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PAthogenisity Island DataBase (PAI DB)

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Homologs of api32 gene of AJ627388

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) YE3489
( YP_001007648.1 )

hypothetical protein

NC_008800
(Yersinia enterocolitica 8081)

6e-27

2) YpsIP31758_3712
( YP_001402666.1 )

hypothetical protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

2e-16

100

3) ECL_00437
( YP_003610952.1 )

hypothetical protein

NC_014121
(Enterobacter cloacae ATCC 13047)

2e-13

4) SPAB_05379
( YP_001591485.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

7e-12

5) Ser39006_1501
( YP_008521883.1 )

integrating conjugative element protein, PFL_4701 family

NC_022268
(Serratia sp. ATCC 39006)

1e-08

6) EPYR_03277
( YP_005804028.1 )

hypothetical protein

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-05

7) EPYR_03455
( YP_005804206.1 )

hypothetical protein

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-05

8) EpC_30380
( YP_002650019.1 )

hypothetical protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-05

9) EpC_32000
( YP_002650181.1 )

hypothetical protein

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-05

10) EJP617_06550
( YP_005817223.1 )

hypothetical protein

NC_017445
(Erwinia sp. Ejp617)

1e-05

11) PAGR_g3852
( YP_005994560.1 )

hypothetical protein

NC_017554
(Pantoea ananatis PA13)

0.001

12) PANA5342_3982
( YP_005197412.1 )

hypothetical protein

NC_016816
(Pantoea ananatis LMG 5342)

0.002

13) PMI2584
( YP_002152303.1 )

hypothetical protein

NC_010554
(Proteus mirabilis HI4320)

3.4

• Sequence Alignments

1) YE3489 in NC_008800


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 68/70 (98%), Positives = 70/70 (100%), Gaps = 0/70 (0%)

Query  2   MPMTGTQQSAWNAGVGGGMEPSSLNFLILGLLAGVIFLFSAWTLVTAYRGVINKSLAMDK  61
           MPMTG+QQSAWNAGVGGGMEPSSLNFLILGLL+GVIFLFSAWTLVTAYRGVINKSLAMDK
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  62  LPETAIRLIC  71
           LPETAIRLIC
Sbjct  61  LPETAIRLIC  70

2) YpsIP31758_3712 in NC_009708


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 78.4 bits (278),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 70/70 (100%), Positives = 70/70 (100%), Gaps = 0/70 (0%)

Query  1   MPMTGAQQSAWNAGVGGGMEPsslnflilgllggviflfsAWTLVTAYRGVINKSLAMDK  60
           MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  LPETAIRLIC  70
           LPETAIRLIC
Sbjct  61  LPETAIRLIC  70

3) ECL_00437 in NC_014121


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 68.7 bits (241),  Expect = 2e-13, Method: Compositional matrix adjust.
 Identities = 39/69 (57%), Positives = 55/69 (80%), Gaps = 0/69 (0%)

Query  1   MAMNGAQLNGWSAGTGSSLTPSQLNTLILGTLAVVILLFSAWALVQAYRGVASKSVTFRQ  60
           M+M GAQ ++W+AG G+++ PS LN LILG L+ VI+LFSAW+LV AYRGV +KS++  +
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  FNELAVRLI  69
           + E A+RLI
Sbjct  61  LPETAIRLI  69

4) SPAB_05379 in NC_010102


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 63.4 bits (221),  Expect = 7e-12, Method: Compositional matrix adjust.
 Identities = 31/63 (50%), Positives = 52/63 (83%), Gaps = 0/63 (0%)

Query  1   MAMNGSQLNGWSAGTGSSLTPGQLNLLILGTLAIVVLLFSAWALVQAYRGLVSKSVTFRQ  60
           M+M G+Q ++W+AG G+++ P+ LN+LILG L+ V++LFSAW+LV AYRG+++KS++  +
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  FNE  63
           + E
Sbjct  61  LPE  63

5) Ser39006_1501 in NC_022268


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 52.4 bits (179),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 51/67 (77%), Positives = 62/67 (93%), Gaps = 0/67 (0%)

Query  1   MAMTSAQQSGWSAGTGGGMEPASlnllilgllgavlflfvawvlvTAYRGVSDKSIPMSK  60
           M+MT+AQQS+W+AG GGGMEP+SLN+LILGLLG+V+FLF AW LVTAYRGV +KS++M K
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  LPETAIR  67
           LPETAIR
Sbjct  61  LPETAIR  67

6) EJP617_06550 in NC_017445


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 42.9 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 29/63 (47%), Positives = 50/63 (80%), Gaps = 0/63 (0%)

Query  1   MAMNAAQLSGWSAGTGSSLTPAQLNTlilgslaivlllFAAWAMVQAYRGLASKAVTFRQ  60
           M+M +AQ S+W+AG G+++ P+ LN LILG L+ V++LF+AW++V AYRG+ +K+++  +
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  FNE  63
           + E
Sbjct  61  LPE  63

7) EPYR_03277 in NC_017390


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 42.9 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 29/63 (47%), Positives = 50/63 (80%), Gaps = 0/63 (0%)

Query  1   MAMNAAQLSGWSAGTGSSLTPAQLNTlilgslaivlllFAAWAMVQAYRGLASKAVTFRQ  60
           M+M +AQ S+W+AG G+++ P+ LN LILG L+ V++LF+AW++V AYRG+ +K+++  +
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  FNE  63
           + E
Sbjct  61  LPE  63

8) EPYR_03455 in NC_017390


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 42.9 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 29/63 (47%), Positives = 50/63 (80%), Gaps = 0/63 (0%)

Query  1   MAMNAAQLSGWSAGTGSSLTPAQLNTlilgslaivlllFAAWAMVQAYRGLASKAVTFRQ  60
           M+M +AQ S+W+AG G+++ P+ LN LILG L+ V++LF+AW++V AYRG+ +K+++  +
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  FNE  63
           + E
Sbjct  61  LPE  63

9) EpC_30380 in NC_012214


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 42.9 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 29/63 (47%), Positives = 50/63 (80%), Gaps = 0/63 (0%)

Query  1   MAMNAAQLSGWSAGTGSSLTPAQLNTlilgslaivlllFAAWAMVQAYRGLASKAVTFRQ  60
           M+M +AQ S+W+AG G+++ P+ LN LILG L+ V++LF+AW++V AYRG+ +K+++  +
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  FNE  63
           + E
Sbjct  61  LPE  63

10) EpC_32000 in NC_012214


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 42.9 bits (143),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 29/63 (47%), Positives = 50/63 (80%), Gaps = 0/63 (0%)

Query  1   MAMNAAQLSGWSAGTGSSLTPAQLNTlilgslaivlllFAAWAMVQAYRGLASKAVTFRQ  60
           M+M +AQ S+W+AG G+++ P+ LN LILG L+ V++LF+AW++V AYRG+ +K+++  +
Sbjct  1   MPMTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDK  60

Query  61  FNE  63
           + E
Sbjct  61  LPE  63

11) PAGR_g3852 in NC_017554


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 36.1 bits (117),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 34/62 (55%), Positives = 49/62 (80%), Gaps = 0/62 (0%)

Query  1   MNGAQTSGWAAGTGGSLTPsqlnililsalaivillfsaWALVQAYRGLASKTVTFRQFT  60
           M GAQ S+W AG GG++ PS LN+LIL+ L+ VI+LFSAW+LV AYRG+ +K+++  ++ 
Sbjct  3   MTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDKLP  62

Query  61  ET  62
           ET
Sbjct  63  ET  64

12) PANA5342_3982 in NC_016816


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 35.1 bits (113),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 34/62 (55%), Positives = 49/62 (80%), Gaps = 0/62 (0%)

Query  1   MNGAQTSGWAAGSGGSLTPsqlnililsalaivillfsaWALVMAYRGLASKTVTFRQFT  60
           M GAQ S+W AG GG++ PS LN+LIL+ L+ VI+LFSAW+LV AYRG+ +K+++  ++ 
Sbjct  3   MTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDKLP  62

Query  61  ET  62
           ET
Sbjct  63  ET  64

13) PMI2584 in NC_010554


> AJ627388|35|G34|49658880|CAF28506.1|Yersinia_pseudotuberculosis_32777|+|30623..30868|api32|-|putative 
transmembrane protein
Length=81

 Score = 24.5 bits (73),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 27/67 (41%), Positives = 45/67 (68%), Gaps = 0/67 (0%)

Query  1   MNPSQQAAFEAAAGSGMSPAVLNLLCIgallavlflwaawglvDVYRGWANENVRTARVG  60
           M  +QQ+A +A+ G+GM P+ LN+L +G L +V+FL +AW LV  YRG  N ++   ++ 
Sbjct  3   MTGAQQSAWNAGVGGGMEPSSLNFLILGLLGGVIFLFSAWTLVTAYRGVINKSLAMDKLP  62

Query  61  QFAVRAV  67
           + A+R +
Sbjct  63  ETAIRLI  69