESELFGHV+GAF+GA  +RQG+FE A  GTLFLDEIGEL+LA+QA
Sbjct  274  PMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQA  333

Query  298  KLLRVLQYGDIQRVGDDQSLRVDVRVLAATNRDLKSEVLAGRFRADLYHRLSVFPLWVPP  357
            KLLR LQ G+IQR+G D++ +V+VR++AATNR L  EV  GRFRADLYHRLSV+P+ +PP
Sbjct  334  KLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPP  393

Query  358  LRERGGDIVLLAGYFCEQCRARLGLDSVILSEDAAAHLQQYAWPGNVRELEHAIYRATI-  416
            LRERG D+++LAG F E  R RLGL  + L+ DA   +  YAWPGNVRELEH I RA++ 
Sbjct  394  LRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALK  453

Query  417  VARAAQSGPDVVlsaahlplsaapGPEAPAQQStpapalpggtgaaELSLRDATDAFQRQ  476
            V   A+S   ++   A           APA  +      ++ +G +  SL+ A D++QRQ
Sbjct  454  VLSQAESRHALLSIEAAGLGLEVTTHPAPASVP------AAIAGETPYSLQAAVDSYQRQ  507

Query  477  LIEQALARHQHNWAASARALHLDVANLHRLAKRLGM  512
            L+++AL RH+ +WA++ARAL++D +NL++LA+RL +
Sbjct  508  LLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  360 bits (1352),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 250/513 (49%), Positives = 367/513 (72%), Gaps = 18/513 (3%)

Query  6    YLS-VIEDLSRDLPAEARYRRLLHAIRQTIPCDAIGLLRLVNDSLQPVAFLGLREEVRGR  64
            +L+ ++ DL+ DLPA  R +RL+ ++R+ + C A+ LLRL  D LQ  A +GL  EV GR
Sbjct  41   FLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGR  100

Query  65   RFTIEHHPRLKSILYSEQLVRFPADSELPDPYDGLLLATSE-HVHIHDCMGMSIYIDDKP  123
             F +E+HPRL  IL   + VRF+ADSELPDPYDGLL  ++   + +HDCMGM++ ++++ 
Sbjct  101  SFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRL  160

Query  124  WGVITLDAVQADQFESVDPQRQTLAISLTRAVVTAAERIHQLQQQV-----NRGHAATAQ  178
            WG +TLDA++++ F++  ++R     +L    + +A RI QL+++V      R+    + 
Sbjct  161  WGAVTLDALRPGSFDASVARRLRECAPL----IETALRIGQLENEVRGLRLARSGLVEPA  216

Query  179  LNKELALSEITGTSAGMQKILADVDMVAPTPLAVLIAGETGVGKELIARRLHLNSDRFNQ  238
            ++ +   + I G S+ ++ +L ++ +VA + L+VL+ GETGVGKEL+A++LH NS R  Q
Sbjct  217  VESQ---NSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQ  273

Query  239  PLVKlncaalpenlaeaelFGHTRGAFSGANGERAGRFELADGGTLFLDEVGELPLNLQA  298
            P+V +NCAALPE LAE+ELFGH RGAFSGA  +R GRFE A GGTLFLDE+GELPL +QA
Sbjct  274  PMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQA  333

Query  299  KLLRAIQEGEVQRIGSDHPVQVNVRIIAATNRDLEAEVEQGRFRADLFHRLSVFPITVPP  358
            KLLRA+Q GE+QR+G+D+P +VNVRIIAATNR L  EV +GRFRADL+HRLSV+P+ +PP
Sbjct  334  KLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPP  393

Query  359  LRDRQRDVLHLAEYFLERDQQRLKIQKLVLSAAARTALMQHSWPGNVRELEHVLSRAALR  418
            LR+R +DVL LA  FLE ++ RL ++ L L+A A  +++  +WPGNVRELEHV+SRAAL+
Sbjct  394  LRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALK  453

Query  419  A-SRKSLPGAIVVIDAIDLSLDDSTATSNSELSNNAAIAGVQVQDSLARQMQQFQRNLIT  477
              S+     A++ I+A +L+L+ +T  + + ++  AAIAG +   SL   ++ +QR+L+ 
Sbjct  454  VLSQAESRHALLSIEAAGLGLEVTTHPAPASVP--AAIAG-ETPYSLQAAVDSYQRQLLQ  510

Query  478  QALVETGGNIAAAARSLAVDRSNLLRLMKRLGI  510
            +AL    G+ A+AAR+L +D SNL +L +RL +
Sbjct  511  DALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  360 bits (1353),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 244/511 (48%), Positives = 350/511 (69%), Gaps = 16/511 (3%)

Query  26   LARIAIELQMGLSNQDRFQRLINSLRQLLRCDASALLRYENQLFRPLAIDGLAPDVLGRR  85
            L R+  +L  +L+   R+QRL+ SLR+ + C A  LLR + + ++  A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  86   FRLSDHPRLEAIARAGDVVRFPADSQLPDPYDGLI--PSQEDLKVHACVGLPLFANQNLI  143
            F++  HPRL  I   G+ VRF+ADS+LPDPYDGL+  ++   L VH C+G+ L  +  L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  144  GALTVDGMDPCQFDHFSDEElrlvgamaaaalsnallMERLERQLPAP--VRAE--SPAA  199
            GA+T+D++ P  FD      +       A+ +  AL + +LE ++ +    R+    PA 
Sbjct  162  GAVTLDALRPGSFD----ASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV  217

Query  200  ESVEEMVGLSEPMLR-LKKEVDIVAGSDLNVLIMGETGVGKELVARAIHRGSSRAIHPLV  258
            ES + ++G   P+LR L KE+ IVA+++L VL+ GETGVGKEL A+ +H  S+RA +P+V
Sbjct  218  ESQNSILG-DSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  259  YLNCAALPESVAESELFGHVKGAFTGAIHHRTGKFEMADNGTLFLDEIGELSLTLQAKLL  318
             +NCAALPE++AESELFGHV+GAF+GA ++R G+FE A  GTLFLDEIGEL+L++QAKLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  319  RVLQYGDLQRVGDDSSLKVNVRVLAATNRDLRQAVLDGAFRADLFHRLSVFPLSVPPLRE  378
            R LQ G++QR+G D +  VNVR++AATNR L + V  G FRADL+HRLSV+P+ +PPLRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  379  RSQDVALLAGFFCERSRVQLGLARLALTADAGALLEQYDWPGNVRELEHAIYRATVLARA  438
            R++DV +LAG F E +RV+LGL  L LTADA   +  Y WPGNVRELEH I RA++   +
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  439  GQESGEVLLGPEHFNLELYSQPVHTPAGAPSATDSVPDYFISGGLREATDDYQRRIIQHT  498
              ES + LL+ E   L L      +PA+ P+A  +   Y    +L+ A D YQR+++Q++
Sbjct  457  QAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY----SLQAAVDSYQRQLLQDA  512

Query  499  LARHEGNWSSCARELEIDSGNLHRLAKRLGI  529
            L RH+G+W++ AR LE+D++NL++LA+RL +
Sbjct  513  LQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  360 bits (1354),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 237/503 (48%), Positives = 348/503 (70%), Gaps = 9/503 (1%)

Query  8    LAKIAIELQTGIGHQDRFQRLISTLRHVLDCDASALLRYEGRQFIPLAIDGLAQDVLGRR  67
            L ++  +L +++    R+QRL+++LR+ ++C A  LLR +G ++   A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FTLEGHPRLETIARAGDVVRFPADSDLPDPYDGLI--PGQESLKVHACIGLPLFAGQNLI  125
            F +E HPRL  I   G+ VRF+ADS+LPDPYDGL+  +   +L VH C+G+ L     L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GALTLDGMSPDQFDTFSDEElrliaalaagalntallIEQLESQNILPGSPAAFEQVAHT  185
            GA+TLD++ P+ FD+     LR  A+L   AL  + L +++ +  +  ++       ++ 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  186  EMIGLSPGMVQLKKEIEIVAASDLNVLIFGETGTGKELVAKSIHEASPRAANPLVYLNCA  245
             ++G SP +  L KE+ IVA ++L VL+ GETG GKEL A  +H  SPRA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  246  ALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLSLQAKLLRVLQY  305
            ALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+L++QAKLLR LQ 
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  306  GDIQRVGDDRSLRVNVRVLAATNRDLREAVLNGNFRADLFHRLSVFPLTVPPLRERGDDV  365
            G+IQR+G DR+ +VNVR++AATNR L E V +G FRADL+HRLSV+P+ +PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  366  VLLAGFFCEQCRLKMGLSRVVLSPGARSHLLTYAWPGNVRELEHAIHRAV--VLARATRS  423
            ++LAG F E  R+++GL  + L+++A   +L+YAWPGNVRELEH I RA   VL++A   
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  424  GDEIVIHARHFALHEESAPFVKPATPESVNEN----LREATEEFQRQMITRALEQNNRSW  479
               + I+A  ++L+  + P   ++ P ++  +    L+ A + +QRQ++  AL+++N  W
Sbjct  462  HALLSIEAAGLGLEVTTHP-APASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKW  520

Query  480  AACARALEMDVANLHRLAKRLGL  502
            A+ ARALEMD +NL++LA+RL L
Sbjct  521  AGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  360 bits (1354),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 250/478 (53%), Positives = 348/478 (73%), Gaps = 5/478 (1%)

Query  53   FPGDAAALLRLEGDTLVPLAIDGLSSDTLGRRFRVTDHPRFEQLLSRPEPTRFAADSDLP  112
            F   A  LLRL+GD L   A  GL  + LGR F+V  HPR+ ++L   EP RFAADS+LP
Sbjct  70   FNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEGEPVRFAADSELP  129

Query  113  DPYDGLVQ-GAAGHLEVHDCLGCPLFVRGRPWGLLTLDALDPARFDSIDMaslqaflsla  171
            DPYDGL+Q ++A  L VHDC+G  L V+GR WG +TLDAL P+ FD+    S+   L   
Sbjct  130  DPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDA----SVARRLREC  185

Query  172  aaTVSVVERIDTLarsgeeerrraeayrqassqsrreMIGSSEAHTQLMQEIEVVAGSDL  231
            A+ +    RI+ L       R    +  +++ +S+  ++G S     L++E+ +VA+++L
Sbjct  186  APLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSILGDSPVLRGLLKELKIVADAEL  245

Query  232  TVLITGETGVGKELVANAIHALSSRANKPLVSLNCAALPDTLVESELFGHVRGAFSGASS  291
             VL+ GETGVGKEL A+ +HA S+RA +P+V +NCAALP+TL ESELFGHVRGAFSGA+ 
Sbjct  246  PVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAESELFGHVRGAFSGATQ  305

Query  292  DRRGKFELADGGTMFLDEVGELPLLVQAKLLRVLQNGQLQRIGSDHEHQVDVRLIAATNR  351
            DR+G+FE A GGT+FLDE+GELPL +QAKLLR LQ+G++QR+G+D+  +V+VR+IAATNR
Sbjct  306  DRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGADRPKHVNVRIIAATNR  365

Query  352  DLAEEVRAGRFRADLYHRLSVYPLRVPPLRERGRDVLLLAGFFLEENrsrlgllslrlaa  411
             L EEVR GRFRADLYHRLSVYP+++PPLRERG+DVL+LAG FLE NR RLGL  LRL+A
Sbjct  366  TLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTA  425

Query  412  daqaallRYPWPGNVRELEHLIGRSALKALAANRERRRILTLTATDFALSaapdettgpt  471
            DA+ ++L Y+WPGNVRELEH+I+R+ALK L+    R+ +L++ A++++L  + + + ++ 
Sbjct  426  DAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEAAGLGLEVTTHPAPASV  485

Query  472  padtpgtgVKDFRSAVTEFERTTVLDALARHSRNWAAVARELGLDRANLNRLAKRLGL  529
            PA  +G     +++AV  ++R  + DAL RH+ +WA+ AR L +D +NL +LA+RL L
Sbjct  486  PAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  360 bits (1354),  Expect = 8e-101, Method: Compositional matrix adjust.
 Identities = 236/502 (48%), Positives = 347/502 (70%), Gaps = 7/502 (1%)

Query  8    LAKIAIELQTGIGHQDRFQRLISTLRHVLDCDASALLRYEGRQFIPLAIDGLAQDVLGRR  67
            L ++  +L +++    R+QRL+++LR+ ++C A  LLR +G ++   A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FTLEGHPRLETIARAGDVVRFPADSDLPDPYDGLI--PGQESLKVHACIGLPLFAGQNLI  125
            F +E HPRL  I   G+ VRF+ADS+LPDPYDGL+  +   +L VH C+G+ L     L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GALTLDGMSPDQFDTFSDEElrliaalaagalnnalliEQLESQNILPGSPAAFEQVAHT  185
            GA+TLD++ P+ FD+     LR  A+L   AL  + L +++ +  +  ++       ++ 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  186  EMIGLSPGMVQLKKEIEIVAASDLNVLIFGETGTGKELVAKSIHEASPRAANPLVYLNCA  245
             ++G SP +  L KE+ IVA ++L VL+ GETG GKEL A  +H  SPRA +P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  246  ALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLSLQAKLLRVLQY  305
            ALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+L++QAKLLR LQ 
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  306  GDIQRVGDDRSLRVNVRVLAATNRDLREAVLNGNFRADLFHRLSVFPLTVPPLRERGDDV  365
            G+IQR+G DR+ +VNVR++AATNR L E V +G FRADL+HRLSV+P+ +PPLRERG+DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  366  VLLAGFFCEQCRLKMGLSRVVLSPGARGHLLTYGWPGNVRELEHAIHRAV--VLARATRS  423
            ++LAG F E  R+++GL  + L+++A   +L+Y+WPGNVRELEH I RA   VL++A   
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  424  GDKIVIHARHFALHDENIPSVKPAAPESVNE---NLREATEEFQRQMITRALEQNNRSWA  480
               + I+A  ++L+    P+  + ++    E   +L+ A + +QRQ++  AL+++N  WA
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWA  521

Query  481  ACARALEMDVANLHRLAKRLGL  502
            + ARALEMD +NL++LA+RL L
Sbjct  522  GAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  360 bits (1353),  Expect = 9e-101, Method: Compositional matrix adjust.
 Identities = 243/510 (48%), Positives = 349/510 (69%), Gaps = 14/510 (2%)

Query  8    LARIAIELQMGLSNQDRFQRLINSLRQLLRCDASALLRYENQLFRPLAIDGLAPDVLGRR  67
            L R+  +L  +L+   R+QRL+ SLR+ + C A  LLR + + ++  A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FRLSDHPRLEAIARAGDVVRFPADSQLPDPYDGLI--PSQEDLKVHACVGLPLFANQNLI  125
            F++  HPRL  I   G+ VRF+ADS+LPDPYDGL+  ++   L VH C+G+ L  +  L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GALTVDGMDPCQFDHFSDEElrlvgamaaaalsnallMERLERQLPAP--VRAE--SPAA  181
            GA+T+D++ P  FD      +       A+ +  AL + +LE ++ +    R+    PA 
Sbjct  162  GAVTLDALRPGSFD----ASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV  217

Query  182  ESVEEMVGLSEPMQRLKKEVDIVAGSDLNVLIMGETGVGKELVARAIHRGSSRASHPLVY  241
            ES + ++G S  ++ L KE+ IVA+++L VL+ GETGVGKEL A+ +H  S+RA +P+V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  242  LNCAALPESVAESELFGHVKGAFTGAIHHRTGKFEMADNGTLFLDEIGELSLTLQAKLLR  301
            +NCAALPE++AESELFGHV+GAF+GA ++R G+FE A  GTLFLDEIGEL+L++QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  302  VLQYGDLQRVGDDSSLKVNVRVLAATNRDLRQAVLDGAFRADLFHRLSVFPLSVPPLRER  361
             LQ G++QR+G D +  VNVR++AATNR L + V  G FRADL+HRLSV+P+ +PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  362  SQDVALLAGFFCERSRVQLGLARLALTADAGALLEQYDWPGNVRELEHAIYRATVLARAG  421
            ++DV +LAG F E +RV+LGL  L LTADA   +  Y WPGNVRELEH I RA++   + 
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  422  QESGEVLLGPEHFNLELPSQPVHATsssssAIDTAPAYFISGGLREATDDYQRRIIQQTL  481
             ES + LL+ E   L L      A +S ++AI    +Y    +L+ A D YQR+++Q++L
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY----SLQAAVDSYQRQLLQDAL  513

Query  482  ARHEGNWSSCARELEMDSGNLHRLAKRLGI  511
             RH+G+W++ AR LEMD++NL++LA+RL +
Sbjct  514  QRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  359 bits (1348),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 236/502 (48%), Positives = 352/502 (71%), Gaps = 11/502 (2%)

Query  15   DLNLNLPSGHHYKRLMQSLQSVLPCDASALFILDDSGLLSAAAVNGLSDEVLGQKFDPQQ  74
            DL  +LP++ + +RL+ SL+  + C A  L+ LD+  L + AAV GL  EVLG+ F+ ++
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAV-GLDLEVLGRSFQVER  106

Query  75   HPRLHAILTSREPVRFPATSTLPDPFDGLLKNDPNRSVNVHDCMGCSLYVEDHLVGLITL  134
            HPRL  IL   EPVRF+A S LPDP+DGLL++ P  ++ VHDCMG +L V+++L G +TL
Sbjct  107  HPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTL  166

Query  135  DAMQVGAFNCIDDItvatfaalaaatIRNVNQVEALRKSHRQQKNMNQVLIQEARNKGGE  194
            DA++ G+F    D +VA      A+ I    ++  L +  R  +     L++ A +    
Sbjct  167  DALRPGSF----DASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNS  222

Query  195  LVGVSPEIQSLRDNISMVAYSDYAVLISGETGTGKELVAHAVHSNSSRATQPMIYVNCAA  254
            ++G SP +++L  ++ +VA ++ +VL+ GETG GKEL AH +H+NS+RA QPM+ VNCAA
Sbjct  223  ILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAA  282

Query  255  LPESLAESELFGHVKGAFTGANSHRAGKFELADGGTIFLDEIGELPLLMQAKLLRVIQQG  314
            LPE+LAESELFGHV+GAF+GA  +R G+FE A GGT+FLDEIGELPL +QAKLLR +Q G
Sbjct  283  LPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSG  342

Query  315  EVQRVGADKNLMVNVRIIAATNRDLTEEVAAGRFRSDLFHRLNVFPINVPPLRHRQGDIA  374
            E+QR+GAD+   VNVRIIAATNR L EEV  GRFR+DL+HRL+V+P+++PPLR+R  D+ 
Sbjct  343  EIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVL  402

Query  375  VLSGHILDRVRTQFNVAKLQLHPKALTALTHYSWPGNVRELEHTLMRAGLRAI---QAQQ  431
            +L+GH+L+  R ++ +  L+L + A  ++  Y+WPGNVRELEH + RA+L+ +   ++++
Sbjct  403  MLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRH  462

Query  432  SLILQEH--LSDEVSHTYSYSAESEANDLPTTSFELRGAVEIYQTKLISHALQQSNFVWA  489
            +L+  E   L+ EV+ T + +A   A     T++ L++AV+ YQ +L+ +ALQ+ N  WA
Sbjct  463  ALLSIEAAGLGLEVT-THPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWA  521

Query  490  QAADFLQMDRGNLYKMGKKLGI  511
             AA  L+MD +NL K++++L +
Sbjct  522  GAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  359 bits (1350),  Expect = 2e-100, Method: Compositional matrix adjust.
 Identities = 235/505 (47%), Positives = 349/505 (70%), Gaps = 18/505 (3%)

Query  14   DLNSALTQQARFDTLLTTIREVLKCDSSALLLYEDQHFKPLAINGLAKEVLGRRFSIEQH  73
            DL S L    R++ L++++R+ ++C +  LL  ++++++  A  GL  EVLGR F +E+H
Sbjct  48   DLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERH  107

Query  74   PRLEAIARAGDIVRFPSDSDLPDPYDGLIPN-HDDKLHVHSCIGLPLLIDDQLIGAITID  132
            PRL  I   G+ VRF++DS+LPDPYDGL+ +     L VH C+G+ L ++++L GA+T+D
Sbjct  108  PRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLD  167

Query  133  AFDPNQFDGLRNQELRFVSalaagglhtalllEQLETQAS---LPRDSYAEKRTLS-NEI  188
            A+ P  FD+   + LR      A  ++TAL + QLE +     L+R +  E    S N I
Sbjct  168  ALRPGSFDASVARRLR----ECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQNSI  223

Query  189  IGNSQGMKNLQEQIDAVADTELSVLVMGETGVGKELVasaihhrssrssNTLVYLNCAAL  248
            +G+S  ++ L  ++  VAD+EL+VL+ GETGVGKEL A  +H  S+R+ + +V +NCAAL
Sbjct  224  LGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAAL  283

Query  249  PESVAESELFGHIKGAFTGAISNRKGKFEQADGGTLFLDEVGELSLELQAKLLRALQYGD  308
            PE++AESELFGH++GAF+GA  +R+G+FE A GGTLFLDE+GEL+L +QAKLLRALQ G+
Sbjct  284  PETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGE  343

Query  309  IQRVGDDRHIRVNTRIVAATNRILHEEVTAGRFRADLYHRLSVFPLHVPPLREREDDVVL  368
            IQR+G DR  +VN RI+AATNR L EEV  GRFRADLYHRLSV+P+H+PPLRER +DV++
Sbjct  344  IQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLM  403

Query  369  LAGFFAERLRSKLGLNSIRLSPALVLALKDYSWPGNVRELEHVIKRAG--VLAKA--RTH  424
            LAG F E  R +LGL  +RL++    ++  Y+WPGNVRELEHVI RA+  VL++A  R  
Sbjct  404  LAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHA  463

Query  425  AMDIELVEQDFDIRTPNQNIKNVEKTEQKSRLELPEGGLKPATDAFQKAMIVRALEKNQG  484
             + IE    ++++ T              +       +L++A D++Q+ ++  AL++++G
Sbjct  464  LLSIEAAGLGLEVTTHPAPASVPAAIAGETPY-----SLQAAVDSYQRQLLQDALQRHNG  518

Query  485  NWAATARQLELDNGNLHRLAKRLGI  509
            +WA++AR LE+D +NL++LA+RL +
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 220/511 (44%), Positives = 358/511 (71%), Gaps = 12/511 (2%)

Query  8    LTHIALDITSGLSNRDRFSRLLDIIRQNLNCDaaallaFQGQQFIPLAIDGLNADVLGRR  67
            L ++  D+ S+L+   R+ RL+  +R+++NC A  LL ++G+++   A  GL+ +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FLVDEHPRLEAIARAGDIVRFPADSDLADPYDGLIPN-QGDELKVHACIGLPLYADERLI  126
            F V+ HPRL  I   G+ VRF+ADS+L+DPYDGL+ +  +  L VH C+G+ L  + RL 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  127  GAITIDGFDPDQFQKFTNNELRSLSAIAAVSLSNALMIDRLEKAAFQSQDSGTAMSTDIT  186
            GA+T+D++ P+ F+      LR  +++    +  AL I++LE+     + + +++  + +
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPL----IETALRIGQLENEVRGLRLARSGL-VEPA  216

Query  187  TDNDVEMIGQSQNMQSLNNEINVVASTDLNVLILGETGTGKELIAKAVHQGSERKKSPLV  246
             +++  ++G+S  +++L +E+++VA ++L VL+ GETG GKEL+A  +H  S R + P+V
Sbjct  217  VESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMV  276

Query  247  YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFELADKGTLFLDEIGELPLTLQAKLL  306
             +NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGELPL++QAKLL
Sbjct  277  HVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLL  336

Query  307  RVLQYGDIQKIGDDRSRKVDVRIIAATNKDLKQEILAGRFRADLYHRLSVFPLMVPPLRE  366
            R LQ G+IQ++G DR++ V+VRIIAATN+ L +E+  GRFRADLYHRLSV+P+ +PPLRE
Sbjct  337  RALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRE  396

Query  367  RDDDITLLCGYFVERCRQKLGIKnlslnptslsllKQYDWPGNIRELEHALHRAA--VLA  424
            R++D+ +L G F+E  R +LG++ L L + +   +  Y WPGN+RELEH + RAA  VL+
Sbjct  397  RGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLS  456

Query  425  KSQAVNDLPQILPQHFDIPGQPQKDKVQLPGEISSPFQSSFTGSLKDATDEFQAQYIRHA  484
            ++++ + L  I +  +++    +     +P+ I++  ++++  SL+ A D +Q Q +++A
Sbjct  457  QAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAG--ETPY--SLQAAVDSYQRQLLQDA  512

Query  485  LAENQTQWAATARQLKVDSGNLHRLAKRLGL  515
            L  ++ +WA++AR L +D++NL++LA+RL L
Sbjct  513  LQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  358 bits (1343),  Expect = 5e-100, Method: Compositional matrix adjust.
 Identities = 236/504 (47%), Positives = 357/504 (71%), Gaps = 9/504 (1%)

Query  8    LAALAVDMQNGLPGRDRFNRMIASIHRLLHCDATALLRYEDRQFRPLATAGLAPDVMGRR  67
            L  L  D+ ++LP+  R++R++AS++  ++C A  LLR ++ +++  A+ GL  +V+GR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FSLAAHPRLEAIARAGDVVRFPADSFLPDPYDGLIPERQE--LHVHACVGMPLFSGQTLI  125
            F +  HPRL  I   G+ VRF+ADS LPDPYDGL+ +     L VH C+GM L     L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GALTLDGMSATQFDAYSDDELRGVASLAGSALHNALLVEQLEKTAAPFSRA-LENVQPDE  184
            GA+TLD++ +  FDA     LR  A+L  +AL+ + L +++   +  ++R+ L +   + 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEV--RGLRLARSGLVEPAVES  219

Query  185  RLEMIGESAPMQQLKKEISLVAPSDLNVLVLGETGVGKELVARELHAQSARAANPLVYVN  244
            +  ++G+S+ ++ L KE+ +VA ++L VL+ GETGVGKEL A+ LHA+S+RA +P+V VN
Sbjct  220  QNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVN  279

Query  245  CAALPESVAESELFGHVKGAFTGAIHDRRGKFELADNGTLFLDEVGELPLTLQAKLLRAL  304
            CAALPE++AESELFGHV+GAF+GA +DR+G+FE A  GTLFLDE+GELPL++QAKLLRAL
Sbjct  280  CAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRAL  339

Query  305  QYGDVQRVGEDKLLRVDVRIVAATNRDLRDAVAQGGFRADLYHRLSVFPLHVPALRERGD  364
            Q G++QR+G D+  +V+VRI+AATNR L + V +G FRADLYHRLSV+P+H+P+LRERG+
Sbjct  340  QSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGH  399

Query  365  DILLLAGYFCEKCRVKFGLNRVALSPQASEWLMAQRWPGNIRELEHALYRAI--IVAQAA  422
            D+L+LAG F E  RV++GL  + L+++A   ++A  WPGN+RELEH + RA   +++QA 
Sbjct  400  DVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAE  459

Query  423  SRGPELLLQAHHFAPGASVIAPRETpaaaappVE--NLQHATRQFQRDYIQRALHVAGNN  480
            SR + L ++A  ++   +  ++  + +AA +     +LQ A   +QR+ +Q AL+    +
Sbjct  460  SRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGK  519

Query  481  WAACARLLEMDPGNLHRLARKLGL  504
            WA+ AR LEMDP+NL++LAR+L L
Sbjct  520  WAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  358 bits (1343),  Expect = 6e-100, Method: Compositional matrix adjust.
 Identities = 226/505 (45%), Positives = 353/505 (70%), Gaps = 26/505 (5%)

Query  24   FEQLLTVLETVIASDASALLELQGEQLKPLAIKGLMPDSLGRRFKLSEHPRLEAICNTQQ  83
            +++L++ L   +   A  LL L+G++L+  A  GL  + LGR F++  HPRL  I +  +
Sbjct  59   LQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRSFQVERHPRLARILEEGE  118

Query  84   PLQFAHDCPLPDPYDGLLLAKTGD-IPVHACLGLPLFYQQQLLGVITFDSLNANAFNAIS  142
            P++FA D  LPDPYDGLL    +  +PVH C+G+ L  Q +L G +T+D+L + +F+A  
Sbjct  119  PVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLWGAVTLDALRPGSFDASV  178

Query  143  AQTLSTLQTLCSAHFKTALQLAHYKLHAQHSSALVQELNREALTRDGGE----IIGQSSA  198
            A+ L      C++ + TAL++++     ++  +L   L R +L   + E    I+G+S+ 
Sbjct  179  ARRLRE----CAPLIETALRIGQL---ENEVRGL--RLARSGLVEPAVESQNSILGDSPV  229

Query  199  IQALKNDIKLVAASNFSVLILGETGVGKELVARNIHLHSKRSEQPLIHLNCASLAENLAE  258
            +++L +++K+VA ++++VL+ GETGVGKEL A+ +H +S R+ QP++H+NCA+L+E LAE
Sbjct  230  LRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCAALPETLAE  289

Query  259  SEFFGHAKGAFTGADHARQGKFQLAHGGTLFLDEIGELPLVLQSKLLRVLQSGEIQTVGE  318
            SE+FGH +GAF+GA + RQG+F+ A GGTLFLDEIGELPL +Q+KLLR LQSGEIQ +G 
Sbjct  290  SELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQSGEIQRLGA  349

Query  319  DEVKYVDVRVIAATNRNLKKEVAEGRFRADLYHRLSVYPLTVAPLRQRENDVVLLAGFFV  378
            D  K V+VR+IAATNR L  EV  GRFRADLYHRLSVYP+ ++PLR+R +DV++LAG F+
Sbjct  350  DRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDVLMLAGHFL  409

Query  379  EQTARKLAIKQLKLSVDAQLLLTQYQWPGNVRELEHVISRAALKA-KQSQWQQAIITIKP  437
            E    +L+++ L+L+ DA+  +  Y WPGNVRELEHVISRAALK   Q++ ++A+++I +
Sbjct  410  ELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESRHALLSIEA  469

Query  438  EHCELNLSPSNTTQLSLPAsttntttgsstnIAEQNLSLKQATDTFTHHLISQQLEQHNY  497
                L+++ ++ +  S+PA+ +          +E   SL+ A D++ ++L+ + L++HN 
Sbjct  470  AGLGLEVT-THPAPASVPAAIA----------GETPYSLQAAVDSYQRQLLQDALQRHNG  518

Query  498  NWASAARTLKVDRANLVRLAKRLGI  522
            +WA+AAR+L +D +NL +LA+RL +
Sbjct  519  KWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  357 bits (1340),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 237/508 (47%), Positives = 351/508 (70%), Gaps = 9/508 (1%)

Query  2    SFSVDVLAGIAIQLQSGVGHQDRFQRLITTLRQVLECDASALLRYDARQFIPLAIDGLAQ  61
            SF   +LA+++ +L ++V    R+QRL+++LR+ ++C A  LLR D+ ++   A  GL  
Sbjct  40   SFLNRLLADLPSDLPAAV----RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDL  95

Query  62   DVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLI--PGQESLKVHACVGLPLF  119
            +VLGR F +E HPRL  I   G+ VRF+ADS+LPDPYDGL+  +   +L VH C+G+ L 
Sbjct  96   EVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLR  155

Query  120  AGQNLIGALTLDAMEPEQFDVFSDEELRlisalaagalsnalliEQLESQNMLPGAPAAF  179
                L GA+TLDA+ P  FD      LR  ++L   AL  + L +++ +  +  ++    
Sbjct  156  VQGRLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEP  215

Query  180  EPVANTDMIGLSPNMMQLKKEIEIVAASDLNVLISGETGTGKELVAKSIHEGSPRAANPL  239
               ++  ++G SP +  L KE+ IVA ++L VL+ GETG GKEL A  +H  SPRA +P+
Sbjct  216  AVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPM  275

Query  240  VYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKL  299
            V +NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+LA+QAKL
Sbjct  276  VHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKL  335

Query  300  LRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLR  359
            LR LQ G+IQR+G DR+ +V+VR++AATNR L EEV  GRFRADL+HRLSV+P+ +PPLR
Sbjct  336  LRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLR  395

Query  360  ERGDDVVLLAGYFCEQCRLRLGLSRVILSSGARAHLLSYGWPGNVRELEhavhravvlar  419
            ERG+DV++LAG F E  R+RLGL  + L+++A   +L+Y+WPGNVRELEH + RA +   
Sbjct  396  ERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVL  455

Query  420  aTRSGGEVILEAQHFAFE-ESVVAPVQESEAPALPE--CHNLRDATEHFQREMIRQALSQ  476
            +   + + +L  +  ++  E    P   S ++A++     +L+ A + +QR+++++AL +
Sbjct  456  SQAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQR  515

Query  477  NNNNWAASARALETDVANLHRLAKRLGM  504
            +N +WA++ARALE D +NL++LA+RL +
Sbjct  516  HNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  357 bits (1342),  Expect = 6e-100, Method: Compositional matrix adjust.
 Identities = 236/515 (46%), Positives = 350/515 (68%), Gaps = 11/515 (2%)

Query  5    SISTLVDMTIGLASGLNDEDRFNRLLDAVRKTIQCDCVALMSLQGDTLVPLAMQGLTRDT  64
            S S L  +  +L+S+L    R++RL+ ++R  ++C  V L+ L+GD L   A  GL  + 
Sbjct  38   STSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEV  97

Query  65   LGRRFLIHEHPRLDQICASTTPVRFDADSPLPdp-fdgllmdhdddlpmhSCMGLPLIFG  123
            LGR F ++ HPRL +I     PVRF ADS LPDP  + L       LP+H CMG+ L   
Sbjct  98   LGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQ  157

Query  124  DKLLGVLTLDSLMPNAFEHIPLRSLEVLAAIAASTLKMALTFSQLETQAKQTQQRLEELN  183
            ++L G +TLD+L P +F+    R L   A++  ++L+++    QLE + +  +     L 
Sbjct  158  GRLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIG----QLENEVRGLRLARSGLV  213

Query  184  EEAWVRDGGEIIGSSEAMQVMKADLEVVAPSNFNILIHGETGVGKELVARTIHHLSPRKR  243
            E A V     I+G S  ++ +  +L +VA +++ +L++GETGVGKEL A+ +H  SPR R
Sbjct  214  EPA-VESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRAR  272

Query  244  QPLIYVNCAAIPENLVESELFGHVKGAFTGADRNRLGKFALADGGTLFMDEIGELPLAAQ  303
            QP++ VNCAA+PE L ESELFGHV+GAF+GA ++R G+F  A GGTLF+DEIGELPLA Q
Sbjct  273  QPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQ  332

Query  304  SKILRALQNNEIQPVGQDQVQTINVRILAATNRDLKQEVDAGRFRADLYHRLSVYPIHVP  363
            +K+LRALQ+ EIQ +G D+ + +NVRI+AATNR L +EV  GRFRADLYHRLSVYP+H+P
Sbjct  333  AKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIP  392

Query  364  PLRERNGDVTLLAGYFLEVARRKLGIVQLKIHQQALSHLIYYTWPGNVRELEHVINRAAL  423
            PLRER  DV +LAG FLE+ R +LG+  L++  +A   ++ Y+WPGNVRELEHVI+RAAL
Sbjct  393  PLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAAL  452

Query  424  KA-RAKHPMQTLITVSAEDIGVLEGDAHTPAKAVPSAQTEPVIDLSKGLRDATDDFQRRL  482
            K     ++ ++L+++ A ++G LE  +H ++ +VP+A +    + + +L+ A D +QR+L
Sbjct  453  KVLSQAESRHALLSIEAAGLG-LEVTTHPAPASVPAAIAG---ETPYSLQAAVDSYQRQL  508

Query  483  VSEALTQAEFNWAKAGRLLQVDRANLTRLAKRLGI  517
            + +AL + + +WA A+R L++D +NL +LA+RL +
Sbjct  509  LQDALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  357 bits (1341),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 238/502 (48%), Positives = 351/502 (70%), Gaps = 7/502 (1%)

Query  8    LAKIAIELQSDIGHADRFARLIATLRQLLGCDASALLRYEAHQFIPLAIDGLAQDVLGRR  67
            L ++  +L SD+  A R+ RL+A+LR+ + C A  LLR +++++   A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FTLDGHPRLEAIARAGDVVRFPADSDLPDPYDGMIPGQ--ESLKVHACVGLPLFAGQRLI  125
            F ++ HPRL  I   G+ VRF+ADS+LPDPYDG++ +    +L VH C+G+ L    RL 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GALTLDGMDAEQFDSFSDEELRLVAALVSGALNNALLIARLESQNALSGGEATDSAPTHT  185
            GA+TLD++ +  FD+     LR  A+L+  AL  + L   + +     +G    +  ++ 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAVESQN  221

Query  186  EMIGLSAPMQQLIKEIGIVAASDLNVLITGETGTGKELVAKAIHEGSARAASPLVYLNCA  245
             ++G S+ ++ L+KE+ IVA ++L VL+ GETG GKEL A  +H  S+RA  P+V +NCA
Sbjct  222  SILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVHVNCA  281

Query  246  ALPESVAESELFGHVKGAFTGAISNRSGKFETADNGTLFLDEIGELSLALQAKLLRVLQY  305
            ALPE++AESELFGHV+GAF+GA  +R G+FETA  GTLFLDEIGEL+LA+QAKLLR LQ 
Sbjct  282  ALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLRALQS  341

Query  306  GDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLYHRLSVFPLLVPPLREREDDV  365
            G+IQR+G DR+ +V+VR++AATNR L EEV  GRFRADLYHRLSV+P+ +PPLRER +DV
Sbjct  342  GEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRERGHDV  401

Query  366  VLLAGYFCEQCRLRLGLSRVVLTPAARARLTGYGWPGNVRELEHAIHRAV--VLARAAGT  423
            ++LAG F E  R+RLGL  + LT+ A   + +Y+WPGNVRELEH I RA   VL++A + 
Sbjct  402  LMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQAESR  461

Query  424  GDEVLLEPSHFG---AGQEAATGAAPSVPAMEGMNLRDATDAFQREAITRaltanqntwa  480
               + +E++ +G   + + A+++ ++++++    +L+ A D++QR+ +  AL  ++  WA
Sbjct  462  HALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHNGKWA  521

Query  481  aaaralEMDVANLHRLAKRLGL  502
            +AARALEMD +NL++LA+RL L
Sbjct  522  GAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  357 bits (1342),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 242/512 (48%), Positives = 354/512 (70%), Gaps = 17/512 (3%)

Query  2    SFSVEVLASIAIELQRGIGHQDRFQRLISTLRQVLECDASALLRYESRQFIPLAIDGLAQ  61
            SF   +LA ++ +L  ++    R+QRL+++LR+ ++C A  LLR ++ ++   A  GL  
Sbjct  40   SFLNRLLADLPSDLPAAV----RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDL  95

Query  62   DVLGRRFTLEGHPRLEAIARAGDVVRFPADSSLADPYDGLI--PGQESLKVHACVGLPLF  119
            +VLGR F +E HPRL  I   G+ VRF+ADS L+DPYDGL+  +   +L VH C+G+ L 
Sbjct  96   EVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLR  155

Query  120  AGQNLIGALTLDAMEPNQFDIFSDEElrliaalaagalsnallIEQLESQ--NMLPGTPP  177
                L GA+TLDA+ P  FD      +       A  +  AL I QLE++   +  + + 
Sbjct  156  VQGRLWGAVTLDALRPGSFD----ASVARRLRECAPLIETALRIGQLENEVRGLRLARSG  211

Query  178  AFEQVKETQ--MIGLSPNMIQLKKEIEIVAGSDLNVLISGETGTGKELVAKAIHEGSPRA  235
              E   E+Q  ++G SP +  L KE+ IVA+++L VL+ GETG GKEL A  +H  SPRA
Sbjct  212  LVEPAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRA  271

Query  236  VNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLAL  295
             +P+V +NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+LA+
Sbjct  272  RQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAI  331

Query  296  QAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVIAGRFRADLFHRLSVFPLFV  355
            QAKLLR LQ G+IQR+G DR+ +V+VR++AATNR L EEV  GRFRADL+HRLSV+P+ +
Sbjct  332  QAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHI  391

Query  356  PPLRERGDDVVLLAGYFCEQCRLRLGLARVVLSPGAHRHLLSYGWPGNVRELEHAIHRAV  415
            PPLRERG+DV++LAG F E  R+RLGL  + L+++A+R +L+Y+WPGNVRELEH I RA 
Sbjct  392  PPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAA  451

Query  416  --VLARATRAGDEVVLEAQHFALQEAALVGQTAEPVP-EMPVSHNLRDATETFQREMIRR  472
              VL++A      + +EA  ++L+ ++  + ++ P +     + +L+ A +++QR++++ 
Sbjct  452  LKVLSQAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQD  511

Query  473  ALAQNNHNWAASARMLETDVANLHRLAKRLGL  504
            AL ++N +WA++AR LE D +NL++LA+RL L
Sbjct  512  ALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  357 bits (1342),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 242/512 (48%), Positives = 354/512 (70%), Gaps = 17/512 (3%)

Query  2    SFSVEVLASIAIELQRGIGHQDRFQRLISTLRQVLECDASALLRYESRQFIPLAIDGLAQ  61
            SF   +LA ++ +L  ++    R+QRL+++LR+ ++C A  LLR ++ ++   A  GL  
Sbjct  40   SFLNRLLADLPSDLPAAV----RLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDL  95

Query  62   DVLGRRFTLEGHPRLEAIARAGDVVRFPADSSLADPYDGLI--PGQESLKVHACVGLPLF  119
            +VLGR F +E HPRL  I   G+ VRF+ADS L+DPYDGL+  +   +L VH C+G+ L 
Sbjct  96   EVLGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLR  155

Query  120  AGQNLIGALTLDAMEPNQFDIFSDEElrliaalaagalsnallIEQLESQ--NMLPGTPP  177
                L GA+TLDA+ P  FD      +       A  +  AL I QLE++   +  + + 
Sbjct  156  VQGRLWGAVTLDALRPGSFD----ASVARRLRECAPLIETALRIGQLENEVRGLRLARSG  211

Query  178  AFEQVKETQ--MIGLSPNMIQLKKEIEIVAGSDLNVLISGETGTGKELVAKAIHEGSPRA  235
              E   E+Q  ++G SP +  L KE+ IVA+++L VL+ GETG GKEL A  +H  SPRA
Sbjct  212  LVEPAVESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRA  271

Query  236  VNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLAL  295
             +P+V +NCAALPE++AESELFGHV+GAF+GA  +R G+FE A  GTLFLDEIGEL+LA+
Sbjct  272  RQPMVHVNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAI  331

Query  296  QAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVIAGRFRADLFHRLSVFPLFV  355
            QAKLLR LQ G+IQR+G DR+ +V+VR++AATNR L EEV  GRFRADL+HRLSV+P+ +
Sbjct  332  QAKLLRALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHI  391

Query  356  PPLRERGDDVVLLAGYFCEQCRLRLGLARVVLSPGAHRHLLSYGWPGNVRELEHAIHRAV  415
            PPLRERG+DV++LAG F E  R+RLGL  + L+++A+R +L+Y+WPGNVRELEH I RA 
Sbjct  392  PPLRERGHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAA  451

Query  416  --VLARATRAGDEVVLEAQHFALQEAALVGQTAEPVP-EMPVSHNLRDATETFQREMIRR  472
              VL++A      + +EA  ++L+ ++  + ++ P +     + +L+ A +++QR++++ 
Sbjct  452  LKVLSQAESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQD  511

Query  473  ALAQNNHNWAASARMLETDVANLHRLAKRLGL  504
            AL ++N +WA++AR LE D +NL++LA+RL L
Sbjct  512  ALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  357 bits (1341),  Expect = 7e-100, Method: Compositional matrix adjust.
 Identities = 226/513 (45%), Positives = 355/513 (70%), Gaps = 14/513 (2%)

Query  8    LTRIALDITSGLAHRDRFSRLLDTVRANLHCDAAALLTFHGHYFTPLAIDGLNEDVLGRR  67
            L R+  D+ S+L+   R+ RL+ ++R +++C A  LL ++G+ +   A  GL+ +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FILNEHPRLEAIARAGDIVRFPADSELADPYDGLIPN-QTGALKVHACIGLPLFADEQLI  126
            F ++ HPRL  I   G+ VRF+ADSEL+DPYDGL+ +  + +L VH C+G+ L  + +L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  127  GAVTIDAFNPLQFDQFSNTElrslsaiaaaslsnallVEKLERMALNSHSTHVQEKSPNL  186
            GAVT+DA+ P  FD    + +       A+ +  AL + +LE      + ++     P +
Sbjct  162  GAVTLDALRPGSFD----ASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV  217

Query  187  NHDAEIIGNSPQMQSLNREIEVVAHSDLNVLILGETGTGKELVAQAIHQKSARQHKPLVY  246
            + +  I+G+SP +++L +E+ +VA+++L VL+ GETG GKEL A+ +H +S+R ++P+V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  247  LNCAALPESVAESELFGHIKGAFTGAISHRSGKFEMADKGTLFLDEIGELPLTLQAKLLR  306
            +NCAALPE++AESELFGH++GAF+GA  +R G+FE A  GTLFLDEIGELPL++QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  307  VLQYGDIQKVGDDRSLKVDVRIIAATNKDLKTEVLAGRFRADLYHRLSVFPLLVPPLRER  366
             LQ G+IQ++G DR+  V+VRIIAATN+ L  EV  GRFRADLYHRLSV+P+ +PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  367  EQDITLLSGFFAERYRQKLGMKQLNFSPSSLMLLNQYAWPGNVRELEHAIHRAT--VLAR  424
             +D+ +L+G F E  R +LG++ L +++ +   +  YAWPGNVRELEH I RA+  VL++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  425  VSAQDGCCTIAPQHFDLPFKQSSVETNASTSLSVNDMQLRPLEGASLAQATDAFQRDFIK  484
              ++++  +I +  ++L     +  ++ +++++ +          SL  A D++QR++++
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGET-------PYSLQAAVDSYQRQLLQ  510

Query  485  QVLTAHNGNWAASARALGLDPGNLHRLAKRLRL  517
            + L  HNG+WA++ARAL +DP+NL++LA+RL L
Sbjct  511  DALQRHNGKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  356 bits (1336),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 236/506 (47%), Positives = 350/506 (70%), Gaps = 4/506 (0%)

Query  4    NQTLLTRIALDITSGLSHRDRFARLVDTVKANLGCDAAALLEFRDRHFVPLATAGLAEDV  63
            + ++L R+  D+ S+L+   R+ RLV +++ ++ C A  LL + + ++   A+ GL  +V
Sbjct  38   STSFLNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEV  97

Query  64   AGRHFAIDSHPRLEAIARAGDLVRFPADSALPDPYDGLIPN-QEDRLHVHACIGLPLFDD  122
             GR F ++ HPRL  I   G+ VRF+ADS LPDPYDGL+ +     L VH C+G+ L  +
Sbjct  98   LGRSFQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQ  157

Query  123  EKLIGALTLDAFDPQRFDNLGTMElralgalsaaslknallldklERVSLLGHGSREANN  182
             +L GA+TLDA+ P  FD   +  LR  ++L  ++L+ + L + +  + L   G  E+  
Sbjct  158  GRLWGAVTLDALRPGSFDASVARRLRECAPLIETALRIGQLENEVRGLRLARSGLVEPAV  217

Query  183  DTP-PMVGNAPVMESLRQEILAVAGTDLSVLILGETGTGKELVARAVHQASPRANKALVY  241
            ++  +++G++PV+ +L +E+  VA+++L+VL+ GETG GKEL A+ +H  SPRA +++V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  242  LNCAALPESVAESELFGHVKGAFTGAISHRSGKFETADKGTLFLDEIGELPLGLQAKLLR  301
            +NCAALPE++AESELFGHV+GAF+GA  +R G+FETA  GTLFLDEIGELPL++QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  302  VLQYGDVQRIGDDRSLKVDVRIIAATNKDLKQEVLAGRFRADLYHRLSVFPLHVPPLRER  361
             LQ G++QR+G DR+  V+VRIIAATN+ L +EV  GRFRADLYHRLSV+P+H+PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  362  PEDLGPLCGHFLEQSRKSLGLSVLRIRPDALSRLKNHDWPGNVRELEHVIKRAA--TLAR  419
             +D+  L GHFLE +R  LGL  LR+ +DA   +    WPGNVRELEHVI RAA   L++
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  420  AASDDGAVMIEPQMLAIGGQSASLPVQSPVTGAQVEGKNLKEATDAFQAAYIGQILSANR  479
            A S ++ + IE+  L++   + + P   P + A     +L+ A D++Q   + + L  + 
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPYSLQAAVDSYQRQLLQDALQRHN  517

Query  480  GNWASTARALGLDPGNLHRLAKRLGL  505
            G+WA++ARAL +DP+NL++LA+RL L
Sbjct  518  GKWAGAARALEMDPSNLRKLARRLNL  543

> DQ437743|36|G33|90569649|ABD94719.1|Pseudomonas_aeruginosa_19660|-|20864..22498|norR|EXB33|putative 
nitric oxide reductase 
transcriptional regulator
Length=544

 Score =  355 bits (1335),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 231/511 (46%), Positives = 348/511 (69%), Gaps = 21/511 (4%)

Query  8    LARIAIQLQSGISHQDRFQRLINTLRQLLGCDASALLRYEQRQFRPLAIDGLAPDVLGRR  67
            L R+  +L S+++   R+QRL+ +LR+ + C A  LLR +  +++  A  GL  +VLGR 
Sbjct  42   LNRLLADLPSDLPAAVRLQRLVASLRDEFNCSAVVLLRLDGDRLQTQAAVGLDLEVLGRS  101

Query  68   FSLDAHPRLEAIARAGDVVRFPAESHLPDPYDGLIPSRQD--LKVHACIGLPLFADQTLI  125
            F ++ HPRL  I   G+ VRF+A+S+LPDPYDGL+       L VH C+G+ L  +  L 
Sbjct  102  FQVERHPRLARILEEGEPVRFAADSELPDPYDGLLQDSPATPLPVHDCMGMTLRVQGRLW  161

Query  126  GALTIDGMDPAQFDHFSDEELRVVGalasaalanallVEQLESQTIT-PLSISNI--PAG  182
            GA+T+D++ P+ FD      LR  ++L  +AL     + QLE++     L+ S +  PA 
Sbjct  162  GAVTLDALRPGSFDASVARRLRECAPLIETALR----IGQLENEVRGLRLARSGLVEPAV  217

Query  183  KPGTEMVGLSEVMRQLKREIEMVAGSDLNVLITGETGVGKELVAKAIHEGSSRAGQSVVY  242
             +   ++G S V+R L +E+ +VA+++L VL+ GETGVGKEL A  +H  S+RA Q++V 
Sbjct  218  ESQNSILGDSPVLRGLLKELKIVADAELPVLLQGETGVGKELFAHWLHANSPRARQPMVH  277

Query  243  LNCAALPESVAESELFGHVKGAFTGAIHHRTGKFEMADNGTLFLDEIGELSLNLQAKLLR  302
            +NCAALPE++AESELFGHV+GAF+GA ++R G+FE A  GTLFLDEIGEL+L +QAKLLR
Sbjct  278  VNCAALPETLAESELFGHVRGAFSGATQDRQGRFETASGGTLFLDEIGELPLAIQAKLLR  337

Query  303  VLQYGDLQRVGDDNVLRVNVRVLAATNRDLKQEVLNNRFRADLFHRLSVFPVHVPPLRER  362
             LQ G++QR+G D   +VNVR++AATNR L +EV + RFRADL+HRLSV+PVH+PPLRER
Sbjct  338  ALQSGEIQRLGADRPKHVNVRIIAATNRTLIEEVRKGRFRADLYHRLSVYPVHIPPLRER  397

Query  363  DQDITLLAGFFCEQSRERMGLKRVALAANCLSLLKQYTWPGNVRELEHAVYRATI-IARA  421
            ++D+ +LAG F E +R R+GL+ + L+A+    +  Y+WPGNVRELEH + RA++ +   
Sbjct  398  GHDVLMLAGHFLELNRVRLGLRCLRLTADAERTVLAYAWPGNVRELEHVISRAALKVLSQ  457

Query  422  TQQSDELL------LEAQHFNQVPEQMVAPPVALDVPFLGVEQGLREATDDFQRQLIDNT  475
            ++  + LL      L  +   + +   V++++A + P+     +L+ A D +QRQL++++
Sbjct  458  AESRHALLSIEAAGLGLEVTTHPAPASVPAAIAGETPY-----SLQAAVDSYQRQLLQDA  512

Query  476  LNNCARKWSACARMLDMDVANLHRLAKRLGL  506
            L+    KW++ AR L+MD +NL++LA+RL L
Sbjct  513  LQRHNGKWAGAARALEMDPSNLRKLARRLNL  543