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PAthogenisity Island DataBase (PAI DB)

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Homologs of flu gene of AJ303141

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) flu
( YP_006129336.1 )

CP4-44 prophage; antigen 43 (Ag43)phase-variable biofilm formation autotransporter

NC_017638
(Escherichia coli DH1)

0.0

2) flu
( YP_002415461.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter; CP4-44 prophage

NC_011751
(Escherichia coli UMN026)

0.0

3) flu1
( YP_006096552.1 )

antigen 43 precursor (fluffing protein) (autotransporter)

NC_017626
(Escherichia coli 042)

0.0

4) ECO26_5486
( YP_003232352.1 )

adhesin

NC_013361
(Escherichia coli 11368)

0.0

5) EcDH1_1657
( YP_006091610.1 )

outer membrane autotransporter barrel domain-containing protein

NC_017625
(Escherichia coli DH1)

0.0

6) flu
( YP_001730949.1 )

CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter

NC_010473
(Escherichia coli K-12)

0.0

7) flu
( YP_002926987.1 )

CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter

NC_012759
(Escherichia coli K-12)

0.0

8) flu
( YP_490241.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter

NC_007779
(Escherichia coli K-12)

0.0

9) flu
( YP_026164.1 )

CP4-44 prophage; antigen 43 (Ag43) phase-variable biofilm formation autotransporter

NC_000913
(Escherichia coli K12)

0.0

10) ECO26_2901
( YP_003229866.1 )

AidA-I adhesin

NC_013361
(Escherichia coli 11368)

0.0

11) ECP_0332
( YP_668265.1 )

autotransporter

NC_008253
(Escherichia coli 536)

0.0

12) flu
( YP_005728617.1 )

Outer membrane fluffing protein

NC_017328
(Shigella flexneri 2002017)

0.0

13) SF2991
( NP_708765.1 )

outer membrane fluffing protein

NC_004337
(Shigella flexneri 301)

0.0

14) c3655
( NP_755530.1 )

antigen 43

NC_004431
(Escherichia coli CFT073)

0.0

15) flu2
( YP_006098789.1 )

antigen 43 autotransporter (fluffing protein) [contains: antigen 4 alpha chain; antigen 43 beta chain]

NC_017626
(Escherichia coli 042)

0.0

16) flu
( YP_002400911.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter; CP4-44 prophage

NC_011745
(Escherichia coli ED1a)

0.0

17) c1273
( NP_753187.1 )

antigen 43

NC_004431
(Escherichia coli CFT073)

0.0

18) i14_1166
( YP_006153291.1 )

antigen 43 precursor

NC_017652
(Escherichia coli clone D i14)

0.0

19) i02_1166
( YP_006148372.1 )

antigen 43 precursor

NC_017651
(Escherichia coli clone D i2)

0.0

20) flu
( YP_002414067.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter; CP4-44 prophage

NC_011751
(Escherichia coli UMN026)

0.0

21) ECABU_c12300
( YP_006105327.1 )

putative antigen 43

NC_017631
(Escherichia coli ABU 83972)

0.0

22) O3M_04255
( YP_006768530.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter, CP4-44 prophage

NC_018650
(Escherichia coli 2009EL-2050)

0.0

23) O3O_21435
( YP_006782637.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter

NC_018661
(Escherichia coli 2009EL-2071)

0.0

24) O3K_04220
( YP_006777574.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter, CP4-44 prophage

NC_018658
(Escherichia coli 2011C-3493)

0.0

25) flu
( YP_002404320.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter; CP4-44 prophage

NC_011748
(Escherichia coli 55989)

0.0

26) i14_3351
( YP_006155430.1 )

antigen 43 precursor

NC_017652
(Escherichia coli clone D i14)

0.0

27) i02_3351
( YP_006150511.1 )

antigen 43 precursor

NC_017651
(Escherichia coli clone D i2)

0.0

28) ECABU_c33230
( YP_006107322.1 )

putative antigen 43

NC_017631
(Escherichia coli ABU 83972)

0.0

29) ECNA114_4551
( YP_006141674.1 )

Putative antigen 43 precursor

NC_017644
(Escherichia coli NA114)

0.0

30) Dd586_2894
( YP_003334434.1 )

outer membrane autotransporter barrel domain-containing protein

NC_013592
(Dickeya dadantii Ech586)

0.0

31) P12B_c3169
( YP_006170169.1 )

Antigen 43 precusor

NC_017663
(Escherichia coli P12b)

0.0

32) flu1
( YP_001744298.1 )

antigen 43

NC_010498
(Escherichia coli SMS-3-5)

0.0

33) flu2
( YP_001464349.1 )

antigen 43

NC_009801
(Escherichia coli E24377A)

0.0

34) flu
( YP_006100332.1 )

antigen 43

NC_017628
(Escherichia coli IHE3034)

0.0

35) UM146_12220
( YP_006111325.1 )

putative AidA-I adhesin-like protein

NC_017632
(Escherichia coli UM146)

0.0

36) UTI89_C1139
( YP_540153.1 )

autotransporter

NC_007946
(Escherichia coli UTI89)

0.0

37) flu1
( YP_001465820.1 )

antigen 43

NC_009801
(Escherichia coli E24377A)

0.0

38) flu
( YP_003045987.1 )

antigen 43 (Ag43) phase-variable biofilm formation autotransporter

NC_012967
(Escherichia coli REL606)

0.0

39) flu_1
( YP_008570983.1 )

Fluffing protein

NC_022370
(Escherichia coli PMV-1)

0.0

40) ECS88_4891
( YP_002394365.1 )

antigen 43 precursor (AG43) (Fluffing protein)

NC_011742
(Escherichia coli S88)

0.0

41) EC042_4803
( YP_006099048.1 )

putative adhesin autotransporter

NC_017626
(Escherichia coli 042)

0.0

42) O3M_00325
( YP_006767750.1 )

antigen 43 precursor (AG43, Fluffing protein)

NC_018650
(Escherichia coli 2009EL-2050)

0.0

43) O3O_25300
( YP_006781870.1 )

antigen 43 precursor (AG43)

NC_018661
(Escherichia coli 2009EL-2071)

0.0

44) O3K_00310
( YP_006776798.1 )

antigen 43 precursor (AG43, Fluffing protein)

NC_018658
(Escherichia coli 2011C-3493)

0.0

45) ROD_49731
( YP_003368339.1 )

adhesin autotransporter

NC_013716
(Citrobacter rodentium ICC168)

0.0

46) i14_4885a
( YP_006156941.1 )

antigen 43 precursor (AG43) (Fluffing protein)

NC_017652
(Escherichia coli clone D i14)

0.0

47) i02_4885a
( YP_006152022.1 )

antigen 43 precursor (AG43) (Fluffing protein)

NC_017651
(Escherichia coli clone D i2)

0.0

48) ECP_3009
( YP_670893.1 )

autotransporter

NC_008253
(Escherichia coli 536)

0.0

49) ECH74115_1395
( YP_002269864.1 )

pertactin family protein

NC_011353
(Escherichia coli EC4115)

0.0

50) ECs1396
( NP_309423.1 )

AidA-I

NC_002695
(Escherichia coli Sakai)

0.0

51) cah
( YP_003077239.1 )

calcium-binding autotransporter

NC_013008
(Escherichia coli TW14359)

0.0

52) UMNK88_1274
( YP_006133051.1 )

antigen 43 protein

NC_017641
(Escherichia coli UMNK88)

0.0

53) CDCO157_1332
( YP_006312203.1 )

AidA-I adhesin-like protein

NC_017906
(Escherichia coli Xuzhou21)

0.0

54) flu
( YP_006118001.1 )

putative antigen 43 precursor (fluffing protein)

NC_017633
(Escherichia coli ETEC H10407)

0.0

55) flu
( YP_003501136.1 )

type V secretory pathway, adhesin AidA

NC_013941
(Escherichia coli CB9615)

0.0

56) ECO55CA74_17450
( YP_006160606.1 )

type V secretory pathway, adhesin AidA

NC_017656
(Escherichia coli RM12579)

0.0

57) ECO26_1353
( YP_003228395.1 )

AidA-I adhesin

NC_013361
(Escherichia coli 11368)

0.0

58) Z1211
( NP_286746.1 )

adhesin

NC_002655
(Escherichia coli EDL933)

0.0

59) Z1651
( NP_287154.1 )

adhesin

NC_002655
(Escherichia coli EDL933)

0.0

60) ECO26_3415
( YP_003230356.1 )

AidA-I adhesin

NC_013361
(Escherichia coli 11368)

0.0

61) ECO103_4895
( YP_003224716.1 )

AidA-I adhesin-like protein

NC_013353
(Escherichia coli 12009)

0.0

62) UMNK88_3699
( YP_006135398.1 )

antigen 43 protein

NC_017641
(Escherichia coli UMNK88)

0.0

63) ETEC_2119
( YP_006115681.1 )

putative adhesin autotransporter

NC_017633
(Escherichia coli ETEC H10407)

0.0

64) CFSAN002050_05940
( YP_008259134.1 )

hypothetical protein

NC_021818
(Salmonella enterica CFSAN002050)

2e-178

• Sequence Alignments

1) flu in NC_017638


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1420 bits (5391),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 953/1006 (95%), Positives = 989/1006 (99%), Gaps = 0/1006 (0%)

Query  43    FIHPQSKEKLMKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGvavalslaavtslpv  102
             F+    KEKLMKRHLNT YRLVWNH+TG++VVASELAR+RGKR+GVAVALSLAAVTS+P 
Sbjct  16    FLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPA  75

Query  103   laaDIVVHPGETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTA  162
             LAAD VV++GETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTA
Sbjct  76    LAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTA  135

Query  163   NKTTVTSGGLQRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVIN  222
             N+TTVT+GGLQRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN
Sbjct  136   NNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVIN  195

Query  223   DKGWQVVKPGTVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTA  282
             +KGWQ +K+G+VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV AEGTA
Sbjct  196   EKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTA  255

Query  283   NTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVN  342
             NTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVN
Sbjct  256   NTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVN  315

Query  343   QKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLD  402
             QKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLD
Sbjct  316   QKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLD  375

Query  403   VLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGG  462
             VLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGG
Sbjct  376   VLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGG  435

Query  463   QADALMLEKGSSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNND  522
             QADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNND
Sbjct  436   QADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNND  495

Query  523   TLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDV  582
             TLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDV
Sbjct  496   TLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDV  555

Query  583   IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTR  642
             IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTR
Sbjct  556   IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTR  615

Query  643   TGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSAS  702
             TGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSAS
Sbjct  616   TGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSAS  675

Query  703   GLATSGKGIQVVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEV  762
             G+AT+GKGIQVVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEV
Sbjct  676   GMATTGKGIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEV  735

Query  763   PLYASMLTQAMDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESS  822
             PLYASMLTQAMDYDRI+AGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESS
Sbjct  736   PLYASMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESS  795

Query  823   GSYGFVRLEGDLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLN  882
             GSYGFVRLEGDL+RTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLN
Sbjct  796   GSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLN  855

Query  883   LVHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQ  942
             L+H +SGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQ
Sbjct  856   LIHNASGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQ  915

Query  943   YTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSV  1002
             YTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV
Sbjct  916   YTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSV  975

Query  1003  SELPVNWWVQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  1048
              ELPVNWWVQPSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  976   RELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

2) flu in NC_011751


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1418 bits (5381),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 977/996 (99%), Positives = 991/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDKVVQAG  60
             MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAAD VVQAG
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNDGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
             ETVNDGTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG  180
             QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQAIKSG
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
             AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFIQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYTSMLTQA  720
             VVEAINGATTEEGAF+QGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLY+SMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWA  840
             DLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  900
             DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GQDNAGYVKFGHGSAQHVRAGFRLGSHNDMSFGEGTSSRDTLRDSAKHRVRELPVNWWVQ  960
             G+DNAGYVKFGHGSAQHVRAGFRLGSHNDM+FGEGTSSRDTLR+SAKH VRELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLD  996
             PSVIRTFSSRGDMSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

3) flu1 in NC_017626


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1414 bits (5368),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 951/996 (96%), Positives = 986/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL  120
             ETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTAN+TTVT+GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
             QRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGD  240
             +VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV AEGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRILAGSRSHQTGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRILAGSRSHQTGV+GENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWA  840
             DLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLHYTWQGLSLDD  900
             DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQL+YTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GQDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNWWVQ  960
             G+DNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH+V ELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  996
             PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

4) ECO26_5486 in NC_013361


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1411 bits (5356),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 949/996 (96%), Positives = 984/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTSYRLVWNHMTGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNTSYRLVWNH+TG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL  120
             ETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTAN+TTVT+GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
             QRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRTEGTANTTVVYAGGD  240
             +VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV +EGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRI+AGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  840
             DL+RTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVALGTRHSMKASTDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  900
             DIVA GTRHSMKAS+DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

5) flu in NC_012759


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1410 bits (5353),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 948/996 (96%), Positives = 983/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNH+TG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL  120
             ETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTAN+TTVT+GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
             QRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGD  240
             +VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV AEGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRI+AGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWA  840
             DL+RTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  900
             DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

6) EcDH1_1657 in NC_017625


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1410 bits (5353),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 948/996 (96%), Positives = 983/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNH+TG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL  120
             ETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTAN+TTVT+GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
             QRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGD  240
             +VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV AEGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRI+AGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWA  840
             DL+RTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  900
             DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

7) flu in NC_010473


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1410 bits (5353),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 948/996 (96%), Positives = 983/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNH+TG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL  120
             ETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTAN+TTVT+GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
             QRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGD  240
             +VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV AEGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRI+AGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWA  840
             DL+RTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  900
             DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

8) flu in NC_000913


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1410 bits (5353),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 948/996 (96%), Positives = 983/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNH+TG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL  120
             ETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTAN+TTVT+GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
             QRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGD  240
             +VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV AEGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRI+AGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWA  840
             DL+RTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  900
             DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

9) flu in NC_007779


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1410 bits (5353),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 948/996 (96%), Positives = 983/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNH+TG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL  120
             ETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTAN+TTVT+GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
             QRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRAEGTANTTVVYAGGD  240
             +VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV AEGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRI+AGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWA  840
             DL+RTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  900
             DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

10) ECO26_2901 in NC_013361


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1409 bits (5346),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 948/996 (96%), Positives = 983/996 (99%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHMTGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNH+TG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLANHDNQIVFGTTNGMTISTGLEYGPDNEANTGGQWVQDGGTANKTTVTSGGL  120
             ETVN+GTL+NHDNQIVFGT+NGMTISTGLEYGPDNEANTGGQW+Q+GGTAN+TTVT+GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QRVNPGGSVSDTVISAGGGQSLQGRAVNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
             QRVNPGGSVSDTVISAGGGQSLQG+AVNTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   TVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINKNGRQIVRTEGTANTTVVYAGGD  240
             +VATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTINKNGRQIV +EGTANTTVVYAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  300
             QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  360
             GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  420
             RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  600
             TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRIVAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRI+AGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLMRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  840
             DL+RTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVALGTRHSMKASTDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  900
             DIVA GTRHSMKAS+DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

11) ECP_0332 in NC_008253


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1326 bits (5033),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 878/999 (88%), Positives = 942/999 (95%), Gaps = 1/999 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PGETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTAN  120
             +GETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTI  180
             G Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G A+GT+IN+ G Q+I
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAI  202

Query  181   KHGGLATGTIVNTGAEGGPESENVSTGQMVGGTAESTTINNNGRQVIWSSGVSRDTLIYT  240
             K G++AT+T+VNTGAEGGP++EN  TGQ V G A  TTIN+NGRQ++ + G +  T++Y+
Sbjct  203   KSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYA  262

Query  241   GGDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVVKAGGTAGNTTINQNGELKV  300
             GGDQTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V
Sbjct  263   GGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQV  322

Query  301   HAGGEASDVTQNTGGALVTSTAATVTGTNRLGAFSVVEGKADNVVLENGGRLDVLSGHTA  360
             +AGG A++VT + GGALVTSTAATVTG NRLGAFSVVEGKADNVVLENGGRLDVL+GHTA
Sbjct  323   DAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  382

Query  361   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALML  420
             TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALML
Sbjct  383   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  442

Query  421   EKGSSFTLNAGDTATDTTVNGGLFTARGGSLAGTTTLNNGAILTLSGKTVNNDTLTIREG  480
             EKGSSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGAILTLSGKTVNNDTLTIREG
Sbjct  443   EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG  502

Query  481   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  540
             DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA
Sbjct  503   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  562

Query  541   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  600
             LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA
Sbjct  563   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  622

Query  601   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGK  660
             TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GK
Sbjct  623   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGK  682

Query  661   GIQVVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  720
             GIQVVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML
Sbjct  683   GIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  742

Query  721   TQAMDYDRILAGSRSHQTGVNVKNNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  780
             TQAMDYDRILAGSRSHQTGVN  NNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR
Sbjct  743   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  802

Query  781   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSG  840
             LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SG
Sbjct  803   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  862

Query  841   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  900
             LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS
Sbjct  863   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  922

Query  901   LDDGQDNAGYVKFGHGSAQHVRAGFRLGSHSDMTFGEGTSSRDTLRDSAKHSVRELPVNW  960
             LDDG+DNAGYVKFGHGSAQHVRAGFRLGSH+DMTFGEGTSSRDTLR+SAKHSVRELPVNW
Sbjct  923   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNW  982

Query  961   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  999
             WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD
Sbjct  983   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

12) flu in NC_017328


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1311 bits (4975),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 885/999 (89%), Positives = 950/999 (96%), Gaps = 1/999 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARAQGKRGGvavalslaavtslpvlaaDIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR++GKR+GVAVALSLAAVTS+P LAAD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PGETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTAN  120
             +GETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTI  180
             G Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G A+GT+IN+ G Q+I
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAI  202

Query  181   KHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYA  240
             K G++AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YA
Sbjct  203   KSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYA  262

Query  241   GGDQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKGKLQV  300
             GGDQTVHG+A +T L+GG QYVHNGGTA+ T++N DGWQ++K+GG A++TT+NQKG+LQV
Sbjct  263   GGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQV  322

Query  301   NAGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  360
             +AGG A++VT + GGALVTSTAATVTG NRLGAFSVVEGKADNVVLENGGRLDVLTGHTA
Sbjct  323   DAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  382

Query  361   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  420
             TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML
Sbjct  383   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  442

Query  421   EKGSSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREG  480
             EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG
Sbjct  443   EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG  502

Query  481   DALLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  540
             DALLQGG+LTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA
Sbjct  503   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  562

Query  541   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  600
             LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA
Sbjct  563   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  622

Query  601   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGK  660
             TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GK
Sbjct  623   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGK  682

Query  661   GIQVVEAINGATTEEGAFIQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  720
             GIQVVEAINGATTEEGAF+QGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML
Sbjct  683   GIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  742

Query  721   TQAMDYDRILAGSRSHQTGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  780
             TQAMDYDRILAGSRSHQTGV+GENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR
Sbjct  743   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  802

Query  781   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  840
             LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG
Sbjct  803   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  862

Query  841   LWADIVAQGTRHSMKASSDNNDFRVRGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  900
             LWADIVAQGTRHSMKASSDNNDFR RGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS
Sbjct  863   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  922

Query  901   LDDGQDNASYVKFGHGSAQHVRAGFRLGSHHDMNFGKGTSSRDTLRGSAKHSVRELPVNW  960
             LDDG+DNA+YVKFGHGSAQHVRAGFRLGSH+DM FG GTSSRDTLRGSAKHSVRELPVNW
Sbjct  923   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNW  982

Query  961   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  999
             WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD
Sbjct  983   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

13) SF2991 in NC_004337


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1311 bits (4975),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 885/999 (89%), Positives = 950/999 (96%), Gaps = 1/999 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARAQGKRGGvavalslaavtslpvlaaDIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR++GKR+GVAVALSLAAVTS+P LAAD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PGETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTAN  120
             +GETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTI  180
             G Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G A+GT+IN+ G Q+I
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAI  202

Query  181   KHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYA  240
             K G++AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YA
Sbjct  203   KSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYA  262

Query  241   GGDQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKGKLQV  300
             GGDQTVHG+A +T L+GG QYVHNGGTA+ T++N DGWQ++K+GG A++TT+NQKG+LQV
Sbjct  263   GGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQV  322

Query  301   NAGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  360
             +AGG A++VT + GGALVTSTAATVTG NRLGAFSVVEGKADNVVLENGGRLDVLTGHTA
Sbjct  323   DAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  382

Query  361   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  420
             TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML
Sbjct  383   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  442

Query  421   EKGSSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREG  480
             EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG
Sbjct  443   EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG  502

Query  481   DALLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  540
             DALLQGG+LTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA
Sbjct  503   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  562

Query  541   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  600
             LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA
Sbjct  563   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  622

Query  601   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGK  660
             TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GK
Sbjct  623   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGK  682

Query  661   GIQVVEAINGATTEEGAFIQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  720
             GIQVVEAINGATTEEGAF+QGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML
Sbjct  683   GIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  742

Query  721   TQAMDYDRILAGSRSHQTGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  780
             TQAMDYDRILAGSRSHQTGV+GENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR
Sbjct  743   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  802

Query  781   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  840
             LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG
Sbjct  803   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  862

Query  841   LWADIVAQGTRHSMKASSDNNDFRVRGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  900
             LWADIVAQGTRHSMKASSDNNDFR RGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS
Sbjct  863   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  922

Query  901   LDDGQDNASYVKFGHGSAQHVRAGFRLGSHHDMNFGKGTSSRDTLRGSAKHSVRELPVNW  960
             LDDG+DNA+YVKFGHGSAQHVRAGFRLGSH+DM FG GTSSRDTLRGSAKHSVRELPVNW
Sbjct  923   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNW  982

Query  961   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  999
             WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD
Sbjct  983   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

14) c3655 in NC_004431


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1297 bits (4921),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 869/999 (87%), Positives = 945/999 (95%), Gaps = 1/999 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtplpvlSADIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVT++P L+AD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PGETVNGGTLVNHDNQFVSGTANGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTAN  120
             +GETVN+GTL NHDNQ+V GTANG+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTI  180
             G Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G A+GT+IN+ G Q+I
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAI  202

Query  181   KHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYA  240
             K G++AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YA
Sbjct  203   KSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYA  262

Query  241   GGDQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKGKLQV  300
             GGDQTVHG+A +T L+GG QYVHNGGTA+ T++N DGWQ++K+GG A++TT+NQKG+LQV
Sbjct  263   GGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQV  322

Query  301   NAGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVVAGKADNVVLENGGRLDVLSGHTA  360
             +AGG A++VT + GGALVTSTAATVTG NRLGAFSVV GKADNVVLENGGRLDVL+GHTA
Sbjct  323   DAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  382

Query  361   TNTRVDDGGTLDIRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  420
             TNTRVDDGGTLD+RNGG+ATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML
Sbjct  383   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  442

Query  421   EKGSSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREG  480
             EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG
Sbjct  443   EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG  502

Query  481   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  540
             DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA
Sbjct  503   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  562

Query  541   LKLTGSTVLNGAIDPTNVTLASDATWNIPDNATVQSVVDDLSHAGQIHFTSSRTGTFVPA  600
             LKLTGSTVLNGAIDPTNVTLAS+ATWNIPDNATVQSVVDDLSHAGQIHFTS+RTG FVPA
Sbjct  563   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  622

Query  601   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGK  660
             TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GK
Sbjct  623   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGK  682

Query  661   GIQVVEAINGATTEEGAFVQGNRLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  720
             GIQVVEAINGATTEEGAFVQGN+LQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML
Sbjct  683   GIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  742

Query  721   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  780
             TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR
Sbjct  743   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  802

Query  781   LEGDLLRTDVAGMSVTAGIYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSG  840
             LEGDLLRT+VAGMSVTAG+YGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +SG
Sbjct  803   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  862

Query  841   LWADIVAQGTRHSMKASSGNNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGLS  900
             LWADIVAQGTRHSMKASS+NNDFRARG+GWLGSLETGLPFSITDNLMLEP+LQYTWQGLS
Sbjct  863   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  922

Query  901   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNW  960
             LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVNW
Sbjct  923   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNW  982

Query  961   WVQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  999
             WVQPSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  983   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

15) flu2 in NC_017626


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1291 bits (4899),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 859/998 (87%), Positives = 935/998 (94%), Gaps = 0/998 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PGETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDDNTGGQQIARGGTARNTTVTAN  120
             +GETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQ I  GGTA NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GLQDVMAGGSATDTVISAGGGQNLRGQAYGTVLNGGEQWIHAGGSASGTVINQSGYQTIK  180
             GLQ V +GGS +DTVISAGGGQ+L+GQA  T LNGGEQW+H +G A+GTVIN+ G Q+IK
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIK  203

Query  181   HGGQATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAG  240
              G+ AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YAG
Sbjct  204   SGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAG  263

Query  241   GDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVIKEGGTTAHTTINQKGKLQVN  300
             GDQTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ++K+GG +++TT+NQKG+LQV+
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVD  323

Query  301   AGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVLAGKADNVVLENGGRLDVLSGHTAT  360
             AGG A++VT + GGALVTSTAATVTG NRLGAFSV+ GKADNVVLENGGRLDVL+GHTAT
Sbjct  324   AGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTAT  383

Query  361   NTRVDDGGTLDVRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALMLE  420
             NTRVDDGGTLDVRNGG+ATTVSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALMLE
Sbjct  384   NTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLE  443

Query  421   KGSSFTLNAGDTATDTTVNGGLFTARGGSlagtttlnngatltlSGKTVNNDTLTIREGD  480
             KGSSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGA LTLSGKTVNNDTLTIREGD
Sbjct  444   KGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGD  503

Query  481   ALLQGGALTGNGRVEKSGSGTLTVSNTTLTQKTVNLNEGTLTLNDSTVTTDVIAQRGTAL  540
             ALLQGG+LTGNG VEKSGSGTLTVSNTTLTQK+VNLNEGTLTLNDSTVTTDVIAQRGTAL
Sbjct  504   ALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTAL  563

Query  541   KLTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT  600
             KLTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT
Sbjct  564   KLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT  623

Query  601   LQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGKG  660
             L+VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGKG
Sbjct  624   LKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKG  683

Query  661   IQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLT  720
             IQVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASMLT
Sbjct  684   IQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLT  743

Query  721   QAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL  780
             QAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL
Sbjct  744   QAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL  803

Query  781   EGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSGL  840
             EGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +SGL
Sbjct  804   EGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGL  863

Query  841   WADIVAQGTRHSMKASSGNNDFRARGWGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSL  900
             WADIVAQGTRHSMKASS+NNDFRARGWGWLGSLETGLPFSITDNLMLEP+LQYTWQGLSL
Sbjct  864   WADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSL  923

Query  901   DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWW  960
             DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVNWW
Sbjct  924   DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWW  983

Query  961   VQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  998
             VQPSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  984   VQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

16) flu in NC_011745


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1289 bits (4891),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 862/999 (87%), Positives = 938/999 (94%), Gaps = 1/999 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVVSELARTRGKRGGvavalslaavtslpvlsaDIVVH  60
              LMKRHLNT YRLVWNHITG++VV SELAR+RGKR+GVAVALSLAAVTS+P L+AD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PGETVNGGTLVNHDNQFVSGTANGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTAN  120
             +GETVN+GTL NHDNQ+V GTANG+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGEGKATGTIINQDGYQTI  180
             G Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G ATGT+IN+ G Q+I
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAI  202

Query  181   KHGGLATGTIVNTGAEGGPESENVSTGQMVGGTAESTTINNNGRQVIWSSGVSRDTLIYT  240
             K G++AT+T+VNTGAEGGP++EN  TGQ V G A  TTIN+NGRQ++ + G +  T++Y+
Sbjct  203   KSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYA  262

Query  241   GGDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVVKAGGTAGNTTINQNGELKV  300
             GGDQTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V
Sbjct  263   GGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQV  322

Query  301   HAGGEASDVTQNTGGALVTSTAATVTGTNRLGAFSVVAGKADNVVLENGGRLDVLSGHTA  360
             +AGG A++VT + GGALVTSTAATVTG NRLGAFSVV GKADNVVLENGGRLDVL+GHTA
Sbjct  323   DAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  382

Query  361   TNTRVDDGGTLDVRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALML  420
             TNTRVDDGGTLDVRNGG+ATTVSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALML
Sbjct  383   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  442

Query  421   EKGSSFTLNAGDTATDTTVNGGLLTARGGSlagtttlnngatltlSGKTVNNDTLTIREG  480
             EKGSSFTLNAGDTATDTTVNGGL+TARGG+LAGTTTLNNGA LTLSGKTVNNDTLTIREG
Sbjct  443   EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG  502

Query  481   DALLQGGTLTGNGRVEKSGSGTLTVSNTTLTQKTVNLNEGTLTLNDSTVTTDVIAQRGTT  540
             DALLQGG+LTGNG VEKSGSGTLTVSNTTLTQK+VNLNEGTLTLNDSTVTTDVIAQRGT+
Sbjct  503   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  562

Query  541   LKLTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVPT  600
             LKLTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP+
Sbjct  563   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  622

Query  601   TLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGK  660
             TL+VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGK
Sbjct  623   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGK  682

Query  661   GIQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASML  720
             GIQVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASML
Sbjct  683   GIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  742

Query  721   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  780
             TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR
Sbjct  743   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  802

Query  781   LEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSG  840
             LEGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SG
Sbjct  803   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  862

Query  841   LWADIVAQGTRHSMKASSDNNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGLS  900
             LWADIVAQGTRHSMKASSDNNDFRARG+GWLGSLETGLPFSITDNLMLEP+LQYTWQGLS
Sbjct  863   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  922

Query  901   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVRELPVNW  960
             LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSVRELPVNW
Sbjct  923   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNW  982

Query  961   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  999
             WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD
Sbjct  983   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

17) c1273 in NC_004431


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1286 bits (4879),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 857/1000 (86%), Positives = 933/1000 (94%), Gaps = 0/1000 (0%)

Query  49    KEMLMKRHLNTSYRLVWNHITGAFVVASELarargkragvavalslaaatslpalaaDSV  108
             KE LMKRHLNTSYRLVWNHITG++VVASELAR+RGKRAGVAVALSLAA TS+PALAAD+V
Sbjct  22    KEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTV  81

Query  109   VPAGETVNGGTLINHDRQFVSGTADGMTVSTGLELGADSDNNTGGQQIARGGTARNTRVT  168
             V AGETVN+GTL NHD Q+V GTA+GMT+STGLE G+D++ NTGGQ I  GGTA NT VT
Sbjct  82    VQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVT  141

Query  169   ANGLQDVMAGGSTSDTVISTGGGQNLRGKASGTVLNGGDQWIHAGGRASGTVINQDGYQT  228
             + GLQ V +GGS SDTVIS+GGGQ+L+G+A  T LNGG+QW+H +G A+GTVIN+ G Q+
Sbjct  142   GGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQA  201

Query  229   IKHGGLVTGTIVNTGAEGGPDSENVSTGQMVGGIAESTTINKNGRQVIWSSGIARDTLIY  288
             IK G++ T+T+VNTGAEGGPD+EN  TGQ V G A  TTINKNGRQ++ + G A  T++Y
Sbjct  202   IKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVY  261

Query  289   TGGDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVVKAGGTAGNTTINQNGELR  348
             +GGDQTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+
Sbjct  262   AGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQ  321

Query  349   VHAGGEASDVTQNTGGALVTSTAATVTGTNRLGAFSVVEGKADNVVLENGGRLDVLSGHT  408
             V+AGG A++VT + GGALVTSTAATVTG NRLGAFSVVEGKADNVVLENGGRLDVL+GHT
Sbjct  322   VDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHT  381

Query  409   ATRTLVDDGGTLDVRNGGTATAVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALM  468
             AT T VDDGGTLDVRNGGTAT+VSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALM
Sbjct  382   ATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALM  441

Query  469   LEKGSSFTLNAGDTATDTTVNGGLFTARGGSLAGTTTLNNGATFTLAGKTVNNDTLTIRE  528
             LEKGSSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGA +TL+GKTVNNDTLTIRE
Sbjct  442   LEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIRE  501

Query  529   GDALLQGGALTGNGRVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDIIAHRGT  588
             GDALLQGG+LTGNG VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTD+IA+RGT
Sbjct  502   GDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGT  561

Query  589   ALKLTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVP  648
             ALKLTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP
Sbjct  562   ALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVP  621

Query  649   TTLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTG  708
             +TL+VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTG
Sbjct  622   ATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTG  681

Query  709   KGIQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASM  768
             KGIQVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASM
Sbjct  682   KGIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASM  741

Query  769   LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV  828
             LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV
Sbjct  742   LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV  801

Query  829   RLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSS  888
             RLEGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +S
Sbjct  802   RLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNAS  861

Query  889   GLWADIVAQGTRHSMKASSDNNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGL  948
             GLWADIVAQGTRHSMKASSDNNDFRARG+GWLGSLETGLPFSITDNLMLEP+LQYTWQGL
Sbjct  862   GLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGL  921

Query  949   SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVN  1008
             SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVN
Sbjct  922   SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVN  981

Query  1009  WWVQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  1048
             WWVQPSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  982   WWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

18) i14_1166 in NC_017652


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1286 bits (4879),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 857/1000 (86%), Positives = 933/1000 (94%), Gaps = 0/1000 (0%)

Query  49    KEMLMKRHLNTSYRLVWNHITGAFVVASELarargkragvavalslaaatslpalaaDSV  108
             KE LMKRHLNTSYRLVWNHITG++VVASELAR+RGKRAGVAVALSLAA TS+PALAAD+V
Sbjct  22    KEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTV  81

Query  109   VPAGETVNGGTLINHDRQFVSGTADGMTVSTGLELGADSDNNTGGQQIARGGTARNTRVT  168
             V AGETVN+GTL NHD Q+V GTA+GMT+STGLE G+D++ NTGGQ I  GGTA NT VT
Sbjct  82    VQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVT  141

Query  169   ANGLQDVMAGGSTSDTVISTGGGQNLRGKASGTVLNGGDQWIHAGGRASGTVINQDGYQT  228
             + GLQ V +GGS SDTVIS+GGGQ+L+G+A  T LNGG+QW+H +G A+GTVIN+ G Q+
Sbjct  142   GGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQA  201

Query  229   IKHGGLVTGTIVNTGAEGGPDSENVSTGQMVGGIAESTTINKNGRQVIWSSGIARDTLIY  288
             IK G++ T+T+VNTGAEGGPD+EN  TGQ V G A  TTINKNGRQ++ + G A  T++Y
Sbjct  202   IKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVY  261

Query  289   TGGDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVVKAGGTAGNTTINQNGELR  348
             +GGDQTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+
Sbjct  262   AGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQ  321

Query  349   VHAGGEASDVTQNTGGALVTSTAATVTGTNRLGAFSVVEGKADNVVLENGGRLDVLSGHT  408
             V+AGG A++VT + GGALVTSTAATVTG NRLGAFSVVEGKADNVVLENGGRLDVL+GHT
Sbjct  322   VDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHT  381

Query  409   ATRTLVDDGGTLDVRNGGTATAVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALM  468
             AT T VDDGGTLDVRNGGTAT+VSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALM
Sbjct  382   ATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALM  441

Query  469   LEKGSSFTLNAGDTATDTTVNGGLFTARGGSLAGTTTLNNGATFTLAGKTVNNDTLTIRE  528
             LEKGSSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGA +TL+GKTVNNDTLTIRE
Sbjct  442   LEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIRE  501

Query  529   GDALLQGGALTGNGRVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDIIAHRGT  588
             GDALLQGG+LTGNG VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTD+IA+RGT
Sbjct  502   GDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGT  561

Query  589   ALKLTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVP  648
             ALKLTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP
Sbjct  562   ALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVP  621

Query  649   TTLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTG  708
             +TL+VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTG
Sbjct  622   ATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTG  681

Query  709   KGIQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASM  768
             KGIQVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASM
Sbjct  682   KGIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASM  741

Query  769   LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV  828
             LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV
Sbjct  742   LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV  801

Query  829   RLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSS  888
             RLEGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +S
Sbjct  802   RLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNAS  861

Query  889   GLWADIVAQGTRHSMKASSDNNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGL  948
             GLWADIVAQGTRHSMKASSDNNDFRARG+GWLGSLETGLPFSITDNLMLEP+LQYTWQGL
Sbjct  862   GLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGL  921

Query  949   SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVN  1008
             SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVN
Sbjct  922   SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVN  981

Query  1009  WWVQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  1048
             WWVQPSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  982   WWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

19) i02_1166 in NC_017651


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1286 bits (4879),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 857/1000 (86%), Positives = 933/1000 (94%), Gaps = 0/1000 (0%)

Query  49    KEMLMKRHLNTSYRLVWNHITGAFVVASELarargkragvavalslaaatslpalaaDSV  108
             KE LMKRHLNTSYRLVWNHITG++VVASELAR+RGKRAGVAVALSLAA TS+PALAAD+V
Sbjct  22    KEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTV  81

Query  109   VPAGETVNGGTLINHDRQFVSGTADGMTVSTGLELGADSDNNTGGQQIARGGTARNTRVT  168
             V AGETVN+GTL NHD Q+V GTA+GMT+STGLE G+D++ NTGGQ I  GGTA NT VT
Sbjct  82    VQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVT  141

Query  169   ANGLQDVMAGGSTSDTVISTGGGQNLRGKASGTVLNGGDQWIHAGGRASGTVINQDGYQT  228
             + GLQ V +GGS SDTVIS+GGGQ+L+G+A  T LNGG+QW+H +G A+GTVIN+ G Q+
Sbjct  142   GGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQA  201

Query  229   IKHGGLVTGTIVNTGAEGGPDSENVSTGQMVGGIAESTTINKNGRQVIWSSGIARDTLIY  288
             IK G++ T+T+VNTGAEGGPD+EN  TGQ V G A  TTINKNGRQ++ + G A  T++Y
Sbjct  202   IKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVY  261

Query  289   TGGDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVVKAGGTAGNTTINQNGELR  348
             +GGDQTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+
Sbjct  262   AGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQ  321

Query  349   VHAGGEASDVTQNTGGALVTSTAATVTGTNRLGAFSVVEGKADNVVLENGGRLDVLSGHT  408
             V+AGG A++VT + GGALVTSTAATVTG NRLGAFSVVEGKADNVVLENGGRLDVL+GHT
Sbjct  322   VDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHT  381

Query  409   ATRTLVDDGGTLDVRNGGTATAVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALM  468
             AT T VDDGGTLDVRNGGTAT+VSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALM
Sbjct  382   ATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALM  441

Query  469   LEKGSSFTLNAGDTATDTTVNGGLFTARGGSLAGTTTLNNGATFTLAGKTVNNDTLTIRE  528
             LEKGSSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGA +TL+GKTVNNDTLTIRE
Sbjct  442   LEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIRE  501

Query  529   GDALLQGGALTGNGRVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDIIAHRGT  588
             GDALLQGG+LTGNG VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTD+IA+RGT
Sbjct  502   GDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGT  561

Query  589   ALKLTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVP  648
             ALKLTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP
Sbjct  562   ALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVP  621

Query  649   TTLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTG  708
             +TL+VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTG
Sbjct  622   ATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTG  681

Query  709   KGIQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASM  768
             KGIQVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASM
Sbjct  682   KGIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASM  741

Query  769   LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV  828
             LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV
Sbjct  742   LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV  801

Query  829   RLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSS  888
             RLEGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +S
Sbjct  802   RLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNAS  861

Query  889   GLWADIVAQGTRHSMKASSDNNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGL  948
             GLWADIVAQGTRHSMKASSDNNDFRARG+GWLGSLETGLPFSITDNLMLEP+LQYTWQGL
Sbjct  862   GLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGL  921

Query  949   SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVN  1008
             SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVN
Sbjct  922   SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVN  981

Query  1009  WWVQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  1048
             WWVQPSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  982   WWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

20) flu in NC_011751


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1285 bits (4874),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 873/997 (88%), Positives = 937/997 (94%), Gaps = 0/997 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PGETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDDNTGGQQIARGGTARNTTVTAN  120
             +GETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQ I  GGTA NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GLQDVMAGGSATDTVISAGGGQNLRGQAYGTVLNGGEQWIHAGGSASGTVINQSGYQTIK  180
             GLQ V +GGS +DTVISAGGGQ+L+GQA  T LNGGEQW+H +G A+GTVIN+ G Q+IK
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIK  203

Query  181   HGGQATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAG  240
              G+ AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YAG
Sbjct  204   SGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAG  263

Query  241   GDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVVKAGGTAGNTTINQNGELKVH  300
             GDQTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V+
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVD  323

Query  301   AGGEASDVTQNTGGALVTSTAATVTGTNRLGAFSVVAGKADNVVLENGGRLDVLSGHTAT  360
             AGG A++VT + GGALVTSTAATVTG NRLGAFSVV GKADNVVLENGGRLDVL+GHTAT
Sbjct  324   AGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTAT  383

Query  361   NTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLE  420
             NTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLE
Sbjct  384   NTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLE  443

Query  421   KGSSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGD  480
             KGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGD
Sbjct  444   KGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGD  503

Query  481   ALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTAL  540
             ALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTAL
Sbjct  504   ALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTAL  563

Query  541   KLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT  600
             KLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT
Sbjct  564   KLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT  623

Query  601   LKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKG  660
             LKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKG
Sbjct  624   LKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKG  683

Query  661   IQVVEAINGATTEEGAFIQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLT  720
             IQVVEAINGATTEEGAF+QGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLT
Sbjct  684   IQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLT  743

Query  721   QAMDYDRILAGSRSHQTGVNGENNSARLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL  780
             QAMDYDRILAGSRSHQTGVNGENNS RLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL
Sbjct  744   QAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL  803

Query  781   EGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSGL  840
             EGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +SGL
Sbjct  804   EGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGL  863

Query  841   WADIVAQGTRHSMKASSGNNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSL  900
             WADIVAQGTRHSMKASS+NNDFRARG+GWLGSLETGLPFSITDNLMLEP+LQYTWQGLSL
Sbjct  864   WADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSL  923

Query  901   DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWW  960
             DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVNWW
Sbjct  924   DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWW  983

Query  961   VQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSL  997
             VQPSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSL
Sbjct  984   VQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSL  1020

21) ECABU_c12300 in NC_017631


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1285 bits (4877),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 854/996 (86%), Positives = 930/996 (94%), Gaps = 0/996 (0%)

Query  1     MKRHLNTSYRLVWNHITGAFVVASELarargkragvavalslaaatslpalaaDSVVPAG  60
             MKRHLNTSYRLVWNHITG++VVASELAR+RGKRAGVAVALSLAA TS+PALAAD+VV AG
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLINHDRQFVSGTADGMTVSTGLELGADSDNNTGGQQIARGGTARNTRVTANGL  120
             ETVN+GTL NHD Q+V GTA+GMT+STGLE G+D++ NTGGQ I  GGTA NT VT+ GL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QDVMAGGSTSDTVISTGGGQNLRGKASGTVLNGGDQWIHAGGRASGTVINQDGYQTIKHG  180
             Q V +GGS SDTVIS+GGGQ+L+G+A  T LNGG+QW+H +G A+GTVIN+ G Q+IK G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   GLVTGTIVNTGAEGGPDSENVSTGQMVGGIAESTTINKNGRQVIWSSGIARDTLIYTGGD  240
             ++ T+T+VNTGAEGGPD+EN  TGQ V G A  TTINKNGRQ++ + G A  T++Y+GGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVVKAGGTAGNTTINQNGELRVHAG  300
             QTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V+AG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GEASDVTQNTGGALVTSTAATVTGTNRLGAFSVVEGKADNVVLENGGRLDVLSGHTATRT  360
             G A++VT + GGALVTSTAATVTG NRLGAFSVVEGKADNVVLENGGRLDVL+GHTAT T
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   LVDDGGTLDVRNGGTATAVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALMLEKG  420
              VDDGGTLDVRNGGTAT+VSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNGGLFTARGGSLAGTTTLNNGATFTLAGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGA +TL+GKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGALTGNGRVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDIIAHRGTALKL  540
             LQGG+LTGNG VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTD+IA+RGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVPTTLQ  600
             TGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP+TL+
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGKGIQ  660
             VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSGLWA  840
             DLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSDNNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSLDD  900
             DIVAQGTRHSMKASSDNNDFRARG+GWLGSLETGLPFSITDNLMLEP+LQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

22) O3M_04255 in NC_018650


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1283 bits (4866),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 857/996 (87%), Positives = 933/996 (94%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDDNTGGQQIARGGTARNTTVTANGL  120
             ETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQ I  GGTA NTTVT+ GL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QDVMAGGSATDTVISAGGGQNLRGQAYGTVLNGGEQWIHAGGSASGTVINQSGYQTIKHG  180
             Q V +GGS +DTVISAGGGQ+L+GQA  T LNGGEQW+H +G A+GTVIN+ G Q+IK G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   GQATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGGD  240
             + AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVIKEGGTTAHTTINQKGKLQVNAG  300
             QTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ++K+GG +++TT+NQKG+LQV+AG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GKASDVTQNTGGALVTSTAATVTGTNRLGAFSVLAGKADNVVLENGGRLDVLSGHTATNT  360
             G A++VT + GGALVTSTAATVTG NRLGAFSV+ GKADNVVLENGGRLDVL+GHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALMLEKG  420
             RVDDGGTLDVRNGG+ATTVSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNGGLFTARGGSlagtttlnngatltlSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGA LTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGALTGNGRVEKSGSGTLTVSNTTLTQKTVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGG+LTGNG VEKSGSGTLTVSNTTLTQK+VNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLQ  600
             TGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATL+
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVCPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGKGIQ  660
             VKNLNGQNGTISLRV PDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSGLWA  840
             DLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSGNNDFRARGWGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSLDD  900
             DIVAQGTRHSMKASS+NNDFRARGWGWLGSLETGLPFSITDNLMLEP+LQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

23) O3O_21435 in NC_018661


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1283 bits (4866),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 857/996 (87%), Positives = 933/996 (94%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDDNTGGQQIARGGTARNTTVTANGL  120
             ETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQ I  GGTA NTTVT+ GL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QDVMAGGSATDTVISAGGGQNLRGQAYGTVLNGGEQWIHAGGSASGTVINQSGYQTIKHG  180
             Q V +GGS +DTVISAGGGQ+L+GQA  T LNGGEQW+H +G A+GTVIN+ G Q+IK G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   GQATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGGD  240
             + AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVIKEGGTTAHTTINQKGKLQVNAG  300
             QTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ++K+GG +++TT+NQKG+LQV+AG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GKASDVTQNTGGALVTSTAATVTGTNRLGAFSVLAGKADNVVLENGGRLDVLSGHTATNT  360
             G A++VT + GGALVTSTAATVTG NRLGAFSV+ GKADNVVLENGGRLDVL+GHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALMLEKG  420
             RVDDGGTLDVRNGG+ATTVSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNGGLFTARGGSlagtttlnngatltlSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGA LTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGALTGNGRVEKSGSGTLTVSNTTLTQKTVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGG+LTGNG VEKSGSGTLTVSNTTLTQK+VNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLQ  600
             TGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATL+
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVCPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGKGIQ  660
             VKNLNGQNGTISLRV PDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSGLWA  840
             DLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSGNNDFRARGWGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSLDD  900
             DIVAQGTRHSMKASS+NNDFRARGWGWLGSLETGLPFSITDNLMLEP+LQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

24) O3K_04220 in NC_018658


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1283 bits (4866),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 857/996 (87%), Positives = 933/996 (94%), Gaps = 0/996 (0%)

Query  1     MKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPG  60
             MKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDDNTGGQQIARGGTARNTTVTANGL  120
             ETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQ I  GGTA NTTVT+ GL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QDVMAGGSATDTVISAGGGQNLRGQAYGTVLNGGEQWIHAGGSASGTVINQSGYQTIKHG  180
             Q V +GGS +DTVISAGGGQ+L+GQA  T LNGGEQW+H +G A+GTVIN+ G Q+IK G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181   GQATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGGD  240
             + AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YAGGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241   QTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVIKEGGTTAHTTINQKGKLQVNAG  300
             QTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ++K+GG +++TT+NQKG+LQV+AG
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301   GKASDVTQNTGGALVTSTAATVTGTNRLGAFSVLAGKADNVVLENGGRLDVLSGHTATNT  360
             G A++VT + GGALVTSTAATVTG NRLGAFSV+ GKADNVVLENGGRLDVL+GHTATNT
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361   RVDDGGTLDVRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALMLEKG  420
             RVDDGGTLDVRNGG+ATTVSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALMLEKG
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  421   SSFTLNAGDTATDTTVNGGLFTARGGSlagtttlnngatltlSGKTVNNDTLTIREGDAL  480
             SSFTLNAGDTATDTTVNGGLFTARGG+LAGTTTLNNGA LTLSGKTVNNDTLTIREGDAL
Sbjct  446   SSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDAL  505

Query  481   LQGGALTGNGRVEKSGSGTLTVSNTTLTQKTVNLNEGTLTLNDSTVTTDVIAQRGTALKL  540
             LQGG+LTGNG VEKSGSGTLTVSNTTLTQK+VNLNEGTLTLNDSTVTTDVIAQRGTALKL
Sbjct  506   LQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKL  565

Query  541   TGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLQ  600
             TGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATL+
Sbjct  566   TGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLK  625

Query  601   VKNLNGQNGTISLRVCPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGKGIQ  660
             VKNLNGQNGTISLRV PDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGKGIQ
Sbjct  626   VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQ  685

Query  661   VVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLTQA  720
             VVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASMLTQA
Sbjct  686   VVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQA  745

Query  721   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  780
             MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG
Sbjct  746   MDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEG  805

Query  781   DLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSGLWA  840
             DLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +SGLWA
Sbjct  806   DLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWA  865

Query  841   DIVAQGTRHSMKASSGNNDFRARGWGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSLDD  900
             DIVAQGTRHSMKASS+NNDFRARGWGWLGSLETGLPFSITDNLMLEP+LQYTWQGLSLDD
Sbjct  866   DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDD  925

Query  901   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWWVQ  960
             GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVNWWVQ
Sbjct  926   GKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQ  985

Query  961   PSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  996
             PSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  986   PSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

25) flu in NC_011748


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1282 bits (4863),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 865/998 (87%), Positives = 936/998 (94%), Gaps = 0/998 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PGETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDDNTGGQQIARGGTARNTTVTAN  120
             +GETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQ I  GGTA NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GLQDVMAGGSATDTVISAGGGQNLRGQAYGTVLNGGEQWIHAGGSASGTVINQSGYQTIK  180
             GLQ V +GGS +DTVISAGGGQ+L+GQA  T LNGGEQW+H +G A+GTVIN+ G Q+IK
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIK  203

Query  181   HGGQATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAG  240
              G+ AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YAG
Sbjct  204   SGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAG  263

Query  241   GDQTVHGEAHNTRLEGGNQYVHKYGLALNTVINEGGWQVIKEGGTTAHTTINQKGKLQVN  300
             GDQTVHG+A +T L+GG QYVH+ G A  TV+N +GWQ++K+GG +++TT+NQKG+LQV+
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVD  323

Query  301   AGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVLAGKADNVVLENGGRLDVLSGHTAT  360
             AGG A++VT + GGALVTSTAATVTG NRLGAFSV+ GKADNVVLENGGRLDVL+GHTAT
Sbjct  324   AGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTAT  383

Query  361   NTRVDDGGTLDVRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALMLE  420
             NTRVDDGGTLDVRNGG+ATTVSMGNGGVLLADSGAAVSGTRSDG AF IGGGQADALMLE
Sbjct  384   NTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLE  443

Query  421   KGSSFTLNAGDTATDTTVNgglftarggtlagtttlnngaILTLSGKTVNNDTLTIREGD  480
             KGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGD
Sbjct  444   KGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGD  503

Query  481   ALLQGGALTGNGRVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTAL  540
             ALLQGG+LTGNG VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTAL
Sbjct  504   ALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTAL  563

Query  541   KLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT  600
             KLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT
Sbjct  564   KLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPAT  623

Query  601   LKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGLATSGKG  660
             LKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASG+AT+GKG
Sbjct  624   LKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKG  683

Query  661   IQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLT  720
             IQVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSE+ YRAEVPLYASMLT
Sbjct  684   IQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLT  743

Query  721   QAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL  780
             QAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL
Sbjct  744   QAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRL  803

Query  781   EGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYMNLTHTSSGL  840
             EGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY+NL H +SGL
Sbjct  804   EGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGL  863

Query  841   WADIVAQGTRHSMKASSGNNDFRARGWGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSL  900
             WADIVAQGTRHSMKASS+NNDFRARGWGWLGSLETGLPFSITDNLMLEP+LQYTWQGLSL
Sbjct  864   WADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSL  923

Query  901   DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWW  960
             DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSVRELPVNWW
Sbjct  924   DDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWW  983

Query  961   VQPSVIRTFSSRGDMRVGTSTAGSGMTFSPSQNGTSLD  998
             VQPSVIRTFSSRGDM +GT++AGS MTFSPSQNGTSLD
Sbjct  984   VQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

26) i14_3351 in NC_017652


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1278 bits (4847),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 867/999 (87%), Positives = 945/999 (95%), Gaps = 1/999 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PCETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTAN  120
             + ETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTI  180
             G Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G A+GT+IN+ G Q+I
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAI  202

Query  181   KHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYA  240
             K G++AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YA
Sbjct  203   KSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYA  262

Query  241   GGDQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKGKLQV  300
             GGDQTVHG+A +T L+GG QYVHNGGTA+ T++N DGWQ++K+GG A++TT+NQKG+LQV
Sbjct  263   GGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQV  322

Query  301   NAGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVVAGKADNVVLENGGRLDVLSGHTA  360
             +AGG A++VT + GGALVTSTAATVTG NRLGAFSVV GKADNVVLENGGRLDVL+GHTA
Sbjct  323   DAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  382

Query  361   TNTRVDDGGTLDIRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  420
             TNTRVDDGGTLD+RNGG+ATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML
Sbjct  383   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  442

Query  421   EKGSSFTLNAGDTATDTTVNgglftarggtlagtttlnngatltlsgKTVNNDTLTIREG  480
             EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGA LTLSGKTVNNDTLTIREG
Sbjct  443   EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG  502

Query  481   DALLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  540
             DALLQGG+LTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA
Sbjct  503   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  562

Query  541   LKLTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVPT  600
             LKLTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP+
Sbjct  563   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  622

Query  601   TLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGK  660
             TL+VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGK
Sbjct  623   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGK  682

Query  661   GIQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSENAYRAEVPLYASML  720
             GIQVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSENAYRAEVPLYASML
Sbjct  683   GIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  742

Query  721   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIVRGATPESSGSYGFVR  780
             TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGI RGATPESSGSYGFVR
Sbjct  743   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  802

Query  781   LEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSG  840
             LEGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SG
Sbjct  803   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  862

Query  841   LWADIVAQGTRHSMKASSDNNDFRARGRGWQGSLETGLPFSITDNLMLEPQLQYTWQGLS  900
             LWADIVAQGTRHSMKASSDNNDFRARG+GW GSLETGLPFSITDNLMLEPQLQYTWQGLS
Sbjct  863   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  922

Query  901   LDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNW  960
             LDDG+DNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH+V ELPVNW
Sbjct  923   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNW  982

Query  961   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLD  999
             WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  983   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

27) i02_3351 in NC_017651


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1278 bits (4847),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 867/999 (87%), Positives = 945/999 (95%), Gaps = 1/999 (0%)

Query  1     MLMKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVH  60
              LMKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV+
Sbjct  24    KLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQ  83

Query  61    PCETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTAN  120
             + ETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ 
Sbjct  84    AGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGG  143

Query  121   GRQIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTI  180
             G Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G A+GT+IN+ G Q+I
Sbjct  144   GLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAI  202

Query  181   KHGGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYA  240
             K G++AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YA
Sbjct  203   KSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYA  262

Query  241   GGDQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKGKLQV  300
             GGDQTVHG+A +T L+GG QYVHNGGTA+ T++N DGWQ++K+GG A++TT+NQKG+LQV
Sbjct  263   GGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQV  322

Query  301   NAGGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVVAGKADNVVLENGGRLDVLSGHTA  360
             +AGG A++VT + GGALVTSTAATVTG NRLGAFSVV GKADNVVLENGGRLDVL+GHTA
Sbjct  323   DAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTA  382

Query  361   TNTRVDDGGTLDIRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  420
             TNTRVDDGGTLD+RNGG+ATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML
Sbjct  383   TNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALML  442

Query  421   EKGSSFTLNAGDTATDTTVNgglftarggtlagtttlnngatltlsgKTVNNDTLTIREG  480
             EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGA LTLSGKTVNNDTLTIREG
Sbjct  443   EKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREG  502

Query  481   DALLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  540
             DALLQGG+LTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA
Sbjct  503   DALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  562

Query  541   LKLTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVPT  600
             LKLTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP+
Sbjct  563   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  622

Query  601   TLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGK  660
             TL+VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGK
Sbjct  623   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGK  682

Query  661   GIQVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSENAYRAEVPLYASML  720
             GIQVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSENAYRAEVPLYASML
Sbjct  683   GIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  742

Query  721   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIVRGATPESSGSYGFVR  780
             TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGI RGATPESSGSYGFVR
Sbjct  743   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  802

Query  781   LEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSG  840
             LEGDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SG
Sbjct  803   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  862

Query  841   LWADIVAQGTRHSMKASSDNNDFRARGRGWQGSLETGLPFSITDNLMLEPQLQYTWQGLS  900
             LWADIVAQGTRHSMKASSDNNDFRARG+GW GSLETGLPFSITDNLMLEPQLQYTWQGLS
Sbjct  863   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  922

Query  901   LDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNW  960
             LDDG+DNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH+V ELPVNW
Sbjct  923   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNW  982

Query  961   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLD  999
             WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  983   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

28) ECABU_c33230 in NC_017631


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1276 bits (4841),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 866/997 (87%), Positives = 944/997 (95%), Gaps = 1/997 (0%)

Query  1     MKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPC  60
             MKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++ 
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    ETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGR  120
             ETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ G 
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121   QIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTIKH  180
             Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G A+GT+IN+ G Q+IK 
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAIKS  204

Query  181   GGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGG  240
             G++AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YAGG
Sbjct  205   GAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGG  264

Query  241   DQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKGKLQVNA  300
             DQTVHG+A +T L+GG QYVHNGGTA+ T++N DGWQ++K+GG A++TT+NQKG+LQV+A
Sbjct  265   DQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDA  324

Query  301   GGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVVAGKADNVVLENGGRLDVLSGHTATN  360
             GG A++VT + GGALVTSTAATVTG NRLGAFSVV GKADNVVLENGGRLDVL+GHTATN
Sbjct  325   GGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATN  384

Query  361   TRVDDGGTLDIRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEK  420
             TRVDDGGTLD+RNGG+ATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEK
Sbjct  385   TRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEK  444

Query  421   GSSFTLNAGDTATDTTVNgglftarggtlagtttlnngatltlsgKTVNNDTLTIREGDA  480
             GSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGA LTLSGKTVNNDTLTIREGDA
Sbjct  445   GSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDA  504

Query  481   LLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALK  540
             LLQGG+LTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALK
Sbjct  505   LLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALK  564

Query  541   LTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVPTTL  600
             LTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP+TL
Sbjct  565   LTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATL  624

Query  601   QVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGKGI  660
             +VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGKGI
Sbjct  625   KVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGI  684

Query  661   QVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSENAYRAEVPLYASMLTQ  720
             QVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSENAYRAEVPLYASMLTQ
Sbjct  685   QVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQ  744

Query  721   AMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIVRGATPESSGSYGFVRLE  780
             AMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGI RGATPESSGSYGFVRLE
Sbjct  745   AMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLE  804

Query  781   GDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLW  840
             GDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLW
Sbjct  805   GDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLW  864

Query  841   ADIVAQGTRHSMKASSDNNDFRARGRGWQGSLETGLPFSITDNLMLEPQLQYTWQGLSLD  900
             ADIVAQGTRHSMKASSDNNDFRARG+GW GSLETGLPFSITDNLMLEPQLQYTWQGLSLD
Sbjct  865   ADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLD  924

Query  901   DGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNWWV  960
             DG+DNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH+V ELPVNWWV
Sbjct  925   DGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWV  984

Query  961   QPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLD  997
             QPSVIRTFSSRGDMSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  985   QPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021

29) ECNA114_4551 in NC_017644


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score = 1044 bits (3958),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 731/863 (85%), Positives = 807/863 (94%), Gaps = 1/863 (0%)

Query  1    MKRHLNTCYRLVWNHITGAFVVASELARARGKRGGvavalslaavtslpvlaaDIVVHPC  60
            MKRHLNT YRLVWNHITG++VVASELAR+RGKR+GVAVALSLAAVTS+P LAAD VV++ 
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNGGTLVNHDNQFVSGTADGVTVSTGLELGPDSDENTGGQWIKAGGTGRNTTVTANGR  120
            ETVN+GTL NHDNQ+V GTA+G+T+STGLE GPD++ NTGGQWI+ GGT+ NTTVT+ G 
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QIVQAGGTASDTVIRDGGGQSLNGLAVNTTLDNRGEQWVHGGGKAAGTIINQDGYQTIKH  180
            Q V++GG+ SDTVI  GGGQSL+G AVNTTL+  GEQWVH +G A+GT+IN+ G Q+IK 
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAIKS  204

Query  181  GGLATGTIVNTGAEGGPESENVSSGQMVGGTAESTTINKNGRQVIWSSGMARDTLIYAGG  240
            G++AT+T+VNTGAEGGP++EN  +GQ V G A  TTINKNGRQ++ + G A  T++YAGG
Sbjct  205  GAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGG  264

Query  241  DQTVHGEAHNTRLEGGNQYVHNGGTATETLINRDGWQVIKEGGTAAHTTINQKGKLQVNA  300
            DQTVHG+A +T L+GG QYVHNGGTA+ T++N DGWQ++K+GG A++TT+NQKG+LQV+A
Sbjct  265  DQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDA  324

Query  301  GGKASDVTQNTGGALVTSTAATVTGTNRLGAFSVVAGKADNVVLENGGRLDVLSGHTATN  360
            GG A++VT + GGALVTSTAATVTG NRLGAFSVV GKADNVVLENGGRLDVL+GHTATN
Sbjct  325  GGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATN  384

Query  361  TRVDDGGTLDIRNGGAATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEK  420
            TRVDDGGTLD+RNGG+ATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEK
Sbjct  385  TRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEK  444

Query  421  GSSFTLNAGDTATDTTVNgglftarggtlagtttlnngatltlsgKTVNNDTLTIREGDA  480
            GSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGA LTLSGKTVNNDTLTIREGDA
Sbjct  445  GSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDA  504

Query  481  LLQGGALTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALK  540
            LLQGG+LTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALK
Sbjct  505  LLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALK  564

Query  541  LTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTSARTGKFVPTTL  600
            LTGSTVLNGAIDPTNVTL+SGATWNIPDNATVQSVVDDLSHAGQIHFTS+RTGKFVP+TL
Sbjct  565  LTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATL  624

Query  601  QVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGKGI  660
            +VKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNS++G+ATTGKGI
Sbjct  625  KVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGI  684

Query  661  QVVEAINGATTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSENAYRAEVPLYTSMLTQ  720
            QVVEAINGATTEEGAFVQGN LQAGAFNY+LNRDSDESWYLRSENAYRAEVPLY+SMLTQ
Sbjct  685  QVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQ  744

Query  721  AMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLE  780
            AMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLE
Sbjct  745  AMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLE  804

Query  781  GDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLW  840
            GDLLRTEVAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLW
Sbjct  805  GDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLW  864

Query  841  ADIVAQGTRHSSVDVKDDDGSRA  863
            ADIVAQGTRHS     D+++ RA
Sbjct  865  ADIVAQGTRHSMKASSDNNDFRA  887

30) Dd586_2894 in NC_013592


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  858 bits (3250),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 595/1038 (58%), Positives = 819/1038 (79%), Gaps = 23/1038 (2%)

Query  1     MFFLPRSSVSYRSAPHLQAQAFFYLKLNKVTPVKRNLNTSYRLVWNDVLGAFVVVSELAT  60
             M+F    +  Y   PHL   AF++  L K   +KR+LNTSYRLVWN++ G++VV SELA 
Sbjct  1     MLF---CTCRY---PHLWVPAFLF-TLCKEKLMKRHLNTSYRLVWNHITGTLVVASELAR  53

Query  61    ARGKRSSTVLAIAVAGLMSTAALAAGNTTVPAGQTVDGAVISNHDTQQVWGSATGTVVNT  120
             +RGKR++  +A+++A++ S +ALAA +T V AG+TV+++ ++NHD Q V G+A G  ++T
Sbjct  54    SRGKRAGVAVALSLAAVTSVPALAA-DTVVQAGETVNDGTLTNHDNQIVFGTANGMTIST  112

Query  121   GQEYGDNDDANTGGQFVQSGGVADNTTVNRNGLQAVLSGGSATRTTINAGGGQSVHGQAT  180
             G EYG +++ANTGGQ +Q+GG A+NTTV   GLQ V +GGS + T I+AGGGQS++GQA 
Sbjct  113   GLEYGPDNEANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAV  172

Query  181   DSVLNGGEQWVQSGGSTTGTVISAGGYQLVKNGAQASGTVVNTGAEGGPDAENSD-GMFV  239
             ++ LNGGEQWV+ +G +TGTVI+  G Q +K+GA A++TVVNTGAEGGPDAEN+D G  V
Sbjct  173   NTTLNGGEQWVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTV  232

Query  240   SGIATDTLIHAGGRQIVAAGGSSTGTTIQAGGDQSVHGQAQSTTLDGGNQYVHAGALATG  299
              G A  T I+  GRQIVAA G++  T + AGGDQ+VHG+A  TTL+GG QYVH G+ A+G
Sbjct  233   YGDAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASG  292

Query  300   TTVNAGGWQVVQQSGTADATTVNRDGKLSVSAGGTASNVTLNAGGALVTSTAATVSGINS  359
             T VN++GWQ+V+++G A+ TTVN+ G+L V AGGTA+NVTL+ GGALVTSTAATV+GIN 
Sbjct  293   TVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINR  352

Query  360   LGGFNVDAATASATNVLLENGGRLDVLSGGSADTTTVSNggvlavatggvaQHIVMNEGG  419
             LG+F+V    + A NV+LENGGRLDVL+G +A  T V +GG L V  GG A  + M +GG
Sbjct  353   LGAFSV--VEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGG  410

Query  420   VLIADSGSTVSGTNTAG-TFGIDAATGRASNLHLGNGSMFSVRANGVADNTTVSSGGTLN  478
             VL+ADSG++VSGT + G +F+I++  G+A  L L +GS F++ A + A +TTV++G  L 
Sbjct  411   VLLADSGAAVSGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTVNGG--LF  466

Query  479   VSQGGMLSGTTTLTDSA--TLSGNAISNDRVQVTTATGTVALIsgslggsgqllkdgggT  536
              ++GG L+GTTTL ++A  TLSG++++ND + +    G   L +GSL G+G + K G+GT
Sbjct  467   TARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIRE--GDALLQGGSLTGNGSVEKSGSGT  524

Query  537   LTVSNGTLTQSAVNLNQGSLILDNAQVSTDIIAQsgtsltltgstVMSGAIDPTDVTLDS  596
             LTVSN TLTQ AVNLN+G+L L+++ V+TD+IAQ GT+L LTGSTV++GAIDPT+VTL S
Sbjct  525   LTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLAS  584

Query  597   GASWNIDRHASVASVLDTLTNAGAISFSAPQ-GNFVPATLTVKNLTGRGGSISMFIRLDD  655
             GA+WNI  +A+V SV+D L++AG I F++ + G+FVPATL VKNL G+ G+IS+ +R D 
Sbjct  585   GATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDM  644

Query  656   PTFPTDRLAIDGGQATGKTWLNFTSIGNSGLGLATTGNGIKVVDAVNGATTTGDAFALGH  715
             +   +DRL IDGG+ATGKT LN+ + GNS+ G+ATTG+GI+VV+A+NGATT  +AF  G+
Sbjct  645   AQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGN  704

Query  716   KLQAGAYNYTLNHGTTDENWYLSSEAVYRSEVALYASLYAQSMDYDRALAGTYSQRSTAQ  775
             KLQAGA+NY+LN+++ DE+WYL SE  YR+EV+LYAS+ +Q+MDYDR LAG+ S+++  +
Sbjct  705   KLQAGAFNYSLNRDS-DESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVN  763

Query  776   -EARGMWGRVQGGHTGHGDRSGIAQGATPESSGSYGFVQLGGDLVNAQTGPVSLTAGIYG  834
              E  +++  +QGGH GH++ +GIA+GATPESSGSYGFV+L GDL+ ++ + +S+TAG+YG
Sbjct  764   GENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYG  823

Query  835   AAGESRSDVKNDDRSAAGTARDTVYSLGGYLTAVHQPSGLWADVVAQGSRHSLKAQSDNN  894
             AAG+S  DVK+DD S AGT RD   SLGGYL  +H++SGLWAD+VAQG+RHS+KA SDNN
Sbjct  824   AAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNN  883

Query  895   NFDTHGQGWLGSLETGLPLSVSQGLVLEPQLQYVWQGLSLNNGHDDGGYVDFGHGSAQHV  954
             +F ++G GWLGSLETGLP+S+++ L+LEPQLQY WQGLSL++G D++GYV FGHGSAQHV
Sbjct  884   DFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHV  943

Query  955   RAGLRFGNQSEMTFGQGSSTLPGHERSMKHSISELPVSWWVRPSVVRTFSSQGDLNMGTA  1014
             RAG+R+G++++MTFG+G+S+      S KHS+ ELPV+WWV+PSV+RTFSS+GD++MGTA
Sbjct  944   RAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTA  1003

Query  1015  TPGSNVTFSPSQDGTSAE  1032
             ++GSN+TFSPSQ+GTS +
Sbjct  1004  AAGSNMTFSPSQNGTSLD  1021

31) P12B_c3169 in NC_017663


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  666 bits (2516),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 499/964 (52%), Positives = 716/964 (75%), Gaps = 40/964 (4%)

Query  165   VHSGGITSGTIINKDGAQLVKAGAQATGSVVNTGAQGGPDAE-NNDGQWV--AGTATDTT  221
             V++G   ++  + +++ Q+V + A+  G  ++TG + GPD E N +GQW+  +GTA +TT
Sbjct  82    VQAGETVNDGTLTNHDNQIVFGTAN--GMTISTGLEYGPDNEANTGGQWIQNGGTANNTT  139

Query  222   INNDGRQIIAAGGLATSTVIKADGDQSVHGSAINTLLEGGFQYVHEGASAEGTVISQNGW  281
             +  +G Q + +GG  + TVI A+G+QS++G A+NT L+GG Q VHE++ A GTVI+++GW
Sbjct  140   VTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGW  199

Query  282   QVVKNGATATDTTILNGTGTEvangnsassqsvqaggsaLNTTIGDD-----SPSGELLT  336
             Q +K+GA ATDT +   TG+E + +   +  +    G A+ TTI  +     ++ G   T
Sbjct  200   QAIKSGAVATDTVV--NTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANT  257

Query  337   DLSY----QMVDGGRAENTTINNGGVQSVFAGGTAIGSVVNRGGRLEVSIWQDEPVAGKT  392
              + Y    Q V+G +A +TT+N GG Q V  GGTA G+VVN +G      WQ   +  + 
Sbjct  258   TVVYAGGDQTVHG-HALDTTLN-GGYQYVHNGGTASGTVVNSDG------WQ---IVKNG  306

Query  393   AVAGSANNVTVEADGILSVDAGTSATDVVIKQGGALWATTDSTVTGTNSLGDF-FIDGTT  451
             +VAG   N TV+  G L VDAG +AT+V +KQGGAL ++T +TVTG N LG F  ++G +
Sbjct  307   GVAG---NTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKA  363

Query  452   HIATNVLLENGGRLDVLGNGIADTTTVNQGSILAVATGGKAQNIVMHDGGVLIADTGATV  511
             +   NV+LENGGRLDVL    A  T V++G+ L V  GG A  + M +GGVL+AD+GA+V
Sbjct  364   D---NVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  512   SGTNTTG-AFGIDGATGKASNLRLDNGSQFTVLGNGSADNTTVGAGSTLNVAQggtltgt  570
             SGT + G AF+I+G  G+A  L L++GS FT+ + ++A +TTV +G     +   + T T
Sbjct  421   SGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAGTTT  478

Query  571   ttfgdgASLTGSATNSGQLHFSNGNAAI-SGSVSGDGQLLKEGNGTLTVSNGTLSQSQVT  629
                G   +L+G + N++ L + +G+A + +GS++G+G + K G+GTLTVSN TL+Q  V 
Sbjct  479   LNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVN  538

Query  630   LNQGTLALNNAIINSDIIAQSGTQVRLTGNSVMNGAIDPTDVTLDSAASWNIQRGAAVKS  689
             LN+GTL+LN++ + +D+IAQ GT ++LTG++V+NGAIDPT+VTL S+A+WNI   A+V+S
Sbjct  539   LNEGTLTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQS  598

Query  690   VLDNLDNAGTISFTPATGSQFVPETLTVTNLTGRNGTINMSIRLDDPAFPTDMLVIDGGQ  749
             V+D+L +AG I FT++  ++FVP TL V NL G+NGTI++ +R D +   +D LVIDGG+
Sbjct  599   VVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGR  658

Query  750   ATGKTWLNFthtgdaglglattgNGIKVVDAINGATTEAGAFALGRKLQAGAYNYTLSHG  809
             ATGKT LN+ ++G+++ G+ATTG+GI+VV+AINGATTE GAF  G KLQAGA+NY+L+++
Sbjct  659   ATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRD  718

Query  810   SADENWYLTSEAGYRAEVALYASLFAQSMDYDRALAGTYSQRSSAV-NDQGIWGRIQGGH  868
             S DE+WYL SE +YRAEV+LYAS+++Q+MDYDR LAG+ S++++   ++++++  IQGGH
Sbjct  719   S-DESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGH  777

Query  869   TGRDGNGGIAQGDTPESSGSYGFMQLGGDLFKHDtgtlslttglygAVGQSSVDVKNDDR  928
              G+D NGGIA+G TPESSGSYGF++L GDL++ + + +S+T+G+YGA G+SSVDVK+DD 
Sbjct  778   LGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDG  837

Query  929   SAAGSVRDTVYSIGGYLTAVHDASGLWADIVAQGSRHSLKANSSDNRFDTDGTGWLASVE  988
             S AG+VRD   S+GGYL  +H+ASGLWADIVAQG+RHS+KA+S +N F + G GWL+S+E
Sbjct  838   SRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLE  897

Query  989   TGLPFNISQGLVLEPQLQYIWQGLSLDDGHDNGGYVNFGDGSAQHVRAGIRFGSSSEMDF  1048
             TGLPF+I++ L+LEPQLQY WQGLSLDDG DN+GYV+FG+GSAQHVRAG+R+GS ++M F
Sbjct  898   TGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTF  957

Query  1049  GQGTSAVTGFADSMKRSASELPVNWWVRPSVIRTFSSDGDMSMGTATAGSNVSFTPSQKG  1108
             G+GTS+   + +S K+S  ELPVNWWV+PSVIRTFSS GDMSMGTA+AGSN++F+PSQ+G
Sbjct  958   GEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNG  1017

Query  1109  TSLD  1112
             TSLD
Sbjct  1018  TSLD  1021


 Score =  264 bits (986),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 225/545 (42%), Positives = 373/545 (69%), Gaps = 33/545 (6%)

Query  1    MMKRNLNTSYRLVWNEVLGAFVVVSELAKAKGKRSTavlalavaglvaspaalaDDAPGN  60
            +MKR+LNTSYRLVWN++ G++VV SELA+++GKR+   +AL++A++ + PA  AD     
Sbjct  25   LMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTV---  81

Query  61   TRTVAAGEVVNGAVIGNHDSQIVFGKTNNTVINTGLEFGADNDDNSGGQWVQTGGVANQT  120
               V AGE VN++ + NHD+QIVFG +N   I+TGLE+G+DN+ N+GGQW+Q GG AN+T
Sbjct  82   ---VQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNT  138

Query  121  TINNSGLQGVLAGGSATDTTVNSGGGQSVHGQASDTTLDGGTQWVHSGGITSGTIINKDG  180
            T+  +GLQ V +GGS +DT +++GGGQS++GQA +TTL+GG QWVH +GI++GT+IN  G
Sbjct  139  TVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKG  198

Query  181  AQLVKAGAQATGSVVNTGAQGGPDAENND-GQWVAGTATDTTINNDGRQIIAAGGLATST  239
             Q +K+GA AT++VVNTGA+GGPDAEN D GQ V G A  TTIN++GRQI+AA G A +T
Sbjct  199  WQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTT  258

Query  240  VIKADGDQSVHGSAINTLLEGGFQYVHEGASAEGTVISQNGWQVVKNGATATDTTILNGT  299
            V+ A+GDQ+VHG A++T L+GG+QYVH+G++A GTV++ +GWQ+VKNG+ A +TT+ N  
Sbjct  259  VVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTV-NQK  317

Query  300  GTEvangnsassqsvqaggsaLNTTIGDDSPSGELLTDLSYQMVDGGRAENTTINNGGVQ  359
            G    ++ +++++     G+AL T+ +    + + L   ++ +V+ G+A+N  ++NGG  
Sbjct  318  GRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLG--AFSVVE-GKADNVVLENGGRL  374

Query  360  SVFAGGTAIGSVVNRGGRLEVSIWQDEPVAGKTAVAGSANNVTVEADGILSVDAGTSATD  419
             V++G TA  + V+ GG L+V              +G+A  V++  +G+L  D+G++ ++
Sbjct  375  DVLTGHTATNTRVDDGGTLDVRN------------GGTATTVSMGNGGVLLADSGAAVSG  422

Query  420  VVIKQGGALWATTDSTVTGTNSL--GDFFIDGTTHIATNVLLENGGRLDVLGNGIADTTT  477
                +G A+  + ++  +++  L  G  F   + + AT+  + NGG +   G  +A+TTT
Sbjct  423  -TRSDGKAF--SIGGGQADALMLEKGSSFTLNAGDTATDTTV-NGGLFTARGGTLAGTTT  478

Query  478  VNQGSILAVA-TGGKAQNIVMHDGGVLIADTGATVSGT---NTTGAFGIDGATGKASNLR  533
            +N+G+IL+++    + + + +++G+ L+ + + T +G+   + +G++ +  +T     + 
Sbjct  479  LNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQKAVN  538

Query  534  LDNGS  538
            L++G+
Sbjct  539  LNEGT  543

32) flu1 in NC_010498


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  663 bits (2505),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 475/819 (58%), Positives = 601/819 (74%), Gaps = 52/819 (6%)

Query  108   GTASNTTISSGGLQFVGAGGKATDTIINEGGGQSLKGLALNTTLNGGEQWMHEGAIATGT  167
             G A  TTI+  G Q+V+A G A  T++  GG+Q++ G AL+TTLNGG Q +H+G+ A+GT
Sbjct  234   GDAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGT  293

Query  168   VINDKGWQVVKPGAVATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVTVE  227
             V+N  GWQ+VK G+VA +T                            T+N++GR  V   
Sbjct  294   VVNSDGWQIVKNGGVAGNT----------------------------TVNQKGRLQVDAG  325

Query  228   GTANTTVVYAGGDQTVHGHALDTTLNGGNQYVHNGGTTSDTVVNSDGWQIIKEGGLADFT  287
             GTA    +  GG       A  T +N    +    G + + V++++G+  +  G  A  T
Sbjct  326   GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  288   TVNQKGKLQVNAGGTATNVTLKQGGALVTSTAATVTGSNRLGN-FAVENGKADGVVLESG  346
              V++ G L+V  GGTAT V++ +GG L++ ++A+V+G+   G+ F++  G+AD+++LE G
Sbjct  386   RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKG  445

Query  347   GRLDVLEGHSAQKTRVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK---  403
             + + +  G++A  T V++G  L  + GG  +G T  + GA+++ SG TV+    + +   
Sbjct  446   SSFTLNAGDTATDTTVNGG--LFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGD  503

Query  404   --FSIDGISGQASGLLLENGGSFTVNAGGQAGNTTVGHRGTLTLAAG----GSLSGR-TQ  456
               +  ++++G++S +    +G++TV+    + ++   + GTLTL  +    + ++ R T 
Sbjct  504   ALLQGGSLTGNGS-VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDSTVTTDVIAQRGTA  562

Query  457   LSKGASMVLNGDVVSTGDIVNAGEIR-FDNQTTQDAVLSRAVAKGDAPVTFHK-------  508
             L   +S VLNG + +T   + +G  + + +++T ++V+      G+   T  +       
Sbjct  563   LKLTGSTVLNGAIDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPA  622

Query  509   -LTTSNLTGQGGTINMRVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQ  566
              L   NL GQ GTI++RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+
Sbjct  623   TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGK  682

Query  567   GIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASML  626
             GI+VV+A NGATTEEGAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASML
Sbjct  683   GIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASML  742

Query  627   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  686
             TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR
Sbjct  743   TQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVR  802

Query  687   LESDLLRTEVAGMSVTAGVYSAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSG  746
             LE+DLLRTEVAGMSVTAGVY+AAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SG
Sbjct  803   LEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASG  862

Query  747   LWADIMAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  806
             LWADI+AQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS
Sbjct  863   LWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLS  922

Query  807   LDDGQDNAGYVKFGHGSAQHMRAGFRLGSHNDMSFGEGTSSRDTLRDSAKHRVRELPVNW  866
             LDDG+DNAGYVKFGHGSAQH+RAGFRLGSHNDM+FGEGTSSRDTLR+SAKH VRELPVNW
Sbjct  923   LDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNW  982

Query  867   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  905
             WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD
Sbjct  983   WVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  507 bits (1914),  Expect = 8e-145, Method: Compositional matrix adjust.
 Identities = 367/476 (78%), Positives = 426/476 (90%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtpvpalaadtvvEAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVT+VPALAADTVV+AG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNGGTLTNHDNQIVFGTTNGMTISTGLEYGTDNEANTGGQWVQDGGTASNTTISSGGL  120
            ETVN+GTLTNHDNQIVFGT+NGMTISTGLEYG DNEANTGGQW+Q+GGTA+NTT+++GGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QFVGAGGKATDTIINEGGGQSLKGLALNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
            Q V +GG  +DT+I+ GGGQSL+G A+NTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AVATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVTVEGTANTTVVYAGGD  240
            AVATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTINKNGRQIV+ EGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGNQYVHNGGTTSDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGG QYVHNGGT+S+TVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVTGSNRLGNFAVENGKADGVVLESGGRLDVLEGHSAQKT  360
            GTATNVTLKQGGALVTSTAATVTG NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  RVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
            RVDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

33) flu2 in NC_009801


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 486/855 (57%), Positives = 616/855 (73%), Gaps = 66/855 (7%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQFVRGNAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALV  315
             +  V+  G A   V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVTGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGG  374
             + ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G  L  + GG
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGG--LFTARGG  471

Query  375   KATDVTMTSGGALIADSGATVEGTNASGKFSIDGTSGQASGLLLENG-------GSFTVN  427
               ++ T  + GA+++ SG TV+    + +   +G +   +G L  NG       G++TV+
Sbjct  472   TLAGTTTLNNGAILTLSGKTVNNDTLTIR---EGDALLQGGSLTGNGSVEKSGSGTLTVS  528

Query  428   AGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQT  487
                L+ ++   + GTLTL  + +++      +G+++ L G  V  G I ++ ++ + + +
Sbjct  529   NTTLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLNGAI-DPTNVTLASGA  586

Query  488   T---PDAVLSRAVAKG---DSPVTFH----------KLTTSNLTGQGGTINMRVRLD-GS  530
             T   PD    ++V  +    + + F            L   NL GQ GTI++RVR D + 
Sbjct  587   TWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQ  646

Query  531   NTSDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPL  590
             N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF  +  L
Sbjct  647   NNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKL  706

Query  591   QAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVSGEN  650
             QAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGV+GEN
Sbjct  707   QAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGEN  766

Query  651   NSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAG  710
             NSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+GVYGAAG
Sbjct  767   NSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAG  826

Query  711   HSSVDVKDDDGSRAGTARDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKASSDNNDFR  770
             HSSVDVKDDDGSRAGT RDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKASSDNNDFR
Sbjct  827   HSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFR  886

Query  771   ARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAG  830
             ARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSAQHVRAG
Sbjct  887   ARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAG  946

Query  831   FRLGSHNDMNFGKGTSSRDTLRDSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAG  890
             FRLGSHNDM FG GTSSRDTLR+SAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAG
Sbjct  947   FRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAG  1006

Query  891   SNMTFSPSRNGTSLD  905
             SNMTFSPS+NGTSLD
Sbjct  1007  SNMTFSPSQNGTSLD  1021


 Score =  547 bits (2063),  Expect = 1e-156, Method: Compositional matrix adjust.
 Identities = 394/476 (83%), Positives = 435/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAIALSLAAVTSVPALAADTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVA+ALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNDGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETVNDGTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTLKQGGALVTSTAATVTG NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGTSGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

34) flu in NC_017628


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  648 bits (2450),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 481/853 (57%), Positives = 622/853 (73%), Gaps = 62/853 (7%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATNVTLTQGGALV  315
             +  V+  G A + V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGG  374
             + ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G  L  + GG
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGG--LFTARGG  471

Query  375   KATDVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQASGLLLENGGSFTVNAG  429
               ++ T  + GA+++ SG TV+    + +     +  ++++G++S +    +G++TV+  
Sbjct  472   TLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGS-VEKSGSGTLTVSNT  530

Query  430   GLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQTT-  488
              L+ ++   + GTLTL  + +++      +G+++ L G  V  G I ++ ++ + + +T 
Sbjct  531   TLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLNGAI-DPTNVTLASGATW  588

Query  489   --PDAALSRAVAKG---DSPVTFH----------KLTTSNLTGQGGTINMRVRLD-GSNA  532
               PD A  ++V  +    + + F            L   NL GQ GTI++RVR D + N 
Sbjct  589   NIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNN  648

Query  533   SDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQA  592
             +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF  +  LQA
Sbjct  649   ADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKLQA  708

Query  593   GAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQSGVSGENNS  652
             GAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ+GV+GENNS
Sbjct  709   GAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNS  768

Query  653   VRLSIQGGHLGHDNNGGIARGATPESNGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHS  712
             VRLSIQGGHLGHDNNGGIARGATPES+GSYGFVRLEGDLLRTEVAGMS+T+GVYGAAGHS
Sbjct  769   VRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHS  828

Query  713   SVDVKDDDGSRAGTVRDDAGSLGGYLHLVHTSSGLWADIVAQGTRHSMKASSDNNDFRAR  772
             SVDVKDDDGSRAGTVRDDAGSLGGYL+L+H +SGLWADIVAQGTRHSMKASSDNNDFRAR
Sbjct  829   SVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRAR  888

Query  773   GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFR  832
             GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSAQHVRAGFR
Sbjct  889   GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFR  948

Query  833   LGSHNDMNFGKGTSSRDTLHDSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN  892
             LGSHNDM FG GTSSRDTL++SAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN
Sbjct  949   LGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN  1008

Query  893   MTFSPSRNGTSLD  905
             MTFSPS+NGTSLD
Sbjct  1009  MTFSPSQNGTSLD  1021


 Score =  514 bits (1940),  Expect = 8e-147, Method: Compositional matrix adjust.
 Identities = 393/476 (83%), Positives = 435/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKgagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGK AGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETVN+GTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLTQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTL QGGALVTSTAATVTG NRLG F+V +G+AD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

35) UM146_12220 in NC_017632


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  648 bits (2450),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 481/853 (57%), Positives = 622/853 (73%), Gaps = 62/853 (7%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATNVTLTQGGALV  315
             +  V+  G A + V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGG  374
             + ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G  L  + GG
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGG--LFTARGG  471

Query  375   KATDVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQASGLLLENGGSFTVNAG  429
               ++ T  + GA+++ SG TV+    + +     +  ++++G++S +    +G++TV+  
Sbjct  472   TLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGS-VEKSGSGTLTVSNT  530

Query  430   GLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQTT-  488
              L+ ++   + GTLTL  + +++      +G+++ L G  V  G I ++ ++ + + +T 
Sbjct  531   TLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLNGAI-DPTNVTLASGATW  588

Query  489   --PDAALSRAVAKG---DSPVTFH----------KLTTSNLTGQGGTINMRVRLD-GSNA  532
               PD A  ++V  +    + + F            L   NL GQ GTI++RVR D + N 
Sbjct  589   NIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNN  648

Query  533   SDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQA  592
             +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF  +  LQA
Sbjct  649   ADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKLQA  708

Query  593   GAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQSGVSGENNS  652
             GAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ+GV+GENNS
Sbjct  709   GAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNS  768

Query  653   VRLSIQGGHLGHDNNGGIARGATPESNGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHS  712
             VRLSIQGGHLGHDNNGGIARGATPES+GSYGFVRLEGDLLRTEVAGMS+T+GVYGAAGHS
Sbjct  769   VRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHS  828

Query  713   SVDVKDDDGSRAGTVRDDAGSLGGYLHLVHTSSGLWADIVAQGTRHSMKASSDNNDFRAR  772
             SVDVKDDDGSRAGTVRDDAGSLGGYL+L+H +SGLWADIVAQGTRHSMKASSDNNDFRAR
Sbjct  829   SVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRAR  888

Query  773   GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFR  832
             GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSAQHVRAGFR
Sbjct  889   GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFR  948

Query  833   LGSHNDMNFGKGTSSRDTLHDSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN  892
             LGSHNDM FG GTSSRDTL++SAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN
Sbjct  949   LGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN  1008

Query  893   MTFSPSRNGTSLD  905
             MTFSPS+NGTSLD
Sbjct  1009  MTFSPSQNGTSLD  1021


 Score =  514 bits (1940),  Expect = 8e-147, Method: Compositional matrix adjust.
 Identities = 393/476 (83%), Positives = 435/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKgagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGK AGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETVN+GTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLTQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTL QGGALVTSTAATVTG NRLG F+V +G+AD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

36) UTI89_C1139 in NC_007946


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  648 bits (2450),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 481/853 (57%), Positives = 622/853 (73%), Gaps = 62/853 (7%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATNVTLTQGGALV  315
             +  V+  G A + V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGG  374
             + ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G  L  + GG
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGG--LFTARGG  471

Query  375   KATDVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQASGLLLENGGSFTVNAG  429
               ++ T  + GA+++ SG TV+    + +     +  ++++G++S +    +G++TV+  
Sbjct  472   TLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGS-VEKSGSGTLTVSNT  530

Query  430   GLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQTT-  488
              L+ ++   + GTLTL  + +++      +G+++ L G  V  G I ++ ++ + + +T 
Sbjct  531   TLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLNGAI-DPTNVTLASGATW  588

Query  489   --PDAALSRAVAKG---DSPVTFH----------KLTTSNLTGQGGTINMRVRLD-GSNA  532
               PD A  ++V  +    + + F            L   NL GQ GTI++RVR D + N 
Sbjct  589   NIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNN  648

Query  533   SDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQA  592
             +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF  +  LQA
Sbjct  649   ADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKLQA  708

Query  593   GAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQSGVSGENNS  652
             GAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ+GV+GENNS
Sbjct  709   GAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNS  768

Query  653   VRLSIQGGHLGHDNNGGIARGATPESNGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHS  712
             VRLSIQGGHLGHDNNGGIARGATPES+GSYGFVRLEGDLLRTEVAGMS+T+GVYGAAGHS
Sbjct  769   VRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHS  828

Query  713   SVDVKDDDGSRAGTVRDDAGSLGGYLHLVHTSSGLWADIVAQGTRHSMKASSDNNDFRAR  772
             SVDVKDDDGSRAGTVRDDAGSLGGYL+L+H +SGLWADIVAQGTRHSMKASSDNNDFRAR
Sbjct  829   SVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRAR  888

Query  773   GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFR  832
             GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSAQHVRAGFR
Sbjct  889   GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFR  948

Query  833   LGSHNDMNFGKGTSSRDTLHDSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN  892
             LGSHNDM FG GTSSRDTL++SAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN
Sbjct  949   LGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN  1008

Query  893   MTFSPSRNGTSLD  905
             MTFSPS+NGTSLD
Sbjct  1009  MTFSPSQNGTSLD  1021


 Score =  514 bits (1940),  Expect = 8e-147, Method: Compositional matrix adjust.
 Identities = 393/476 (83%), Positives = 435/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKgagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGK AGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETVN+GTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLTQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTL QGGALVTSTAATVTG NRLG F+V +G+AD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

37) flu in NC_012967


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  647 bits (2446),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 486/848 (58%), Positives = 619/848 (73%), Gaps = 66/848 (7%)

Query  85    ISTGLEYGPDNEANTGGQWVQDGGTASNTTISSGGLQFVGAGGKATDTIINEGGGQSLKG  144
             ++TG E GPD E    GQ     G A  TTI+  G Q+V+A G A  T++  GG+Q++ G
Sbjct  213   VNTGAEGGPDAENGDTGQ--TVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHG  270

Query  145   LALNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPGAVATDTVVNTGAEGGPDVENGDTG  204
              AL+TTLNGG Q +H+G+ A+GTV+N  GWQ+VK G+VA +T                  
Sbjct  271   HALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT------------------  312

Query  205   QFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GGYQYVHNG  262
                       T+N++GR  V A GTA    +  GG       A  T +N  G++  V+  
Sbjct  313   ----------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVE--  360

Query  263   GTASDTVVNSDGWQIIKEGGLANFTTVNQKGKLQVNAGGTATNVTLKQGGVLVTSTAATV  322
             G A + V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GGVL++ ++A+V
Sbjct  361   GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  323   TGSNRLGN-FAVENGKADGVVLESGGRLDVLESHSAQNTLVDDGGTLAVSAGGQATGVTM  381
             +G+   G+ F++  G+AD+++LE G+ + +  +++A +T V++G  L  + GG  +G T 
Sbjct  421   SGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGG--LFTARGGTLAGTTT  478

Query  382   TSGGALIADSGATVEGTNASGK-----FSIDGISGQASGLLLENGGSFTVNVGGQA-SNT  435
              + GA+++ SG TV+    + +     +  ++++G++S   +E++GS T+ V+  + ++ 
Sbjct  479   LNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGS---VEKSGSGTLTVSNTTLTQK  535

Query  436   TVG-HRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQTT----QD  490
             +V  + GTLTL  + +++      +G+++ L G  V  G I ++ ++ + + +T    ++
Sbjct  536   AVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLNGAI-DPTNVTLASGATWNIPDN  593

Query  491   AALSRAVAKSNSPVTFH------------KltttnltgqggtINMRVSLD-GSNASDQLV  537
             A++   V   + +  +H             L   NL GQ GTI++RV  D + N +D+LV
Sbjct  594   ATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLV  653

Query  538   INGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQAGAFNY  597
             I+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF  +  LQAGAFNY
Sbjct  654   IDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKLQAGAFNY  713

Query  598   TLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSI  657
             +LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSI
Sbjct  714   SLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSI  773

Query  658   QGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVK  717
             QGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVK
Sbjct  774   QGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVK  833

Query  718   DDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWL  777
             DDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKASSDNNDFRARGWGWL
Sbjct  834   DDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRARGWGWL  893

Query  778   GSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSTQHVRAGFRLGSHN  837
             GSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGS+QHVRAGFRLGSHN
Sbjct  894   GSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHN  953

Query  838   DMTFGEGTSSRDTLRDSTKHRVSELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSP  897
             DMTFGEGTSSRDTLR+S+KH V ELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSP
Sbjct  954   DMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSP  1013

Query  898   SRNGTSLD  905
             S+NGTSLD
Sbjct  1014  SQNGTSLD  1021


 Score =  514 bits (1939),  Expect = 9e-147, Method: Compositional matrix adjust.
 Identities = 368/476 (78%), Positives = 424/476 (90%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNGGTLTNHDNQIVFGATNGMTISTGLEYGPDNEANTGGQWVQDGGTASNTTISSGGL  120
            ETVN+GTLTNHDNQIVFG++NGMTISTGLEYGPDNEANTGGQW+Q+GGTA+NTT+++GGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QFVGAGGKATDTIINEGGGQSLKGLALNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPG  180
            Q V +GG  +DT+I+ GGGQSL+G A+NTTLNGGEQW+HE++IATGTVIN+KGWQ +K+G
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AVATDTVVNTGAEGGPDVENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGD  240
            AVATDTVVNTGAEGGPD ENGDTGQ V G+AVRTTIN NGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIIKEGGLANFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQI+K+GG+A  TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGVLVTSTAATVTGSNRLGNFAVENGKADGVVLESGGRLDVLESHSAQNT  360
            GTATNVTLKQGG LVTSTAATVTG NRLG F+V +GKAD VVLE+GGRLDVL +H+A NT
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGQATGVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNVGGQASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+N G+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

38) flu1 in NC_009801


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  647 bits (2444),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/855 (58%), Positives = 616/855 (73%), Gaps = 66/855 (7%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALV  315
             +  V+  G A + V++++G+  V  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGG  374
             + ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V+ GG ++  +G 
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVN-GGLFTARGGT  472

Query  375   KATDVTMTSGSALIADSGATVEGTNASGKFSIDGTSGQASGLLLENG-------GSFTVN  427
              A   T+ +G+ L   SG TV+    + +   +G +   +G L  NG       G++TV+
Sbjct  473   LAGTTTLNNGAILTL-SGKTVNNDTLTIR---EGDALLQGGSLTGNGSVEKSGSGTLTVS  528

Query  428   AGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQT  487
                L+ ++   + GTLTL  + +++      +G+++ L G  V  G I ++ ++ + + +
Sbjct  529   NTTLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLNGAI-DPTNVTLASGA  586

Query  488   T---PDAALSRAVAKG---DSPVTFH----------KLTTSNLTGQGGTINMRVRLD-GS  530
             T   PD A  ++V  +    + + F            L   NL GQ GTI++RVR D + 
Sbjct  587   TWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQ  646

Query  531   NTSDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPL  590
             N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF  +  L
Sbjct  647   NNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKL  706

Query  591   QAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQTGVNGEN  650
             QAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQTGVNGEN
Sbjct  707   QAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGEN  766

Query  651   NSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVHGAAG  710
             NSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+GV GAAG
Sbjct  767   NSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAG  826

Query  711   HSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKASSDNNDFR  770
             HSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKASSDNNDFR
Sbjct  827   HSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFR  886

Query  771   ARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAG  830
             ARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSAQHVRAG
Sbjct  887   ARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAG  946

Query  831   FRLGSHNDMSFGEGTSSRDTLRDSAKHRVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAG  890
             FRLGSHNDM+FGEGTSSRDTLR+SAKH VRELPVNWWVQPSVIRTFSSRGDMSMGTAAAG
Sbjct  947   FRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAG  1006

Query  891   SNMTFSPSRNGTSLD  905
             SNMTFSPS+NGTSLD
Sbjct  1007  SNMTFSPSQNGTSLD  1021


 Score =  512 bits (1933),  Expect = 3e-146, Method: Compositional matrix adjust.
 Identities = 389/476 (82%), Positives = 433/476 (91%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGvavalslaavtsvpvlaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKR+GVAVALSLAAVTSVP LAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETV++GTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTIN NGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVK+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTLKQGGALVTSTAATVTG NRLG F+V +G+AD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGSALIADSGATVEGTNASGK-FSIDGTSGQASGLLLE  419
             VDDGGTL V  GG AT V+M +G+ L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

39) flu_1 in NC_022370


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  646 bits (2440),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 480/853 (57%), Positives = 621/853 (73%), Gaps = 62/853 (7%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATNVTLTQGGALV  315
             +  V+  G A + V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGG  374
             + ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G  L  + GG
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGG--LFTARGG  471

Query  375   KATDVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQASGLLLENGGSFTVNAG  429
               ++ T  + GA+++ SG TV+    + +     +  ++++G++S +    +G++TV+  
Sbjct  472   TLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGS-VEKSGSGTLTVSNT  530

Query  430   GLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQTT-  488
              L+ ++   + GTLTL  + +++      +G+++ L G  V  G I ++ ++ + + +T 
Sbjct  531   TLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLNGAI-DPTNVTLASGATW  588

Query  489   --PDAALSRAVAKG---DSPVTFH----------KLTTSNLTGQGGTINMRVRLD-GSNA  532
               PD A  ++V  +    + + F            L   NL GQ GTI++RVR D + N 
Sbjct  589   NIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNN  648

Query  533   SDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQA  592
             +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF  +  LQA
Sbjct  649   ADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKLQA  708

Query  593   GAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQSGVSGENNS  652
             GAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ+GV+GENNS
Sbjct  709   GAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNS  768

Query  653   VRLSIQGGHLGHDNNGGIARGATPESNGSYGFVRLEGDLLRTEVAGMLLTTGVYGAAGHS  712
             VRLSIQGGHLGHDNNGGIARGATPES+GSYGFVRLEGDLLRTEVAGM +T+GVYGAAGHS
Sbjct  769   VRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHS  828

Query  713   SVDVKDDDGSRAGTVRDDAGSLGGYLHLVHTSSGLWADIVAQGTRHSMKASSDNNDFRAR  772
             SVDVKDDDGSRAGTVRDDAGSLGGYL+L+H +SGLWADIVAQGTRHSMKASSDNNDFRAR
Sbjct  829   SVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRAR  888

Query  773   GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFR  832
             GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSAQHVRAGFR
Sbjct  889   GWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFR  948

Query  833   LGSHNDMNFGKGTSSRDTLHDSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN  892
             LGSHNDM FG GTSSRDTL++SAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN
Sbjct  949   LGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSN  1008

Query  893   MTFSPSRNGTSLD  905
             MTFSPS+NGTSLD
Sbjct  1009  MTFSPSQNGTSLD  1021


 Score =  514 bits (1938),  Expect = 9e-147, Method: Compositional matrix adjust.
 Identities = 393/476 (83%), Positives = 435/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKgagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGK AGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETVN+GTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLTQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTL QGGALVTSTAATVTG NRLG F+V +G+AD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

40) ECS88_4891 in NC_011742


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  645 bits (2438),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 492/863 (58%), Positives = 627/863 (73%), Gaps = 82/863 (9%)

Query  103   GTANGMTISSGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  162
             + A +  +++G E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  163   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  222
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  223   AENGDTGQFVRGNAVRTTINKNGRQIVAVEGTANTTVVYAGGDQTVHGHALDTTLN--GG  280
                              T+N++GR  V   GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  281   YQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALV  340
             +  V+  G A + V++++G+  V  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  341   TSTAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAQKTRVDDG------GTL  393
             + ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G      GTL
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTL  473

Query  394   A----------VSAGGKATD---VTMTSGSALIADSGATVEGT---NASGKFSIDGISGQ  437
             A          ++ +GK+ +   +T+  G AL+ +++ T +G+   ++SG +++   +  
Sbjct  474   AGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLT  533

Query  438   ASGLLLENGGSFTVNAGGQASNTTVGHRGT-LMLAAGGSLSGRTQ-----LSKGAS-MVL  490
               ++ L++G ++T+N +  +++  +++RGT L L+++  L+G  +     L+ GA+  + 
Sbjct  534   QKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIP  591

Query  491   NGDVVST--GDIVNAGEIYFDNQTTPDAVLSRAVAKGNAPVTFHKLTTSNLTGQGGTINM  548
             +   V +  +D+ +AG+I F +  T   V          P T   L   NL GQ GTI++
Sbjct  592   DNATVQSVVDDLSHAGQIHFTSTRTGKFV----------PAT---LKVKNLNGQNGTISL  638

Query  549   RVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEG  607
             RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEEG
Sbjct  639   RVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEG  698

Query  608   AFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH  667
             AF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH
Sbjct  699   AFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH  758

Query  668   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVT  727
             QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVT
Sbjct  759   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVT  818

Query  728   AGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKA  787
             AGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKA
Sbjct  819   AGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKA  878

Query  788   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHG  847
             SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHG
Sbjct  879   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHG  938

Query  848   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHRVSELPVNWWVQPSVIRTFSSRGDM  907
             SAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH V ELPVNWWVQPSVIRTFSSRGDM
Sbjct  939   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM  998

Query  908   SMGTAAAGSNMTFSPSRNGTSLD  930
             SMGTAAAGSNMTFSPS+NGTSLD
Sbjct  999   SMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  580 bits (2191),  Expect = 1e-166, Method: Compositional matrix adjust.
 Identities = 414/501 (83%), Positives = 458/501 (92%), Gaps = 5/501 (0%)

Query  1    MLFCTCRYPLLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRag  60
            MLFCTCRYP LWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAG
Sbjct  1    MLFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAG  60

Query  61   vavvlslaavtsvpalaaDTVVQAGETVNGGTLTNHDNQIVLGTANGMTISSGLEYGPDN  120
            VAV LSLAAVTSVPALAADTVVQAGETVN+GTLTNHDNQIV+GTANGMTIS+GLEYGPDN
Sbjct  61   VAVALSLAAVTSVPALAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDN  120

Query  121  EANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGE  180
            EANTGGQWIQNGG ANNTTVTGGGLQRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGE
Sbjct  121  EANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGE  180

Query  181  QWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTT  240
            QWVHE+GIATGTVINEKGWQA+KSGA+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTT
Sbjct  181  QWVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTT  240

Query  241  INKNGRQIVAVEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGW  300
            INKNGRQIVA EGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGW
Sbjct  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGW  300

Query  301  QIVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAATVTGSNRLGNFTVEN  360
            QIVK+GG+A+ TTVNQKG+LQV+AGGTATNVTLKQGGALVTSTAATVTG NRLG F+V +
Sbjct  301  QIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVE  360

Query  361  GNADGVVLESGGRLDVLEGHSAQKTRVDDGGTLAVSAGGKATDVTMTSGSALIADSGATV  420
            G+AD VVLE+GGRLDVL GH+A +TRVDDGGTL V  GG AT V+M +G+ L+ADSGA+V
Sbjct  361  GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  421  EGTNASGK-FSIDGISGQASGLLLENGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGR  479
             GT + GK FSI+G  GQA +L+LE+G+SFT+NAG+ A++TTV   G L  A GG+L+G 
Sbjct  421  SGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGT  476

Query  480  TQLSKGASMVLNGDVVSTGDI  500
            T L++GA + L+G  V+ + +
Sbjct  477  TTLNNGAILTLSGKTVNNDTL  497

41) EC042_4803 in NC_017626


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  644 bits (2435),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 487/852 (58%), Positives = 620/852 (73%), Gaps = 60/852 (7%)

Query  103   GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  162
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  163   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  222
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  223   AENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  280
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  281   YQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALV  340
             +  V+  G A + V++++G+  V  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  341   TSTAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGG  399
             + ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G  L  + GG
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGG--LFTARGG  471

Query  400   KATDVTMTSGSALIADSGATVEGTNAS---GKFSIDGTSGQASGLLLENG-GSFTVNAGG  455
               ++ T  + +A+++ SG TV+    +   G   ++G S  ++G +  +G G++TV+   
Sbjct  472   TLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTT  531

Query  456   LASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQTT--  513
             L+ ++   + GTLTL  + +++      +G+++ L G  V  G I ++ ++ + + +T  
Sbjct  532   LTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLNGAI-DPTNVTLASGATWN  589

Query  514   -PDAALSRAVAKG---DSPVTFH----------KLTTSNLTGQGGTINMRVRLD-GSNTS  558
              PD A  ++V  +    + + F            L   NL GQ GTI++RVR D + N +
Sbjct  590   IPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNA  649

Query  559   DQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAFALSRPLQAG  618
             D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF  +  LQAG
Sbjct  650   DRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKLQAG  709

Query  619   AFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQTGVNGENNSV  678
             AFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQTGVNGENNSV
Sbjct  710   AFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNSV  769

Query  679   RLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVHGAAGHSS  738
             RLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+GV GAAGHSS
Sbjct  770   RLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSS  829

Query  739   VDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKASSDNNDFRARG  798
             VDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKASSDNNDFRARG
Sbjct  830   VDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRARG  889

Query  799   WGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSAQHVRAGFRL  858
             WGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSAQHVRAGFRL
Sbjct  890   WGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRL  949

Query  859   GSHNDMSFGEGTSSRDTLRDSAKHRVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNM  918
             GSHNDM+FGEGTSSRDTLR+SAKH VRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNM
Sbjct  950   GSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNM  1009

Query  919   TFSPSRNGTSLD  930
             TFSPS+NGTSLD
Sbjct  1010  TFSPSQNGTSLD  1021


 Score =  580 bits (2189),  Expect = 1e-166, Method: Compositional matrix adjust.
 Identities = 414/501 (83%), Positives = 458/501 (92%), Gaps = 5/501 (0%)

Query  1    MLFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRTG  60
            MLFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKR+G
Sbjct  1    MLFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAG  60

Query  61   vavalslaavtsvpvlaaDTVVQAGETVSGGTLTNHDNQIVFGTANGMTISTGLEYGPDN  120
            VAVALSLAAVTSVP LAADTVVQAGETV++GTLTNHDNQIVFGTANGMTISTGLEYGPDN
Sbjct  61   VAVALSLAAVTSVPALAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDN  120

Query  121  EANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGE  180
            EANTGGQWIQNGG ANNTTVTGGGLQRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGE
Sbjct  121  EANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGE  180

Query  181  QWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTT  240
            QWVHE+GIATGTVINEKGWQA+KSGA+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTT
Sbjct  181  QWVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTT  240

Query  241  INENGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGW  300
            IN NGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGW
Sbjct  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGW  300

Query  301  QIVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAATVTGSNRLGNFTVEN  360
            QIVK+GG+A+ TTVNQKG+LQV+AGGTATNVTLKQGGALVTSTAATVTG NRLG F+V +
Sbjct  301  QIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVE  360

Query  361  GNADGVVLESGGRLDVLEGHSAWKTLVDDGGTLAVSAGGKATDVTMTSGSALIADSGATV  420
            G+AD VVLE+GGRLDVL GH+A +T VDDGGTL V  GG AT V+M +G+ L+ADSGA+V
Sbjct  361  GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  421  EGTNASGK-FSIDGTSGQASGLLLENGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGR  479
             GT + GK FSI+G  GQA +L+LE+G+SFT+NAG+ A++TTV   G L  A GG+L+G 
Sbjct  421  SGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGT  476

Query  480  TQLSKGASMVLNGDVVSTGDI  500
            T L++GA + L+G  V+ + +
Sbjct  477  TTLNNGAILTLSGKTVNNDTL  497

42) O3M_00325 in NC_018650


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  642 bits (2425),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/863 (57%), Positives = 626/863 (73%), Gaps = 82/863 (9%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQFVRGNAVRTTINKNGRQIVAVEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V   GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALV  315
             +  V+  G A + V++++G+  V  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSAQKTRVDDG------GTL  368
             + ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G      GTL
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTL  473

Query  369   A----------VSAGGKATD---VTMTSGSALIADSGATVEGT---NASGKFSIDGTSGQ  412
             A          ++ +GK+ +   +T+  G AL+ +++ T +G+   ++SG +++  T+  
Sbjct  474   AGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLT  533

Query  413   ASGLLLENGGSFTVNAGGQASNTTVGHRGT-LMLAAGGSLSGRTQ-----LSKGAS-MVL  465
               ++ L++G ++T+N +  +++  +++RGT L L+++  L+G  +     L+ GA+  + 
Sbjct  534   QKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIP  591

Query  466   NGDVVST--GDIVNAGEIYFDNQTTPDAVLSRAVAKGDSPVTFHKLTTSNLTGQGGTINM  523
             +   V +  +D+ +AG+I F +  T   V          P T   L   NL GQ GTI++
Sbjct  592   DNATVQSVVDDLSHAGQIHFTSTRTGKFV----------PAT---LKVKNLNGQNGTISL  638

Query  524   RVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEG  582
             RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEG
Sbjct  639   RVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEG  698

Query  583   AFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSH  642
             AF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSH
Sbjct  699   AFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH  758

Query  643   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLT  702
             QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T
Sbjct  759   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVT  818

Query  703   TGVHGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKA  762
             +GV GAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKA
Sbjct  819   AGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKA  878

Query  763   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHG  822
             SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHG
Sbjct  879   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHG  938

Query  823   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHRVSELPVNWWVQPSVIRTFSSRGDM  882
             SAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH V ELPVNWWVQPSVIRTFSSRGDM
Sbjct  939   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM  998

Query  883   SMGTAAAGSNMTFSPSRNGTSLD  905
             SMGTAAAGSNMTFSPS+NGTSLD
Sbjct  999   SMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  549 bits (2073),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 389/476 (82%), Positives = 434/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAIALSLAAVTSVPALAADTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKR+GVA+ALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETV++GTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVAVEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTINKNGRQIVA EGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVK+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAQKT  360
            GTATNVTLKQGGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  RVDDGGTLAVSAGGKATDVTMTSGSALIADSGATVEGTNASGK-FSIDGTSGQASGLLLE  419
            RVDDGGTL V  GG AT V+M +G+ L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

43) O3O_25300 in NC_018661


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  642 bits (2425),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/863 (57%), Positives = 626/863 (73%), Gaps = 82/863 (9%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQFVRGNAVRTTINKNGRQIVAVEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V   GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALV  315
             +  V+  G A + V++++G+  V  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSAQKTRVDDG------GTL  368
             + ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G      GTL
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTL  473

Query  369   A----------VSAGGKATD---VTMTSGSALIADSGATVEGT---NASGKFSIDGTSGQ  412
             A          ++ +GK+ +   +T+  G AL+ +++ T +G+   ++SG +++  T+  
Sbjct  474   AGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLT  533

Query  413   ASGLLLENGGSFTVNAGGQASNTTVGHRGT-LMLAAGGSLSGRTQ-----LSKGAS-MVL  465
               ++ L++G ++T+N +  +++  +++RGT L L+++  L+G  +     L+ GA+  + 
Sbjct  534   QKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIP  591

Query  466   NGDVVST--GDIVNAGEIYFDNQTTPDAVLSRAVAKGDSPVTFHKLTTSNLTGQGGTINM  523
             +   V +  +D+ +AG+I F +  T   V          P T   L   NL GQ GTI++
Sbjct  592   DNATVQSVVDDLSHAGQIHFTSTRTGKFV----------PAT---LKVKNLNGQNGTISL  638

Query  524   RVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEG  582
             RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEG
Sbjct  639   RVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEG  698

Query  583   AFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSH  642
             AF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSH
Sbjct  699   AFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH  758

Query  643   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLT  702
             QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T
Sbjct  759   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVT  818

Query  703   TGVHGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKA  762
             +GV GAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKA
Sbjct  819   AGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKA  878

Query  763   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHG  822
             SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHG
Sbjct  879   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHG  938

Query  823   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHRVSELPVNWWVQPSVIRTFSSRGDM  882
             SAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH V ELPVNWWVQPSVIRTFSSRGDM
Sbjct  939   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM  998

Query  883   SMGTAAAGSNMTFSPSRNGTSLD  905
             SMGTAAAGSNMTFSPS+NGTSLD
Sbjct  999   SMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  549 bits (2073),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 389/476 (82%), Positives = 434/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAIALSLAAVTSVPALAADTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKR+GVA+ALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETV++GTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVAVEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTINKNGRQIVA EGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVK+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAQKT  360
            GTATNVTLKQGGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  RVDDGGTLAVSAGGKATDVTMTSGSALIADSGATVEGTNASGK-FSIDGTSGQASGLLLE  419
            RVDDGGTL V  GG AT V+M +G+ L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

44) O3K_00310 in NC_018658


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  642 bits (2425),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 489/863 (57%), Positives = 626/863 (73%), Gaps = 82/863 (9%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQFVRGNAVRTTINKNGRQIVAVEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V   GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALV  315
             +  V+  G A + V++++G+  V  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSAQKTRVDDG------GTL  368
             + ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G      GTL
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTL  473

Query  369   A----------VSAGGKATD---VTMTSGSALIADSGATVEGT---NASGKFSIDGTSGQ  412
             A          ++ +GK+ +   +T+  G AL+ +++ T +G+   ++SG +++  T+  
Sbjct  474   AGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLT  533

Query  413   ASGLLLENGGSFTVNAGGQASNTTVGHRGT-LMLAAGGSLSGRTQ-----LSKGAS-MVL  465
               ++ L++G ++T+N +  +++  +++RGT L L+++  L+G  +     L+ GA+  + 
Sbjct  534   QKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIP  591

Query  466   NGDVVST--GDIVNAGEIYFDNQTTPDAVLSRAVAKGDSPVTFHKLTTSNLTGQGGTINM  523
             +   V +  +D+ +AG+I F +  T   V          P T   L   NL GQ GTI++
Sbjct  592   DNATVQSVVDDLSHAGQIHFTSTRTGKFV----------PAT---LKVKNLNGQNGTISL  638

Query  524   RVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEG  582
             RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEG
Sbjct  639   RVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEG  698

Query  583   AFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSH  642
             AF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSH
Sbjct  699   AFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH  758

Query  643   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLT  702
             QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T
Sbjct  759   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVT  818

Query  703   TGVHGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKA  762
             +GV GAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKA
Sbjct  819   AGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKA  878

Query  763   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHG  822
             SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHG
Sbjct  879   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHG  938

Query  823   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHRVSELPVNWWVQPSVIRTFSSRGDM  882
             SAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH V ELPVNWWVQPSVIRTFSSRGDM
Sbjct  939   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM  998

Query  883   SMGTAAAGSNMTFSPSRNGTSLD  905
             SMGTAAAGSNMTFSPS+NGTSLD
Sbjct  999   SMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  549 bits (2073),  Expect = 2e-157, Method: Compositional matrix adjust.
 Identities = 389/476 (82%), Positives = 434/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAIALSLAAVTSVPALAADTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKR+GVA+ALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETV++GTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVAVEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTINKNGRQIVA EGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASDTVVNSDGWQIVKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTAS+TVVNSDGWQIVK+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAQKT  360
            GTATNVTLKQGGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  RVDDGGTLAVSAGGKATDVTMTSGSALIADSGATVEGTNASGK-FSIDGTSGQASGLLLE  419
            RVDDGGTL V  GG AT V+M +G+ L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

45) ROD_49731 in NC_013716


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  641 bits (2423),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 474/820 (58%), Positives = 606/820 (74%), Gaps = 80/820 (9%)

Query  121   QRVNAGGSVSDTVIsagggqslqgqalNTTLNGGEQWVHEGGIATGTVINEKGWQVVKPG  180
             Q V A G+ + TV+ AGG+Q+++G+AL+TTLNGG Q VH+GG A+GTV+N  GWQ+VK G
Sbjct  247   QIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNG  306

Query  181   AVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINENGRQIVAAEGTANTTVVYAGGD  240
             +VA +T                            T+N++GR  V A GTA    +  GG 
Sbjct  307   GVAGNT----------------------------TVNQKGRLQVDAGGTATNVTLKQGGA  338

Query  241   QTVHGHALDTTLN--GGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVN  298
                   A  T +N  G++  V+  G A   V++++G+  +  G  A  T V++ G L+V 
Sbjct  339   LVTSTAATVTGINRLGAFSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVR  396

Query  299   AGGTATNVTLKQGGALVTSTAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSA  357
              GGTAT V++ +GG L++ ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A
Sbjct  397   NGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTA  456

Query  358   WKTLVDDG------GTLA----------VSAGGKATD---VTMTSGGALIADSGATVEGT  398
               T V++G      GTLA          ++ +GK+ +   +T+  G+AL+ +++ T +G+
Sbjct  457   TDTTVNGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGS  516

Query  399   ---NASGKFSIDGISGQASGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGR  454
                ++SG +++   +    ++ L++G ++T+N +  + +  +++RGT L L+++  L+G 
Sbjct  517   VEKSGSGTLTVSNTTLTQKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGA  574

Query  455   TQ-----LSKGAS-MVLNGDVVST--GDIVNAGEIHFDNQTTPDAALSRAVAKGDSPVTF  506
              +     L+ GA+  + +   V +  +D+ +AG+IHF +  T     ++ V+        
Sbjct  575   IDPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRT-----GKFVPA-------  622

Query  507   HKLTTSNLTGQGGTINMRVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSG  565
               L   NL GQ GTI++RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G
Sbjct  623   -TLKVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTG  681

Query  566   QGIRVVDAQNGATTEEGSFALSRPLQAGAFNYTLNRDRDEDWYLRSENAYRAEVPLYASM  625
             +GI+VV+A NGATTEEG+F  +  LQAGAFNY+LNRD DE WYLRSENAYRAEVPLYASM
Sbjct  682   KGIQVVEAINGATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASM  741

Query  626   LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESNGSYGFV  685
             LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPES+GSYGFV
Sbjct  742   LTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFV  801

Query  686   RLEGDLLRTEVAGMSVTAGVYGVAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSS  745
             RLEGDLLRTEVAGMSVTAGVYG AGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +S
Sbjct  802   RLEGDLLRTEVAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNAS  861

Query  746   GLWTDIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGL  805
             GLW+DIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGL
Sbjct  862   GLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGL  921

Query  806   SLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMNFGKGTSSRDTLRDSAKHSVRELPVN  865
             SLDDG+DNAGYVKFGHGSAQHVRAGFRLGSHNDM FG GTSSRDTLR+SAKHSVRELPVN
Sbjct  922   SLDDGKDNAGYVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVN  981

Query  866   WWVQPSVIRTFSSRGNMSMGTAAAGSNMTFSPSRNGTTLD  905
             WWVQPSVIRTFSSRG+MSMGTAAAGSNMTFSPS+NGT+LD
Sbjct  982   WWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  518 bits (1956),  Expect = 4e-148, Method: Compositional matrix adjust.
 Identities = 387/476 (82%), Positives = 432/476 (91%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGVAVALSFAAVTSVPALAADTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKR+GVAVALS+AAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLANHDNQIVFGTTNEMTISTGLEYGPDNEANTGGQWIQnggtannttvtgggL  120
            ETV++GTL+NHDNQIVFGT+N MTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqalNTTLNGGEQWVHEGGIATGTVINEKGWQVVKPG  180
            QRVN+GGSVSDTVISAGGGQSLQGQA+NTTLNGGEQWVHE+GIATGTVINEKGWQ +K+G
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AVATDTVVNTGAEGGPDAENGDTGQFVRGDAVRTTINENGRQIVAAEGTANTTVVYAGGD  240
            AVATDTVVNTGAEGGPDAENGDTGQ V GDAVRTTIN NGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTLKQGGALVTSTAATVTG NRLG F+V +G+AD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

46) i14_4885a in NC_017652


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  640 bits (2420),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/810 (59%), Positives = 597/810 (74%), Gaps = 60/810 (7%)

Query  146   QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  205
             Q V A G+ + TV+ AGG+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G
Sbjct  247   QIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNG  306

Query  206   ALATDTVVNTGAEGGPDAENGDTGQTVYGDAIRTTINKNGRQIVAAEGTANTTVVYAGGD  265
             ++A +T                            T+N++GR  V A GTA    +  GG 
Sbjct  307   GVAGNT----------------------------TVNQKGRLQVDAGGTATNVTLKQGGA  338

Query  266   QTVHGHALDTTLN--GGYQYVHNGGTATDTVVNSDGWQVVKDGAVAENTTVNQKGKLQVN  323
                   A  T +N  G++  V+  G A + V++++G+  V  G  A NT V++ G L+V 
Sbjct  339   LVTSTAATVTGINRLGAFSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVR  396

Query  324   AGGTATNVTLKQGGALVTSTAATVTGSNRLGN-FAVENGKADGVVLESGGRLDVLESHSA  382
              GGTAT V++ +GG L++ ++A+V+G+   G+ F++  G+AD+++LE G+ + +  +++A
Sbjct  397   NGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTA  456

Query  383   QNILVDDGGTLAVSVGGKATDVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQ  437
              +  V++G  L  + GG  ++ T  + GA+++ SG TV+    + +     +  ++++G+
Sbjct  457   TDTTVNGG--LFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGN  514

Query  438   ASGLLLENGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVST  497
             +S +    +G++TV+   L+ ++   + GTLTL  + +++      +G+++ L G  V  
Sbjct  515   GS-VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLN  572

Query  498   GDIVNAGEIRFDNQTT---PDAALSRAVAKS---NSPVTFH----------KLTTSNLTG  541
             G I ++ ++ + + +T   PD A  ++V       + + F            L   NL G
Sbjct  573   GAI-DPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNG  631

Query  542   QGGTINMRVSLD-GSNDSDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQN  600
             Q GTI++RV  D + N++D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A N
Sbjct  632   QNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAIN  691

Query  601   GATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRI  660
             GATTEEGAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRI
Sbjct  692   GATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRI  751

Query  661   LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE  720
             LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE
Sbjct  752   LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE  811

Query  721   VAGMSLTTGGYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQG  780
             VAGMS+T+G YGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQG
Sbjct  812   VAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQG  871

Query  781   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAG  840
             TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAG
Sbjct  872   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAG  931

Query  841   YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQPSVIRT  900
             YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQPSVIRT
Sbjct  932   YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRT  991

Query  901   FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  930
             FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD
Sbjct  992   FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  567 bits (2140),  Expect = 1e-162, Method: Compositional matrix adjust.
 Identities = 417/501 (84%), Positives = 461/501 (93%), Gaps = 5/501 (0%)

Query  1    MLFCTCRYPLLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGSLVVASELARSRGKRag  60
            MLFCTCRYP LWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITG+LVVASELARSRGKRAG
Sbjct  1    MLFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAG  60

Query  61   vavalslaavtsvpalaaDTVVQAGETVNGGTLTNHDNQIILGTANGMTISTGLEYGPDN  120
            VAVALSLAAVTSVPALAADTVVQAGETVN+GTLTNHDNQI++GTANGMTISTGLEYGPDN
Sbjct  61   VAVALSLAAVTSVPALAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDN  120

Query  121  EANTGGQWIQnggtannttvtgggLQRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGE  180
            EANTGGQWIQNGGTANNTTVTGGGLQRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGE
Sbjct  121  EANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGE  180

Query  181  QWVHEGGIATGTVINEKGWQAVKSGALATDTVVNTGAEGGPDAENGDTGQTVYGDAIRTT  240
            QWVHE+GIATGTVINEKGWQA+KSGA+ATDTVVNTGAEGGPDAENGDTGQTVYGDA+RTT
Sbjct  181  QWVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTT  240

Query  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTATDTVVNSDGW  300
            INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTA++TVVNSDGW
Sbjct  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGW  300

Query  301  QVVKDGAVAENTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAATVTGSNRLGNFAVEN  360
            Q+VK+G+VA NTTVNQKG+LQV+AGGTATNVTLKQGGALVTSTAATVTG NRLG F+V +
Sbjct  301  QIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVE  360

Query  361  GKADGVVLESGGRLDVLESHSAQNILVDDGGTLAVSVGGKATDVTMTSGGALIADSGATV  420
            GKAD VVLE+GGRLDVL +H+A N  VDDGGTL V  GG AT V+M +GG L+ADSGA+V
Sbjct  361  GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  421  EGTNASGK-FSIDGISGQASGLLLENGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGR  479
             GT + GK FSI+G  GQA +L+LE+G+SFT+NAG+ A++TTV   G L  A GG+L+G 
Sbjct  421  SGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGT  476

Query  480  TQLSKGASMVLNGDVVSTGDI  500
            T L++GA + L+G  V+ + +
Sbjct  477  TTLNNGAILTLSGKTVNNDTL  497

47) i02_4885a in NC_017651


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  640 bits (2420),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/810 (59%), Positives = 597/810 (74%), Gaps = 60/810 (7%)

Query  146   QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  205
             Q V A G+ + TV+ AGG+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G
Sbjct  247   QIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNG  306

Query  206   ALATDTVVNTGAEGGPDAENGDTGQTVYGDAIRTTINKNGRQIVAAEGTANTTVVYAGGD  265
             ++A +T                            T+N++GR  V A GTA    +  GG 
Sbjct  307   GVAGNT----------------------------TVNQKGRLQVDAGGTATNVTLKQGGA  338

Query  266   QTVHGHALDTTLN--GGYQYVHNGGTATDTVVNSDGWQVVKDGAVAENTTVNQKGKLQVN  323
                   A  T +N  G++  V+  G A + V++++G+  V  G  A NT V++ G L+V 
Sbjct  339   LVTSTAATVTGINRLGAFSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVR  396

Query  324   AGGTATNVTLKQGGALVTSTAATVTGSNRLGN-FAVENGKADGVVLESGGRLDVLESHSA  382
              GGTAT V++ +GG L++ ++A+V+G+   G+ F++  G+AD+++LE G+ + +  +++A
Sbjct  397   NGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTA  456

Query  383   QNILVDDGGTLAVSVGGKATDVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQ  437
              +  V++G  L  + GG  ++ T  + GA+++ SG TV+    + +     +  ++++G+
Sbjct  457   TDTTVNGG--LFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGN  514

Query  438   ASGLLLENGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVST  497
             +S +    +G++TV+   L+ ++   + GTLTL  + +++      +G+++ L G  V  
Sbjct  515   GS-VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLN  572

Query  498   GDIVNAGEIRFDNQTT---PDAALSRAVAKS---NSPVTFH----------KLTTSNLTG  541
             G I ++ ++ + + +T   PD A  ++V       + + F            L   NL G
Sbjct  573   GAI-DPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNG  631

Query  542   QGGTINMRVSLD-GSNDSDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQN  600
             Q GTI++RV  D + N++D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A N
Sbjct  632   QNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAIN  691

Query  601   GATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRI  660
             GATTEEGAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRI
Sbjct  692   GATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRI  751

Query  661   LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE  720
             LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE
Sbjct  752   LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE  811

Query  721   VAGMSLTTGGYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQG  780
             VAGMS+T+G YGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQG
Sbjct  812   VAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQG  871

Query  781   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAG  840
             TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAG
Sbjct  872   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAG  931

Query  841   YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVSELPVNWWVQPSVIRT  900
             YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHSV ELPVNWWVQPSVIRT
Sbjct  932   YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRT  991

Query  901   FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  930
             FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD
Sbjct  992   FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  567 bits (2140),  Expect = 1e-162, Method: Compositional matrix adjust.
 Identities = 417/501 (84%), Positives = 461/501 (93%), Gaps = 5/501 (0%)

Query  1    MLFCTCRYPLLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGSLVVASELARSRGKRag  60
            MLFCTCRYP LWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITG+LVVASELARSRGKRAG
Sbjct  1    MLFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAG  60

Query  61   vavalslaavtsvpalaaDTVVQAGETVNGGTLTNHDNQIILGTANGMTISTGLEYGPDN  120
            VAVALSLAAVTSVPALAADTVVQAGETVN+GTLTNHDNQI++GTANGMTISTGLEYGPDN
Sbjct  61   VAVALSLAAVTSVPALAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDN  120

Query  121  EANTGGQWIQnggtannttvtgggLQRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGE  180
            EANTGGQWIQNGGTANNTTVTGGGLQRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGE
Sbjct  121  EANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGE  180

Query  181  QWVHEGGIATGTVINEKGWQAVKSGALATDTVVNTGAEGGPDAENGDTGQTVYGDAIRTT  240
            QWVHE+GIATGTVINEKGWQA+KSGA+ATDTVVNTGAEGGPDAENGDTGQTVYGDA+RTT
Sbjct  181  QWVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTT  240

Query  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTATDTVVNSDGW  300
            INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTA++TVVNSDGW
Sbjct  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGW  300

Query  301  QVVKDGAVAENTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAATVTGSNRLGNFAVEN  360
            Q+VK+G+VA NTTVNQKG+LQV+AGGTATNVTLKQGGALVTSTAATVTG NRLG F+V +
Sbjct  301  QIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVE  360

Query  361  GKADGVVLESGGRLDVLESHSAQNILVDDGGTLAVSVGGKATDVTMTSGGALIADSGATV  420
            GKAD VVLE+GGRLDVL +H+A N  VDDGGTL V  GG AT V+M +GG L+ADSGA+V
Sbjct  361  GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  421  EGTNASGK-FSIDGISGQASGLLLENGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGR  479
             GT + GK FSI+G  GQA +L+LE+G+SFT+NAG+ A++TTV   G L  A GG+L+G 
Sbjct  421  SGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGT  476

Query  480  TQLSKGASMVLNGDVVSTGDI  500
            T L++GA + L+G  V+ + +
Sbjct  477  TTLNNGAILTLSGKTVNNDTL  497

48) ECP_3009 in NC_008253


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  640 bits (2417),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 487/861 (57%), Positives = 624/861 (73%), Gaps = 78/861 (9%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGDQTVHGYALDTTLNGGNQ  257
                              T+N++GR  V A GTA    +  GG       A  T +N    
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  258   YVHNGGTASGTVVNSDGWQIVKEGGLADFTIVNQKGKLQVNAGGTATNVTLKQGGALVTS  317
             +    G A   V++++G+  V  G  A  T V++ G L+V  GGTAT V++ +GG L++ 
Sbjct  356   FSVVEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLAD  415

Query  318   TAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDG------GTLA-  369
             ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G      GTLA 
Sbjct  416   SGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAG  475

Query  370   ---------VSAGGKATD---VTMTSGGALIADSGATVEGT---NASGKFSIDGISGQAS  414
                      ++ +GK+ +   +T+  G+AL+ +++ T +G+   ++SG +++   +    
Sbjct  476   TTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQK  535

Query  415   GLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVLNG  467
             ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + + 
Sbjct  536   AVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDN  593

Query  468   DVVST--GDIVNAGEIHFDNQTTPDAALSRAVAKGDSPVTFHKLTTSNLTGQGGTINMRV  525
               V +  +D+ +AG+IHF +  T     ++ V+          L   NL GQ GTI++RV
Sbjct  594   ATVQSVVDDLSHAGQIHFTSTRT-----GKFVPA--------TLKVKNLNGQNGTISLRV  640

Query  526   RLD-GSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEGAF  584
             R D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEEGAF
Sbjct  641   RPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAF  700

Query  585   ALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQT  644
               +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQT
Sbjct  701   VQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQT  760

Query  645   GVNGENNSFRLSIQGGHLGHVNNGGIARGATPESSGSYGLVRLEGDLLRTEVAGMSLTTG  704
             GVNGENNS RLSIQGGHLGH NNGGIARGATPESSGSYG+VRLEGDLLRTEVAGMS+T+G
Sbjct  761   GVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAG  820

Query  705   VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKASS  764
             VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKASS
Sbjct  821   VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASS  880

Query  765   DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSA  824
             DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSA
Sbjct  881   DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSA  940

Query  825   QHVRAGFRLGSHNDMNFGKGTSSRDTLRDSAKHSVRELPVNWWVQPSVIRTFSSRGDMSM  884
             QHVRAGFRLGSHNDM FG GTSSRDTLR+SAKHSVRELPVNWWVQPSVIRTFSSRGDMSM
Sbjct  941   QHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSM  1000

Query  885   GTAAAGSNMTFSPSQNGTTLD  905
             GTAAAGSNMTFSPSQNGT+LD
Sbjct  1001  GTAAAGSNMTFSPSQNGTSLD  1021


 Score =  501 bits (1891),  Expect = 5e-143, Method: Compositional matrix adjust.
 Identities = 391/476 (83%), Positives = 430/476 (91%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNDGTLTNHDNQIVLGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETVNDGTLTNHDNQIV+GTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTIN NGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGYALDTTLNGGNQYVHNGGTASGTVVNSDGWQIVKEGGLADFTIVNQKGKLQVNAG  300
            QTVHG ALDTTLNGG QYVHNGGTASGTVVNSDGWQIVK+GG+A+ T VNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTLKQGGALVTSTAATVTG NRLG F+V +G+AD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

49) ECH74115_1395 in NC_011353


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  640 bits (2418),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/862 (57%), Positives = 637/862 (74%), Gaps = 79/862 (9%)

Query  78    GTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDG  137
             + A +  ++TG E GPD+E+   GQ +  +++   TT+  NGRQ+V   GTA+ TV+  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   GGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGP  197
             G+Q+++G A++TTLN  G Q VH+GG A+GT++N DG Q VK+GG+A  T +N    G  
Sbjct  264   GDQTVHGHALDTTLNG-GYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVN--QKGRL  320

Query  198   DSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLNGGY  257
             + D +       GTA + T+++ G            +L+ + +        L     G++
Sbjct  321   QVDAG-------GTATNVTLKQGG------------ALVTSTAATVTGINRL-----GAF  356

Query  258   QYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGALVT  317
               V  +G A N V+++GG+  V +G +A NT +++ G L V+ GG AT+V+   GG L++
Sbjct  357   SVV--EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLA  414

Query  318   STAATVIGTNRLGN-FTVENGKADGVVLESGGRLDVLESHSAQNTLVDDG------GTLA  370
              ++A+V GT   G+ F++  G+AD+++LE G+ + +  +++A +T V++G      GTLA
Sbjct  415   DSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLA  474

Query  371   ----------VSAGGKAT---SVTITSGGALIADSGATVEGT---NASGKFSIDGTSGQA  414
                       ++ +GK+    ++TI  G+AL+ +++ T +G+   ++SG +++  T+   
Sbjct  475   GTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQ  534

Query  415   SGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVLN  467
              ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + +
Sbjct  535   KAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPD  592

Query  468   GDVVST--GDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKltttnltgqggtINMR  525
                V +  +D+ +AG+I+F   +T  + +  A  K ++           L GQ GTI++R
Sbjct  593   NATVQSVVDDLSHAGQIHFT--STRTGKFVPATLKVKN-----------LNGQNGTISLR  639

Query  526   VRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEGA  584
             VR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEEGA
Sbjct  640   VRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGA  699

Query  585   FALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQ  644
             F  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQ
Sbjct  700   FVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ  759

Query  645   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTT  704
             TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+
Sbjct  760   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTA  819

Query  705   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKAS  764
             GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKAS
Sbjct  820   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKAS  879

Query  765   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGS  824
             SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGS
Sbjct  880   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGS  939

Query  825   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDMS  884
             AQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSV ELPVNWWVQPSVIRTFSSRGDMS
Sbjct  940   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMS  999

Query  885   MGTAAAGSNMTFSPSRNGTSLD  906
             MGTAAAGSNMTFSPS+NGTSLD
Sbjct  1000  MGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  444 bits (1672),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 335/477 (71%), Positives = 395/477 (83%), Gaps = 6/477 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDKVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAAD VVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNDGTLTNHDNQIVFGTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGR  120
            ETVNDGTLTNHDNQIVFGTANGMTISTGLE GPD+E NTGGQWIQNGG A NTTVT  G 
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QVVLEGGTASDTVIRDGGGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKS  180
            Q V  GG+ SDTVI  GGGQSL+G AVNTTLN  GEQWVHE+G+ATGT+IN  G Q++KS
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAIKS  204

Query  181  GGLATGTIINTGAEGGPDSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGG  240
            G++AT+T++NTGAEGGPD++N+ TGQ V G A  TTINKNGRQI+   G A  T++YAGG
Sbjct  205  GAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGG  264

Query  241  DQSVHGRALNTTLNGGYQYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHA  300
            DQ+VHG+AL+TTLNGGYQYVH +G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V+A
Sbjct  265  DQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDA  324

Query  301  GGEATAVTQNTGGALVTSTAATVIGTNRLGNFTVENGKADGVVLESGGRLDVLESHSAQN  360
            GG AT VT + GGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL +H+A N
Sbjct  325  GGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATN  384

Query  361  TLVDDGGTLAVSAGGKATSVTITSGGALIADSGATVEGTNASGK-FSIDGTSGQASGLLL  419
            T VDDGGTL V  GG AT+V++ +GG L+ADSGA+V GT + GK FSI+G  GQA +L+L
Sbjct  385  TRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALML  442

Query  420  ENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  476
            E+G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  443  EKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

50) ECs1396 in NC_002695


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  640 bits (2418),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/862 (57%), Positives = 637/862 (74%), Gaps = 79/862 (9%)

Query  78    GTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDG  137
             + A +  ++TG E GPD+E+   GQ +  +++   TT+  NGRQ+V   GTA+ TV+  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   GGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGP  197
             G+Q+++G A++TTLN  G Q VH+GG A+GT++N DG Q VK+GG+A  T +N    G  
Sbjct  264   GDQTVHGHALDTTLNG-GYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVN--QKGRL  320

Query  198   DSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLNGGY  257
             + D +       GTA + T+++ G            +L+ + +        L     G++
Sbjct  321   QVDAG-------GTATNVTLKQGG------------ALVTSTAATVTGINRL-----GAF  356

Query  258   QYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGALVT  317
               V  +G A N V+++GG+  V +G +A NT +++ G L V+ GG AT+V+   GG L++
Sbjct  357   SVV--EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLA  414

Query  318   STAATVIGTNRLGN-FTVENGKADGVVLESGGRLDVLESHSAQNTLVDDG------GTLA  370
              ++A+V GT   G+ F++  G+AD+++LE G+ + +  +++A +T V++G      GTLA
Sbjct  415   DSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLA  474

Query  371   ----------VSAGGKAT---SVTITSGGALIADSGATVEGT---NASGKFSIDGTSGQA  414
                       ++ +GK+    ++TI  G+AL+ +++ T +G+   ++SG +++  T+   
Sbjct  475   GTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQ  534

Query  415   SGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVLN  467
              ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + +
Sbjct  535   KAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPD  592

Query  468   GDVVST--GDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKltttnltgqggtINMR  525
                V +  +D+ +AG+I+F   +T  + +  A  K ++           L GQ GTI++R
Sbjct  593   NATVQSVVDDLSHAGQIHFT--STRTGKFVPATLKVKN-----------LNGQNGTISLR  639

Query  526   VRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEGA  584
             VR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEEGA
Sbjct  640   VRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGA  699

Query  585   FALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQ  644
             F  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQ
Sbjct  700   FVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ  759

Query  645   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTT  704
             TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+
Sbjct  760   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTA  819

Query  705   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKAS  764
             GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKAS
Sbjct  820   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKAS  879

Query  765   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGS  824
             SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGS
Sbjct  880   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGS  939

Query  825   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDMS  884
             AQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSV ELPVNWWVQPSVIRTFSSRGDMS
Sbjct  940   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMS  999

Query  885   MGTAAAGSNMTFSPSRNGTSLD  906
             MGTAAAGSNMTFSPS+NGTSLD
Sbjct  1000  MGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  444 bits (1672),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 335/477 (71%), Positives = 395/477 (83%), Gaps = 6/477 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDKVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAAD VVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNDGTLTNHDNQIVFGTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGR  120
            ETVNDGTLTNHDNQIVFGTANGMTISTGLE GPD+E NTGGQWIQNGG A NTTVT  G 
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QVVLEGGTASDTVIRDGGGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKS  180
            Q V  GG+ SDTVI  GGGQSL+G AVNTTLN  GEQWVHE+G+ATGT+IN  G Q++KS
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAIKS  204

Query  181  GGLATGTIINTGAEGGPDSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGG  240
            G++AT+T++NTGAEGGPD++N+ TGQ V G A  TTINKNGRQI+   G A  T++YAGG
Sbjct  205  GAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGG  264

Query  241  DQSVHGRALNTTLNGGYQYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHA  300
            DQ+VHG+AL+TTLNGGYQYVH +G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V+A
Sbjct  265  DQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDA  324

Query  301  GGEATAVTQNTGGALVTSTAATVIGTNRLGNFTVENGKADGVVLESGGRLDVLESHSAQN  360
            GG AT VT + GGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL +H+A N
Sbjct  325  GGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATN  384

Query  361  TLVDDGGTLAVSAGGKATSVTITSGGALIADSGATVEGTNASGK-FSIDGTSGQASGLLL  419
            T VDDGGTL V  GG AT+V++ +GG L+ADSGA+V GT + GK FSI+G  GQA +L+L
Sbjct  385  TRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALML  442

Query  420  ENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  476
            E+G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  443  EKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

51) cah in NC_013008


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  640 bits (2418),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/862 (57%), Positives = 637/862 (74%), Gaps = 79/862 (9%)

Query  78    GTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDG  137
             + A +  ++TG E GPD+E+   GQ +  +++   TT+  NGRQ+V   GTA+ TV+  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   GGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGP  197
             G+Q+++G A++TTLN  G Q VH+GG A+GT++N DG Q VK+GG+A  T +N    G  
Sbjct  264   GDQTVHGHALDTTLNG-GYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVN--QKGRL  320

Query  198   DSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLNGGY  257
             + D +       GTA + T+++ G            +L+ + +        L     G++
Sbjct  321   QVDAG-------GTATNVTLKQGG------------ALVTSTAATVTGINRL-----GAF  356

Query  258   QYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGALVT  317
               V  +G A N V+++GG+  V +G +A NT +++ G L V+ GG AT+V+   GG L++
Sbjct  357   SVV--EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLA  414

Query  318   STAATVIGTNRLGN-FTVENGKADGVVLESGGRLDVLESHSAQNTLVDDG------GTLA  370
              ++A+V GT   G+ F++  G+AD+++LE G+ + +  +++A +T V++G      GTLA
Sbjct  415   DSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLA  474

Query  371   ----------VSAGGKAT---SVTITSGGALIADSGATVEGT---NASGKFSIDGTSGQA  414
                       ++ +GK+    ++TI  G+AL+ +++ T +G+   ++SG +++  T+   
Sbjct  475   GTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQ  534

Query  415   SGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVLN  467
              ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + +
Sbjct  535   KAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPD  592

Query  468   GDVVST--GDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKltttnltgqggtINMR  525
                V +  +D+ +AG+I+F   +T  + +  A  K ++           L GQ GTI++R
Sbjct  593   NATVQSVVDDLSHAGQIHFT--STRTGKFVPATLKVKN-----------LNGQNGTISLR  639

Query  526   VRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEGA  584
             VR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEEGA
Sbjct  640   VRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGA  699

Query  585   FALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQ  644
             F  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQ
Sbjct  700   FVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ  759

Query  645   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTT  704
             TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+
Sbjct  760   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTA  819

Query  705   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKAS  764
             GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKAS
Sbjct  820   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKAS  879

Query  765   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGS  824
             SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGS
Sbjct  880   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGS  939

Query  825   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDMS  884
             AQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSV ELPVNWWVQPSVIRTFSSRGDMS
Sbjct  940   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMS  999

Query  885   MGTAAAGSNMTFSPSRNGTSLD  906
             MGTAAAGSNMTFSPS+NGTSLD
Sbjct  1000  MGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  444 bits (1672),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 335/477 (71%), Positives = 395/477 (83%), Gaps = 6/477 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDKVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAAD VVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNDGTLTNHDNQIVFGTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGR  120
            ETVNDGTLTNHDNQIVFGTANGMTISTGLE GPD+E NTGGQWIQNGG A NTTVT  G 
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QVVLEGGTASDTVIRDGGGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKS  180
            Q V  GG+ SDTVI  GGGQSL+G AVNTTLN  GEQWVHE+G+ATGT+IN  G Q++KS
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAIKS  204

Query  181  GGLATGTIINTGAEGGPDSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGG  240
            G++AT+T++NTGAEGGPD++N+ TGQ V G A  TTINKNGRQI+   G A  T++YAGG
Sbjct  205  GAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGG  264

Query  241  DQSVHGRALNTTLNGGYQYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHA  300
            DQ+VHG+AL+TTLNGGYQYVH +G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V+A
Sbjct  265  DQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDA  324

Query  301  GGEATAVTQNTGGALVTSTAATVIGTNRLGNFTVENGKADGVVLESGGRLDVLESHSAQN  360
            GG AT VT + GGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL +H+A N
Sbjct  325  GGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATN  384

Query  361  TLVDDGGTLAVSAGGKATSVTITSGGALIADSGATVEGTNASGK-FSIDGTSGQASGLLL  419
            T VDDGGTL V  GG AT+V++ +GG L+ADSGA+V GT + GK FSI+G  GQA +L+L
Sbjct  385  TRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALML  442

Query  420  ENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  476
            E+G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  443  EKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

52) UMNK88_1274 in NC_017641


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  640 bits (2418),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/862 (57%), Positives = 637/862 (74%), Gaps = 79/862 (9%)

Query  78    GTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDG  137
             + A +  ++TG E GPD+E+   GQ +  +++   TT+  NGRQ+V   GTA+ TV+  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   GGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGP  197
             G+Q+++G A++TTLN  G Q VH+GG A+GT++N DG Q VK+GG+A  T +N    G  
Sbjct  264   GDQTVHGHALDTTLNG-GYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVN--QKGRL  320

Query  198   DSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLNGGY  257
             + D +       GTA + T+++ G            +L+ + +        L     G++
Sbjct  321   QVDAG-------GTATNVTLKQGG------------ALVTSTAATVTGINRL-----GAF  356

Query  258   QYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGALVT  317
               V  +G A N V+++GG+  V +G +A NT +++ G L V+ GG AT+V+   GG L++
Sbjct  357   SVV--EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLA  414

Query  318   STAATVIGTNRLGN-FTVENGKADGVVLESGGRLDVLESHSAQNTLVDDG------GTLA  370
              ++A+V GT   G+ F++  G+AD+++LE G+ + +  +++A +T V++G      GTLA
Sbjct  415   DSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLA  474

Query  371   ----------VSAGGKAT---SVTITSGGALIADSGATVEGT---NASGKFSIDGTSGQA  414
                       ++ +GK+    ++TI  G+AL+ +++ T +G+   ++SG +++  T+   
Sbjct  475   GTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQ  534

Query  415   SGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVLN  467
              ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + +
Sbjct  535   KAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPD  592

Query  468   GDVVST--GDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKltttnltgqggtINMR  525
                V +  +D+ +AG+I+F   +T  + +  A  K ++           L GQ GTI++R
Sbjct  593   NATVQSVVDDLSHAGQIHFT--STRTGKFVPATLKVKN-----------LNGQNGTISLR  639

Query  526   VRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEGA  584
             VR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEEGA
Sbjct  640   VRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGA  699

Query  585   FALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQ  644
             F  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQ
Sbjct  700   FVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ  759

Query  645   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTT  704
             TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+
Sbjct  760   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTA  819

Query  705   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKAS  764
             GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKAS
Sbjct  820   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKAS  879

Query  765   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGS  824
             SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGS
Sbjct  880   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGS  939

Query  825   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDMS  884
             AQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSV ELPVNWWVQPSVIRTFSSRGDMS
Sbjct  940   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMS  999

Query  885   MGTAAAGSNMTFSPSRNGTSLD  906
             MGTAAAGSNMTFSPS+NGTSLD
Sbjct  1000  MGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  444 bits (1672),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 335/477 (71%), Positives = 395/477 (83%), Gaps = 6/477 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDKVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAAD VVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNDGTLTNHDNQIVFGTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGR  120
            ETVNDGTLTNHDNQIVFGTANGMTISTGLE GPD+E NTGGQWIQNGG A NTTVT  G 
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QVVLEGGTASDTVIRDGGGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKS  180
            Q V  GG+ SDTVI  GGGQSL+G AVNTTLN  GEQWVHE+G+ATGT+IN  G Q++KS
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAIKS  204

Query  181  GGLATGTIINTGAEGGPDSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGG  240
            G++AT+T++NTGAEGGPD++N+ TGQ V G A  TTINKNGRQI+   G A  T++YAGG
Sbjct  205  GAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGG  264

Query  241  DQSVHGRALNTTLNGGYQYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHA  300
            DQ+VHG+AL+TTLNGGYQYVH +G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V+A
Sbjct  265  DQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDA  324

Query  301  GGEATAVTQNTGGALVTSTAATVIGTNRLGNFTVENGKADGVVLESGGRLDVLESHSAQN  360
            GG AT VT + GGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL +H+A N
Sbjct  325  GGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATN  384

Query  361  TLVDDGGTLAVSAGGKATSVTITSGGALIADSGATVEGTNASGK-FSIDGTSGQASGLLL  419
            T VDDGGTL V  GG AT+V++ +GG L+ADSGA+V GT + GK FSI+G  GQA +L+L
Sbjct  385  TRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALML  442

Query  420  ENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  476
            E+G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  443  EKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

53) CDCO157_1332 in NC_017906


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  640 bits (2418),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/862 (57%), Positives = 637/862 (74%), Gaps = 79/862 (9%)

Query  78    GTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDG  137
             + A +  ++TG E GPD+E+   GQ +  +++   TT+  NGRQ+V   GTA+ TV+  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   GGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGP  197
             G+Q+++G A++TTLN  G Q VH+GG A+GT++N DG Q VK+GG+A  T +N    G  
Sbjct  264   GDQTVHGHALDTTLNG-GYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVN--QKGRL  320

Query  198   DSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLNGGY  257
             + D +       GTA + T+++ G            +L+ + +        L     G++
Sbjct  321   QVDAG-------GTATNVTLKQGG------------ALVTSTAATVTGINRL-----GAF  356

Query  258   QYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGALVT  317
               V  +G A N V+++GG+  V +G +A NT +++ G L V+ GG AT+V+   GG L++
Sbjct  357   SVV--EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLA  414

Query  318   STAATVIGTNRLGN-FTVENGKADGVVLESGGRLDVLESHSAQNTLVDDG------GTLA  370
              ++A+V GT   G+ F++  G+AD+++LE G+ + +  +++A +T V++G      GTLA
Sbjct  415   DSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLA  474

Query  371   ----------VSAGGKAT---SVTITSGGALIADSGATVEGT---NASGKFSIDGTSGQA  414
                       ++ +GK+    ++TI  G+AL+ +++ T +G+   ++SG +++  T+   
Sbjct  475   GTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQ  534

Query  415   SGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVLN  467
              ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + +
Sbjct  535   KAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPD  592

Query  468   GDVVST--GDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKltttnltgqggtINMR  525
                V +  +D+ +AG+I+F   +T  + +  A  K ++           L GQ GTI++R
Sbjct  593   NATVQSVVDDLSHAGQIHFT--STRTGKFVPATLKVKN-----------LNGQNGTISLR  639

Query  526   VRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEGA  584
             VR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEEGA
Sbjct  640   VRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGA  699

Query  585   FALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQ  644
             F  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQ
Sbjct  700   FVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQ  759

Query  645   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTT  704
             TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+
Sbjct  760   TGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTA  819

Query  705   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKAS  764
             GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKAS
Sbjct  820   GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKAS  879

Query  765   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGS  824
             SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGS
Sbjct  880   SDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGS  939

Query  825   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGDMS  884
             AQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSV ELPVNWWVQPSVIRTFSSRGDMS
Sbjct  940   AQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMS  999

Query  885   MGTAAAGSNMTFSPSRNGTSLD  906
             MGTAAAGSNMTFSPS+NGTSLD
Sbjct  1000  MGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  444 bits (1672),  Expect = 1e-125, Method: Compositional matrix adjust.
 Identities = 335/477 (71%), Positives = 395/477 (83%), Gaps = 6/477 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDKVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAAD VVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNDGTLTNHDNQIVFGTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGR  120
            ETVNDGTLTNHDNQIVFGTANGMTISTGLE GPD+E NTGGQWIQNGG A NTTVT  G 
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QVVLEGGTASDTVIRDGGGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKS  180
            Q V  GG+ SDTVI  GGGQSL+G AVNTTLN  GEQWVHE+G+ATGT+IN  G Q++KS
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GEQWVHEDGIATGTVINEKGWQAIKS  204

Query  181  GGLATGTIINTGAEGGPDSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGG  240
            G++AT+T++NTGAEGGPD++N+ TGQ V G A  TTINKNGRQI+   G A  T++YAGG
Sbjct  205  GAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGG  264

Query  241  DQSVHGRALNTTLNGGYQYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHA  300
            DQ+VHG+AL+TTLNGGYQYVH +G A  TV+N +GWQ+VK GG AGNTT+NQ+G L+V+A
Sbjct  265  DQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDA  324

Query  301  GGEATAVTQNTGGALVTSTAATVIGTNRLGNFTVENGKADGVVLESGGRLDVLESHSAQN  360
            GG AT VT + GGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL +H+A N
Sbjct  325  GGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATN  384

Query  361  TLVDDGGTLAVSAGGKATSVTITSGGALIADSGATVEGTNASGK-FSIDGTSGQASGLLL  419
            T VDDGGTL V  GG AT+V++ +GG L+ADSGA+V GT + GK FSI+G  GQA +L+L
Sbjct  385  TRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALML  442

Query  420  ENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  476
            E+G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  443  EKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

54) flu in NC_017633


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  636 bits (2403),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 483/861 (57%), Positives = 620/861 (73%), Gaps = 78/861 (9%)

Query  119   GTTNGITISTGLEYGPDNEANTGGQWVQDGGTASNTTISSGGLQFVGAGGKATDTIINEG  178
             + + +  ++TG E GPD E    GQ V   G A  TTI+  G Q+V+A G A  T++  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVY--GDAVRTTINKNGRQIVAAEGTANTTVVYAG  263

Query  179   GGQSLKGLALNTTLNGGEQWMHEGAIATGTVINDKGWQVVKPGAVATDTVVNTGAEGGPD  238
             G+Q++ G AL+TTLNGG Q +H+G+ A+GTV+N  GWQ+VK G+VA +T VN    G  +
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVN--QKGRLQ  321

Query  239   AENADTGQFVRGDAVRTTINKNGRQIvvatgvanttvvyaggDQTVHGYALDTTLNGGNQ  298
              + +       G A   T+++ G  +  +++                     T +N    
Sbjct  322   VDAG-------GTATNVTLKQGGALVTSTAATV-------------------TGINRLGA  355

Query  299   YVHNGGTASDTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALVTS  358
             +    G A + V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GG L++ 
Sbjct  356   FSVVEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLAD  415

Query  359   TAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSAWKTLVD-------------  404
             ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A  T V+             
Sbjct  416   SGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAG  475

Query  405   -----DGGILAVSAGGKATD-VTMTSGGALIADSGATVEGT---NASGKFSIDGISGQAS  455
                  +G+IL++S+     D +T+  G+AL+ +++ T +G+   ++SG +++   +    
Sbjct  476   TTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQK  535

Query  456   GLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVLNG  508
             ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + + 
Sbjct  536   AVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDN  593

Query  509   DVVST--GDIVNAGEIHFDNQTTQDAVLSRAVAKSNSPVTFHKltttnltgqggtINMRV  566
               V +  +D+ +AG+IHF +  T   V          P T+      NL GQ GTI++RV
Sbjct  594   ATVQSVVDDLSHAGQIHFTSTRTGKFV----------PATLK---VKNLNGQNGTISLRV  640

Query  567   SLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAF  625
               D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF
Sbjct  641   RPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAF  700

Query  626   ALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQT  685
               +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSHQT
Sbjct  701   VQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQT  760

Query  686   GVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAG  745
             GVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAG
Sbjct  761   GVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAG  820

Query  746   VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKAST  805
             VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKAS+
Sbjct  821   VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASS  880

Query  806   DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSA  865
             DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSA
Sbjct  881   DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSA  940

Query  866   QHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSMRELPVNWWVQPSVIRTFSSRGDMSM  925
             QHVRAGFRLGSHNDMTFGEGTSSR  LR+SAKHS+RELPVNWWVQPSVIRTFSSRGDMSM
Sbjct  941   QHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSM  1000

Query  926   GTAAAGSNMTFSPSRNGTSLD  946
             GTAAAGSNMTFSPS+NGTSLD
Sbjct  1001  GTAAAGSNMTFSPSQNGTSLD  1021


 Score =  563 bits (2124),  Expect = 2e-161, Method: Compositional matrix adjust.
 Identities = 382/500 (77%), Positives = 442/500 (89%), Gaps = 5/500 (1%)

Query  18   LFCTCRYPLLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRTGV  77
            LFCTCRYP LWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKR+GV
Sbjct  2    LFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGV  61

Query  78   AVALSLATATSVPALAADSVVQAGETVSGGTLENHDNQIVFGTTNGITISTGLEYGPDNE  137
            AVALSLA+ TSVPALAAD+VVQAGETV++GTL NHDNQIVFGT+NG+TISTGLEYGPDNE
Sbjct  62   AVALSLAAVTSVPALAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNE  121

Query  138  ANTGGQWVQDGGTASNTTISSGGLQFVGAGGKATDTIINEGGGQSLKGLALNTTLNGGEQ  197
            ANTGGQW+Q+GGTA+NTT+++GGLQ V +GG  +DT+I+ GGGQSL+G A+NTTLNGGEQ
Sbjct  122  ANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQ  181

Query  198  WMHEGAIATGTVINDKGWQVVKPGAVATDTVVNTGAEGGPDAENADTGQFVRGDAVRTTI  257
            W+HE++IATGTVIN+KGWQ +K+GAVATDTVVNTGAEGGPDAEN+DTGQ V GDAVRTTI
Sbjct  182  WVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTI  241

Query  258  NKNGRQIvvatgvanttvvyaggDQTVHGYALDTTLNGGNQYVHNGGTASDTVVNSDGWQ  317
            NKNGRQIV A G ANTTVVYAGGDQTVHG ALDTTLNGG QYVHNGGTAS+TVVNSDGWQ
Sbjct  242  NKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQ  301

Query  318  IIKEGGLADFTTVNQKGKLQVNAGGTATNVTLKQGGALVTSTAATVLGSNRLGNFTVENG  377
            I+K+GG+A+ TTVNQKG+LQV+AGGTATNVTLKQGGALVTSTAATV G NRLG F+V +G
Sbjct  302  IVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEG  361

Query  378  KADGVVLESGGRLDVLEGHSAWKTLVDDGGILAVSAGGKATDVTMTSGGALIADSGATVE  437
            KAD VVLE+GGRLDVL GH+A +T VDDGG L V  GG AT V+M +GG L+ADSGA+V 
Sbjct  362  KADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVS  421

Query  438  GTNASGK-FSIDGISGQASGLLLENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRT  496
            GT + GK FSI+G  GQA +L+LE+G+SFT+NAG+ A +TTV   G L  A GG+L+G T
Sbjct  422  GTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTT  477

Query  497  QLSKGASMVLNGDVVSTGDI  516
             L++GA + L+G  V+ + +
Sbjct  478  TLNNGAILTLSGKTVNNDTL  497

55) flu in NC_013941


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  635 bits (2401),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 465/810 (58%), Positives = 596/810 (74%), Gaps = 60/810 (7%)

Query  121   QRVNTGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG  180
             Q V + G+ + TV+ AGG+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ +K+G
Sbjct  247   QIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNG  306

Query  181   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
             +VA +T                            T+N++GR  V A GTA    +  GG 
Sbjct  307   GVAGNT----------------------------TVNQKGRLQVDAGGTATNVTLKQGGA  338

Query  241   QTVHGHALDTTLN--GGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVN  298
                   A  T +N  G++  V+  G A   V++++G+  +  G  A  T V++ G L+V 
Sbjct  339   LVTSTAATVTGINRLGAFSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVR  396

Query  299   AGGTATNVTLKQGGALVSSTAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSA  357
              GGTAT V++ +GG L++ ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A
Sbjct  397   NGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTA  456

Query  358   WKTLVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQ  412
               T V++G  L  + GG  +G T  + GA+++ SG TV+    + +     +  ++++G+
Sbjct  457   TDTTVNGG--LFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGN  514

Query  413   ASGLLLENGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGNVVST  472
             +S +    +G++TV+    + ++   + GTL L  + +++      +G+++ L G+ V  
Sbjct  515   GS-VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLN  572

Query  473   GDIVNAGEIYFDNQTT---PDAVLSRAVAKG---NAPVTFH----------KLTTSNLTG  516
             G I ++ ++ + + +T   PD    ++V  +    + + F            L   NL G
Sbjct  573   GAI-DPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNG  631

Query  517   QGGTINMRVRLD-GSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQN  575
             Q GTI++RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A N
Sbjct  632   QNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAIN  691

Query  576   GATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRI  635
             GATTEEGAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRI
Sbjct  692   GATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRI  751

Query  636   LAGSRSHQSGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESNGSYGFVRLEGDLLRTE  695
             LAGSRSHQ+GV+GENNSVRLSIQGGHLGHDNNGGIARGATPES+GSYGFVRLEGDLLRTE
Sbjct  752   LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE  811

Query  696   VAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQG  755
             VAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQG
Sbjct  812   VAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQG  871

Query  756   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAG  815
             TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAG
Sbjct  872   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAG  931

Query  816   YVKFGHGSTQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNWWVQPSVIRT  875
             YVKFGHGS+QHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH+V ELPVNWWVQPSVIRT
Sbjct  932   YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRT  991

Query  876   FSSRGDMSMGTAAAGSNMTFSPSRNGTSLD  905
             FSSRGDMSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  992   FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  506 bits (1909),  Expect = 2e-144, Method: Compositional matrix adjust.
 Identities = 397/476 (84%), Positives = 436/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLVNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQnggtannttvtgggL  120
            ETV++GTL NHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNTGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG  180
            QRVN GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQAIKSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVSSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTLKQGGALV+STAATV G NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGNVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G+ V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

56) ECO55CA74_17450 in NC_017656


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  635 bits (2401),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 465/810 (58%), Positives = 596/810 (74%), Gaps = 60/810 (7%)

Query  121   QRVNTGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG  180
             Q V + G+ + TV+ AGG+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ +K+G
Sbjct  247   QIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNG  306

Query  181   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
             +VA +T                            T+N++GR  V A GTA    +  GG 
Sbjct  307   GVAGNT----------------------------TVNQKGRLQVDAGGTATNVTLKQGGA  338

Query  241   QTVHGHALDTTLN--GGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVN  298
                   A  T +N  G++  V+  G A   V++++G+  +  G  A  T V++ G L+V 
Sbjct  339   LVTSTAATVTGINRLGAFSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVR  396

Query  299   AGGTATNVTLKQGGALVSSTAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSA  357
              GGTAT V++ +GG L++ ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A
Sbjct  397   NGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTA  456

Query  358   WKTLVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQ  412
               T V++G  L  + GG  +G T  + GA+++ SG TV+    + +     +  ++++G+
Sbjct  457   TDTTVNGG--LFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGN  514

Query  413   ASGLLLENGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGNVVST  472
             +S +    +G++TV+    + ++   + GTL L  + +++      +G+++ L G+ V  
Sbjct  515   GS-VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLN  572

Query  473   GDIVNAGEIYFDNQTT---PDAVLSRAVAKG---NAPVTFH----------KLTTSNLTG  516
             G I ++ ++ + + +T   PD    ++V  +    + + F            L   NL G
Sbjct  573   GAI-DPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNG  631

Query  517   QGGTINMRVRLD-GSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQN  575
             Q GTI++RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A N
Sbjct  632   QNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAIN  691

Query  576   GATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRI  635
             GATTEEGAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRI
Sbjct  692   GATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRI  751

Query  636   LAGSRSHQSGVSGENNSVRLSIQGGHLGHDNNGGIARGATPESNGSYGFVRLEGDLLRTE  695
             LAGSRSHQ+GV+GENNSVRLSIQGGHLGHDNNGGIARGATPES+GSYGFVRLEGDLLRTE
Sbjct  752   LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE  811

Query  696   VAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQG  755
             VAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQG
Sbjct  812   VAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQG  871

Query  756   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAG  815
             TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAG
Sbjct  872   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAG  931

Query  816   YVKFGHGSTQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNWWVQPSVIRT  875
             YVKFGHGS+QHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH+V ELPVNWWVQPSVIRT
Sbjct  932   YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRT  991

Query  876   FSSRGDMSMGTAAAGSNMTFSPSRNGTSLD  905
             FSSRGDMSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  992   FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  506 bits (1909),  Expect = 2e-144, Method: Compositional matrix adjust.
 Identities = 397/476 (84%), Positives = 436/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLVNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQnggtannttvtgggL  120
            ETV++GTL NHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNTGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG  180
            QRVN GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQAIKSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVSSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTLKQGGALV+STAATV G NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGNVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G+ V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

57) Z1211 in NC_002655


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  635 bits (2401),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/864 (57%), Positives = 636/864 (74%), Gaps = 83/864 (9%)

Query  134   GTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDG  193
             + A +  ++TG E GPD+E+   GQ +  +++   TT+  NGRQ+V   GTA+ TV+  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  194   GGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGP  253
             G+Q+++G A++TTLN  G Q VH+GG A+GT++N DG Q VK+GG+A             
Sbjct  264   GDQTVHGHALDTTLNG-GYQYVHNGGTASGTVVNSDGWQIVKNGGVA-------------  309

Query  254   DSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLN--G  311
                             +TT+N++GR  +  +G A +  +  GG       A  T +N  G
Sbjct  310   ---------------GNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLG  354

Query  312   GYQYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGAL  371
             ++  V  +G A N V+++GG+  V +G +A NT +++ G L V+ GG AT+V+   GG L
Sbjct  355   AFSVV--EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVL  412

Query  372   VTSTAATVIGTNRLGN-FTVENGKADGVVLESGGRLDVLESHSAQNTLVDDG------GT  424
             ++ ++A+V GT   G+ F++  G+AD+++LE G+ + +  +++A +T V++G      GT
Sbjct  413   LADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGT  472

Query  425   LAVSA----------GGKAT---SVTITSGGALIADSGATVEGT---NASGKFSIDGTSG  468
             LA ++          +GK+    ++TI  G+AL+ +++ T +G+   ++SG +++  T+ 
Sbjct  473   LAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTL  532

Query  469   QASGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MV  521
                ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  +
Sbjct  533   TQKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNI  590

Query  522   LNGDVVST--GDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKltttnltgqggtIN  579
              +   V +  +D+ +AG+I+F   +T  + +  A  K ++           L GQ GTI+
Sbjct  591   PDNATVQSVVDDLSHAGQIHFT--STRTGKFVPATLKVKN-----------LNGQNGTIS  637

Query  580   MRVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEE  638
             +RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEE
Sbjct  638   LRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEE  697

Query  639   GAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRS  698
             GAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRS
Sbjct  698   GAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRS  757

Query  699   HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSL  758
             HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+
Sbjct  758   HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSV  817

Query  759   TTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMK  818
             T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMK
Sbjct  818   TAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMK  877

Query  819   ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGH  878
             ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGH
Sbjct  878   ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGH  937

Query  879   GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGD  938
             GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSV ELPVNWWVQPSVIRTFSSRGD
Sbjct  938   GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGD  997

Query  939   MSMGTAAAGSNMTFSPSRNGTSLD  962
             MSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  998   MSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  504 bits (1901),  Expect = 9e-144, Method: Compositional matrix adjust.
 Identities = 358/501 (72%), Positives = 418/501 (84%), Gaps = 6/501 (1%)

Query  33   LFCTCRYPLLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRagv  92
            LFCTCRYP LWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGV
Sbjct  2    LFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGV  61

Query  93   avalslaavtsvpalaaDKVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLELGPDSE  152
            AVALSLAAVTSVPALAAD VVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLE GPD+E
Sbjct  62   AVALSLAAVTSVPALAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNE  121

Query  153  ENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDGGGQSLNGLAVNTTLNNRGE  212
             NTGGQWIQNGG A NTTVT  G Q V  GG+ SDTVI  GGGQSL+G AVNTTLN  GE
Sbjct  122  ANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GE  180

Query  213  QWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGPDSDNSYTGQKVQGTAESTT  272
            QWVHE+G+ATGT+IN  G Q++KSG++AT+T++NTGAEGGPD++N+ TGQ V G A  TT
Sbjct  181  QWVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTT  240

Query  273  INKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLNGGYQYVHRDGLALNTVINEGGW  332
            INKNGRQI+   G A  T++YAGGDQ+VHG+AL+TTLNGGYQYVH +G A  TV+N +GW
Sbjct  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGW  300

Query  333  QVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGALVTSTAATVIGTNRLGNFTVEN  392
            Q+VK GG AGNTT+NQ+G L+V+AGG AT VT + GGALVTSTAATV G NRLG F+V +
Sbjct  301  QIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVE  360

Query  393  GKADGVVLESGGRLDVLESHSAQNTLVDDGGTLAVSAGGKATSVTITSGGALIADSGATV  452
            GKAD VVLE+GGRLDVL +H+A NT VDDGGTL V  GG AT+V++ +GG L+ADSGA+V
Sbjct  361  GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  453  EGTNASGK-FSIDGTSGQASGLLLENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGR  511
             GT + GK FSI+G  GQA +L+LE+G+SFT+NAG+ A +TTV   G L  A GG+L+G 
Sbjct  421  SGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGT  476

Query  512  TQLSKGASMVLNGDVVSTGDI  532
            T L++GA + L+G  V+ + +
Sbjct  477  TTLNNGAILTLSGKTVNNDTL  497

58) Z1651 in NC_002655


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  635 bits (2401),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/864 (57%), Positives = 636/864 (74%), Gaps = 83/864 (9%)

Query  134   GTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDG  193
             + A +  ++TG E GPD+E+   GQ +  +++   TT+  NGRQ+V   GTA+ TV+  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  194   GGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGP  253
             G+Q+++G A++TTLN  G Q VH+GG A+GT++N DG Q VK+GG+A             
Sbjct  264   GDQTVHGHALDTTLNG-GYQYVHNGGTASGTVVNSDGWQIVKNGGVA-------------  309

Query  254   DSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLN--G  311
                             +TT+N++GR  +  +G A +  +  GG       A  T +N  G
Sbjct  310   ---------------GNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLG  354

Query  312   GYQYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGAL  371
             ++  V  +G A N V+++GG+  V +G +A NT +++ G L V+ GG AT+V+   GG L
Sbjct  355   AFSVV--EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVL  412

Query  372   VTSTAATVIGTNRLGN-FTVENGKADGVVLESGGRLDVLESHSAQNTLVDDG------GT  424
             ++ ++A+V GT   G+ F++  G+AD+++LE G+ + +  +++A +T V++G      GT
Sbjct  413   LADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGT  472

Query  425   LAVSA----------GGKAT---SVTITSGGALIADSGATVEGT---NASGKFSIDGTSG  468
             LA ++          +GK+    ++TI  G+AL+ +++ T +G+   ++SG +++  T+ 
Sbjct  473   LAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTL  532

Query  469   QASGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MV  521
                ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  +
Sbjct  533   TQKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNI  590

Query  522   LNGDVVST--GDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKltttnltgqggtIN  579
              +   V +  +D+ +AG+I+F   +T  + +  A  K ++           L GQ GTI+
Sbjct  591   PDNATVQSVVDDLSHAGQIHFT--STRTGKFVPATLKVKN-----------LNGQNGTIS  637

Query  580   MRVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEE  638
             +RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEE
Sbjct  638   LRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEE  697

Query  639   GAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRS  698
             GAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRS
Sbjct  698   GAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRS  757

Query  699   HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSL  758
             HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+
Sbjct  758   HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSV  817

Query  759   TTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMK  818
             T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMK
Sbjct  818   TAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMK  877

Query  819   ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGH  878
             ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGH
Sbjct  878   ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGH  937

Query  879   GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGD  938
             GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSV ELPVNWWVQPSVIRTFSSRGD
Sbjct  938   GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGD  997

Query  939   MSMGTAAAGSNMTFSPSRNGTSLD  962
             MSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  998   MSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  504 bits (1901),  Expect = 9e-144, Method: Compositional matrix adjust.
 Identities = 358/501 (72%), Positives = 418/501 (84%), Gaps = 6/501 (1%)

Query  33   LFCTCRYPLLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRagv  92
            LFCTCRYP LWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGV
Sbjct  2    LFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGV  61

Query  93   avalslaavtsvpalaaDKVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLELGPDSE  152
            AVALSLAAVTSVPALAAD VVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLE GPD+E
Sbjct  62   AVALSLAAVTSVPALAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNE  121

Query  153  ENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDGGGQSLNGLAVNTTLNNRGE  212
             NTGGQWIQNGG A NTTVT  G Q V  GG+ SDTVI  GGGQSL+G AVNTTLN  GE
Sbjct  122  ANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GE  180

Query  213  QWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGPDSDNSYTGQKVQGTAESTT  272
            QWVHE+G+ATGT+IN  G Q++KSG++AT+T++NTGAEGGPD++N+ TGQ V G A  TT
Sbjct  181  QWVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTT  240

Query  273  INKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLNGGYQYVHRDGLALNTVINEGGW  332
            INKNGRQI+   G A  T++YAGGDQ+VHG+AL+TTLNGGYQYVH +G A  TV+N +GW
Sbjct  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGW  300

Query  333  QVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGALVTSTAATVIGTNRLGNFTVEN  392
            Q+VK GG AGNTT+NQ+G L+V+AGG AT VT + GGALVTSTAATV G NRLG F+V +
Sbjct  301  QIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVE  360

Query  393  GKADGVVLESGGRLDVLESHSAQNTLVDDGGTLAVSAGGKATSVTITSGGALIADSGATV  452
            GKAD VVLE+GGRLDVL +H+A NT VDDGGTL V  GG AT+V++ +GG L+ADSGA+V
Sbjct  361  GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  453  EGTNASGK-FSIDGTSGQASGLLLENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGR  511
             GT + GK FSI+G  GQA +L+LE+G+SFT+NAG+ A +TTV   G L  A GG+L+G 
Sbjct  421  SGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGT  476

Query  512  TQLSKGASMVLNGDVVSTGDI  532
            T L++GA + L+G  V+ + +
Sbjct  477  TTLNNGAILTLSGKTVNNDTL  497

59) ECO26_1353 in NC_013361


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  635 bits (2401),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/864 (57%), Positives = 636/864 (74%), Gaps = 83/864 (9%)

Query  134   GTANGMTISTGLELGPDSEENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDG  193
             + A +  ++TG E GPD+E+   GQ +  +++   TT+  NGRQ+V   GTA+ TV+  G
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  194   GGQSLNGLAVNTTLNNRGEQWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGP  253
             G+Q+++G A++TTLN  G Q VH+GG A+GT++N DG Q VK+GG+A             
Sbjct  264   GDQTVHGHALDTTLNG-GYQYVHNGGTASGTVVNSDGWQIVKNGGVA-------------  309

Query  254   DSDNSYTGQKVQGTAESTTINKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLN--G  311
                             +TT+N++GR  +  +G A +  +  GG       A  T +N  G
Sbjct  310   ---------------GNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLG  354

Query  312   GYQYVHRDGLALNTVINEGGWQVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGAL  371
             ++  V  +G A N V+++GG+  V +G +A NT +++ G L V+ GG AT+V+   GG L
Sbjct  355   AFSVV--EGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVL  412

Query  372   VTSTAATVIGTNRLGN-FTVENGKADGVVLESGGRLDVLESHSAQNTLVDDG------GT  424
             ++ ++A+V GT   G+ F++  G+AD+++LE G+ + +  +++A +T V++G      GT
Sbjct  413   LADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGT  472

Query  425   LAVSA----------GGKAT---SVTITSGGALIADSGATVEGT---NASGKFSIDGTSG  468
             LA ++          +GK+    ++TI  G+AL+ +++ T +G+   ++SG +++  T+ 
Sbjct  473   LAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTL  532

Query  469   QASGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MV  521
                ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  +
Sbjct  533   TQKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNI  590

Query  522   LNGDVVST--GDIVNAGEIRFDNQTTPNAALSRAVAKSNSPVTFHKltttnltgqggtIN  579
              +   V +  +D+ +AG+I+F   +T  + +  A  K ++           L GQ GTI+
Sbjct  591   PDNATVQSVVDDLSHAGQIHFT--STRTGKFVPATLKVKN-----------LNGQNGTIS  637

Query  580   MRVRLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEE  638
             +RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEE
Sbjct  638   LRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEE  697

Query  639   GAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRS  698
             GAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRS
Sbjct  698   GAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRS  757

Query  699   HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSL  758
             HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+
Sbjct  758   HQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSV  817

Query  759   TTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMK  818
             T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMK
Sbjct  818   TAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMK  877

Query  819   ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGH  878
             ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGH
Sbjct  878   ASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGH  937

Query  879   GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHSVSELPVNWWVQPSVIRTFSSRGD  938
             GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKHSV ELPVNWWVQPSVIRTFSSRGD
Sbjct  938   GSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGD  997

Query  939   MSMGTAAAGSNMTFSPSRNGTSLD  962
             MSMGTAAAGSNMTFSPS+NGTSLD
Sbjct  998   MSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  504 bits (1901),  Expect = 9e-144, Method: Compositional matrix adjust.
 Identities = 358/501 (72%), Positives = 418/501 (84%), Gaps = 6/501 (1%)

Query  33   LFCTCRYPLLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRagv  92
            LFCTCRYP LWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGV
Sbjct  2    LFCTCRYPHLWVPAFLFTLCKEKLMKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGV  61

Query  93   avalslaavtsvpalaaDKVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLELGPDSE  152
            AVALSLAAVTSVPALAAD VVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLE GPD+E
Sbjct  62   AVALSLAAVTSVPALAADTVVQAGETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNE  121

Query  153  ENTGGQWIQNGGIAGNTTVTTNGRQVVLEGGTASDTVIRDGGGQSLNGLAVNTTLNNRGE  212
             NTGGQWIQNGG A NTTVT  G Q V  GG+ SDTVI  GGGQSL+G AVNTTLN  GE
Sbjct  122  ANTGGQWIQNGGTANNTTVTGGGLQRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNG-GE  180

Query  213  QWVHEGGVATGTIINRDGYQSVKSGGLATGTIINTGAEGGPDSDNSYTGQKVQGTAESTT  272
            QWVHE+G+ATGT+IN  G Q++KSG++AT+T++NTGAEGGPD++N+ TGQ V G A  TT
Sbjct  181  QWVHEDGIATGTVINEKGWQAIKSGAVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTT  240

Query  273  INKNGRQIILFSGLARDTLIYAGGDQSVHGRALNTTLNGGYQYVHRDGLALNTVINEGGW  332
            INKNGRQI+   G A  T++YAGGDQ+VHG+AL+TTLNGGYQYVH +G A  TV+N +GW
Sbjct  241  INKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGW  300

Query  333  QVVKAGGAAGNTTINQNGELRVHAGGEATAVTQNTGGALVTSTAATVIGTNRLGNFTVEN  392
            Q+VK GG AGNTT+NQ+G L+V+AGG AT VT + GGALVTSTAATV G NRLG F+V +
Sbjct  301  QIVKNGGVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSVVE  360

Query  393  GKADGVVLESGGRLDVLESHSAQNTLVDDGGTLAVSAGGKATSVTITSGGALIADSGATV  452
            GKAD VVLE+GGRLDVL +H+A NT VDDGGTL V  GG AT+V++ +GG L+ADSGA+V
Sbjct  361  GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAV  420

Query  453  EGTNASGK-FSIDGTSGQASGLLLENGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGR  511
             GT + GK FSI+G  GQA +L+LE+G+SFT+NAG+ A +TTV   G L  A GG+L+G 
Sbjct  421  SGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGT  476

Query  512  TQLSKGASMVLNGDVVSTGDI  532
            T L++GA + L+G  V+ + +
Sbjct  477  TTLNNGAILTLSGKTVNNDTL  497

60) ECO26_3415 in NC_013361


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  632 bits (2389),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/863 (57%), Positives = 627/863 (73%), Gaps = 82/863 (9%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATVTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+ TV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQNVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATHVTLKQGGALV  315
             +  V+  G A   V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSAQKTRVDDG------GTL  368
             + ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G      GTL
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTL  473

Query  369   A----------VSAGGKATD---VTMTSGGALIADSGATVEGT---NASGKFSIDGISGQ  412
             A          ++ +GK+ +   +T+  G+AL+ +++ T +G+   ++SG +++   +  
Sbjct  474   AGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLT  533

Query  413   ASGLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVL  465
               ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + 
Sbjct  534   QKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIP  591

Query  466   NGDVVST--GDIVNAGEIHFDNQTTQDAVLSRAVAKGDSPVTFHKltttnltgqggtINM  523
             +   V +  +D+ +AG+IHF +  T   V          P T+      NL GQ GTI++
Sbjct  592   DNATVQSVVDDLSHAGQIHFTSTRTGKFV----------PATLK---VKNLNGQNGTISL  638

Query  524   RVRLD-GSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVATTGQGIRVVDAQNGATTEEG  582
             RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+ATTG+GI+VV+A NGATTEEG
Sbjct  639   RVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEG  698

Query  583   AFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH  642
             AF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH
Sbjct  699   AFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH  758

Query  643   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLT  702
             QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T
Sbjct  759   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVT  818

Query  703   TGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLVHTSSGLWADIVAQGTRHSMKA  762
             +GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL+H +SGLWADIVAQGTRHSMKA
Sbjct  819   AGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKA  878

Query  763   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHG  822
             SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHG
Sbjct  879   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHG  938

Query  823   SAQHVRAGFRLGSHNDMNFGKGTSSRDTLRDSAKHSVRELPVNWWVQPSVIRTFSSRGDM  882
             SAQHVRAGFRLGSHNDM FG GTSSRDTLR+SAKHSVRELPVNWWVQPSVIRTFSSRGDM
Sbjct  939   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM  998

Query  883   SMGTAAAGSNMTFSPSRNGTSLD  905
             SMGTAAAGSNMTFSPS+NGTSLD
Sbjct  999   SMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  527 bits (1990),  Expect = 8e-151, Method: Compositional matrix adjust.
 Identities = 395/476 (83%), Positives = 434/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNGGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETVN+GTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATVTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIAT TVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQNVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ VYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATHVTLKQGGALVTSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAQKT  360
            GTAT+VTLKQGGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  RVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
            RVDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

61) ECO103_4895 in NC_013353


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  631 bits (2386),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 463/810 (58%), Positives = 595/810 (74%), Gaps = 60/810 (7%)

Query  121   QRVNTGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG  180
             Q V + G+ + TV+ AGG+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ +K+G
Sbjct  247   QIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNG  306

Query  181   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
             +VA +T                            T+N++GR  V A GTA    +  GG 
Sbjct  307   GVAGNT----------------------------TVNQKGRLQVDAGGTATNVTLKQGGA  338

Query  241   QTVHGHALDTTLN--GGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVN  298
                   A  T +N  G++  V+  G A   V++++G+  +  G  A  T V++ G L+V 
Sbjct  339   LVTSTAATVTGINRLGAFSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVR  396

Query  299   AGGTATNVTLKQGGALVTSTAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSA  357
              GGTAT V++ +GG L++ ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A
Sbjct  397   NGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTA  456

Query  358   WKTLVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK-----FSIDGISGQ  412
               T V++G  L  + GG  +G T  + GA+++ SG TV+    + +     +  ++++G+
Sbjct  457   TDTTVNGG--LFTARGGTLAGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGN  514

Query  413   ASGLLLENGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGDVVST  472
             +S +    +G++TV+    + ++   + GTL L  + +++      +G+++ L G  V  
Sbjct  515   GS-VEKSGSGTLTVSNTTLTQKAVNLNEGTLTLNDS-TVTTDVIAQRGTALKLTGSTVLN  572

Query  473   GDIVNAGEIYFDNQTT---PDAVLSRAVAKG---NAPVTFH----------KLTTSNLTG  516
             G I ++ ++ + + +T   PD    ++V  +    + + F            L   NL G
Sbjct  573   GAI-DPTNVTLASGATWNIPDNATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNG  631

Query  517   QGGTINMRVRLD-GSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQN  575
             Q GTI++RVR D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A N
Sbjct  632   QNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAIN  691

Query  576   GATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRI  635
             GATTEEGAF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRI
Sbjct  692   GATTEEGAFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRI  751

Query  636   LAGSRSHQSGVSGENNSVRLSIQGGHLGHDNNSGIARGATPESNGSYGFVRLEGDLLRTE  695
             LAGSRSHQ+GV+GENNSVRLSIQGGHLGHDNN+GIARGATPES+GSYGFVRLEGDLLRTE
Sbjct  752   LAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTE  811

Query  696   VAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQG  755
             VAGMS+T+GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQG
Sbjct  812   VAGMSVTAGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQG  871

Query  756   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAG  815
             TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAG
Sbjct  872   TRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAG  931

Query  816   YVKFGHGSTQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNWWVQPSVIRT  875
             YVKFGHGS+QHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH+V ELPVNWWVQPSVIRT
Sbjct  932   YVKFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRT  991

Query  876   FSSRGDLSMGTAAAGSNMTFSPSRNGTSLD  905
             FSSRGD+SMGTAAAGSNMTFSPS+NGTSLD
Sbjct  992   FSSRGDMSMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  505 bits (1906),  Expect = 4e-144, Method: Compositional matrix adjust.
 Identities = 398/476 (84%), Positives = 435/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLVNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQnggtannttvtgggL  120
            ETV++GTL NHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNTGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAIKSG  180
            QRVN GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQAIKSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTLKQGGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

62) UMNK88_3699 in NC_017641


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  631 bits (2386),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/861 (57%), Positives = 623/861 (73%), Gaps = 78/861 (9%)

Query  78    GTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  ++TG E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGDQTVHGYALDTTLNGGNQ  257
                              T+N++GR  V A GTA    +  GG       A  T +N    
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  258   YVHNGGTASGTVVNSDGWQIVKEGGLADFTIVNQKGKLQVNAGGTATNVTLKQGGALVTS  317
             +    G A   V++++G+  V  G  A  T V++ G L+V  GGTAT V++ +GG L++ 
Sbjct  356   FSVVEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLAD  415

Query  318   TAATVTGSNRLGN-FTVENGNADGVVLESGGRLDVLEGHSAWKTLVDDG------GTLA-  369
             ++A+V+G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G      GTLA 
Sbjct  416   SGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLAG  475

Query  370   ---------VSAGGKATD---VTMTSGGALIADSGATVEGT---NASGKFSIDGISGQAS  414
                      ++ +GK+ +   +T+  G+AL+ +++ T +G+   ++SG +++   +    
Sbjct  476   TTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQK  535

Query  415   GLLLENGGSFTVNAGGQAGNTTVGHRGT-LTLAAGGSLSGRTQ-----LSKGAS-MVLNG  467
             ++ L++G ++T+N +  + +  +++RGT L L+++  L+G  +     L+ GA+  + + 
Sbjct  536   AVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDN  593

Query  468   DVVSTC--DIVNAGEIHFDNQTTQDAVLSRAVAKGDSPVTFHKltttnltgqggtINMRV  525
               V +   D+ +AG+IHF +  T   V          P T+      NL GQ GTI++RV
Sbjct  594   ATVQSVVDDLSHAGQIHFTSTRTGKFV----------PATLK---VKNLNGQNGTISLRV  640

Query  526   RLD-GSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEGAF  584
             R D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEGAF
Sbjct  641   RPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAF  700

Query  585   ALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQT  644
               +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQT
Sbjct  701   VQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQT  760

Query  645   GVSGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTG  704
             GV+GENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T+G
Sbjct  761   GVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAG  820

Query  705   VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKASS  764
             VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKASS
Sbjct  821   VYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASS  880

Query  765   DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGQDNAGYVKFGHGSA  824
             DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDG+DNAGYVKFGHGSA
Sbjct  881   DNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSA  940

Query  825   QHVRAGFRLGSHNDMTFGEGTSSRDTLRDSAKHRVSELPVNWWVQPSVIRTFSSRGDMSM  884
             QHVRAGFRLGSHNDMTFGEGTSSRDTLR+SAKH V ELPVNWWVQPSVIRTFSSRGDMSM
Sbjct  941   QHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSM  1000

Query  885   GTAAAGSNMTFSPSQNGTSLD  905
             GTAAAGSNMTFSPSQNGTSLD
Sbjct  1001  GTAAAGSNMTFSPSQNGTSLD  1021


 Score =  504 bits (1901),  Expect = 8e-144, Method: Compositional matrix adjust.
 Identities = 392/473 (83%), Positives = 428/473 (91%), Gaps = 5/473 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRagvavalslaavtsvpalaaDTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTIN NGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGYALDTTLNGGNQYVHNGGTASGTVVNSDGWQIVKEGGLADFTIVNQKGKLQVNAG  300
            QTVHG ALDTTLNGG QYVHNGGTASGTVVNSDGWQIVK+GG+A+ T VNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATNVTLKQGGALVTSTAATVTGSNRLGNFTVENGNADGVVLESGGRLDVLEGHSAWKT  360
            GTATNVTLKQGGALVTSTAATVTG NRLG F+V +G+AD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  LVDDGGTLAVSAGGKATDVTMTSGGALIADSGATVEGTNASGK-FSIDGISGQASGLLLE  419
             VDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQAGNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVST  472
            +G+SFT+NAG+ A +TTV   G L  A GG+L+G T L++GA + L+G  V+ 
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNN  494

63) ETEC_2119 in NC_017633


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  630 bits (2379),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 487/863 (57%), Positives = 628/863 (73%), Gaps = 82/863 (9%)

Query  78    GTANGMTISSGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVIsag  137
             + A +  +++G E GPD E    GQ +  +++   TT+   G Q V A G+ + TV+ AG
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAV--RTTINKNGRQIVAAEGTANTTVVYAG  263

Query  138   ggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSGAMATDTVVNTGAEGGPD  197
             G+Q+++G+A++TTLNGG Q VH+GG A+GTV+N  GWQ VK+G++A +T           
Sbjct  264   GDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNT-----------  312

Query  198   AENGDTGQFVRGNAVRTTINKNGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLN--GG  255
                              T+N++GR  V A GTA    +  GG       A  T +N  G+
Sbjct  313   -----------------TVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGA  355

Query  256   YQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATHVTLKQGGALV  315
             +  V+  G A   V++++G+  +  G  A  T V++ G L+V  GGTAT V++ +GG L+
Sbjct  356   FSVVE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLL  413

Query  316   TSTAATVLGSNRLGN-FTVENGKADGVVLESGGRLDVLEGHSAQKTRVDDG------GTL  368
             + ++A+V G+   G+ F++  G+AD+++LE G+ + +  G++A  T V++G      GTL
Sbjct  414   ADSGAAVSGTRSDGKAFSIGGGQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTL  473

Query  369   A----------VSAGGKATG---VTMTSGGALIADSGATVEGT---NASGKFSIDGTSGQ  412
             A          ++ +GK+     +T+  G+AL+ +++ T +G+   ++SG +++  T+  
Sbjct  474   AGTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLT  533

Query  413   ASGLLLENGGSFTVNAGGQASNTTVGHRGT-LMLAAGGSLSGRTQ-----LSKGAS-MVL  465
               ++ L++G ++T+N +  +++  +++RGT L L+++  L+G  +     L+ GA+  + 
Sbjct  534   QKAVNLNEG-TLTLNDSTVTTDV-IAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIP  591

Query  466   NGDVVST--GDIVNAGEIHFDNQTTQDAVLSRAVAKSNSPVTFHKltttnltgqggtINM  523
             +   V +  +D+ +AG+IHF +  T   V          P T+      NL GQ GTI++
Sbjct  592   DNATVQSVVDDLSHAGQIHFTSTRTGKFV----------PATLK---VKNLNGQNGTISL  638

Query  524   RVSLD-GSNASDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQGIRVVDAQNGATTEEG  582
             RV  D + N +D+LVI+GG+ATGKT L + N GNS  G+AT+G+GI+VV+A NGATTEEG
Sbjct  639   RVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEG  698

Query  583   AFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSH  642
             AF  +  LQAGAFNY+LNRDSDE WYLRSENAYRAEVPLY+SMLTQAMDYDRILAGSRSH
Sbjct  699   AFVQGNKLQAGAFNYSLNRDSDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSH  758

Query  643   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLT  702
             QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMS+T
Sbjct  759   QTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVT  818

Query  703   TGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKA  762
             +GVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL H +SGLWADIVAQGTRHSMKA
Sbjct  819   AGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKA  878

Query  763   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLHYTWQGLSLDDGQDNAGYVKFGHG  822
             SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQL+YTWQGLSLDDG+DNAGYVKFGHG
Sbjct  879   SSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHG  938

Query  823   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRDSTKHGVSELPVNWWVQPSVIRTFSSRGDM  882
             SAQHVRAGFRLGSHNDMTFGEGTSSRDTLR+S+KH+V ELPVNWWVQPSVIRTFSSRGDM
Sbjct  939   SAQHVRAGFRLGSHNDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDM  998

Query  883   SMGTAAAGSNMTFSPSRNGTSLD  905
             SMGTAAAGSNMTFSPS+NGTSLD
Sbjct  999   SMGTAAAGSNMTFSPSQNGTSLD  1021


 Score =  555 bits (2095),  Expect = 4e-159, Method: Compositional matrix adjust.
 Identities = 391/476 (83%), Positives = 435/476 (92%), Gaps = 5/476 (1%)

Query  1    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAIALSLAAVTSVPALAADTVVQAG  60
            MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVA+ALSLAAVTSVPALAADTVVQAG
Sbjct  26   MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61   ETVSGGTLTNHDNQIVFGTANGMTISSGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGL  120
            ETV++GTLTNHDNQIVFGTANGMTIS+GLEYGPDNEANTGGQWIQNGG ANNTTVTGGGL
Sbjct  86   ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  121  QRVNAGGSVSDTVIsagggqslqgqaVNTTLNGGEQWVHEGGIATGTVINEKGWQAVKSG  180
            QRVN+GGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE+GIATGTVINEKGWQA+KSG
Sbjct  146  QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  181  AMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINKNGRQIVAAEGTANTTVVYAGGD  240
            A+ATDTVVNTGAEGGPDAENGDTGQ V G+AVRTTINKNGRQIVAAEGTANTTVVYAGGD
Sbjct  206  AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  241  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAG  300
            QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQI+K+GG+A+ TTVNQKG+LQV+AG
Sbjct  266  QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNGGVAGNTTVNQKGRLQVDAG  325

Query  301  GTATHVTLKQGGALVTSTAATVLGSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAQKT  360
            GTAT+VTLKQGGALVTSTAATV G NRLG F+V +GKAD VVLE+GGRLDVL GH+A +T
Sbjct  326  GTATNVTLKQGGALVTSTAATVTGINRLGAFSVVEGKADNVVLENGGRLDVLTGHTATNT  385

Query  361  RVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK-FSIDGTSGQASGLLLE  419
            RVDDGGTL V  GG AT V+M +GG L+ADSGA+V GT + GK FSI+G  GQA +L+LE
Sbjct  386  RVDDGGTLDVRNGGTATTVSMGNGGVLLADSGAAVSGTRSDGKAFSIGG--GQADALMLE  443

Query  420  NGGSFTVNAGGQASNTTVGHRGTLMLAAGGSLSGRTQLSKGASMVLNGDVVSTGDI  475
            +G+SFT+NAG+ A++TTV   G L  A GG+L+G T L++GA + L+G  V+ + +
Sbjct  444  KGSSFTLNAGDTATDTTV--NGGLFTARGGTLAGTTTLNNGAILTLSGKTVNNDTL  497

64) CFSAN002050_05940 in NC_021818


> AJ303141|36|G35|57434421|CAI43838.1|Escherichia_coli_RW1374|+|49960..53127|flu|-|antigen 
43
Length=1055

 Score =  619 bits (2339),  Expect = 2e-178, Method: Compositional matrix adjust.
 Identities = 487/1029 (48%), Positives = 711/1029 (70%), Gaps = 69/1029 (6%)

Query  1     MKRGLNTSYRLVWNTVQGAFVVVSELAKANGKRasavlvaaglvvsPIVMAEETTSVPFG  60
             MKR LNTSYRLVWN + G++VV SELA++ GKRA+  +  +   V+++      T V  G
Sbjct  26    MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVALSLAAVTSVPALAADTVVQAG  85

Query  61    EVVNGAVIDNHDTQRVSGETNDTVINTGL--GPdsegngggqgvedggvsnRTTINDGGL  118
             E VN++ + NHD Q V G +N+  I+TGL  GPD+E+N GGQ +++GG +N TT+ +GGL
Sbjct  86    ETVNDGTLTNHDNQIVFGTANGMTISTGLEYGPDNEANTGGQWIQNGGTANNTTVTGGGL  145

Query  119   QWVDAGGLATDTTVNSGGGQSVAGQTKGTVLNGGEQYVHSGGVADGTVINTGGYQTVKAG  178
             Q+V++GG  +DT +++GGGQS+ GQ+  T LNGGEQ VH +G+A GTVIN  G Q++K+G
Sbjct  146   QRVNPGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEDGIATGTVINEKGWQAIKSG  205

Query  179   GTAANTVVNTGSEGGPDSENDDAGQWVYGTAQNTTINANGRQVVQEGGVSTDTVINSGGD  238
             + A++TVVNTG+EGGPD+EN+D+GQ VYG A  TTIN NGRQ+V   G +  TV+ +GGD
Sbjct  206   AVATDTVVNTGAEGGPDAENGDTGQTVYGDAVRTTINKNGRQIVAAEGTANTTVVYAGGD  265

Query  239   QSVHGNAENTQLDGGYQYVHSGGVADGTVINEGGYQTVKaggtatntvvntgSEGGPDAE  298
             Q+VHG+A +T L+GGYQYVH+GG A GTV+N +G Q VK G                   
Sbjct  266   QTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIVKNG-------------------  306

Query  299   NSDGQWVYGTAENTTINANGRQVINEGGVATTTTIYSGGDQSVHGYAEDTVLD--GGYQY  356
                     G A NTT+N +GR  ++ GG AT  T+  GG       A  T ++  G++  
Sbjct  307   --------GVAGNTTVNQKGRLQVDAGGTATNVTLKQGGALVTSTAATVTGINRLGAFSV  358

Query  357   VHSGGMAVNTTINSSGWQVVKEGAQARDTTVNSNGILQVNADGVASDVTINAGGALVTNT  416
             V+  G A N  ++++G+  V  G  A +T V+  G L+V  +G A+ V++  GG L++++
Sbjct  359   VE--GKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMGNGGVLLADS  416

Query  417   DADVSGTNRLG-GFSVDSVTGSASNVVLENGGQLNVFTGDSASATTV-------------  462
             +A VSGT   G +FS+++  G A  ++LE+G+ + + +GD+A+ TTV             
Sbjct  417   GAAVSGTRSDGKAFSIGG--GQADALMLEKGSSFTLNAGDTATDTTVNGGLFTARGGTLA  474

Query  463   -----DNGGTLSVAAGGTATDT-TIYAGGALIADTRSTVSGT---NAQGEFSIDGATGQA  513
                  +NG+ L++++     DT TI  G+AL+ +   T +G+   ++ G +++  +T   
Sbjct  475   GTTTLNNGAILTLSGKTVNNDTLTIREGDALLQGGSLTGNGSVEKSGSGTLTVSNTTLTQ  534

Query  514   SSLYLENGGYFSVRSGGNAADTRVGSGGELNVEDGGTLSGT-----TRLTEDATLTLTGD  568
              ++ L++G  +++  +  ++D     G  L++ ++  L+G+       L+ +AT  + ++
Sbjct  535   KAVNLNEGT-LTLNDSTVTTDVIAQRGTALKLTGSTVLNGAIDPTNVTLASGATWNIPDN  593

Query  569   AVSTGTIDS---AGTITFAQADDTGFTPHTLTTTSLVGNGGTINMSVNLNDPAFPTDMLI  625
             A   + +D    AG I F+ +    F P TL   +L G+ GTI++ V  + +   +D L+
Sbjct  594   ATVQSVVDDLSHAGQIHFTSTRTGKFVPATLKVKNLNGQNGTISLRVRPDMAQNNADRLV  653

Query  626   IDGGQAtgttnlnitntgSVGLGLATTGEGIKVVDAVNGATTDDNAFALSQPLQAGAYNY  685
             IDGG+ATG T LN+ N+G+ + G+ATTG GI+VV+A+NGATT++ AF  ++ LQAGA+NY
Sbjct  654   IDGGRATGKTILNLVNAGNSASGMATTGKGIQVVEAINGATTEEGAFVQGNKLQAGAFNY  713

Query  686   TLDHGTTDEDWYLSSEADYRAEAALYSSMLTQSMDYDRLLAGSYNQRRAAQG-GQGVWAR  744
             +L+++ +DE WYL SE  YRAE +LY+SMLTQ+MDYDR+LAGS +++ + +G  ++V+  
Sbjct  714   SLNRD-SDESWYLRSENAYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNSVRLS  772

Query  745   IQgghighddnggiaggdTPESSGSYGFIQTGADLLRSDAGPVSLTTGIYGAAGLSSVDV  804
             IQGGH+GHD+NGGIA G TPESSGSYGF++  +DLLR++ + +S+T+G+YGAAG SSVDV
Sbjct  773   IQGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSVTAGVYGAAGHSSVDV  832

Query  805   KNDDHSDAGDVRDNVYSLGGYLTMVHNASGGWVDMVAQGSRHYLEATSDNNDFNTHGWGW  864
             K+DD S AG VRD+  SLGGYL ++HNASG W D+VAQG+RH + A+SDNNDF ++GWGW
Sbjct  833   KDDDGSRAGTVRDDAGSLGGYLNLIHNASGLWADIVAQGTRHSMKASSDNNDFRARGWGW  892

Query  865   LGSLETGLPLSVGHGLVLEPQIQYIWQGLSLEDGHDNGGYVNFGDGSAQHLRAGLRFGNM  924
             LGSLETGLP+S+ + L+LEPQ+QY WQGLSL+DG DN+GYV+FG+GSAQH+RAG+R+G+ 
Sbjct  893   LGSLETGLPFSITDNLMLEPQLQYTWQGLSLDDGKDNAGYVKFGHGSAQHVRAGFRLGSH  952

Query  925   SEMAFGRGSSSQAGFGDSMKHRVSELPVNWWVRPSVIRTFSSDGDMSMGTDTAGSNVIFS  984
             ++M+FG G+SS+  + +S KH V ELPVNWWV+PSVIRTFSS GDMSMGT +AGSN+ FS
Sbjct  953   NDMTFGEGTSSRDTLRGSAKHSVRELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFS  1012

Query  985   PSQDGTSLD  993
             PSQ+GTSLD
Sbjct  1013  PSQNGTSLD  1021