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PAthogenisity Island DataBase (PAI DB)

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Homologs of APECO1_3501 gene of NC_008563_P4

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) c5210
( NP_757058.1 )

hypothetical protein

NC_004431
(Escherichia coli CFT073)

2e-98

100

2) ECS88_3289
( YP_002392902.1 )

hypothetical protein

NC_011742
(Escherichia coli S88)

2e-98

100

3) APECO1_3501
( YP_854310.1 )

hypothetical protein

NC_008563
(Escherichia coli APEC O1)

4e-98

100

4) EC042_3184
( YP_006097477.1 )

hypothetical protein

NC_017626
(Escherichia coli 042)

3e-91

• Sequence Alignments

1) c5210 in NC_004431


> NC_008563_P4|35|G34|117625227|YP_854310.1|Escherichia_coli_APEC_O1|-|34336..34980|-|APECO1_3501|hypothetical 
protein
Length=214

 Score =  351 bits (1317),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 214/214 (100%), Positives = 214/214 (100%), Gaps = 0/214 (0%)

Query  4    MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR  63
            MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR
Sbjct  1    MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR  60

Query  64   IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY  123
            IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY
Sbjct  61   IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY  120

Query  124  ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE  183
            ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE
Sbjct  121  ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE  180

Query  184  HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY  217
            HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY
Sbjct  181  HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY  214

2) ECS88_3289 in NC_011742


> NC_008563_P4|35|G34|117625227|YP_854310.1|Escherichia_coli_APEC_O1|-|34336..34980|-|APECO1_3501|hypothetical 
protein
Length=214

 Score =  351 bits (1317),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 214/214 (100%), Positives = 214/214 (100%), Gaps = 0/214 (0%)

Query  4    MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR  63
            MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR
Sbjct  1    MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR  60

Query  64   IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY  123
            IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY
Sbjct  61   IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY  120

Query  124  ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE  183
            ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE
Sbjct  121  ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE  180

Query  184  HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY  217
            HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY
Sbjct  181  HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY  214

3) APECO1_3501 in NC_008563


> NC_008563_P4|35|G34|117625227|YP_854310.1|Escherichia_coli_APEC_O1|-|34336..34980|-|APECO1_3501|hypothetical 
protein
Length=214

 Score =  350 bits (1315),  Expect = 4e-98, Method: Compositional matrix adjust.
 Identities = 214/214 (100%), Positives = 214/214 (100%), Gaps = 0/214 (0%)

Query  1    MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR  60
            MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR
Sbjct  1    MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR  60

Query  61   IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY  120
            IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY
Sbjct  61   IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY  120

Query  121  ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE  180
            ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE
Sbjct  121  ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE  180

Query  181  HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY  214
            HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY
Sbjct  181  HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY  214

4) EC042_3184 in NC_017626


> NC_008563_P4|35|G34|117625227|YP_854310.1|Escherichia_coli_APEC_O1|-|34336..34980|-|APECO1_3501|hypothetical 
protein
Length=214

 Score =  327 bits (1228),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 197/214 (93%), Positives = 206/214 (97%), Gaps = 0/214 (0%)

Query  1    MNGKYNVRSELLARCIGTGRLKGDVRSDFIGFNGSKQVGYVLLTLFLTKVTNSDLLSHYR  60
            MNGKYNVRSELLARCIGTGRLKGDV SDFIGFNGSKQ+GYVLLTLFL KV N+DLLSHYR
Sbjct  1    MNGKYNVRSELLARCIGTGRLKGDVVSDFIGFNGSKQIGYVLLTLFLIKVINPDLLSHYR  60

Query  61   IFNLFLHYERKVMDIYNSLSDIEVDCICQEVMAIYEHTQRCCNEKKITTIQLGRKLNGRY  120
            IFN FL+YERKVMDIYNSLSDIEVDCIC+EVMAIYEHTQRCCNEKKITT+QLGRKLNGRY
Sbjct  61   IFNRFLRYERKVMDIYNSLSDIEVDCICREVMAIYEHTQRCCNEKKITTVQLGRKLNGRY  120

Query  121  ADTIAELKETAEIRGEDVISFEMDILNSFNDADEYHGRVKLELDIPASDILYCHDFIDSK  180
            AD IAELKETAE+RGE+VISFEMDILNSFNDA+EYHGRVKLELDIPASDILYCHDFIDS 
Sbjct  121  ADMIAELKETAEMRGEGVISFEMDILNSFNDANEYHGRVKLELDIPASDILYCHDFIDSE  180

Query  181  HVNSWLVEPHEWVVINRSLNGIVTVPVSSIKILY  214
            HVNSWLVEPHEWVVINRSL GIVTVPVS+IKI Y
Sbjct  181  HVNSWLVEPHEWVVINRSLTGIVTVPVSAIKISY  214