Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
HrpS type III protein secretion system regulatory protein |
NC_014500 (Dickeya dadantii 3937) |
1e-90 |
61 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_022268 (Serratia sp. ATCC 39006) |
3e-89 |
65 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_012912 (Dickeya zeae Ech1591) |
2e-88 |
63 |
|
sigma54 specific transcriptional regulator, Fis family |
NC_013592 (Dickeya dadantii Ech586) |
6e-88 |
63 |
|
HrpS |
NC_018525 (Pectobacterium carotovorum PCC21) |
2e-84 |
61 |
|
sigma-54-dependent enhancer-binding protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
3e-84 |
60 |
|
Fis family sigma-54 specific transcriptional regulator |
NC_012917 (Pectobacterium carotovorum PC1) |
2e-83 |
60 |
|
hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrpS protein |
NC_017445 (Erwinia sp. Ejp617) |
2e-83 |
60 |
|
Sigma-54-dependent enhancer-binding protein HrpS (hrp cluster) |
NC_010694 (Erwinia tasmaniensis Et1/99) |
6e-83 |
60 |
|
Sigma-54-dependent enhancer-binding protein HrpS |
NC_017390 (Erwinia pyrifoliae DSM 12163) |
9e-83 |
60 |
|
Hrp/hrc secretion/translocation pathway protein HrpS |
NC_012214 (Erwinia pyrifoliae Ep1/96) |
9e-83 |
60 |
|
type III transcriptional regulator HrpR |
NC_007005 (Pseudomonas syringae B728a) |
1e-82 |
58 |
|
sigma-54-dependent enhancer-binding protein |
NC_013971 (Erwinia amylovora ATCC 49946) |
1e-81 |
60 |
|
sigma-54-dependent enhancer-binding protein HrpS |
NC_013961 (Erwinia amylovora CFBP1430) |
1e-81 |
60 |
|
type III transcriptional regulator HrpR |
NC_005773 (Pseudomonas syringae 1448A) |
8e-82 |
58 |
|
type III transcriptional regulator HrpR |
NC_004578 (Pseudomonas syringae DC3000) |
2e-81 |
59 |
|
Fis family transcriptional regulator |
NC_015379 (Pseudomonas brassicacearum NFM421) |
2e-81 |
56 |
|
protein HrpS |
NC_016830 (Pseudomonas fluorescens F113) |
9e-81 |
56 |
|
sigma-54 interacting regulator |
NC_020064 (Serratia marcescens FGI94) |
2e-80 |
62 |
|
type III secretion system transcriptional regulator RspS |
NC_017911 (Pseudomonas fluorescens A506) |
2e-79 |
57 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
2e-78 |
57 |
|
type III transcriptional regulator HrpS |
NC_004578 (Pseudomonas syringae DC3000) |
1e-76 |
59 |
|
type III transcriptional regulator HrpS |
NC_007005 (Pseudomonas syringae B728a) |
7e-76 |
59 |
|
sigma-54 dependent trancsriptional regulator |
NC_009439 (Pseudomonas mendocina ymp) |
2e-75 |
56 |
|
putative type III secretion system, regulatory protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
3e-72 |
56 |
|
type III transcriptional regulator HrpS |
NC_005773 (Pseudomonas syringae 1448A) |
1e-70 |
58 |
|
type III secretion system transcriptional regulator RspS |
NC_020209 (Pseudomonas poae RE*1-1-14) |
2e-63 |
57 |
|
Fis family transcriptional regulator |
NC_015388 (Desulfobacca acetoxidans DSM 11109) |
3e-42 |
46 |
|
Fis family transcriptional regulator |
NC_008340 (Alkalilimnicola ehrlichii MLHE-1) |
6e-41 |
41 |
|
phage shock protein operon transcriptional activator |
NC_009436 (Enterobacter sp. 638) |
6e-36 |
43 |
|
psp operon transcriptional activator |
NC_017564 (Yersinia enterocolitica Y11) |
2e-35 |
43 |
|
sigma54 specific transcriptional activator, PspF, Fis family |
NC_022268 (Serratia sp. ATCC 39006) |
4e-35 |
43 |
|
DNA-binding transcriptional activator |
NC_014500 (Dickeya dadantii 3937) |
6e-35 |
43 |
|
psp operon transcriptional activator PspF |
NC_020064 (Serratia marcescens FGI94) |
4e-34 |
41 |
|
phage shock protein operon transcriptional activator |
NC_012880 (Dickeya dadantii Ech703) |
8e-34 |
42 |
|
transcriptional regulator |
NC_021741 (Serratia liquefaciens ATCC 27592) |
9e-34 |
41 |
|
phage shock protein operon transcriptional activator |
NC_012912 (Dickeya zeae Ech1591) |
1e-33 |
42 |
|
psp operon transcriptional activator |
NC_021591 (Serratia odorifera 4Rx13) |
3e-33 |
41 |
|
transcriptional regulator |
NC_021659 (Serratia plymuthica S13) |
3e-33 |
41 |
|
DNA-binding transcriptional activator |
NC_020211 (Serratia marcescens WW4) |
4e-33 |
41 |
|
Fis family transcriptional regulator |
NC_015567 (Serratia plymuthica AS9) |
6e-33 |
41 |
|
Fis family sigma-54 specific transcriptional activator PspF |
NC_015566 (Serratia sp. AS12) |
6e-33 |
41 |
|
Fis family sigma-54 specific transcriptional activator PspF |
NC_017573 (Serratia sp. AS13) |
6e-33 |
41 |
|
Psp operon transcriptional activator |
NC_017845 (Pectobacterium sp. SCC3193) |
5e-32 |
41 |
|
phage shock protein operon transcriptional activator |
NC_013421 (Pectobacterium wasabiae WPP163) |
2e-31 |
41 |
|
Fis family transcriptional regulator |
NC_014365 (Desulfarculus baarsii DSM 2075) |
7e-27 |
43 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AY597283' AND ph.id_pai_orf='36' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc