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Homologs of cap1N gene of U10927

545

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SSP0070
( YP_300160.1 )

capsular polysaccharide synthesis protein

NC_007350
(Staphylococcus saprophyticus ATCC 15305)

9e-68

2) SLGD_00335
( YP_003470610.1 )

capsular polysaccharide synthesis enzyme Cap8M

NC_013893
(Staphylococcus lugdunensis HKU09-01)

3e-65

3) capM
( YP_005759456.1 )

capsular polysaccharide synthesis enzyme

NC_017353
(Staphylococcus lugdunensis N920143)

3e-65

4) SAMSHR1132_01350
( YP_005324657.1 )

capsular polysaccharide synthesis enzyme

NC_016941
(Staphylococcus aureus MSHR1132)

2e-64

5) capM
( YP_002635432.1 )

capsular polysaccharide synthesis enzyme Cap5M

NC_012121
(Staphylococcus carnosus TM300)

8e-64

6) SAS0136
( YP_042258.1 )

capsular polysaccharide synthesis enzyme

NC_002953
(Staphylococcus aureus MSSA476)

3e-63

7) cap8M
( NP_644951.1 )

capsular polysaccharide synthesis enzyme Cap8M

NC_003923
(Staphylococcus aureus MW2)

3e-63

8) capM1
( YP_008484182.1 )

capsular polysaccharide synthesis galactosyltransferase CapM

NC_022222
(Staphylococcus aureus 6850)

5e-63

9) capM
( YP_005754145.1 )

capsular polysaccharide synthesis enzyme

NC_017349
(Staphylococcus aureus LGA251)

5e-63

10) M013TW_0151
( YP_005296619.1 )

capsular polysaccharide synthesis enzyme Cap5M

NC_016928
(Staphylococcus aureus M013)

5e-63

11) capM
( YP_008586775.1 )

capsular polysaccharide synthesis enzyme

NC_022443
(Staphylococcus aureus SA40)

5e-63

12) capM
( YP_008584241.1 )

capsular polysaccharide synthesis enzyme

NC_022442
(Staphylococcus aureus SA957)

5e-63

13) capM
( YP_005740911.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_017340
(Staphylococcus aureus 04-02981)

9e-63

14) capM
( YP_006708912.1 )

capsular polysaccharide synthesis enzyme

NC_018608
(Staphylococcus aureus 08BA02176)

9e-63

15) MS7_0155
( YP_005756620.1 )

bacterial sugar transferase family protein

NC_017351
(Staphylococcus aureus 11819-97)

9e-63

16) SAAG_00644
( YP_008448157.1 )

sugar transferase

NC_022113
(Staphylococcus aureus 55/2053)

9e-63

17) ST398NM01_0175
( YP_006194322.1 )

Undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase

NC_017673
(Staphylococcus aureus 71193)

9e-63

18) SABB_01680
( YP_008167324.1 )

sugar transferase EpsL

NC_021670
(Staphylococcus aureus Bmb9393)

9e-63

19) CA347_173
( YP_008127056.1 )

bacterial sugar transferase family protein

NC_021554
(Staphylococcus aureus CA-347)

9e-63

20) SAKOR_00141
( YP_008490325.1 )

Undecaprenyl-phosphate beta-N-acetyl-D-fucosaminephosphotransferase

NC_022226
(Staphylococcus aureus CN1)

9e-63

21) cap5M
( YP_185048.1 )

capsular polysaccharide biosynthesis galactosyltransferase Cap5M

NC_002951
(Staphylococcus aureus COL)

9e-63

22) ECTR2_118
( YP_005748871.1 )

glucosyltransferase EpsB domain protein

NC_017343
(Staphylococcus aureus ECT-R 2)

9e-63

23) SAOV_0108
( YP_005735626.1 )

capsular polysaccharide biosynthesis galactosyltransferase CapM

NC_017337
(Staphylococcus aureus ED133)

9e-63

24) cap5M
( YP_003281082.1 )

capsular polysaccharide biosynthesis galactosyltransferase Cap5M

NC_013450
(Staphylococcus aureus ED98)

9e-63

25) cap5M
( YP_492878.1 )

capsular polysaccharide biosynthesis protein Cap5M

NC_007793
(Staphylococcus aureus FPR3757)

9e-63

26) capM
( YP_006236501.1 )

capsular polysaccharide synthesis enzyme

NC_017763
(Staphylococcus aureus HO 5096 0412)

9e-63

27) SaurJH1_0152
( YP_001315301.1 )

sugar transferase

NC_009632
(Staphylococcus aureus JH1)

9e-63

28) SaurJH9_0147
( YP_001245530.1 )

sugar transferase

NC_009487
(Staphylococcus aureus JH9)

9e-63

29) cap5M
( YP_005743533.1 )

capsular polysaccharide biosynthesis galactosyltransferase Cap5M

NC_017341
(Staphylococcus aureus JKD6008)

9e-63

30) cap5M
( YP_005738311.1 )

capsular polysaccharide biosynthesis galactosyltransferase Cap5M

NC_017338
(Staphylococcus aureus JKD6159)

9e-63

31) BN843_1670
( YP_007867246.1 )

capsular polysaccharide synthesis enzyme Cap8M

NC_021059
(Staphylococcus aureus M1)

9e-63

32) capM
( YP_039628.1 )

capsular polysaccharide synthesis enzyme

NC_002952
(Staphylococcus aureus MRSA252)

9e-63

33) capM
( YP_001440750.1 )

capsular polysaccharide synthesis enzyme Cap5M

NC_009782
(Staphylococcus aureus Mu3)

9e-63

34) capM
( NP_370685.1 )

capsular polysaccharide synthesis enzyme Cap5M

NC_002758
(Staphylococcus aureus Mu50)

9e-63

35) capM
( NP_373398.1 )

capsular polysaccharide synthesis protein Cap5M

NC_002745
(Staphylococcus aureus N315)

9e-63

36) SAOUHSC_00126
( YP_498726.1 )

capsular polysaccharide biosynthesis protein Cap8M

NC_007795
(Staphylococcus aureus NCTC 8325)

9e-63

37) capM
( YP_001331142.1 )

capsular polysaccharide biosynthesis protein CapM

NC_009641
(Staphylococcus aureus Newman)

9e-63

38) capM
( YP_415615.1 )

capsular polysaccharide synthesis enzyme CapM

NC_007622
(Staphylococcus aureus RF122)

9e-63

39) capM
( YP_007582726.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_020536
(Staphylococcus aureus ST228)

9e-63

40) capM
( YP_007620440.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_020566
(Staphylococcus aureus ST228)

9e-63

41) capM
( YP_007622427.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_020568
(Staphylococcus aureus ST228)

9e-63

42) capM
( YP_007576739.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

9e-63

43) capM
( YP_007618454.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

9e-63

44) capM
( YP_007578747.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

9e-63

45) capM
( YP_007580711.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

9e-63

46) capM
( YP_007584690.1 )

Capsular polysaccharide synthesis enzyme Cap5M

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

9e-63

47) SAPIG0175
( YP_005732985.1 )

glucosyltransferase EpsB

NC_017333
(Staphylococcus aureus ST398)

9e-63

48) pbpC
( YP_005751438.1 )

Capsular polysaccharide synthesis enzyme

NC_017347
(Staphylococcus aureus T0131)

9e-63

49) cap5M
( YP_001574086.1 )

capsular polysaccharide biosynthesis protein Cap5M

NC_010079
(Staphylococcus aureus TCH1516)

9e-63

50) cap5M
( YP_005746419.1 )

capsular polysaccharide biosynthesis galactosyltransferase Cap5M

NC_017342
(Staphylococcus aureus TCH60)

9e-63

51) capM
( YP_005730194.1 )

capsular polysaccharide synthesis enzyme

NC_017331
(Staphylococcus aureus TW20)

9e-63

52) SAVC_00575
( YP_005289716.1 )

capsular polysaccharide biosynthesis galactosyltransferase Cap5M

NC_016912
(Staphylococcus aureus VC40)

9e-63

53) MCCL_0678
( YP_002560081.1 )

capsular polysaccharide synthesis protein CapM

NC_011999
(Macrococcus caseolyticus JCSC5402)

1e-55

54) Clocl_4198
( YP_005048549.1 )

glycosyl transferase

NC_016627
(Clostridium clariflavum DSM 19732)

3e-42

55) Ppro_3388
( YP_903038.1 )

sugar transferase

NC_008609
(Pelobacter propionicus DSM 2379)

9e-41

56) Ppha_0569
( YP_002017498.1 )

sugar transferase

NC_011060
(Pelodictyon phaeoclathratiforme BU-1)

2e-39

57) M7W_1030
( YP_007393723.1 )

Undecaprenyl-phosphate galactosephosphotransferase

NC_020207
(Enterococcus faecium NRRL B-2354)

2e-39

58) RTCIAT899_CH18225
( YP_007335553.1 )

sugar transferase

NC_020059
(Rhizobium tropici CIAT 899)

2e-39

59) Plim_0633
( YP_003628679.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014148
(Planctomyces limnophilus DSM 3776)

5e-39

60) SSA_2220
( YP_001036135.1 )

galactosyltransferase

NC_009009
(Streptococcus sanguinis SK36)

7e-39

61) Gbem_1626
( YP_002138440.1 )

glycosyltransferase

NC_011146
(Geobacter bemidjiensis Bem)

1e-38

62) SGO_2023
( YP_001451271.1 )

galactosyltransferase

NC_009785
(Streptococcus gordonii Challis)

1e-38

63) PHZ_c1136
( YP_002129979.1 )

sugar transferase

NC_011144
(Phenylobacterium zucineum HLK1)

9e-39

64) Cpha266_2615
( YP_913026.1 )

sugar transferase

NC_008639
(Chlorobium phaeobacteroides DSM 266)

2e-38

65) CYCME_0462
( YP_008373162.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021917
(Cycloclasticus zancles 7-ME)

5e-38

66) FPR_28840
( YP_007801372.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021020
(Faecalibacterium prausnitzii SL3/3)

1e-37

67) ELI_2701
( YP_003960645.1 )

hypothetical protein

NC_014624
(Eubacterium limosum KIST612)

7e-38

68) GM21_2587
( YP_003022385.1 )

sugar transferase

NC_012918
(Geobacter sp. M21)

2e-37

69) BH3716
( NP_244583.1 )

galactosyltransferase

NC_002570
(Bacillus halodurans C-125)

2e-37

70) Daro_1277
( YP_284499.1 )

sugar transferase

NC_007298
(Dechloromonas aromatica RCB)

3e-37

71) ELI_1967
( YP_003959913.1 )

hypothetical protein

NC_014624
(Eubacterium limosum KIST612)

3e-37

72) SP70585_0417
( YP_002739717.1 )

capsular polysaccharide biosynthesis protein Cps4E

NC_012468
(Streptococcus pneumoniae 70585)

3e-37

73) SUB1038
( YP_002562362.1 )

glycosyl-1-phosphate-transferase

NC_012004
(Streptococcus uberis 0140J)

7e-37

74) Fisuc_2686
( YP_003250751.1 )

sugar transferase

NC_013410
(Fibrobacter succinogenes S85)

1e-36

75) FSU_3254
( YP_005822997.1 )

lipopolysaccharide synthesis sugar transferase

NC_017448
(Fibrobacter succinogenes S85)

1e-36

76) HEAR1150
( YP_001099456.1 )

sugar-1-phosphate transferase (partial before start's modification)

NC_009138
(Herminiimonas arsenicoxydans )

2e-36

77) TEH_03940
( YP_004885885.1 )

putative polyprenyl-phosphate--hexose-phosphate transferase

NC_016052
(Tetragenococcus halophilus NBRC 12172)

2e-36

78) Despr_3184
( YP_004196603.1 )

sugar transferase

NC_014972
(Desulfobulbus propionicus DSM 2032)

2e-36

79) K710_0837
( YP_008056551.1 )

CpsF

NC_021314
(Streptococcus iniae SF1)

3e-36

80) capM
( NP_968575.1 )

capsular polysaccharide synthesis enzyme Cap8M

NC_005363
(Bdellovibrio bacteriovorus HD100)

4e-36

81) Thexy_1808
( YP_004471500.1 )

sugar transferase

NC_015555
(Thermoanaerobacterium xylanolyticum LX-11)

5e-36

82) SpiBuddy_0254
( YP_004246287.1 )

sugar transferase

NC_015152
(Sphaerochaeta globosa Buddy)

3e-35

83) SII_1749
( YP_008497887.1 )

putative galactosyltransferase

NC_022237
(Streptococcus intermedius C270)

3e-35

84) SCIM_1577
( YP_006470477.1 )

galactosyltransferase

NC_018073
(Streptococcus intermedius JTH08)

3e-35

85) FP2_19210
( YP_007837618.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021042
(Faecalibacterium prausnitzii L2/6)

5e-35

86) Hsero_4221
( YP_003777598.1 )

galactosyltransferase

NC_014323
(Herbaspirillum seropedicae SmR1)

6e-35

87) wcaJ
( YP_004038531.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014733
(Methylovorus sp. MP688)

1e-34

88) GM18_1461
( YP_004198205.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014973
(Geobacter sp. M18)

1e-34

89) BcerKBAB4_5069
( YP_001647843.1 )

sugar transferase

NC_010184
(Bacillus weihenstephanensis KBAB4)

1e-34

90) Gmet_1337
( YP_006720304.1 )

undecaprenyl-phosphate glycosylphosphotransferase

NC_007517
(Geobacter metallireducens GS-15)

9e-35

91) Bsel_3047
( YP_003701094.1 )

sugar transferase

NC_014219
(Bacillus selenitireducens MLS10)

2e-34

92) N134_05845
( YP_008326457.1 )

UDP-phosphate galactose phosphotransferase

NC_021872
(Lactobacillus reuteri TD1)

3e-34

93) Amet_0201
( YP_001318095.1 )

sugar transferase

NC_009633
(Alkaliphilus metalliredigens QYMF)

3e-34

94) MPD5_1390
( YP_005320092.1 )

undecaprenyl-phosphategalactose phosphotransferase

NC_016938
(Melissococcus plutonius DAT561)

5e-34

95) Sama_2247
( YP_928122.1 )

capsular polysaccharide synthesis protein

NC_008700
(Shewanella amazonensis SB2B)

6e-34

96) Apre_1493
( YP_003153235.1 )

sugar transferase

NC_013171
(Anaerococcus prevotii DSM 20548)

9e-34

97) Sala_1586
( YP_616632.1 )

sugar transferase

NC_008048
(Sphingopyxis alaskensis RB2256)

1e-33

98) MPTP_0528
( YP_004455812.1 )

UDP-phosphate galactose phosphotransferase

NC_015516
(Melissococcus plutonius ATCC 35311)

2e-33

99) Q91_1974
( YP_006838510.1 )

Galactosyltransferase protein

NC_018697
(Cycloclasticus sp. P1; MCCC 1A01040)

2e-33

100) Cphamn1_0384
( YP_001958831.1 )

sugar transferase

NC_010831
(Chlorobium phaeobacteroides BS1)

2e-33

101) lpsB1
( YP_001984980.1 )

galactosyltransferase

NC_010997
(Rhizobium etli CIAT 652)

2e-33

102) Exig_2633
( YP_001815098.1 )

sugar transferase

NC_010556
(Exiguobacterium sibiricum 255-15)

3e-33

103) HDN1F_10490
( YP_003810289.1 )

sugar transferase

NC_014366
(gamma proteobacterium HdN1)

3e-33

104) Varpa_4678
( YP_004156952.1 )

sugar transferase

NC_014931
(Variovorax paradoxus EPS)

4e-33

105) Dtox_4101
( YP_003193396.1 )

sugar transferase

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

4e-33

106) Cphy_3507
( YP_001560595.1 )

sugar transferase

NC_010001
(Clostridium phytofermentans ISDg)

4e-33

107) Rleg2_6496
( YP_002284249.1 )

sugar transferase

NC_011371
(Rhizobium leguminosarum WSM2304)

4e-33

108) ELI_4561
( YP_003962458.1 )

hypothetical protein

NC_014624
(Eubacterium limosum KIST612)

6e-33

109) wcaJ
( YP_001353945.1 )

lipopolysaccharide synthesis sugar transferase

NC_009659
(Janthinobacterium sp. Marseille)

1e-32

110) Awo_c21060
( YP_005269771.1 )

putative sugar transferase

NC_016894
(Acetobacterium woodii DSM 1030)

1e-32

111) Rfer_1263
( YP_522528.1 )

sugar transferase

NC_007908
(Rhodoferax ferrireducens T118)

1e-32

112) Exig_2567
( YP_001815033.1 )

sugar transferase

NC_010556
(Exiguobacterium sibiricum 255-15)

1e-32

113) cps2E
( YP_006082899.1 )

galactosyl transferase

NC_017621
(Streptococcus suis D12)

9e-33

114) EAT1b_1192
( YP_002885565.1 )

sugar transferase

NC_012673
(Exiguobacterium sp. AT1b)

9e-33

115) Btus_0882
( YP_003588770.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014098
(Kyrpidia tusciae DSM 2912)

9e-33

116) WKK_06375
( YP_004726824.1 )

exopolysaccharide phosphogalactosyltransferase

NC_015759
(Weissella koreensis KACC 15510)

3e-32

117) CAP2UW1_0117
( YP_003165406.1 )

sugar transferase

NC_013194
(Candidatus Accumulibacter phosphatis UW-1)

4e-32

118) zj316_2p03
( YP_008362767.1 )

Galactosyl transferase

NC_021904
(Lactobacillus plantarum ZJ316)

6e-32

119) Rmag_0887
( YP_904073.1 )

sugar transferase

NC_008610
(Candidatus Ruthia magnifica Cm)

7e-32

120) M301_1255
( YP_003674215.1 )

sugar transferase

NC_014207
(Methylotenera versatilis 301)

1e-31

121) Dsui_0054
( YP_005026320.1 )

glycosyl transferase family protein

NC_016616
(Dechlorosoma suillum PS)

9e-32

122) BCN_5199
( YP_005107732.1 )

galactosyltransferase

NC_016771
(Bacillus cereus NC7401)

1e-31

123) rfbP
( YP_006993798.2 )

bacterial sugar transferase family protein

NC_019425
(Carnobacterium maltaromaticum LMA28)

1e-31

124) Pnap_3481
( YP_983699.1 )

sugar transferase

NC_008781
(Polaromonas naphthalenivorans CJ2)

2e-31

125) Eab7_2407
( YP_006792109.1 )

sugar transferase

NC_018665
(Exiguobacterium antarcticum Eab7)

2e-31

126) AXY_20080
( YP_006845902.1 )

polyprenyl-phosphate--hexose-phosphate transferase

NC_018704
(Amphibacillus xylanus NBRC 15112)

2e-31

127) wbtP
( YP_899051.1 )

galactosyl transferase

NC_008601
(Francisella novicida U112)

2e-31

128) Mmol_1038
( YP_003048474.1 )

sugar transferase

NC_012968
(Methylotenera mobilis JLW8)

4e-31

129) Caul_1752
( YP_001683379.1 )

sugar transferase

NC_010338
(Caulobacter sp. K31)

1e-30

130) ROI_04930
( YP_007830824.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021040
(Roseburia intestinalis M50/1)

7e-31

131) RO1_35310
( YP_007779579.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021012
(Roseburia intestinalis XB6B4)

7e-31

132) Rleg_6006
( YP_002978518.1 )

sugar transferase

NC_012852
(Rhizobium leguminosarum WSM1325)

7e-31

133) Msip34_0096
( YP_003049872.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_012969
(Methylovorus glucosetrophus SIP3-4)

8e-31

134) GWCH70_3256
( YP_002951166.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_012793
(Geobacillus sp. WCH70)

1e-30

135) Gura_1698
( YP_001230466.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_009483
(Geobacter uraniireducens Rf4)

1e-30

136) SAR116_1964
( YP_003552291.1 )

sugar transferase

NC_014010
(Candidatus Puniceispirillum marinum IMCC1322)

2e-30

137) epsL
( YP_007494404.1 )

Uncharacterized sugar transferase epsL

NC_020409
(Desulfovibrio piezophilus C1TLV30)

2e-30

138) GC56T3_3296
( YP_003672787.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014206
(Geobacillus sp. C56-T3)

2e-30

139) SP_0350
( NP_344883.1 )

capsular polysaccharide biosynthesis protein Cps4E

NC_003028
(Streptococcus pneumoniae TIGR4)

4e-30

140) CLJU_c05410
( YP_003778725.1 )

glycosyltransferase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

5e-30

141) LAF_0088
( YP_001842904.1 )

capsular polysaccharide synthesis protein

NC_010610
(Lactobacillus fermentum IFO 3956)

6e-30

142) Fphi_1244
( YP_001677970.1 )

galactosyl transferase

NC_010336
(Francisella philomiragia ATCC 25017)

7e-30

143) zobellia_3758
( YP_004738175.1 )

exopolysaccharide production protein

NC_015844
(Zobellia galactanivorans DsiJT)

8e-30

144) lpsB1
( YP_471772.1 )

galactosyltransferase

NC_007763
(Rhizobium etli CFN 42)

1e-29

145) REMIM1_PA00001
( YP_008366882.1 )

sugar transferase family protein

NC_021906
(Rhizobium etli Mim1)

1e-29

146) wcaJ
( YP_088684.1 )

WcaJ protein

NC_006300
(Mannheimia succiniciproducens MBEL55E)

1e-29

147) BCE_5393
( NP_981685.1 )

UDP-galactose phosphate transferase

NC_003909
(Bacillus cereus ATCC 10987)

1e-29

148) Ethha_1109
( YP_004091393.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014828
(Ethanoligenens harbinense YUAN-3)

1e-29

149) BpOF4_06575
( YP_003426265.1 )

UDP-galactose phosphate transferase

NC_013791
(Bacillus pseudofirmus OF4)

1e-29

150) CCC13826_0450
( YP_001467292.1 )

Cpp29

NC_009802
(Campylobacter concisus 13826)

1e-29

151) Asuc_0102
( YP_001343417.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_009655
(Actinobacillus succinogenes 130Z)

2e-29

152) BCK_09010
( YP_006595911.1 )

UDP-galactose phosphate transferase

NC_018491
(Bacillus cereus FRI-35)

2e-29

153) HMPREF9243_0861
( YP_004321159.1 )

sugar transferase

NC_015278
(Aerococcus urinae ACS-120-V-Col10a)

3e-29

154) LRC_00920
( YP_004831361.1 )

glycosyltransferase

NC_015975
(Lactobacillus ruminis ATCC 27782)

4e-29

155) C270_02655
( YP_006795443.1 )

capsular polysaccharide synthesis protein

NC_018673
(Leuconostoc carnosum JB16)

4e-29

156) CLJU_c05210
( YP_003778705.1 )

glycosyltransferase

NC_014328
(Clostridium ljungdahlii ATCC 49587)

4e-29

157) OOM_0811
( YP_006316748.1 )

acyltransferase

NC_017909
(Francisella noatunensis Toba 04)

1e-28

158) Aeqsu_2910
( YP_006419366.1 )

glycosyl transferase

NC_018013
(Aequorivita sublithincola DSM 14238)

1e-28

159) rfbP
( NP_561530.1 )

undecaprenyl phosphate galactosephosphotransferase

NC_003366
(Clostridium perfringens 13)

1e-28

160) CPF_0595
( YP_695048.1 )

sugar transferase

NC_008261
(Clostridium perfringens ATCC 13124)

1e-28

161) CA_C3073
( NP_349673.1 )

sugar transferase

NC_003030
(Clostridium acetobutylicum ATCC 824)

1e-28

162) cpsE
( YP_004637727.1 )

lipopolysaccharide synthesis sugar transferase

NC_015687
(Clostridium acetobutylicum DSM 1731)

1e-28

163) CEA_G3079
( YP_005672211.1 )

sugar transferase

NC_017295
(Clostridium acetobutylicum EA 2018)

1e-28

164) Glo7428_4387
( YP_007129990.1 )

Undecaprenyl-phosphate galactose phosphotransferase

NC_019745
(Gloeocapsa sp. PCC 7428)

7e-29

165) CFF8240_1381
( YP_892522.1 )

general glycosylation pathway protein

NC_008599
(Campylobacter fetus 82-40)

9e-29

166) Cseg_1547
( YP_003592653.1 )

sugar transferase

NC_014100
(Caulobacter segnis ATCC 21756)

1e-28

167) Bpro_3985
( YP_550777.1 )

sugar transferase

NC_007948
(Polaromonas sp. JS666)

2e-28

168) FB2170_09936
( YP_003862864.1 )

putative undecaprenyl-phosphate glycosyl-1-phosphate transferase

NC_014472
(Maribacter sp. HTCC2170)

2e-28

169) SIR_1781
( YP_008513683.1 )

putative UDP-galactose phosphate transferase

NC_022246
(Streptococcus intermedius B196)

3e-28

170) Niako_5338
( YP_005010978.1 )

sugar transferase

NC_016609
(Niastella koreensis GR20-10)

3e-28

171) Weevi_0952
( YP_004238240.1 )

sugar transferase

NC_015144
(Weeksella virosa DSM 16922)

5e-28

172) RoseRS_2370
( YP_001276698.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_009523
(Roseiflexus sp. RS-1)

1e-27

173) M635_01325
( YP_008293210.1 )

UDP-galactose phosphate transferase

NC_021834
(Campylobacter jejuni 32488)

5e-28

174) pglC
( YP_005656422.1 )

galactosyltransferase

NC_017279
(Campylobacter jejuni IA3902)

5e-28

175) pglC
( YP_002344517.1 )

galactosyltransferase

NC_002163
(Campylobacter jejuni NCTC 11168)

5e-28

176) pglC
( YP_006633266.1 )

galactosyltransferase

NC_018521
(Campylobacter jejuni NCTC 11168-BN148)

5e-28

177) Cbei_4739
( YP_001311803.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_009617
(Clostridium beijerinckii NCIMB 8052)

5e-28

178) A911_05445
( YP_006858151.1 )

galactosyltransferase

NC_018709
(Campylobacter jejuni PT14)

6e-28

179) GTCCBUS3UF5_37190
( YP_004984119.1 )

putative sugar transferase epsL

NC_016593
(Geobacillus thermoleovorans CCB_US3_UF5)

6e-28

180) Hore_22910
( YP_002510031.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_011899
(Halothermothrix orenii H 168)

7e-28

181) PflA506_1713
( YP_006323219.1 )

sugar transferase

NC_017911
(Pseudomonas fluorescens A506)

8e-28

182) TK90_1539
( YP_003460777.1 )

sugar transferase

NC_013889
(Thioalkalivibrio sp. K90mix)

8e-28

183) NIDE2694
( YP_003798325.1 )

exopolysaccharide production protein

NC_014355
(Candidatus Nitrospira defluvii )

1e-27

184) Hoch_5256
( YP_003269634.1 )

UDP-phosphate galactose phosphotransferase

NC_013440
(Haliangium ochraceum DSM 14365)

1e-27

185) pglC
( YP_001000801.1 )

general glycosylation pathway protein

NC_008787
(Campylobacter jejuni 81-176)

1e-27

186) pglC
( YP_001482640.1 )

general glycosylation pathway protein

NC_009839
(Campylobacter jejuni 81116)

1e-27

187) ICDCCJ07001_1079
( YP_004066604.1 )

general glycosylation pathway protein

NC_014802
(Campylobacter jejuni ICDCCJ07001)

1e-27

188) pglC
( YP_005658046.1 )

General glycosylation pathway protein

NC_017280
(Campylobacter jejuni M1)

1e-27

189) BPUM_3073
( YP_001488287.1 )

sugar transferase

NC_009848
(Bacillus pumilus SAFR-032)

2e-27

190) Amico_1717
( YP_003554556.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014011
(Aminobacterium colombiense DSM 12261)

2e-27

191) DP0030
( YP_063766.1 )

galactosyltransferase

NC_006138
(Desulfotalea psychrophila LSv54)

2e-27

192) Mesci_4956
( YP_004144111.1 )

sugar transferase

NC_014923
(Mesorhizobium ciceri WSM1271)

2e-27

193) CC_1486
( NP_420297.1 )

hypothetical protein

NC_002696
(Caulobacter crescentus CB15)

3e-27

194) CCNA_01553
( YP_002516926.1 )

UDP-phosphate beta-N-acetyl-D-fucosaminephosphotransferase

NC_011916
(Caulobacter crescentus NA1000)

3e-27

195) CPE0493
( NP_561409.1 )

capsular polysaccharide biosynthsis protein

NC_003366
(Clostridium perfringens 13)

3e-27

196) Slip_0172
( YP_003701537.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014220
(Syntrophothermus lipocalidus DSM 12680)

3e-27

197) Fisuc_2649
( YP_003250714.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_013410
(Fibrobacter succinogenes S85)

4e-27

198) FSU_3219
( YP_005822963.1 )

sugar transferase

NC_017448
(Fibrobacter succinogenes S85)

4e-27

199) Sgly_1515
( YP_004265817.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_015172
(Syntrophobotulus glycolicus DSM 8271)

4e-27

200) LEUM_1433
( YP_818899.1 )

lipopolysaccharide synthesis sugar transferase

NC_008531
(Leuconostoc mesenteroides ATCC 8293)

5e-27

201) cpsE1
( YP_007454209.1 )

galactosyl transferase CpsE

NC_020291
(Clostridium saccharoperbutylacetonicum N1-4(HMT))

6e-27

202) ELI_1800
( YP_003959747.1 )

pilin glycosylation protein PglB

NC_014624
(Eubacterium limosum KIST612)

7e-27

203) Desor_5142
( YP_004973046.1 )

glycosyl transferase family protein

NC_016584
(Desulfosporosinus orientis DSM 765)

7e-27

204) SpiBuddy_0367
( YP_004246397.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_015152
(Sphaerochaeta globosa Buddy)

7e-27

205) Ftrac_0334
( YP_004052451.1 )

sugar transferase

NC_014759
(Marivirga tractuosa DSM 4126)

8e-27

206) MARHY2534
( YP_005430421.1 )

UDP-galactose phosphate transferase

NC_017067
(Marinobacter hydrocarbonoclasticus ATCC 49840)

8e-27

207) GM18_1456
( YP_004198200.1 )

sugar transferase

NC_014973
(Geobacter sp. M18)

1e-26

208) CPF_0466
( YP_694923.1 )

capsular polysaccharide biosynthesis protein

NC_008261
(Clostridium perfringens ATCC 13124)

1e-26

209) Halha_2389
( YP_007316356.1 )

exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase

NC_019978
(Halobacteroides halobius DSM 5150)

1e-26

210) pglC
( YP_179254.1 )

general glycosylation pathway protein

NC_003912
(Campylobacter jejuni RM1221)

1e-26

211) CJS3_1170
( YP_005659729.1 )

Lipid carrier : UDP-N-acetylgalactosaminyltransferase

NC_017281
(Campylobacter jejuni S3)

1e-26

212) Chro_1199
( YP_007090595.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_019695
(Chroococcidiopsis thermalis PCC 7203)

1e-26

213) Desku_1737
( YP_004517107.1 )

UDP-phosphate galactose phosphotransferase

NC_015573
(Desulfotomaculum kuznetsovii DSM 6115)

1e-26

214) Mahau_0047
( YP_004462092.1 )

sugar transferase

NC_015520
(Mahella australiensis 50-1 BON)

2e-26

215) HMPREF0409_01488
( YP_008018601.1 )

hypothetical protein

NC_021281
(Fusobacterium sp. 4_8)

2e-26

216) BJAB0715_00110
( YP_008215258.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021733
(Acinetobacter baumannii BJAB0715)

2e-26

217) weeH
( YP_007594616.1 )

UDP-N-acetylgalactosaminyltransferase

NC_020547
(Acinetobacter baumannii D1279779)

2e-26

218) ABTJ_03748
( YP_006291591.1 )

glycosyl transferase

NC_017847
(Acinetobacter baumannii MDR-TJ)

2e-26

219) ABZJ_00092
( YP_005524048.1 )

putative UDP-galactose phosphate transferase (WeeH)

NC_017171
(Acinetobacter baumannii MDR-ZJ06)

2e-26

220) PADK2_08600
( YP_006481715.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_018080
(Pseudomonas aeruginosa DK2)

2e-26

221) M062_16825
( YP_008133778.1 )

sugar transferase

NC_021577
(Pseudomonas aeruginosa RP73)

2e-26

222) C248_0118
( YP_006708880.1 )

sugar transferase

NC_018608
(Staphylococcus aureus 08BA02176)

2e-26

223) SAAG_00612
( YP_008448125.1 )

glycosyl transferase

NC_022113
(Staphylococcus aureus 55/2053)

2e-26

224) ST398NM01_0143
( YP_006194290.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_017673
(Staphylococcus aureus 71193)

2e-26

225) SAA6008_00107
( YP_005743501.1 )

sugar transferase

NC_017341
(Staphylococcus aureus JKD6008)

2e-26

226) HMPREF0772_10369
( YP_005746451.1 )

sugar transferase

NC_017342
(Staphylococcus aureus TCH60)

2e-26

227) SATW20_01400
( YP_005730162.1 )

putative sugar transferase

NC_017331
(Staphylococcus aureus TW20)

2e-26

228) CCV52592_1211
( YP_001407709.1 )

putative sugar transferase

NC_009715
(Campylobacter curvus 525.92)

2e-26

229) MC28_2849
( YP_006829670.1 )

amino acid-binding ACT domain-containing protein

NC_018693
(Bacillus thuringiensis MC28)

3e-26

230) SELR_17370
( YP_005433468.1 )

putative sugar transferase

NC_017068
(Selenomonas ruminantium TAM6421)

3e-26

231) CLH_3210
( YP_001922575.1 )

galactosyl transferase CpsE

NC_010723
(Clostridium botulinum Alaska E43)

3e-26

232) PSE_2935
( YP_005081465.1 )

UDP-galactose phosphate transferase

NC_016642
(Pseudovibrio sp. FO-BEG1)

3e-26

233) SA2981_0130
( YP_005740879.1 )

Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase; teichuronic acid biosynthesis glycosyltransferase TuaA

NC_017340
(Staphylococcus aureus 04-02981)

3e-26

234) SABB_05546
( YP_008167292.1 )

putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase

NC_021670
(Staphylococcus aureus Bmb9393)

3e-26

235) ECTR2_85
( YP_005748838.1 )

sugar transferase family protein

NC_017343
(Staphylococcus aureus ECT-R 2)

3e-26

236) SAAV_0097
( YP_003281050.1 )

sugar transferase

NC_013450
(Staphylococcus aureus ED98)

3e-26

237) SaurJH1_0120
( YP_001315269.1 )

sugar transferase

NC_009632
(Staphylococcus aureus JH1)

3e-26

238) SaurJH9_0115
( YP_001245498.1 )

sugar transferase

NC_009487
(Staphylococcus aureus JH9)

3e-26

239) SAR0131
( YP_039596.1 )

sugar transferase

NC_002952
(Staphylococcus aureus MRSA252)

3e-26

240) SAHV_0128
( YP_001440718.1 )

hypothetical protein

NC_009782
(Staphylococcus aureus Mu3)

3e-26

241) SAV0129
( NP_370653.1 )

capsular polysaccharide biosynthesis protein

NC_002758
(Staphylococcus aureus Mu50)

3e-26

242) SA0124
( NP_373366.1 )

hypothetical protein

NC_002745
(Staphylococcus aureus N315)

3e-26

243) SAI6T6_1000840
( YP_007582694.1 )

Similar to capsular polysaccharide biosynthesis

NC_020536
(Staphylococcus aureus ST228)

3e-26

244) SAI5S5_1000840
( YP_007620409.1 )

Similar to capsular polysaccharide biosynthesis

NC_020566
(Staphylococcus aureus ST228)

3e-26

245) SAI8T7_1000840
( YP_007622395.1 )

Similar to capsular polysaccharide biosynthesis

NC_020568
(Staphylococcus aureus ST228)

3e-26

246) SAI1T1_2000840
( YP_007576707.1 )

Similar to capsular polysaccharide biosynthesis

NC_020529
(Staphylococcus aureus ST228 (isolate=10388))

3e-26

247) SAI2T2_1000840
( YP_007618422.1 )

Similar to capsular polysaccharide biosynthesis

NC_020564
(Staphylococcus aureus ST228 (isolate=10497))

3e-26

248) SAI3T3_1000840
( YP_007578715.1 )

Similar to capsular polysaccharide biosynthesis

NC_020532
(Staphylococcus aureus ST228 (isolate=15532))

3e-26

249) SAI4T8_1000840
( YP_007580679.1 )

Similar to capsular polysaccharide biosynthesis

NC_020533
(Staphylococcus aureus ST228 (isolate=16035))

3e-26

250) SAI7S6_1000840
( YP_007584658.1 )

Similar to capsular polysaccharide biosynthesis

NC_020537
(Staphylococcus aureus ST228 (isolate=18412))

3e-26

251) capM2
( YP_008484150.1 )

capsular polysaccharide biosynthesis glycosyltransferase, putative

NC_022222
(Staphylococcus aureus 6850)

3e-26

252) SAOV_0077
( YP_005735596.1 )

teichuronic acid biosynthesis glycosyltransferase

NC_017337
(Staphylococcus aureus ED133)

3e-26

253) SAA6159_00112
( YP_005738280.1 )

sugar transferase

NC_017338
(Staphylococcus aureus JKD6159)

3e-26

254) M013TW_0119
( YP_005296588.1 )

teichuronic acid biosynthesis glycosyltransferase TuaA

NC_016928
(Staphylococcus aureus M013)

3e-26

255) SA40_0096
( YP_008586743.1 )

putative sugar transferase

NC_022443
(Staphylococcus aureus SA40)

3e-26

256) SA957_0111
( YP_008584209.1 )

putative sugar transferase

NC_022442
(Staphylococcus aureus SA957)

3e-26

257) ABTW07_0095
( YP_005796984.1 )

sugar transferase

NC_017387
(Acinetobacter baumannii TCDC-AB0715)

3e-26

258) M3Q_297
( YP_006846624.1 )

hypothetical protein

NC_018706
(Acinetobacter baumannii TYTH-1)

3e-26

259) cap5M
( YP_415583.1 )

capsular polysaccharide biosynthesis glycosyltransferase

NC_007622
(Staphylococcus aureus RF122)

4e-26

260) epsL
( YP_007428368.1 )

putative phosphotransferase involved in extracellular matrix synthesis

NC_020244
(Bacillus subtilis XF-1)

4e-26

261) Osc7112_1248
( YP_007114208.1 )

Undecaprenyl-phosphate galactose phosphotransferase

NC_019729
(Oscillatoria nigro-viridis PCC 7112)

4e-26

262) PAU_04341
( YP_003043169.1 )

sugar transferase

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

5e-26

263) Acid345_3821
( YP_592895.1 )

UDP-phosphate galactosephosphotransferase

NC_008009
(Candidatus Koribacter versatilis Ellin345)

5e-26

264) ABK1_0099
( YP_005512671.1 )

WeeH

NC_017162
(Acinetobacter baumannii 1656-2)

5e-26

265) CA_C3059
( NP_349659.1 )

sugar transferase

NC_003030
(Clostridium acetobutylicum ATCC 824)

5e-26

266) rfbP
( YP_004637713.1 )

sugar transferase

NC_015687
(Clostridium acetobutylicum DSM 1731)

5e-26

267) CEA_G3065
( YP_005672197.1 )

sugar transferase

NC_017295
(Clostridium acetobutylicum EA 2018)

5e-26

268) Sgly_2999
( YP_004267269.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_015172
(Syntrophobotulus glycolicus DSM 8271)

5e-26

269) F92_03235
( YP_007008755.1 )

glycosyltransferase

NC_019537
(Francisella tularensis F92)

6e-26

270) wbtB
( YP_667532.1 )

galactosyl transferase

NC_008245
(Francisella tularensis FSC 198)

6e-26

271) wbtB
( YP_001892098.1 )

galactosyl transferase

NC_010677
(Francisella tularensis FSC147)

6e-26

272) wbtB
( YP_007011582.1 )

galactosyl transferase

NC_019551
(Francisella tularensis FSC200)

6e-26

273) FTA_0627
( YP_001428059.1 )

glycosyltransferase

NC_009749
(Francisella tularensis FTNF002-00)

6e-26

274) FTL_0593
( YP_513353.1 )

galactosyl transferase

NC_007880
(Francisella tularensis LVS)

6e-26

275) NE061598_08170
( YP_005831585.1 )

glycosyltransferase

NC_017453
(Francisella tularensis NE061598)

6e-26

276) FTH_0593
( YP_763194.1 )

galactosyltransferase

NC_008369
(Francisella tularensis OSU18)

6e-26

277) wbtB
( YP_170400.1 )

galactosyl transferase

NC_006570
(Francisella tularensis SCHU S4)

6e-26

278) wbtB
( YP_005318524.1 )

lipid carrier : UDP-N-acetylgalactosaminyltransferase

NC_016937
(Francisella tularensis TI0902)

6e-26

279) wbtB
( YP_005306070.1 )

Lipid carrier : UDP-N-acetylgalactosaminyltransferase

NC_016933
(Francisella tularensis TIGB03)

6e-26

280) wbtB
( YP_001121461.1 )

glycosyltransferase

NC_009257
(Francisella tularensis WY96-3418)

6e-26

281) SARLGA251_01040
( YP_005754115.1 )

putative sugar transferase

NC_017349
(Staphylococcus aureus LGA251)

6e-26

282) KKY_3117
( YP_004900857.1 )

exopolysaccharide production protein

NC_016078
(Pelagibacterium halotolerans B2)

8e-26

283) Q7C_727
( YP_006292585.1 )

Lipid carrier : UDP-N-acetylgalactosaminyltransferase

NC_017856
(Methylophaga sp. JAM7)

1e-25

284) epsL
( YP_006714966.1 )

sugar transferase

NC_006322
(Bacillus licheniformis DSM 13)

1e-25

285) yvfC
( YP_080770.1 )

sugar transferase YvfC

NC_006270
(Bacillus licheniformis DSM 13)

1e-25

286) ABSDF0078
( YP_001705831.1 )

UDP-galactose phosphate transferase (WeeH)

NC_010400
(Acinetobacter baumannii SDF)

1e-25

287) STP_0900
( YP_004479020.1 )

surface-anchored sugar transferase

NC_015558
(Streptococcus parauberis KCTC 11537)

1e-25

288) Taci_0038
( YP_003316560.1 )

UDP-phosphate galactose phosphotransferase

NC_013522
(Thermanaerovibrio acidaminovorans DSM 6589)

7e-26

289) Sde_3797
( YP_529264.1 )

Undecaprenyl-phosphate galactosephosphotransferase

NC_007912
(Saccharophagus degradans 2-40)

7e-26

290) Cfla_0763
( YP_003635873.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014151
(Cellulomonas flavigena DSM 20109)

8e-26

291) AOLE_19075
( YP_003734070.1 )

putative UDP-galactose phosphate transferase (WeeH)

NC_014259
(Acinetobacter oleivorans DR1)

8e-26

292) BMB171_C4873
( YP_003667401.1 )

undecaprenyl-phosphate galactosephosphotransferase

NC_014171
(Bacillus thuringiensis BMB171)

9e-26

293) Cylst_4184
( YP_007148966.1 )

glycosyl transferase possibly involved in lipopolysaccharide synthesis

NC_019757
(Cylindrospermum stagnale PCC 7417)

1e-25

294) CD630_27830
( YP_001089296.1 )

glycosyl transferase family protein

NC_009089
(Clostridium difficile 630)

2e-25

295) CD196_2624
( YP_003215642.1 )

glycosyltransferase

NC_013315
(Clostridium difficile CD196)

2e-25

296) CDR20291_2671
( YP_003219150.1 )

glycosyltransferase

NC_013316
(Clostridium difficile R20291)

2e-25

297) CLOST_0359
( YP_003935394.1 )

putative capsular polysaccharide biosynthesis glycosyltransferase

NC_014614
(Clostridium sticklandii DSM 519)

2e-25

298) HMPREF0946_01291
( YP_008477589.1 )

hypothetical protein

NC_022196
(Fusobacterium sp. 3_1_36A2)

2e-25

299) SYN_02686
( YP_462641.1 )

UDP-phosphate galactosephosphotransferase

NC_007759
(Syntrophus aciditrophicus SB)

2e-25

300) Sden_2648
( YP_563650.1 )

UDP-phosphate galactosephosphotransferase

NC_007954
(Shewanella denitrificans OS217)

2e-25

301) TOPB45_0361
( YP_004627395.1 )

sugar transferase

NC_015682
(Thermodesulfobacterium geofontis OPB45)

2e-25

302) WCGN
( NP_906311.1 )

phosphate transferase

NC_005090
(Wolinella succinogenes DSM 1740)

2e-25

303) GFO_1988
( YP_862020.1 )

exopolysaccharide production related sugar transferase

NC_008571
(Gramella forsetii KT0803)

3e-25

304) epsL
( YP_008079741.1 )

sugar transferase EpsL

NC_021362
(Bacillus licheniformis 9945A)

3e-25

305) yvfC
( YP_005131912.1 )

putative UDP-galactose phosphate transferase

NC_016784
(Bacillus amyloliquefaciens CAU B946)

3e-25

306) BCA_5417
( YP_002752627.1 )

galactosyl transferase CpsE

NC_012472
(Bacillus cereus 03BB102)

3e-25

307) bcf_26440
( YP_005121894.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_016779
(Bacillus cereus F837/76)

3e-25

308) Desor_5324
( YP_004973217.1 )

glycosyl transferase family protein

NC_016584
(Desulfosporosinus orientis DSM 765)

3e-25

309) PCA10_19840
( YP_008102321.1 )

putative glycosyltransferase

NC_021499
(Pseudomonas resinovorans NBRC 106553)

3e-25

310) Elen_2023
( YP_003182376.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_013204
(Eggerthella lenta DSM 2243)

3e-25

311) Daes_3286
( YP_004123020.1 )

sugar transferase

NC_014844
(Desulfovibrio aespoeensis Aspo-2)

4e-25

312) BATR1942_15050
( YP_003974863.1 )

extracellular matrix formation phosphotransferase

NC_014639
(Bacillus atrophaeus 1942)

4e-25

313) epsL
( YP_005176079.1 )

sugar transferase

NC_016808
(Pasteurella multocida 36950)

4e-25

314) wcaJ
( YP_005362648.1 )

sugar transferase

NC_017027
(Pasteurella multocida HN06)

4e-25

315) rfbP
( NP_245948.1 )

protein RfbP

NC_002663
(Pasteurella multocida Pm70)

4e-25

316) tuaA
( NP_244517.1 )

teichuronic acid biosynthesis glycosyltransferase

NC_002570
(Bacillus halodurans C-125)

5e-25

317) epsE
( YP_897467.1 )

sugar transferase

NC_008600
(Bacillus thuringiensis Al Hakam)

5e-25

318) NT08PM_0216
( YP_006239134.1 )

protein RfbP

NC_017764
(Pasteurella multocida 3480)

5e-25

319) BF0817
( YP_098102.1 )

undecaprenyl-phosphate glycosyl-1-phosphate transferase

NC_006347
(Bacteroides fragilis YCH46)

6e-25

320) Tlie_1811
( YP_004933624.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_016148
(Thermovirga lienii DSM 17291)

6e-25

321) CPR_0454
( YP_697783.1 )

glycosyltransferase

NC_008262
(Clostridium perfringens SM101)

6e-25

322) Tmz1t_1126
( YP_002354781.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_011662
(Thauera sp. MZ1T)

6e-25

323) epsL
( YP_007498742.1 )

putative phosphotransferase involved in extracellular matrix synthesis

NC_020410
(Bacillus amyloliquefaciens UCMB5036)

6e-25

324) Sputcn32_2528
( YP_001184048.1 )

sugar transferase

NC_009438
(Shewanella putrefaciens CN-32)

7e-25

325) BcerKBAB4_3389
( YP_001646191.1 )

sugar transferase

NC_010184
(Bacillus weihenstephanensis KBAB4)

8e-25

326) BF0749
( YP_210448.1 )

UDP-galactose phosphate transferase

NC_003228
(Bacteroides fragilis NCTC 9343)

8e-25

327) FN1695
( NP_602511.1 )

quinovosaminephosphotransferae

NC_003454
(Fusobacterium nucleatum ATCC 25586)

9e-25

328) ABO_0925
( YP_692645.1 )

sugar transferase

NC_008260
(Alcanivorax borkumensis SK2)

9e-25

329) KSO_003340
( YP_007444046.1 )

hypothetical protein

NC_020272
(Bacillus amyloliquefaciens IT-45)

9e-25

330) Neut_0185
( YP_746436.1 )

sugar transferase

NC_008344
(Nitrosomonas eutropha C91)

1e-24

331) WcaJ
( NP_622327.1 )

lipopolysaccharide synthesis sugar transferase

NC_003869
(Thermoanaerobacter tengcongensis MB4)

1e-24

332) Dd1591_3387
( YP_003005682.1 )

sugar transferase

NC_012912
(Dickeya zeae Ech1591)

1e-24

333) epsL
( YP_008414267.1 )

putative phosphotransferase involved in extracellular matrix synthesis

NC_022075
(Bacillus amyloliquefaciens UCMB-5033)

1e-24

334) epsL
( YP_006330341.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_017912
(Bacillus amyloliquefaciens Y2)

1e-24

335) Belba_2092
( YP_006407415.1 )

glycosyl transferase

NC_018010
(Belliella baltica DSM 15883)

1e-24

336) CTC02253
( NP_782798.1 )

undecaprenyl-phosphate glucosephosphotransferase

NC_004557
(Clostridium tetani E88)

1e-24

337) Solca_0326
( YP_006254645.1 )

glycosyl transferase

NC_017770
(Solitalea canadensis DSM 3403)

1e-24

338) BDI_0428
( YP_001301828.1 )

lipopolysaccharide synthesis UDP-galactose phosphate transferase

NC_009615
(Parabacteroides distasonis ATCC 8503)

2e-24

339) Desmer_4118
( YP_006623818.1 )

glycosyl transferase

NC_018515
(Desulfosporosinus meridiei DSM 13257)

2e-24

340) HD73_5677
( YP_007424775.1 )

Undecaprenyl-phosphate galactosephosphotransferase

NC_020238
(Bacillus cereus HD73)

2e-24

341) LGMK_03580
( YP_004705397.1 )

capsular polysaccharide synthesis protein

NC_015734
(Leuconostoc sp. C2)

2e-24

342) BCAH187_A5447
( YP_002341336.1 )

exopolysaccharide production protein ExoY

NC_011658
(Bacillus cereus AH187)

2e-24

343) Dtur_0586
( YP_002352488.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_011661
(Dictyoglomus turgidum DSM 6724)

2e-24

344) Sta7437_4167
( YP_007134610.1 )

Undecaprenyl-phosphate galactose phosphotransferase

NC_019748
(Stanieria cyanosphaera PCC 7437)

2e-24

345) wcgN
( YP_005356710.1 )

putative undecaprenyl-phosphate glycosyl-1-phosphate transferase

NC_017025
(Flavobacterium indicum GPTSA100-9)

3e-24

346) Cha6605_4205
( YP_007098675.1 )

glycosyl transferase possibly involved in lipopolysaccharide synthesis

NC_019697
(Chamaesiphon minutus PCC 6605)

3e-24

347) Clopa_0854
( YP_007939555.1 )

exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase

NC_021182
(Clostridium pasteurianum BC1)

3e-24

348) Cgl0349
( NP_599600.1 )

lipopolysaccharide synthesis sugar transferase

NC_003450
(Corynebacterium glutamicum ATCC 13032)

3e-24

349) WA5_0342
( YP_007559602.1 )

sugar transferase involved in lipopolysaccharide synthesis

NC_020519
(Corynebacterium glutamicum ATCC 13032)

3e-24

350) cg0419
( YP_224649.1 )

glycosyltransferase

NC_006958
(Corynebacterium glutamicum ATCC 13032)

3e-24

351) cgp_0419
( YP_008400493.1 )

putative glycosyltransferase

NC_022040
(Corynebacterium glutamicum MB001)

3e-24

352) OB2892
( NP_693814.1 )

UDP-galactose phosphate transferase

NC_004193
(Oceanobacillus iheyensis HTE831)

3e-24

353) BMWSH_4117
( YP_005496306.1 )

galactosyl transferase CpsE

NC_017138
(Bacillus megaterium WSH-002)

4e-24

354) Coch_0716
( YP_003140835.1 )

sugar transferase

NC_013162
(Capnocytophaga ochracea DSM 7271)

4e-24

355) Clopa_0847
( YP_007939548.1 )

glycosyl transferase possibly involved in lipopolysaccharide synthesis

NC_021182
(Clostridium pasteurianum BC1)

5e-24

356) pss
( YP_004675565.1 )

Exopolysaccharide production protein PSS

NC_015717
(Hyphomicrobium sp. MC1)

5e-24

357) Acear_2157
( YP_003828708.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014378
(Acetohalobium arabaticum DSM 5501)

5e-24

358) Bache_2447
( YP_004161999.1 )

UDP-phosphate galactose phosphotransferase

NC_014933
(Bacteroides helcogenes P 36-108)

5e-24

359) H045_04725
( YP_007396517.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_020209
(Pseudomonas poae RE*1-1-14)

5e-24

360) epsE1
( YP_003772170.1 )

exopolysaccharide phosphogalactosyltransferase

NC_014319
(Leuconostoc gasicomitatum LMG 18811)

6e-24

361) CA347_141
( YP_008127024.1 )

bacterial sugar transferase family protein

NC_021554
(Staphylococcus aureus CA-347)

6e-24

362) SAKOR_00105
( YP_008490289.1 )

Undecaprenyl-phosphate galactosephosphotransferase

NC_022226
(Staphylococcus aureus CN1)

7e-24

363) SACOL0114
( YP_185018.1 )

capsular polysaccharide biosynthesis glycosyltransferase

NC_002951
(Staphylococcus aureus COL)

7e-24

364) SAUSA300_0131
( YP_492848.1 )

putative sugar transferase

NC_007793
(Staphylococcus aureus FPR3757)

7e-24

365) BN843_1320
( YP_007867211.1 )

Putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase; teichuronic acid biosynthesis glycosyltransferase TuaA

NC_021059
(Staphylococcus aureus M1)

7e-24

366) SAS0103
( YP_042228.1 )

sugar transferase

NC_002953
(Staphylococcus aureus MSSA476)

7e-24

367) MW0103
( NP_644918.1 )

hypothetical protein

NC_003923
(Staphylococcus aureus MW2)

7e-24

368) SAOUHSC_00089
( YP_498690.1 )

hypothetical protein

NC_007795
(Staphylococcus aureus NCTC 8325)

7e-24

369) NWMN_0073
( YP_001331108.1 )

hypothetical protein

NC_009641
(Staphylococcus aureus Newman)

7e-24

370) USA300HOU_0141
( YP_001574057.1 )

glycosyltransferase

NC_010079
(Staphylococcus aureus TCH1516)

7e-24

371) SAVC_00385
( YP_005289678.1 )

putative sugar transferase

NC_016912
(Staphylococcus aureus VC40)

7e-24

372) EHR_03780
( YP_006486617.1 )

priming glycosyltransferase

NC_018081
(Enterococcus hirae ATCC 9790)

7e-24

373) SFBM_0053
( YP_004770577.1 )

glycosyltransferase

NC_015913
(Candidatus Arthromitus sp. mouse isolate)

7e-24

374) MOUSESFB_0053
( YP_005667771.1 )

capsular polysaccharide biosynthesis protein

NC_017294
(Candidatus Arthromitus sp. SFB-mouse-Yit)

7e-24

375) PSE_1165
( YP_005079699.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_016642
(Pseudovibrio sp. FO-BEG1)

8e-24

376) Sbal117_3015
( YP_006038198.1 )

sugar transferase

NC_017579
(Shewanella baltica OS117)

8e-24

377) Sbal_2877
( YP_001051229.1 )

sugar transferase

NC_009052
(Shewanella baltica OS155)

8e-24

378) SSUST3_0743
( YP_004401385.1 )

UDP-galactose phosphate transferase

NC_015433
(Streptococcus suis ST3)

8e-24

379) SH0385
( YP_252300.1 )

hypothetical protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

8e-24

380) C624_02165
( YP_008065152.1 )

glycosyltransferase

NC_021351
(Corynebacterium glutamicum SCgG1)

8e-24

381) C629_02165
( YP_008068175.1 )

glycosyltransferase

NC_021352
(Corynebacterium glutamicum SCgG2)

8e-24

382) ECBG_00490
( YP_007752356.1 )

hypothetical protein

NC_020995
(Enterococcus casseliflavus EC20)

1e-23

383) pglC
( YP_002575826.1 )

galactosyltransferase

NC_012039
(Campylobacter lari RM2100)

1e-23

384) pss
( YP_005950925.1 )

exopolysaccharide production protein Pss

NC_017538
(Oligotropha carboxidovorans OM4)

1e-23

385) pss
( YP_004632862.1 )

exopolysaccharide production protein Pss

NC_015684
(Oligotropha carboxidovorans OM5)

1e-23

386) OCAR_6119
( YP_002289099.1 )

glucosyltransferase EpsB

NC_011386
(Oligotropha carboxidovorans OM5; ATCC 49405)

1e-23

387) Meso_0778
( YP_673343.1 )

sugar transferase

NC_008254
(Chelativorans sp. BNC1)

1e-23

388) pglC
( YP_008562445.1 )

galactosyltransferase

NC_022362
(jejuni jejuni 00-2425)

1e-23

389) pglC
( YP_008540705.1 )

galactosyltransferase

NC_022352
(jejuni jejuni 00-2426)

1e-23

390) pglC
( YP_008539026.1 )

galactosyltransferase

NC_022351
(jejuni jejuni 00-2538)

1e-23

391) pglC
( YP_008542425.1 )

galactosyltransferase

NC_022353
(jejuni jejuni 00-2544)

1e-23

392) SAEMRSA15_00960
( YP_006236471.1 )

putative sugar transferase

NC_017763
(Staphylococcus aureus HO 5096 0412)

1e-23

393) Palpr_0955
( YP_004042090.1 )

sugar transferase

NC_014734
(Paludibacter propionicigenes WB4)

1e-23

394) SVI_1491
( YP_003556240.1 )

galactosyl transferase

NC_014012
(Shewanella violacea DSS12)

2e-23

395) DCF50_p2685
( YP_006914673.1 )

Undecaprenyl-phosphate galactosephosphotransferase

NC_018867
(Dehalobacter sp. CF)

2e-23

396) DHBDCA_p2674
( YP_006911686.1 )

Undecaprenyl-phosphate galactosephosphotransferase

NC_018866
(Dehalobacter sp. DCA)

2e-23

397) EHR_08925
( YP_006487596.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_018081
(Enterococcus hirae ATCC 9790)

2e-23

398) epsL
( YP_005327376.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_016943
(Blastococcus saxobsidens DD2)

2e-23

399) cps2E
( YP_004648614.1 )

glycosyl transferase domain-containing protein

NC_015697
(Lactobacillus reuteri SD2112)

2e-23

400) Theam_0675
( YP_004151284.1 )

Undecaprenyl-phosphate galactose phosphotransferase

NC_014926
(Thermovibrio ammonificans HB-1)

2e-23

401) BCB4264_A5394
( YP_002370048.1 )

glucosyltransferase EpsB

NC_011725
(Bacillus cereus B4264)

3e-23

402) GC56T3_3306
( YP_003672796.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014206
(Geobacillus sp. C56-T3)

3e-23

403) Ajs_3034
( YP_987244.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_008782
(Acidovorax sp. JS42)

3e-23

404) Clocel_0896
( YP_003842430.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014393
(Clostridium cellulovorans 743B)

4e-23

405) GNIT_2483
( YP_004872573.1 )

sugar transferase

NC_016041
(Glaciecola nitratireducens FR1064)

4e-23

406) G157_03315
( YP_008533371.1 )

galactosyltransferase

NC_022347
(Campylobacter coli CVM N29710)

4e-23

407) CHAB381_0952
( YP_001406513.1 )

general glycosylation pathway protein

NC_009714
(Campylobacter hominis ATCC BAA-381)

4e-23

408) Caur_0948
( YP_001634569.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_010175
(Chloroflexus aurantiacus J-10-fl)

4e-23

409) Chy400_1034
( YP_002568782.1 )

UDP-phosphate galactose phosphotransferase

NC_012032
(Chloroflexus sp. Y-400-fl)

4e-23

410) epsL
( YP_007371779.1 )

putative sugar transferase EpsL

NC_020134
(Clostridium stercorarium DSM 8532)

5e-23

411) BMQ_1117
( YP_003561584.1 )

glycosyltransferase

NC_014019
(Bacillus megaterium QM B1551)

5e-23

412) yvfC
( YP_002773729.1 )

polysaccharide biosynthesis protein

NC_012491
(Brevibacillus brevis NBRC 100599)

5e-23

413) K210_09265
( YP_008074360.1 )

sugar transferase

NC_021354
(Erysipelothrix rhusiopathiae SY1027)

5e-23

414) BN865_10040
( YP_008473660.1 )

UDP-N-acetylgalactosaminyltransferase , CAzY family GT4

NC_022132
(Campylobacter coli 76339)

5e-23

415) ERH_0406
( YP_004560505.1 )

sugar transferase

NC_015601
(Erysipelothrix rhusiopathiae Fujisawa)

6e-23

416) WcaJ
( YP_001211650.1 )

sugar transferases

NC_009454
(Pelotomaculum thermopropionicum SI)

8e-23

417) Ccan_23390
( YP_004741561.1 )

sugar transferase epsL

NC_015846
(Capnocytophaga canimorsus Cc5)

1e-22

418) Mfla_1277
( YP_545386.1 )

sugar transferase

NC_007947
(Methylobacillus flagellatus KT)

1e-22

419) tuaA
( YP_006715085.1 )

undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase TuaA

NC_006322
(Bacillus licheniformis DSM 13)

1e-22

420) tuaA
( YP_080888.1 )

TuaA

NC_006270
(Bacillus licheniformis DSM 13)

1e-22

421) Krodi_2762
( YP_004432005.1 )

UDP-phosphate galactose phosphotransferase

NC_015496
(Krokinobacter sp. 4H-3-7-5)

1e-22

422) Calkr_2285
( YP_004027352.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

1e-22

423) LRI_0878
( YP_008099232.1 )

glycosyl transferase domain-containing protein

NC_021494
(Lactobacillus reuteri I5007)

1e-22

424) EFD32_1897
( YP_006538258.1 )

undecaprenyl- phosphategalactosephosphotransferase

NC_018221
(Enterococcus faecalis D32)

1e-22

425) Sulku_2410
( YP_004061270.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014762
(Sulfuricurvum kujiense DSM 16994)

1e-22

426) tuaA
( YP_005562899.1 )

teichuronic acid synthesis protein TuaA

NC_017196
(Bacillus subtilis BEST195)

1e-22

427) wbfU
( NP_718728.1 )

galactosyl transferase WbfU

NC_004347
(Shewanella oneidensis MR-1)

7e-23

428) B565_2776
( YP_004393428.1 )

galactosyl transferase

NC_015424
(Aeromonas veronii B565)

7e-23

429) Nther_2523
( YP_001918672.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_010718
(Natranaerobius thermophilus JW/NM-WN-LF)

7e-23

430) MC28_4509
( YP_006831330.1 )

hypothetical protein

NC_018693
(Bacillus thuringiensis MC28)

7e-23

431) Emtol_2069
( YP_006873235.1 )

sugar transferase

NC_018748
(Emticicia oligotrophica DSM 17448)

8e-23

432) Cspa_c53480
( YP_007458347.1 )

sugar transferase

NC_020291
(Clostridium saccharoperbutylacetonicum N1-4(HMT))

2e-22

433) CL3_01630
( YP_007809163.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021024
(butyrate-producing bacterium SM4/1)

2e-22

434) epsL
( YP_005422667.1 )

undecaprenyl-phosphate galactose phosphotransferase EpsL

NC_017061
(Bacillus amyloliquefaciens YAU B9601-Y2)

3e-22

435) tuaA
( YP_008079857.1 )

putative undecaprenyl-phosphate N-acetylgalactosaminyl 1-phosphate transferase TuaA

NC_021362
(Bacillus licheniformis 9945A)

3e-22

436) NE0501
( NP_840586.1 )

sugar transferase

NC_004757
(Nitrosomonas europaea ATCC 19718)

3e-22

437) BCG9842_B5557
( YP_002448809.1 )

galactosyl transferase CpsE

NC_011772
(Bacillus cereus G9842)

3e-22

438) DSY3342
( YP_519575.1 )

hypothetical protein

NC_007907
(Desulfitobacterium hafniense Y51)

3e-22

439) H681_23270
( YP_007660061.1 )

sugar transferase

NC_020829
(Pseudomonas denitrificans ATCC 13867)

4e-22

440) CA2559_10743
( YP_003716892.1 )

UDP-phosphate glycosyl-1-phosphate transferase

NC_014230
(Croceibacter atlanticus HTCC2559)

4e-22

441) B739_1134
( YP_006723632.1 )

sugar transferase

NC_018609
(Riemerella anatipestifer RA-CH-1)

4e-22

442) Dtox_2852
( YP_003192240.1 )

UDP-phosphate galactose phosphotransferase

NC_013216
(Desulfotomaculum acetoxidans DSM 771)

4e-22

443) Rumal_0401
( YP_004103590.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014833
(Ruminococcus albus 7)

4e-22

444) Sbal223_1485
( YP_002357415.1 )

sugar transferase

NC_011663
(Shewanella baltica OS223)

5e-22

445) Clst_0134
( YP_007678265.1 )

sugar transferase

NC_020887
(Clostridium stercorarium DSM 8532)

5e-22

446) Dda3937_02272
( YP_003881471.1 )

Lipid carrier : UDP-N-acetylgalactosaminyltransferase

NC_014500
(Dickeya dadantii 3937)

6e-22

447) M5M_13285
( YP_006917531.1 )

undecaprenyl-phosphate galactosephosphotransferase

NC_018868
(Simiduia agarivorans SA1)

6e-22

448) ELI_13365
( YP_459562.1 )

UDP-galactose phosphate transferase

NC_007722
(Erythrobacter litoralis HTCC2594)

7e-22

449) epsE1
( YP_005958738.1 )

undecaprenyl-phosphate galactose phosphotransferase Galactosyl-P-P-undecaprenol synthetase

NC_017542
(Paenibacillus polymyxa M1)

7e-22

450) PPSC2_c1203
( YP_003945424.1 )

galactosyl transferase cpse

NC_014622
(Paenibacillus polymyxa SC2)

7e-22

451) Acear_2136
( YP_003828689.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014378
(Acetohalobium arabaticum DSM 5501)

7e-22

452) Dfer_3631
( YP_003088001.1 )

sugar transferase

NC_013037
(Dyadobacter fermentans DSM 18053)

8e-22

453) Ppha_0574
( YP_002017503.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_011060
(Pelodictyon phaeoclathratiforme BU-1)

8e-22

454) wcgN
( YP_004843881.1 )

putative undecaprenyl-phosphate glycosyl-1-phosphate transferase

NC_016001
(Flavobacterium branchiophilum FL-15)

9e-22

455) Sph21_2065
( YP_004317294.1 )

sugar transferase

NC_015277
(Sphingobacterium sp. 21)

9e-22

456) SY1_13610
( YP_007827698.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021038
(Synergistetes bacterium SGP1)

1e-21

457) F7308_0841
( YP_004647368.1 )

lipid carrier : UDP-N-acetylgalactosaminyltransferase

NC_015696
(Francisella sp. TX077308)

9e-22

458) C269_03375
( YP_006745004.1 )

lipopolysaccharide synthesis sugar transferase

NC_018631
(Leuconostoc gelidum JB7)

9e-22

459) CPE0473
( NP_561389.1 )

UDP-galactose phosphate transferase

NC_003366
(Clostridium perfringens 13)

1e-21

460) Desde_3862
( YP_006431922.1 )

glycosyl transferase

NC_018017
(Desulfitobacterium dehalogenans ATCC 51507)

1e-21

461) TOL_2267
( YP_007682906.1 )

sugar transferase

NC_020888
(Thalassolituus oleivorans MIL-1)

1e-21

462) MI1_06335
( YP_005174677.1 )

lipopolysaccharide synthesis sugar transferase

NC_016805
(Leuconostoc mesenteroides J18)

1e-21

463) TK90_0609
( YP_003459860.1 )

UDP-phosphate galactose phosphotransferase

NC_013889
(Thioalkalivibrio sp. K90mix)

2e-21

464) CPS_3248
( YP_269938.1 )

polysaccharide biosynthesis glycosyltransferase

NC_003910
(Colwellia psychrerythraea 34H)

2e-21

465) Ctha_2149
( YP_001997048.1 )

sugar transferase

NC_011026
(Chloroherpeton thalassium ATCC 35110)

2e-21

466) DDD_3536
( YP_007378684.1 )

capsular polysaccharide synthesis protein

NC_020156
(Nonlabens dokdonensis DSW-6)

3e-21

467) SELR_26920
( YP_005434423.1 )

putative sugar transferase

NC_017068
(Selenomonas ruminantium TAM6421)

3e-21

468) G148_0877
( YP_007355875.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_020125
(Riemerella anatipestifer RA-CH-2)

3e-21

469) RIA_1504
( YP_006017938.1 )

sugar transferase

NC_017569
(Riemerella anatipestifer RA-GD)

3e-21

470) CPR_0584
( YP_697911.1 )

glycosyltransferase

NC_008262
(Clostridium perfringens SM101)

4e-21

471) GTNG_3263
( YP_001127347.1 )

priming glycosyltransferase

NC_009328
(Geobacillus thermodenitrificans NG80-2)

4e-21

472) Dd703_3271
( YP_002988855.1 )

sugar transferase

NC_012880
(Dickeya dadantii Ech703)

4e-21

473) Swoo_1664
( YP_001760045.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_010506
(Shewanella woodyi ATCC 51908)

4e-21

474) Acear_2114
( YP_003828669.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_014378
(Acetohalobium arabaticum DSM 5501)

5e-21

475) Dhaf_4500
( YP_002460937.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_011830
(Desulfitobacterium hafniense DCB-2)

6e-21

476) Theco_3164
( YP_007214218.1 )

glycosyl transferase

NC_019897
(Thermobacillus composti KWC4)

6e-21

477) pssZ
( YP_002517840.1 )

polyisoprenylphosphate hexose-1-phosphotransferase PssZ

NC_011916
(Caulobacter crescentus NA1000)

7e-21

478) BMD_1115
( YP_003596326.1 )

galactosyl transferase cpsE

NC_014103
(Bacillus megaterium DSM 319)

8e-21

479) Veis_3055
( YP_997806.1 )

sugar transferase

NC_008786
(Verminephrobacter eiseniae EF01-2)

8e-21

480) HBHAL_1970
( YP_006179608.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_017668
(Halobacillus halophilus DSM 2266)

8e-21

481) GU3_12800
( YP_005093065.1 )

sugar transferase

NC_016745
(Oceanimonas sp. GK1)

9e-21

482) MS7_0120
( YP_005756585.1 )

bacterial sugar transferase family protein

NC_017351
(Staphylococcus aureus 11819-97)

1e-20

483) YBT020_08580
( YP_005565380.1 )

undecaprenyl- phosphategalactosephosphotransferase

NC_017200
(Bacillus thuringiensis YBT-020)

1e-20

484) D805_0347
( YP_007593054.1 )

Undecaprenyl-phosphate galactosephosphotransferase

NC_020546
(Bifidobacterium thermophilum RBL67)

1e-20

485) GK3319
( YP_149172.1 )

lipopolysaccharide synthesis sugar transferase

NC_006510
(Geobacillus kaustophilus HTA426)

1e-20

486) Bsph_0524
( YP_001696279.1 )

galactosyl transferase cpsE

NC_010382
(Lysinibacillus sphaericus C3-41)

1e-20

487) Calni_0128
( YP_004050205.1 )

sugar transferase

NC_014758
(Calditerrivibrio nitroreducens DSM 19672)

2e-20

488) CKL_3161
( YP_001396540.1 )

undecaprenyl-phosphate galactosephosphotransferase

NC_009706
(Clostridium kluyveri DSM 555)

2e-20

489) CKR_2799
( YP_002473264.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

2e-20

490) B1NLA3E_20075
( YP_007912256.1 )

undecaprenyl-phosphate galactosephosphotransferase

NC_021171
(Bacillus sp. 1NLA3E)

2e-20

491) sync_0183
( YP_729420.1 )

undecaprenyl-phosphate glucosephosphotransferase

NC_008319
(Synechococcus sp. CC9311)

2e-20

492) Riean_0747
( YP_004045417.1 )

sugar transferase

NC_014738
(Riemerella anatipestifer ATCC 11845)

3e-20

493) RA0C_0984
( YP_005394460.1 )

sugar transferase

NC_017045
(Riemerella anatipestifer ATCC 11845)

3e-20

494) ECBG_01726
( YP_007751826.1 )

hypothetical protein

NC_020995
(Enterococcus casseliflavus EC20)

3e-20

495) welE
( YP_003171789.1 )

UDP-phosphate beta-glucosephosphotransferase

NC_013198
(Lactobacillus rhamnosus GG)

3e-20

496) LRHM_1964
( YP_005866456.1 )

putative glycosyltransferase

NC_017482
(Lactobacillus rhamnosus GG)

3e-20

497) Mesop_5467
( YP_004613977.1 )

sugar transferase

NC_015675
(Mesorhizobium opportunistum WSM2075)

3e-20

498) BTG_22035
( YP_006605856.1 )

undecaprenyl-phosphate N-acetylgalactosaminyl-1-phosphate transferase

NC_018500
(Bacillus thuringiensis HD-771)

4e-20

499) BTF1_24740
( YP_006613031.1 )

putative undecaprenyl-phosphate N-acetylgalactosaminyl-1-phosphate transferase

NC_018508
(Bacillus thuringiensis HD-789)

4e-20

500) Cycma_0366
( YP_004772376.1 )

sugar transferase

NC_015914
(Cyclobacterium marinum DSM 745)

4e-20

501) Ornrh_0868
( YP_006426857.1 )

glycosyl transferase

NC_018016
(Ornithobacterium rhinotracheale DSM 15997)

5e-20

502) CPS_0590
( YP_267340.1 )

polysaccharide biosynthesis glycosyltransferase

NC_003910
(Colwellia psychrerythraea 34H)

6e-20

503) CbC4_1010
( YP_004395687.1 )

sugar transferase

NC_015425
(Clostridium botulinum BKT015925)

7e-20

504) cps2E
( YP_007994294.1 )

Sugar transferase

NC_021235
(Lactobacillus fermentum F-6)

9e-20

505) wcaJ
( YP_677824.1 )

UDP-glucose lipid carrier transferase

NC_008255
(Cytophaga hutchinsonii ATCC 33406)

1e-19

506) K210_05660
( YP_008073679.1 )

sugar transferase

NC_021354
(Erysipelothrix rhusiopathiae SY1027)

1e-19

507) GHH_c34090
( YP_007403650.1 )

hypothetical protein

NC_020210
(Geobacillus sp. GHH01)

1e-19

508) KUM_0481
( YP_007821453.1 )

putative glycosyltransferase

NC_021033
(Taylorella asinigenitalis 14/45)

2e-19

509) BF638R_1092
( YP_005110198.1 )

putative UDP-galactose phosphate transferase

NC_016776
(Bacteroides fragilis 638R)

2e-19

510) BF1110
( YP_098394.1 )

undecaprenyl-phosphate glycosyl-1-phosphate transferase

NC_006347
(Bacteroides fragilis YCH46)

2e-19

511) FMG_0581
( YP_001691889.1 )

putative glycosyltransferase

NC_010376
(Finegoldia magna ATCC 29328)

2e-19

512) SPISAL_08120
( YP_008047183.1 )

sugar transferase

NC_021291
(Spiribacter salinus M19-40)

2e-19

513) NT01CX_1797
( YP_877870.1 )

undecaprenyl-phosphate glucosephosphotransferase

NC_008593
(Clostridium novyi NT)

3e-19

514) cpsE3
( YP_007455604.1 )

galactosyl transferase CpsE

NC_020291
(Clostridium saccharoperbutylacetonicum N1-4(HMT))

3e-19

515) CLM_3499
( YP_002805614.1 )

sugar transferase family protein

NC_012563
(Clostridium botulinum Kyoto)

4e-19

516) Marme_0732
( YP_004311851.1 )

sugar transferase

NC_015276
(Marinomonas mediterranea MMB-1)

5e-19

517) Riv7116_3145
( YP_007056165.1 )

glycosyl transferase

NC_019678
(Rivularia sp. PCC 7116)

5e-19

518) pssAc
( YP_001985460.1 )

exopolysaccharide production CDP-diacylglycerol-serine O-phosphatidyltransferase

NC_010997
(Rhizobium etli CIAT 652)

5e-19

519) CBF_3141
( YP_005675940.1 )

bacterial sugar transferase family protein

NC_017297
(Clostridium botulinum 230613)

1e-18

520) CLI_3152
( YP_001392371.1 )

sugar transferase

NC_009699
(Clostridium botulinum Langeland)

1e-18

521) CLD_1447
( YP_001782728.1 )

sugar transferase

NC_010516
(Clostridium botulinum Okra)

1e-18

522) H04402_03169
( YP_005679700.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_017299
(Clostridium botulinum H04402 065)

1e-18

523) CLJ_B3359
( YP_002864101.1 )

sugar transferase family protein

NC_012658
(Clostridium botulinum 657)

1e-18

524) CLB_3122
( YP_001385415.1 )

sugar transferase

NC_009697
(Clostridium botulinum ATCC 19397)

1e-18

525) CBO3093
( YP_001255585.1 )

sugar transferase

NC_009495
(Clostridium botulinum ATCC 3502)

1e-18

526) CLC_2995
( YP_001388822.1 )

sugar transferase

NC_009698
(Clostridium botulinum Hall)

1e-18

527) CLK_2487
( YP_001788414.1 )

sugar transferase

NC_010520
(Clostridium botulinum Loch Maree)

1e-18

528) cpsE2
( YP_007454230.1 )

galactosyl transferase CpsE

NC_020291
(Clostridium saccharoperbutylacetonicum N1-4(HMT))

3e-18

529) Glo7428_0552
( YP_007126308.1 )

Undecaprenyl-phosphate galactose phosphotransferase

NC_019745
(Gloeocapsa sp. PCC 7428)

5e-18

530) B5T_01718
( YP_006820340.1 )

sugar transferase

NC_018691
(Alcanivorax dieselolei B5)

5e-18

531) OEOE_1744
( YP_811253.1 )

lipopolysaccharide synthesis sugar transferase

NC_008528
(Oenococcus oeni PSU-1)

3e-17

532) ACICU_00087
( YP_001844746.1 )

sugar transferase

NC_010611
(Acinetobacter baumannii ACICU)

7e-17

533) A1S_0061
( YP_001083158.1 )

UDP-galactose phosphate transferase

NC_009085
(Acinetobacter baumannii ATCC 17978)

7e-17

534) BJAB0868_00105
( YP_008211432.1 )

Sugar transferases involved in lipopolysaccharide synthesis

NC_021729
(Acinetobacter baumannii BJAB0868)

8e-17

535) LSA_01630
( YP_004840567.1 )

hypothetical protein

NC_015978
(Lactobacillus sanfranciscensis TMW 1.1304)

9e-17

536) rfbP
( YP_004997251.1 )

undecaprenyl-phosphate galactosephosphotransferase

NC_016603
(Acinetobacter calcoaceticus PHEA-2)

2e-16

537) SpiGrapes_1585
( YP_005062402.1 )

glycosyl transferase

NC_016633
(Sphaerochaeta pleomorpha Grapes)

2e-16

538) SAPIG0143
( YP_005732953.1 )

sugar transferase

NC_017333
(Staphylococcus aureus ST398)

2e-16

539) SAT0131_00116
( YP_005751407.1 )

sugar transferase

NC_017347
(Staphylococcus aureus T0131)

2e-16

540) BF638R_1460
( YP_005110543.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_016776
(Bacteroides fragilis 638R)

3e-16

541) wcfS
( YP_211035.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_003228
(Bacteroides fragilis NCTC 9343)

3e-16

542) BF1445
( YP_098730.1 )

undecaprenyl-phosphate galactose phosphotransferase

NC_006347
(Bacteroides fragilis YCH46)

3e-16

543) Oweho_3317
( YP_004990913.1 )

glycosyl transferase

NC_016599
(Owenweeksia hongkongensis DSM 17368)

6e-16

544) FIC_00351
( YP_003094880.1 )

Lipid carrier : UDP-N-acetylgalactosaminyltransferase

NC_013062
(Flavobacteriaceae bacterium 3519-10)

1e-15

545) Echvi_0061
( YP_007222373.1 )

glycosyl transferase

NC_019904
(Echinicola vietnamensis DSM 17526)

2e-15

• Sequence Alignments

1) SSP0070 in NC_007350


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  249 bits (928),  Expect = 9e-68, Method: Compositional matrix adjust.
 Identities = 140/186 (76%), Positives = 172/186 (93%), Gaps = 2/186 (1%)

Query  1    MKRVFDLFTSI-VVLGFLSPFLFLVSIAIKLESKGPIVFKQKRPGINNKIFNIYKFRSMK  59
            MKR+FD+F+S+  ++ FL P+LFLVSIAIK+ESKGPIVFKQ RPG++NK+F+IYKFRSM+
Sbjct  1    MKRIFDIFSSLYAIIIFL-PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  60   VETPDVATDKIDANIYITKSGRFIRKTSIDELPQLFNVIKGDMSVVGPRPALYNQYDLIA  119
             +TP+VATD++D+  YITK+G+FIRKTS+DELPQLFN++KGDM+VVGPRPALYNQY+LI 
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  120  KRTNESVHTVKPGLTGLAQVMGRDDITDDQKVQYDKYYVENQTFILDMFIIYKTIRNTIT  179
            KRTN +VH VKPGLTGLAQVMGRD+ TDDQKVQYDK+YVENQ+F LDM+IIYKTI+NTI+
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  180  SEGVKH  185
            SEGV H
Sbjct  180  SEGVSH  185

2) SLGD_00335 in NC_013893


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  240 bits (896),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 137/185 (75%), Positives = 169/185 (92%), Gaps = 0/185 (0%)

Query  1    MKRAFDLFCSIYGLIVAGPFLLIIALLIKLESPGPAIFKQKRPTLNNELFNIYKFRSMKM  60
            MKR FD+F S+Y++I+  P+L+++++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDPADFITKTGKFIRKTSIDELPQLLNVLKGDMSIVGPRPALYNQYELIEK  120
            DTPNVATD +DPAD+ITKTGKFIRKTS+DELPQL+N+LKGDM++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKVNVHTIRPGVTGLAQVMGRDNNTDDQKVMFDKYYLENQSFLLDMYIIYKTVINTISS  180
            RT+VNVH ++PG+TGLAQVMGRDNNTDDQKV +DK+Y+ENQSF LDMYIIYKT+ NTISS
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVSH  185
            EGVSH
Sbjct  181  EGVSH  185

3) capM in NC_017353


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  240 bits (896),  Expect = 3e-65, Method: Compositional matrix adjust.
 Identities = 137/185 (75%), Positives = 169/185 (92%), Gaps = 0/185 (0%)

Query  1    MKRAFDLFCSIYGLIVAGPFLLIIALLIKLESPGPAIFKQKRPTLNNELFNIYKFRSMKM  60
            MKR FD+F S+Y++I+  P+L+++++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDPADFITKTGKFIRKTSIDELPQLLNVLKGDMSIVGPRPALYNQYELIEK  120
            DTPNVATD +DPAD+ITKTGKFIRKTS+DELPQL+N+LKGDM++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKVNVHTIRPGVTGLAQVMGRDNNTDDQKVMFDKYYLENQSFLLDMYIIYKTVINTISS  180
            RT+VNVH ++PG+TGLAQVMGRDNNTDDQKV +DK+Y+ENQSF LDMYIIYKT+ NTISS
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVSH  185
            EGVSH
Sbjct  181  EGVSH  185

4) SAMSHR1132_01350 in NC_016941


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  238 bits (886),  Expect = 2e-64, Method: Compositional matrix adjust.
 Identities = 128/185 (70%), Positives = 164/185 (89%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILFITALLIKIESPGPAIFKQKRPTVNNKLFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+LF+ ++ IKIES GP +FKQ RP V+NKLF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDRYYLTHQSMMLDMYIIYKTVKNIITS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD++Y+ +QS  LDMYIIYKT+KN I+S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

5) capM in NC_012121


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  235 bits (878),  Expect = 8e-64, Method: Compositional matrix adjust.
 Identities = 142/185 (77%), Positives = 171/185 (93%), Gaps = 0/185 (0%)

Query  1    MKRIFDFLSSLfviiiaapvfviTALAIKAESKGPIIFKQKRPGINNTIFNIYKFRSMKI  60
            MKRIFD++SSL+ III  P++ + ++AIK ESKGPI+FKQ RPG++N +F+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLIDPSTYITKSGKFIRRTSIDELPQLFNILKGDMSVVGPRPALYNQYELIEK  120
            DTPNVATD +DP+ YITK+GKFIR+TS+DELPQLFNILKGDM+VVGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKKDVHLVRPGLTGLAQVMGRDNISDDQKVQYDKYYVDNQTFLLDMFIIYKTIKNTITS  180
            RT+ +VHLV+PGLTGLAQVMGRDN +DDQKVQYDK+YV+NQ+F LDM+IIYKTIKNTI+S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVSH  185
            EGVSH
Sbjct  181  EGVSH  185

6) SAS0136 in NC_002953


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  233 bits (870),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 125/185 (68%), Positives = 163/185 (89%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKVNVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+VNVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

7) cap8M in NC_003923


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  233 bits (870),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 125/185 (68%), Positives = 163/185 (89%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKVNVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+VNVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

8) capM1 in NC_022222


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  233 bits (868),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESSGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

9) capM in NC_017349


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  233 bits (868),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 125/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKIESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IKIES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

10) M013TW_0151 in NC_016928


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  233 bits (868),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESSGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

11) capM in NC_022443


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  233 bits (868),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESSGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

12) capM in NC_022442


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  233 bits (868),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESSGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

13) capM in NC_017340


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

14) capM in NC_018608


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

15) MS7_0155 in NC_017351


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

16) SAAG_00644 in NC_022113


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTAYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

17) ST398NM01_0175 in NC_017673


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

18) SABB_01680 in NC_021670


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTAYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

19) CA347_173 in NC_021554


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTVKNIITS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKT+KN I+S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

20) SAKOR_00141 in NC_022226


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

21) cap5M in NC_002951


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

22) ECTR2_118 in NC_017343


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

23) SAOV_0108 in NC_017337


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

24) cap5M in NC_013450


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

25) capM in NC_017763


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

26) SaurJH1_0152 in NC_009632


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

27) SaurJH9_0147 in NC_009487


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

28) cap5M in NC_017341


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTAYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

29) cap5M in NC_017338


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

30) BN843_1670 in NC_021059


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

31) capM in NC_002952


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTAYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

32) capM in NC_009782


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

33) capM in NC_002758


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

34) capM in NC_002745


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

35) SAOUHSC_00126 in NC_007795


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

36) capM in NC_009641


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

37) capM in NC_007622


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

38) capM in NC_020529


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

39) capM in NC_020564


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

40) capM in NC_020532


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

41) capM in NC_020533


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

42) capM in NC_020537


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

43) SAPIG0175 in NC_017333


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

44) pbpC in NC_017347


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTAYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

45) cap5M in NC_017342


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTAYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

46) capM in NC_017331


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTAYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

47) capM in NC_020566


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

48) capM in NC_020536


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

49) capM in NC_020568


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

50) cap5M in NC_007793


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

51) cap5M in NC_010079


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

52) SAVC_00575 in NC_016912


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  232 bits (865),  Expect = 9e-63, Method: Compositional matrix adjust.
 Identities = 124/185 (68%), Positives = 162/185 (88%), Gaps = 0/185 (0%)

Query  1    MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKI  60
            MKR+FD+ SS+Y+++++ P+L++ ++ IK+ES GP +FKQ RP ++N LF+IYKFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEK  120
            DTPNVATD +D++ YITKTGK IRKTS+DELPQL+N+LKG+M++VGPRPALYNQYELIEK
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  RTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTS  180
            RT+ NVH ++PG+TGLAQVMGRD+ TDDQKV YD +Y+ +QS  LDMYIIYKTIKN ++S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  181  EGVHH  185
            EGV H
Sbjct  181  EGVSH  185

53) MCCL_0678 in NC_011999


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  208 bits (774),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 113/186 (61%), Positives = 156/186 (84%), Gaps = 1/186 (0%)

Query  2    IKRSFDFVSASAGILALSPIMIVTALAIKNNSRGPILFKQQRPGLNNELFTIYKFRSMAV  61
            +KR FD+ S+  +I+ + P++++ ++AIK +S+GPI+FKQ+RPG++N LF IYKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  62   DTPNVETAKLGDGTTYITSVGKFIRKTSIDELPQLINVVKGEMSVVGPRPALFNQYELIQ  121
            DTPNV T +L D + YIT  GKFIRKTS+DELPQL+N++KG+M+VVGPRPAL+NQYELI+
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  122  KRTELGIHKLKPGITGYAQVMGRDEISDDEKVQYDKYYLDNQSFMLDMWIIFKTISNVIA  181
            KRT++ +H +KPG+TG AQVMGRD+ +DD+KVQYDK+Y++NQSF LDM II+KTI N I+
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  182  QKNITH  187
               ++H
Sbjct  180  SEGVSH  185

54) Clocl_4198 in NC_016627


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  164 bits (605),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 95/185 (52%), Positives = 139/185 (76%), Gaps = 2/185 (1%)

Query  6    IKRLMDITLSLIAVIVLAPLFIIITVAIKIDSQGPVFFKQKRVGIHKKHFNILKFRTMRI  65
            +KR+ DI  SL A+I++ PL++++++AIKI+S+GP+ FKQ R G+ +K F+I KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DTPKETPTHLLENPEQWITRVGKFLRKTSLDELPQLFNILKGEMSIIGPRPALWNQYDLI  125
            DTP+ +  +L  +P + IT+ GKF+RKTSLDELPQLFNILKG+M+++GPRPAL NQY+LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  126  EERDKYGANDVPVGLTGWAQVNGRDELSIEEKAKLDGEYAKKISFIMDLKCFFRTIVSVI  185
            E R +   + V  GLTG AQV GRD+ + ++K + D  Y  + SF +D+  +++TI + I
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  186  RSEGV  190
             SEGV
Sbjct  179  SSEGV  183

55) Ppro_3388 in NC_008609


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  159 bits (587),  Expect = 9e-41, Method: Compositional matrix adjust.
 Identities = 92/186 (50%), Positives = 137/186 (74%), Gaps = 1/186 (0%)

Query  1    MKRLLDFCISLFAMFLFSIPMLLVALAVKLTSPGPVLYWSDRVGRNNAIFKMPKFRTMRT  60
            MKR++D+  SL+A+++F   ++LV++A+K+ S GP+++  DR G +N +FK+ KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPAVATHLLGDPDQWLTPVGRFLRTSSLDELPQLWSILAGNMSFVGPRPALYNQDDLIA  120
            DTP VAT+ L DP + +T  G+F+R +SLDELPQL +IL G+M+ VGPRPALYNQ +LI 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  LRTKKGVHMLTPGLTGWAQINGRDELPIPVKVDFDEYYLRHRSFSLDMRILLLTFSKVAK  180
             RT+  VH++ PGLTG AQ+ GRD+     KV++D +Y+ ++SF LDM I+  T+ +   
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  REGVTH  186
             EGV+H
Sbjct  180  SEGVSH  185

56) Ppha_0569 in NC_011060


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  155 bits (570),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 93/187 (50%), Positives = 143/187 (77%), Gaps = 3/187 (1%)

Query  1    MKRLFDITMSLLALLVFGMPML-IVALFIKLTSRGPVLYWSDRVGKNNALFRMPKFRTML  59
            MKR+FDI  SL A+++F +P+L +V++ IK+ S+GP+++  DR G +N LF++ KFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIF-LPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  60   VETPAVATHLMSDPDRFLTPIGKFLRKTSIDELPQLWSILIGDMSIVGPRPALFNQDDLI  119
             +TP VAT+ + DP  ++T  GKF+RKTS+DELPQL +IL GDM++VGPRPAL+NQ +LI
Sbjct  60   QDTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  120  ALRTEKGVHILTPGLSGPAQINGRDELPIPVKVEFDEYYLKNRSFLFDLKIIVQTIFKAV  179
              RT+  VH++ PGL+G AQ+ GRD+     KV++D +Y+ N+SF +D+ II +TI +++
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  180  KGDGVTH  186
             ++GV+H
Sbjct  179  SSEGVSH  185

57) M7W_1030 in NC_020207


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  154 bits (569),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 96/185 (52%), Positives = 139/185 (76%), Gaps = 2/185 (1%)

Query  6    LKRGIDFLLSLVGIIVLSPILLILCIAIKIDSKGPVIFKQKRVGKNKSHFYIYKFRTMKV  65
            +KR +D++ SL +II++ P+L+++ IAIKI+SKGP++FKQ R G ++  F IYKFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DTPQETPTHLLSNPDFFITRVGKFLRKTSLDELPQLFNILKGDMAVIGPRPALWNQYDLI  125
            DTP+ +  +L  +P  +IT+ GKF+RKTSLDELPQLFNILKGDMAV+GPRPAL NQY+LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  126  EERDKYHANDIRPGLTGLAQISGRDELEIDYKARLDGQYTANITPWMDLKCFFGTIISVF  185
            E R + + + ++PGLTGLAQ+ GRD+   D K + D  Y  N +  +D+  ++ TI + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  186  KSDGV  190
             S+GV
Sbjct  179  SSEGV  183

58) RTCIAT899_CH18225 in NC_020059


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  154 bits (569),  Expect = 2e-39, Method: Compositional matrix adjust.
 Identities = 91/185 (50%), Positives = 137/185 (75%), Gaps = 1/185 (0%)

Query  7    KRLFDFLAALAATIVFFIPVLIVALAVRLTSPGPILYWSDRVGRKNRIFRMPKFRSMRTD  66
            KR+FD++++L A I+F+  +++V++A+++ S GPI++  DR G KN++F++ KFRSMR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   TPAVATHLLKDPDIYLTPIGSFLRKSSLDELPQLWCILKGEMSIVGPRPALFNQHDLVAL  126
            TP VAT+ L DP  Y+T  G F+RK+SLDELPQL  ILKG+M++VGPRPAL+NQ +L+  
Sbjct  62   TPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  127  RTQRGVDALLPGLTGWAQVNGRDELPIPEKVALDEDYLRRRSFLFDLKIIFLTVLKVVRR  186
            RT+  V+ + PGLTG AQV GRD+    +KV  D  Y+  +SF +D+ II+ T+ + +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  187  DGVAH  191
            +GV+H
Sbjct  181  EGVSH  185

59) Plim_0633 in NC_014148


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  153 bits (565),  Expect = 5e-39, Method: Compositional matrix adjust.
 Identities = 88/186 (48%), Positives = 128/186 (69%), Gaps = 1/186 (0%)

Query  1    MKRAFDVVLALSAGMVLLPLMMAIACVVRLTSRGPALYWSNRVGQNNEIFPMPKFRSMRI  60
            MKR FD+  +L A +++LPL+  ++  +++ S+GP ++  +R G +N +F + KFRSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPVVATHLLTDSRSWITPVGHFLRKTSLDELPQLWSILRGDMSFVGPRPALFNQDDLVA  120
            DTP VAT+ L D+   IT  G F+RKTSLDELPQL +IL+GDM+ VGPRPAL+NQ +L+ 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  ARTAERVHLLRPGLTGWAQINGRDELSIPEKVALDAEYARRQSLWFDLQILWMTSIKVLR  180
             RT   VHL++PGLTG AQ+ GRD+ +  +KV  D  Y   QS+ +D+ I+  T  + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  REGVRQ  186
             EGV +
Sbjct  180  SEGVSH  185

60) SSA_2220 in NC_009009


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  153 bits (563),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 93/184 (51%), Positives = 136/184 (74%), Gaps = 2/184 (1%)

Query  6    KRTLDIVLSFIGMIVLSPFFLLLVLAIKLDSKGPVLFKQKRVGLHKKHFYILKFRTMRID  65
            KR +DI  S+ ++I++ P+++L+ +AIK++SKGP++FKQ R G+ +K F I KFR+MR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  66   TPKDTPTHLLENPEQWITKVGKFLRKTSLDELPQIWNIFVGDMSIIGPRPALWNQYDLIE  125
            TP+ +  +L  +P + ITK GKF+RKTSLDELPQ+ NI+ GDM+++GPRPAL NQY+LIE
Sbjct  62   TPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  126  ERDRYGANDVLPGLTGWAQIHGRDELPIGKKAELDGYYVQHLSFGLDVRCFFGTIKSVAK  185
             R     + V PGLTG AQ+ GRD+   ++K + D +YV++ SF LD+  ++ TIK+   
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  186  SEGV  189
            SEGV
Sbjct  180  SEGV  183

61) Gbem_1626 in NC_011146


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  152 bits (560),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 94/187 (51%), Positives = 137/187 (74%), Gaps = 3/187 (1%)

Query  1    MKRTFDFVLSFLLLACLGVPML-LIALLVKLTSPGPVLYWSDRVGRCNVIFRMPKFRSMR  59
            MKR FD ++S L    + +P+L L+++ +K+ S GP+++  DR G  N +F++ KFRSMR
Sbjct  1    MKRIFD-IFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  60   VDTPAVATHLLTNPDQFLTPIGKFLRKSSLDELPQLLSILTGNMSFVGPRPALFNQDDLI  119
             DTP VAT+ L +P +++T  GKF+RK+SLDELPQL++IL G+M+ VGPRPAL+NQ +LI
Sbjct  60   QDTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  120  ELRTRKGVHLITPGLTGWAQVNGRDELLIPVKVEFDSYYVQNSSFLFDLRIIFLTLVKVL  179
            E RT   VHL+ PGLTG AQV GRD+     KV++D +YV+N SF +D+ II+ T+ + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  180  KTDGVQH  186
             ++GV H
Sbjct  179  SSEGVSH  185

62) SGO_2023 in NC_009785


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 87/176 (50%), Positives = 130/176 (74%), Gaps = 2/176 (1%)

Query  5    IKRSLDIFLSLVGMVSLSPFILILIIVIKLDSKGPVLFKQKRIGIHKKTFQILKFRTMRI  64
            +KR +DIF SL +++ + P+++++ I IK++SKGP++FKQ R G+ +K F+I KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   DTPKDTPTHLLENPEQWITKVGKFLRKTSLDELPQIWNIFVGDMSIIGPRPALWNQYDLI  124
            DTP+ +  +L  +P + ITK GKF+RKTSLDELPQ+ NI+ GDM+++GPRPAL NQY+LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  125  AERDRYGANDVLPGLTGWAQIHGRDELPIEKKAELDGYYVKHMSFRLDLRCFFGTI  180
              R     + V PGLTG AQ+ GRD+   ++K + D +YV + SF+LD+  ++ TI
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

63) PHZ_c1136 in NC_011144


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  152 bits (561),  Expect = 9e-39, Method: Compositional matrix adjust.
 Identities = 85/186 (46%), Positives = 138/186 (75%), Gaps = 1/186 (0%)

Query  2    LKRAFDIAASLAGLVALSPVLLAIAAAVRLDSPGPAVHWSRRVGRNNRVFRMPKFRTMRI  61
            +KR FDI +SL +++ + P+L+ ++ A++++S GP V    R G +N++F++ KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  62   DTPDVATHLLDRPEQWITPLGRFLRRTSLDELPQLWSVLTGEMSLVGPRPALFNQDDLVA  121
            DTP+VAT+ LD P + IT  G+F+R+TSLDELPQL ++L G+M++VGPRPAL+NQ +L+ 
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  122  LRTEAGVERLRPGVTGWAQINGRDELPIPEKVRLDREYLERMSLAFDLRILVATVLAAFS  181
             RT+  V+ ++PG+TG AQ+ GRD+    +KV+ D+ Y+E  S+ +D+ I+  T+  ++S
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  182  GRGVSH  187
            + GVSH
Sbjct  180  SEGVSH  185

64) Cpha266_2615 in NC_008639


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  151 bits (558),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 95/187 (51%), Positives = 143/187 (77%), Gaps = 3/187 (1%)

Query  3    MKRLFDITMSLLAFFVFGFPML-VVALFIKLTSKGPVLYWSDRVGKNNAIFRMPKFRTML  61
            MKR+FDI  SL A+++F +P+L +V++ IK+ SKGP+++  DR G +N +F++ KFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIF-LPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  62   VDTPAVATHLMLDPDRFLTPIGKFLRKTSIDELPQLWSILIGDMSIVGPRPALFNQDDLI  121
             DTP VAT+  LDP  ++T  GKF+RKTS+DELPQL +IL GDM++VGPRPAL+NQ +LI
Sbjct  60   QDTPNVATD-RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  ALRTEKGVHILTPGLSGPAQINGRDELPIPVKVEFDEYYLKNRSFLFDLKIIVQTIFKAV  181
              RT+  VH++ PGL+G AQ+ GRD+     KV++D +Y+ N+SF +D+ II +TI +++
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  182  KGDGVTH  188
             ++GV+H
Sbjct  179  SSEGVSH  185

65) CYCME_0462 in NC_021917


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  150 bits (552),  Expect = 5e-38, Method: Compositional matrix adjust.
 Identities = 93/186 (50%), Positives = 134/186 (73%), Gaps = 1/186 (0%)

Query  1    MKRLFDLFLAINAAAVLLVPICIVAILVRVTSKGPALYWSDRVGINNTIFKMPKFRSMKT  60
            MKR+FD+F ++ A  ++L  + +V+I +++ SKGP ++  DR G++N +FK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPAVATHLLKDPKSVLTPIGDLLRKTSLDELPQLWCILKGDMSFVGPRPALFNQDDLIA  120
            DTP VAT+ L DP   +T  G ++RKTSLDELPQL  ILKGDM+ VGPRPAL+NQ +LI 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  LRTEKGVHQLVAGLTGWAQVNGRDELPISQKVELDVEYMHRRSFLFDIYILWLTFLKVLK  180
             RT+  VH + +GLTG AQV GRD+    QKV+ D  Y++ +SF +D+YI+  T+ + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  RDGVSH  186
             +GVSH
Sbjct  180  SEGVSH  185

66) FPR_28840 in NC_021020


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  149 bits (548),  Expect = 1e-37, Method: Compositional matrix adjust.
 Identities = 91/185 (50%), Positives = 132/185 (72%), Gaps = 2/185 (1%)

Query  6    IKRLLDILLSACGIlclswlllllAVAIKLDSPGPVFFRQKRVGIGKRHFQILKFRTMRI  65
            +KR++DI+ S  +I+ +  LL+L+++AIK++S GP+ F+Q R G+ ++ F+I KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DTPHDMPTHLLHDPEQYITRMGHFLRKTSLDELPQLWNILVGDMAVIGPRPALWNQYDLL  125
            DTP+    +L  DP +YIT+ G F+RKTSLDELPQL NIL GDMAV+GPRPAL NQY+L+
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  126  AERDKYGANDVRPGLTGWAQIHGRDELEITEKAKLDGWYVEHISFGLDVKCFFGTITAVL  185
              R +   + V+PGLTG AQ+ GRD+    +K + D  YVE+ SF LD+  ++ TI   +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  186  KHDGV  190
              +GV
Sbjct  179  SSEGV  183

67) ELI_2701 in NC_014624


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  149 bits (550),  Expect = 7e-38, Method: Compositional matrix adjust.
 Identities = 93/187 (50%), Positives = 138/187 (74%), Gaps = 2/187 (1%)

Query  7    IKRILDFSLSTVGLVILSPVYGVLIIAIKADSKGPILFKQRRVGIHKQLFNIYKFRTMSI  66
            +KRI+D+  S  +++I+ P+  ++ IAIK +SKGPI+FKQ R G+ ++LF+IYKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  67   DTPKDTPTHMLKNPDQYITKVGKFLRKTSLDELPQIFNIIKGEMSIIGPRPALWNQEDLI  126
            DTP+ +  ++  +P +YITK GKF+RKTSLDELPQ+FNI+KG+M+++GPRPAL NQ +LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  127  AERDQYGANDVRPGLTGLAQISGRDELKIPIKAKLDGQYVKNISFPFDCKMFFKTITSVL  186
              R +   + V+PGLTGLAQ+ GRD+     K + D  YV N SF +D  +++KTI + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  187  KNEGVQE  193
             +EGV +
Sbjct  179  SSEGVSH  185

68) GM21_2587 in NC_012918


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 89/176 (51%), Positives = 130/176 (74%), Gaps = 5/176 (2%)

Query  11   VVLLALCSVPMLLVGLLVKLTSPGPVLYWSDRVGVNNTIFRMPKFRTMLIDTPAVATHLL  70
            +++L+L    ++LV++ +K+ S GP+++  DR GV+N +F++ KFR+M  DTP VAT+ L
Sbjct  15   IIFLPL----LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL  70

Query  71   TDPDRFLTPIGKFLRKSSLDELPQLFSILRGDMSFVGPRPALYNQDDLIKLRTEKGVHVL  130
             DP  ++T  GKF+RK+SLDELPQLF+IL+GDM+ VGPRPALYNQ +LI  RT+  VH++
Sbjct  71   -DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLV  129

Query  131  PPGLTGWAQINGRDELPIPVKVDFDEHYLKNRSMALDIRIIFLTALKVLKSDGVSH  186
             PGLTG AQ+ GRD+     KV++D  Y+ N+S  LD+ II+ T  + + S+GVSH
Sbjct  130  KPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

69) BH3716 in NC_002570


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  148 bits (545),  Expect = 2e-37, Method: Compositional matrix adjust.
 Identities = 87/185 (48%), Positives = 136/185 (74%), Gaps = 2/185 (1%)

Query  5    LKRLIDLVLSFIGMIVLSPIFLLLIIGIKLDSKGPVLFKQKRVGINKTHFHILKFRTMRI  64
            +KR++D+  S+ ++I++ P+++L+ I+IK++SKGP++FKQ R G+++  F I KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   DTPKDTPTHLLKNPDQYITKMGKFLRKTSLDELPQIWNIFVGHMSIIGPRPALWNQYDLI  124
            DTP+ +  +L  +P +YITK GKF+RKTSLDELPQ+ NI+ G+M+++GPRPAL NQY+LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  125  VERDKYGANDVPPGLTGWAQINGRDELPIEVKAKLDGEYVQNIGFWMDVKCFVGTIWSVL  184
              R +   + V PGLTG AQ+ GRD+   + K + D  YV+N +F +D+  +  TI + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  185  RSDGV  189
             S+GV
Sbjct  179  SSEGV  183

70) Daro_1277 in NC_007298


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  147 bits (542),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 93/186 (50%), Positives = 130/186 (70%), Gaps = 1/186 (0%)

Query  1    MKRLFDLVLALAAVCIFAIPLAVVALLVKATSPGPILYWSDRVGRHNRIFRMPKFRSMRV  60
            MKR+FD+  +L A+ IF   L +V++ +K  S GPI++  DR G  N++F++ KFRSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   GTPAVATHLLNNPATHLTPIGSFLRRSSLDELPQVWSILVGDMSFVGPRPALFNQDDLVA  120
            +TP VAT+ L+ PA  +T  G F+R++SLDELPQ+ +IL GDM+ VGPRPAL+NQ +L+ 
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  LRTEAGVHELQPGLTGWAQVNGRDELPIPQKVALDVEYLRRQSFWFDLRIIWLTALKVVR  180
             RT+  VH ++PGLTG AQV GRD+    QKV  D  Y+  QSF +D+ II  T  + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  SDGVSH  186
            S+GVSH
Sbjct  180  SEGVSH  185

71) ELI_1967 in NC_014624


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  147 bits (542),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 91/187 (49%), Positives = 137/187 (74%), Gaps = 2/187 (1%)

Query  7    IKRILDFSLSTVGLVILSPIYGILVIAIKADSKGPILFKQKRVGIHKQHFNIYKFRTMSI  66
            +KRI+D+  S  +++I+ P+  ++ IAIK +SKGPI+FKQ R G+ ++ F+IYKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  67   DTPKDTPTHMLKNPDQYITKVGRFLRKTSLDELPQIFNIIKGEMSIIGPRPALWNQEDLI  126
            DTP+ +  ++  +P +YITK G+F+RKTSLDELPQ+FNI+KG+M+++GPRPAL NQ +LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  127  AERDQYGANDVRPGLTGLAQISGRDELEIPIKAKLDGQYVKNISFPFDCKMFFKTITSVL  186
              R +   + V+PGLTGLAQ+ GRD+     K + D  YV N SF +D  +++KTI + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  187  KNEGVQE  193
             +EGV +
Sbjct  179  SSEGVSH  185

72) SP70585_0417 in NC_012468


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  147 bits (541),  Expect = 3e-37, Method: Compositional matrix adjust.
 Identities = 89/185 (49%), Positives = 133/185 (72%), Gaps = 2/185 (1%)

Query  5    LKRLGDISISLIVITLFCPFFILIAIAIKFDSKGPVIFKQKRFGIHKKTFYVFKFRTMKV  64
            +KR+ DI  SL  I +F P+++L++IAIK++SKGP++FKQ R G+ +K F ++KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   ETPKNVATRDLQNPEQWITRVGTFLRKTSLDELPQLCNILVGDMSIVGPRPALWNQFDLI  124
            +TP+  + R   +P + IT+ G F+RKTSLDELPQL NIL GDM++VGPRPAL NQ++LI
Sbjct  61   DTPNVATDR--LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  125  EERDKYGANDILPGLTGWAQINGRDNLSIDMKAELDGYYVTHKSLLMDIRCIVRTIPYVL  184
            E R +   + + PGLTG AQ+ GRDN + D K + D +YV ++S+ +D+  I +TI   +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  185  KRKGI  189
               G+
Sbjct  179  SSEGV  183

73) SUB1038 in NC_012004


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  146 bits (537),  Expect = 7e-37, Method: Compositional matrix adjust.
 Identities = 88/167 (53%), Positives = 126/167 (76%), Gaps = 2/167 (1%)

Query  23   PVLLAVAIAIKCDSKGPVLFKQKRVGKDKQHFMIYKFRSMYVDAPADMPTHMLKDPTAMI  82
            P+L+ V+IAIK +SKGP++FKQ R G  ++ F IYKFRSM  D+P +++T+ L DP+  I
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYI  76

Query  83   TKVGAFLRKTSLDELPQLFNIFKGEMAIVGPRPALWNQYDLIAERDKYNANSIRPGLTGW  142
            TK G F+RKTSLDELPQLFNI+KG+MA+VGPRPAL NQY+LI  R + N + ++PGLTG 
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  143  AQINGRDELEIEEKSRLDGYYVAHMSFLMDLKCFFGTFISVLKSDGV  189
            AQ+ GRD+   ++K + D +YV + SF +D+  ++ T+ + + S+GV
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

74) FSU_3254 in NC_017448


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  145 bits (533),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 92/184 (50%), Positives = 131/184 (72%), Gaps = 2/184 (1%)

Query  11   KRLFDIVLSGFGIIVLAIPMLVIAIAIKLDSKGPVLFKQKRVGLHKKHFNIYKFRTMRTD  70
            KR+FDI  S ++II++   +++++IAIK++SKGP++FKQ R G+ +K F+IYKFR+MR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  71   TPKDAPTHELSDPKKWITKVGGFLRKTSLDELPQMFNIFEGTMSIIGPRPALWNQYDLIE  130
            TP + +T+ L DP   ITK G F+RKTSLDELPQ+FNI+ G M+++GPRPAL NQY+LIE
Sbjct  62   TP-NVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  131  ERDKYGANDVPVGLTGWAQINGRDELEIPVKAALDGEYVKRQSFLFDCKCFFGTFISVLK  190
             R +   + V  GLTG AQ+ GRD+     K   D  YV  QSF +D   ++ T+ + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  191  SDGV  194
            S+GV
Sbjct  180  SEGV  183

75) Fisuc_2686 in NC_013410


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  145 bits (533),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 92/184 (50%), Positives = 131/184 (72%), Gaps = 2/184 (1%)

Query  11   KRLFDIVLSGFGIIVLAIPMLVIAIAIKLDSKGPVLFKQKRVGLHKKHFNIYKFRTMRTD  70
            KR+FDI  S ++II++   +++++IAIK++SKGP++FKQ R G+ +K F+IYKFR+MR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  71   TPKDAPTHELSDPKKWITKVGGFLRKTSLDELPQMFNIFEGTMSIIGPRPALWNQYDLIE  130
            TP + +T+ L DP   ITK G F+RKTSLDELPQ+FNI+ G M+++GPRPAL NQY+LIE
Sbjct  62   TP-NVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  131  ERDKYGANDVPVGLTGWAQINGRDELEIPVKAALDGEYVKRQSFLFDCKCFFGTFISVLK  190
             R +   + V  GLTG AQ+ GRD+     K   D  YV  QSF +D   ++ T+ + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  191  SDGV  194
            S+GV
Sbjct  180  SEGV  183

76) HEAR1150 in NC_009138


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  145 bits (532),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 91/186 (49%), Positives = 135/186 (73%), Gaps = 1/186 (0%)

Query  1    MKRTFDLTLAILASFVLLVPIGLVSLFVKLTSQGPIVYWSDRVGRGNKIFKMPKFRTMQI  60
            MKR FD+  ++ A +++L  + LVS+ +K+ S+GPIV+  DR G  NK+FK+ KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPAVATHLLSNPEQFLTPIGSFLRRSSLDELPQLWSILRGDMSFVGPRPALFNQDDLIA  120
            DTP VAT+ L +P +++T  G F+R++SLDELPQL +IL+GDM+ VGPRPAL+NQ +LI 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  LRTRYGVDQVTPGLTGWAQINGRDELPIPEKVQLDVEYMQRQSFWFDLKIIFLTFLKVLK  180
             RT   V+ V PGLTG AQ+ GRD+    +KVQ D  Y++ QSF +D+ II+ T+ + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  KDGITH  186
             +G++H
Sbjct  180  SEGVSH  185

77) TEH_03940 in NC_016052


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  144 bits (531),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 87/157 (56%), Positives = 116/157 (74%), Gaps = 2/157 (1%)

Query  34   KIDSKGPIIFKQKRVGKNKKYFNIYKFRTMKSETPKEMPTHLLNNPDAFITKAGKFLRKT  93
            KI+SKGPI+FKQ R G ++K F+IYKFR+M+ +TP+    +L  +P  +ITK+GKF+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKTGKFIRKT  86

Query  94   SLDELPQLFNILKGDMAVIGPRPALWNQYDLIAERDKYGVNEAQPGLTGLAQISGRDELE  153
            SLDELPQLFNILKGDMAV+GPRPAL NQY+LI  R +  V+  +PGLTGLAQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  154  IPVKAQIDGKYTNNISFVMDLKCFVGTVLSIVKSDGV  190
               K Q D  Y +N SF +D+  +  T+ + + S+GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

78) Despr_3184 in NC_014972


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  144 bits (531),  Expect = 2e-36, Method: Compositional matrix adjust.
 Identities = 84/159 (53%), Positives = 119/159 (75%), Gaps = 1/159 (0%)

Query  28   IKLTSKGPVLYWSDRVGRDNALFKMPKFRTMQVNTPVVATHLLENPDHYLTVIGKFLRKS  87
            IK+ SKGP+++  DR G  N LFK+ KFR+M+ +TP VAT+ L+ P +Y+T  GKF+RK+
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKT  86

Query  88   SLDELPQLFSIIKGDMSFVGPRPALFNQDDLIELRTRKGIHRLTPGLTGWAQINGRDDLP  147
            SLDELPQLF+I+KGDM+ VGPRPAL+NQ +LIE RT   +H + PGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  148  IPVKVGYDEYYLQHRSLLLDLHILFRTFVKVARQEGVVH  186
               KV YD +Y++++S+ LD+ I+++T+ +    EGV H
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

79) K710_0837 in NC_021314


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  144 bits (530),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 90/167 (54%), Positives = 120/167 (72%), Gaps = 2/167 (1%)

Query  23   PLLAIVAIAIKIDSKGPILFKQKRLGKDNSHFMIYKFRSMYVDAPAEMPTHLLKDPSAMI  82
            PLL +V+IAIKI+SKGPI+FKQ R G  N  F IYKFRSM  D+P     +L  DP+  I
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYI  76

Query  83   TKVGAFLRKTSLDELPQLFNIFKGEMAIVGPRPALWNQFDLIAERDKNMVNSIRPGLTGW  142
            TK G F+RKTSLDELPQLFNI+KG+MA+VGPRPAL NQ++LI  R +  V+ ++PGLTG 
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  143  AQINGRDELEIADKVALDAYYYKHLSFIFDLKCFFGTFVSVLKSDGV  189
            AQ+ GRD+    +KV  D +Y  + SF +D+  ++ T+ + + S+GV
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

80) capM in NC_005363


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  144 bits (528),  Expect = 4e-36, Method: Compositional matrix adjust.
 Identities = 95/186 (52%), Positives = 135/186 (73%), Gaps = 1/186 (0%)

Query  2    IKRIFDLALCIIAFAIFGIPLLLVYAAVKLTSKGPALHWSKRVGRDNKIFLMPKFRSMMV  61
            +KRIFD+   + A+ IF   L+LV  A+K+ SKGP +    R G  NK+F + KFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  62   DTPQVATHLLADPKKYLTPIGGLIRKTSLDELPQLLSVLTGDMSFVGPRPALFNQDDLVA  121
            DTP+VAT+ L DP  Y+T  G +IRKTSLDELPQL+++L GDM+ VGPRPAL+NQ +L+ 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  122  LRTQYGVEKLKPGITGWAQVNGRDELPIPVKVEFDKYYLDNKSITLDIKILFMTVLKVMR  181
             RT+  V+ +KPG+TG AQV GRD+     KV++DK+Y++N+S+ LD+ I++ T+ + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  182  SDGVSH  187
            S+GVSH
Sbjct  180  SEGVSH  185

81) Thexy_1808 in NC_015555


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  143 bits (527),  Expect = 5e-36, Method: Compositional matrix adjust.
 Identities = 83/155 (54%), Positives = 118/155 (77%), Gaps = 2/155 (1%)

Query  36   DSKGPVLFKQKRVGIHKSYFNILKFRTMRVDTPKDIPTHMLENPDQWITNVGKFLRKTSL  95
            +SKGP++FKQ R G+ +  F+I KFR+MR DTP +++T+ L+ P + IT+ GKF+RKTSL
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRLD-PADYITKTGKFIRKTSL  88

Query  96   DELPQMINILKGEMSIIGPRPALWNQYDLIEERDKYGANDIRPGLTGWAQINGRDELPIE  155
            DELPQ++NILKG+M+++GPRPAL NQY+LIE R +   + ++PGLTG AQ+ GRD+   +
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  156  IKAQLDGEYVEKLSFWMDVKCFFKTIINVIKSDGV  190
             K Q D  YVE+ SF +D+  ++KTI N I S+GV
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

82) SpiBuddy_0254 in NC_015152


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  141 bits (517),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 83/171 (49%), Positives = 128/171 (75%), Gaps = 2/171 (1%)

Query  20   IVLSPLFLVIIILIKLDSKGPVLFKQKRVGIHKTHFYILKLRTMSIDTPNDVPTHQLKNP  79
            I++ PL++++ I IK++SKGP++FKQ R G+ +  F I K+R+M  DTPN V+T++L +P
Sbjct  15   IIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPN-VATDRL-DP  72

Query  80   QQYITRVGKVLRKTSLDELPQIFNILAGQMSIIGPRPALWNQYDLIAERDKYGANDVRPG  139
             +YIT+ GK +RKTSLDELPQ+FNIL G+M+++GPRPAL NQY+LI  R +   + V+PG
Sbjct  73   ADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPG  132

Query  140  LSGWAQINGRDALEIVDKAWFDGEYVQKVGFRMDVKCFFKTIFNVLNHDGV  190
            L+G AQ+ GRD     +K  +D  YV++ +F++D+  ++KTI N ++ +GV
Sbjct  133  LTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

83) SII_1749 in NC_022237


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  141 bits (517),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 84/176 (48%), Positives = 131/176 (75%), Gaps = 2/176 (1%)

Query  5    IKRFLDIILSFCGMLILSPVFLILIVAIKLDSKGPVLFKQKRVGLHKQYFYILKFRTMRI  64
            +KR++DI+ S+ +++I+ P+++++ +AIK++SKGP++FKQ R G+ ++ F I KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   DTPKDTPTHLLANPEQWITKIGKILRKTSLDELPQIWNIFVGDMSIIGPRPALWNQYDLI  124
            DTP+ +  +L  +P + ITK GK++RKTSLDELPQ+ NI+ GDM+++GPRPAL NQY+LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  125  EERDKYGANDILPGLTGWAQINGRDELPIYEKASLDGYYVKHMSFLLDLHCFFGTI  180
            E R +   + + PGLTG AQ+ GRD+    +K   D +YV + SF LD+  ++ TI
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

84) SCIM_1577 in NC_018073


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  141 bits (517),  Expect = 3e-35, Method: Compositional matrix adjust.
 Identities = 84/176 (48%), Positives = 131/176 (75%), Gaps = 2/176 (1%)

Query  5    IKRFLDIILSFCGMLILSPVFLILIVAIKLDSKGPVLFKQKRVGLHKQYFYILKFRTMRI  64
            +KR++DI+ S+ +++I+ P+++++ +AIK++SKGP++FKQ R G+ ++ F I KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   DTPKDTPTHLLANPEQWITKIGKILRKTSLDELPQIWNIFVGDMSIIGPRPALWNQYDLI  124
            DTP+ +  +L  +P + ITK GK++RKTSLDELPQ+ NI+ GDM+++GPRPAL NQY+LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  125  EERDKYGANDILPGLTGWAQINGRDELPIYEKASLDGYYVKHMSFLLDLHCFFGTI  180
            E R +   + + PGLTG AQ+ GRD+    +K   D +YV + SF LD+  ++ TI
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

85) FP2_19210 in NC_021042


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  140 bits (514),  Expect = 5e-35, Method: Compositional matrix adjust.
 Identities = 80/155 (52%), Positives = 107/155 (70%), Gaps = 2/155 (1%)

Query  36   DSPGPVFFKQKRVGIHKSYFDILKFRTMRIDTPHDMPTHLLHDPEQYITRVGRFLRKTSL  95
            +S GP+ FKQ R G+ +  F I KFR+MR DTP+    +L  DP +YIT+ G+F+RKTSL
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKTGKFIRKTSL  88

Query  96   DELPQLWNILVGDMAVIGPRPALWNQYDLLAERDKYGANDVRPGLTGWAQIHGRDELEIT  155
            DELPQL NIL GDMAV+GPRPAL NQY+L+  R +   + V+PGLTG AQ+ GRD+    
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  156  EKAKLDGWYVEHMSFWLDVKCFFGTIRAVADHDGV  190
            +K + D  YVE+ SF LD+  ++ TI+     +GV
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

86) Hsero_4221 in NC_014323


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  140 bits (513),  Expect = 6e-35, Method: Compositional matrix adjust.
 Identities = 89/186 (48%), Positives = 134/186 (73%), Gaps = 1/186 (0%)

Query  1    MKRLFDFavalvasvllaIPIVMVMLAVRLTSPGPALYWSERVGRHNRIFKMPKFRSMRI  60
            MKR+FD+  +L A +++   + +V +A+++ S GP ++  +R G  N++FK+ KFRSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPAVATHLLEDPAQWLTPIGSFLRKSSLDELPQLWSILRGDMSLVGPRPALFNQDDLIT  120
            DTP VAT+ L DPA+ +T  G F+RK+SLDELPQL +IL+GDM++VGPRPAL+NQ +LI 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  LRTSQGVHELVPGLTGWAQINGRDELPIPDKVRLDAEYLQRRSFLFDLKILWMTALKVLA  180
             RT+  VH + PGLTG AQ+ GRD+    +KV+ D  Y++ +SF +D+ I+  T  + ++
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  RHGVSH  186
             +GVSH
Sbjct  180  SEGVSH  185

87) wcaJ in NC_014733


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 84/159 (53%), Positives = 115/159 (73%), Gaps = 1/159 (0%)

Query  28   VRLTSPGPIVYWSDRVGRRNRIFKMPKFRSMRIDTPAVATHLLENPSQWLTPIGAFLRKS  87
            +++ S GPIV+  DR G +N++FK+ KFRSMR DTP VAT+ L+ P++ +T  G F+RK+
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKT  86

Query  88   SLDELPQLWSILKGDMSFVGPRPALYNQDDLIALRTAQGVDALVPGLTGWAQVNGRDELP  147
            SLDELPQL +ILKGDM+ VGPRPALYNQ +LI  RT   V+ + PGLTG AQV GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  148  IPQKVALDAEYLHRQSLMFDLKILWMTALKVLTRDGVSH  186
              QKV  D  Y++ QS+ +D+ I+  T  + ++ +GVSH
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

88) GM18_1461 in NC_014973


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 83/160 (52%), Positives = 118/160 (74%), Gaps = 1/160 (0%)

Query  54   SVKLTSKGPVLYWSDRVGKNNSIFSMPKFRTMRINTPAVATHLLTEPDLFLTPIGKFLRK  113
            ++K+ SKGP+++  DR G +N +F + KFR+MR +TP VAT+ L +P  ++T  GKF+RK
Sbjct  27   AIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRK  85

Query  114  SSLDELPQLLSILGGDMSFVGPRPALFNQDDLIELRTQKGIHLLTPGLTGWAQINGRDEV  173
            +SLDELPQL++IL GDM+ VGPRPAL+NQ +LIE RT+  +HL+ PGLTG AQ+ GRD+ 
Sbjct  86   TSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNN  145

Query  174  PIPVKVDFDEHYLKNQSIVLDLKIIFLTAFKVMKREGVIH  213
                KV++D  Y+ NQS+ LD+ II+ T  + +  EGV H
Sbjct  146  TDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

89) lpsB1 in NC_011985


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  139 bits (509),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 83/166 (50%), Positives = 121/166 (73%), Gaps = 1/166 (0%)

Query  26   ILIVAVAVRLTSPGPILYWSNRVGRRNQIFHMPKFRSMRTDTPAVATHLLKDADAYLTPI  85
            +++V++A+++ S GPI++  +R G +N++F + KFRSMR DTP VAT+ L D+  Y+T  
Sbjct  21   LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKT  79

Query  86   GSFLRKSSLDELPQLWCILKGEMSIVGPRPALFNQHDLIALRTERGVDALLPGLTGWAQV  145
            G F+RK+SLDELPQL  ILKG+M++VGPRPAL+NQ +LI  RT+  V+ + PGLTG AQV
Sbjct  80   GKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQV  139

Query  146  NGRDELPIPQKVALDEDYLQRRSFFFDLKIIILTALKVVRSDGVTH  191
             GRD+    QKV  D  Y++ +SF +D+ II  T  + + S+GV+H
Sbjct  140  MGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

90) BcerKBAB4_5069 in NC_010184


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  139 bits (510),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 90/187 (49%), Positives = 136/187 (73%), Gaps = 2/187 (1%)

Query  7    LKQIIDFIFAIVGLVVSSPVFLLLIICIKLDSKGPVLFKQRRIGKGKKEFYILKFRTMRI  66
            +K+I+D++ ++ ++++  P+++L+ I IK++SKGP++FKQ R G  +K F I KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  67   DTPKDMPTHLLEDPEMYITKVGKFLRKTSLDELPQIINIIKGEMSIIGPRPALWNQYDLI  126
            DTP+    +L  DP  YITK GKF+RKTSLDELPQ++NI+KG+M+++GPRPAL NQY+LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  127  EERDKYGANDVVPGLTGWAQINGRDELPIDVKAKLDGEYVKRLSPLFDLKVFFMTVKSVL  186
            E R +   + V PGLTG AQ+ GRD+   D K + D  YV   S  +D+ +++ T+K+ +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  187  KSEGVRE  193
             SEGV +
Sbjct  179  SSEGVSH  185

91) Gmet_1337 in NC_007517


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  139 bits (511),  Expect = 9e-35, Method: Compositional matrix adjust.
 Identities = 88/186 (48%), Positives = 136/186 (74%), Gaps = 1/186 (0%)

Query  1    MKRVFDlvlsfllmlvfslpmlVTALLVKLTSRGPILYWSDRVGRNNAIFRMPKFRTMRT  60
            MKR+FD+  S+  +++F   +++ ++ +K+ S+GPI++  DR G +N +F++ KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPAVATHLLSDPDRWLTPIGKFLRKTSLDELPQLYSILRGDMSFVGPRPALFNQDDLVA  120
            DTP VAT+ L DP   +T  GKF+RKTSLDELPQL++IL+GDM+ VGPRPAL+NQ +L+ 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  LRTEKGVHRLTPGLTGWAQINGRDELPIPVKVEYDAYYLQNRSLFFDLKIMILTAIKVLR  180
             RT+  VH + PGLTG AQ+ GRD+     KV+YD +Y++N+S+ +D+ I+  T  + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  RDGVTH  186
             +GV+H
Sbjct  180  SEGVSH  185

92) Bsel_3047 in NC_014219


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  138 bits (508),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 78/164 (48%), Positives = 121/164 (74%), Gaps = 2/164 (1%)

Query  26   LMLIVGIKLDSKGPVLFKQKRVGINQTYFNILKFRTMRIDTPKDTPTHLLDNPDQYITKM  85
            +++ ++IK++SKGP++FKQ R G+++  F+I KFR+MR DTP+ +  +L  +P +YITK 
Sbjct  22   FLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKT  79

Query  86   GKFLRKTSLDELPQIWNIFVGQMSIIGPRPALWNQYDLIAERDKYDANDVPPGLTGWAQI  145
            GKF+RKTSLDELPQ+ NI+ G+M+++GPRPAL NQY+LI  R + + + V PGLTG AQ+
Sbjct  80   GKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQV  139

Query  146  NGRDELPIEVKAKLDGEYVERIGLWMDIKCFFGTIVSVVKSDGV  189
             GRD+   + K + D  YVE  ++ +D+  ++ TI + + S+GV
Sbjct  140  MGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

93) N134_05845 in NC_021872


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  137 bits (505),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 90/187 (49%), Positives = 132/187 (71%), Gaps = 3/187 (1%)

Query  24   KRFLDFVFSLIGIVVLAVPMLIVAIVIKVDSPKEQILFRQKRVGKNNHEFTIYKFRSMRQ  83
            KR++D+  SL +I+++   +++V+I IK++S K  I+F+Q R G +N  F IYKFRSMRQ
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIES-KGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  84   DAPHEMATKNFENPEAYITPVGKFIRKASLDELPQLFNVFMGEMSIVGPRPLIPNEGKVL  143
            D+P+  + +   +P  YIT  GKFIRK+SLDELPQLFN++ G+M++VGPRP + N+  ++
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  144  ELREEYGANKILPGITGLAQVHGRDEITDENKAAYDGKYALNVSWLLDLSIIFKTILDVI  203
            E R +   + + PG+TGLAQV GRD+ TD++K  YD  Y  N S  LD+ II+KTI + I
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  204  HSRGVRE  210
             S GV +
Sbjct  179  SSEGVSH  185

94) Amet_0201 in NC_009633


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  137 bits (503),  Expect = 3e-34, Method: Compositional matrix adjust.
 Identities = 77/167 (47%), Positives = 122/167 (74%), Gaps = 2/167 (1%)

Query  24   PVFLVLILAIKVDSPGPVLFKQKRVGIHKSHFNILKFRTMRIDTPKDTPTHLLDNPDQWI  83
            P+++++ +AIK++S GP++FKQ R G+ +  F+I KFR+MR DTP+ +  +L  +P + I
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYI  76

Query  84   TKVGKFLRRTSLDELPQIINIFKGEMSIIGPRPALWNQYDLIEERDKYGANDVPVGLTGW  143
            TK GKF+R+TSLDELPQ++NI+KG+M+++GPRPAL NQY+LIE R +   + V  GLTG 
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  144  AQINGRDELEIDVKAKLDGEYAEKIGFMMDVRCFFGTVISVLRTDGV  190
            AQ+ GRD+   D K + D  Y E+ +F +D+  ++ T+ + + ++GV
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

95) MPD5_1390 in NC_016938


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  137 bits (502),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 84/157 (54%), Positives = 121/157 (78%), Gaps = 2/157 (1%)

Query  34   KFDSKGPVLFTQRRVGKDKTYFNIYKFRTMTVDTPKEVPTHLLENAECCITRSGKILRKT  93
            K++SKGP++F Q R G  +  F+IYKFR+M  DTP +V+T+ L+ A+  IT++GK++RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRLDPADY-ITKTGKFIRKT  86

Query  94   SLDELPQLFNILRGDMAIIGPRPALWNQYDLIEKRDKYRVHTIRPGLTGLAQINGRDELS  153
            SLDELPQLFNIL+GDMA++GPRPAL NQY+LIEKR +  VH ++PGLTGLAQ+ GRD+ +
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  154  IEYKVRLDREYTNNLSFFTDLQCFFMTFKLIWTGTGI  190
             + KV+ D+ Y +N SF  D+  ++ T+K   ++ G+
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

96) Sama_2247 in NC_008700


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  136 bits (500),  Expect = 6e-34, Method: Compositional matrix adjust.
 Identities = 84/173 (49%), Positives = 125/173 (73%), Gaps = 1/173 (0%)

Query  6    IKRIFDLFIVLFATVFLFPLLIAVCFLIKVFDPGPIIFKQKRIGRNAKEFDFYKFRSMPV  65
            +KRIFD+F  L+A ++++PLL+ V + IK+   GPI+FKQ R G + K F +YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   NTGDIPSDKLGSID-ITWVGRLIRRTNLDELPQLFNVLKGDMSIVGPRPPIVSQRQLVEL  124
            +T ++++D+L++ D IT  G++IR+T+LDELPQLFN+LKGDM++VGPRP++ +Q +L+E 
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  125  RKQNGAIACRPGLTGLAQVSAFDGMTVEQKAAFDAEYARKVSFLTDVKIILRT  177
            R +      +PGLTGLAQV + D  T +QK  +D  Y  + SF  D+ II +T
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

97) Apre_1493 in NC_013171


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  136 bits (498),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 91/188 (49%), Positives = 135/188 (72%), Gaps = 3/188 (1%)

Query  6    VKNILDRILALLGLIILSPIFLLTALAIKIEEPRGKVFFIQDRSGKEGKAFSCIKFRSMS  65
            +K I+D + +L ++II+ P+++L ++AIKIE ++G + F QDR+G   K F   KFRSM 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  66   TEAPNNAATWELDNADSYITKVGRFIRKTSIDELPQLINIIRGDMSIVGPRPVILKEEEL  125
             ++PN A+ + LD AD YITK G+FIRKTS+DELPQL+NI++GDM++VGPRP + ++ EL
Sbjct  60   QDTPNVATDR-LDPAD-YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL  117

Query  126  INLRRKFGALSVRPGITGLSQISGRDNLPPKKKAETDGEYAANVTFLNDLKIILKTIPQV  185
            I+ R +     V+PG+TGL+Q+ GRDN    +K + D  Y  N +F  D+ II KTI + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  186  LSGEGVSE  193
            +S+EGVS+
Sbjct  178  ISSEGVSH  185

98) Sala_1586 in NC_008048


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  135 bits (496),  Expect = 1e-33, Method: Compositional matrix adjust.
 Identities = 79/186 (43%), Positives = 133/186 (72%), Gaps = 1/186 (0%)

Query  2    IKRVFDLMLASLTVILLAPLMLCVALAIRLDSAGPAVFWSQRFGRDGRLFLMPKFRTMHI  61
            +KR+FD+  +  ++I++ PL++ V++AI+++S GP VF  +R G   +LF + KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  62   DTPLLPTHLLRDGASRVTRLGRFLRRTSLDELPQLFSVIAGDMSLVGPRPALFNQDDLMR  121
            DTP ++T+ L D A  +T+ G+F+R+TSLDELPQLF+++ GDM++VGPRPAL+NQ +L+ 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  122  LRAECGVTALRPGITGWAQINGRDELTISEKVTLEREYLARMSLAFDVKILILTIVRVLD  181
             R++  V  ++PG+TG AQ+ GRD+ T  +KV  ++ Y+   S+ +D+ I+  TI   + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  182  RRSISH  187
              ++SH
Sbjct  180  SEGVSH  185

99) MPTP_0528 in NC_015516


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  135 bits (495),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 83/157 (53%), Positives = 120/157 (77%), Gaps = 2/157 (1%)

Query  34   KFDSKGPVLFTQRRVGKDKTYFNIYKFRTMTVDTPKEVPTHLLENAECCITRSGRILRKT  93
            K++SKGP++F Q R G  +  F+IYKFR+M  DTP +V+T+ L+ A+  IT++G+++RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRLDPADY-ITKTGKFIRKT  86

Query  94   SLDELPQLFNILRGDMAIIGPRPALWNQYDLIEKRDKYRVHTIRPGLTGLAQINGRDELS  153
            SLDELPQLFNIL+GDMA++GPRPAL NQY+LIEKR +  VH ++PGLTGLAQ+ GRD+ +
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  154  IEYKVRLDREYTNNLSFFTDLQCFFMTFKLIWIGTGI  190
             + KV+ D+ Y +N SF  D+  ++ T+K    + G+
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

100) Q91_1974 in NC_018697


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 85/164 (52%), Positives = 119/164 (73%), Gaps = 1/164 (0%)

Query  23   IVAILVRVTSKGPALYWSDRVGINNTIFKMPKFRSMKTDTPEVATHLLKDPKSLLTPIGG  82
            +V+I +++ SKGP ++  DR G++N +FK+ KFRSM+ DTP+VAT+ L DP   +T  G 
Sbjct  23   LVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGK  81

Query  83   FLRKSSLDELPQLWCILKGDMRFVGPRPALFNQGDLIALRTKNGVHEMLPGLTGWAQVNG  142
            F+RK+SLDELPQL  ILKGDM  VGPRPAL+NQ +LI  RT+  VH + PGLTG AQV G
Sbjct  82   FIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMG  141

Query  143  RDELPISKKVELDVEYMHRRSFFFDIYILWLTFLKVLKRDGVSH  186
            RD+    +KV+ D  Y++ +SF +D+YI+  T+ + +  +GVSH
Sbjct  142  RDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

101) Cphamn1_0384 in NC_010831


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  135 bits (494),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 132/188 (71%), Gaps = 8/188 (4%)

Query  2    IKRVFDCLISLFALLILFPVMLFVALVVRITLGSPVLFVQERPGLLGKPFRLYKFRTMTD  61
            +KR+FD + SL+A++I++P++++V++ ++I   +P++F Q+RPG+  K F++YKFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  62   E-RGADGRLLSNRERLTGTGRFLRSTSLDELPGLWNVFVGDMSLVGPRPLLTEYLDHYSE  120
            +        L   + +T TG+F+R TSLDELP L N++ GDM++VGPRP L  Y ++Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYEL  117

Query  121  FEARR----HDVKPGITGWAQVNGRNAISWEEKFRYDVWYVDNRSFFLDLKILWMTVKKV  176
            +E R     H VKPG+TG AQV GR+  + ++K +YD  YV+N+SF LD+ I+  T+K+ 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  177  FFREGISH  184
            +  EG+SH
Sbjct  178  ISSEGVSH  185

102) lpsB1 in NC_010997


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  134 bits (493),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 87/187 (47%), Positives = 131/187 (71%), Gaps = 3/187 (1%)

Query  3    LKRAVDILLAVVASVILFVPIL-VVALCVRMTSPGPILYWSKRVGRFNQIFLMPKFRSMR  61
            +KR  DI+ + + ++I+F+P+L +V++ +++ S GPI++   R G  N++F + KFRSMR
Sbjct  1    MKRIFDIF-SSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  62   VDTPTVATHLLENPDRFLTPIGSFLRKSSLDELPQLWCILGGRMSFVGPRPALYNQYDLI  121
             DTP VAT+ L+ P  ++T  G F+RK+SLDELPQL  IL G M+ VGPRPALYNQY+LI
Sbjct  60   QDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  ELRTAHGVDKLLPGLTGWAQINGRDELPIPEKVKFDVEYLHRRSIGFDMRILFLTAGKVI  181
            E RT   V+ + PGLTG AQ+ GRD+    +KV++D  Y++ +S+ +DM I++ T  + I
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  182  RRKGIKH  188
               G+ H
Sbjct  179  SSEGVSH  185

103) Exig_2633 in NC_010556


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  134 bits (491),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 89/185 (49%), Positives = 131/185 (71%), Gaps = 2/185 (1%)

Query  6    IKRPLGFVIALVACLILIPVFMLIMATIKLESRGPIFFKQKRVGLNKKYFNILKFRTMYI  65
            +KR +++  +L A +I++P++ L+  +IK+ES+GPI FKQ R G+++K F+I KFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   ETPNDTPTHLLADPDVYITRIGKILRKTSLDELPQLFNILKGEMAFVGPRPALWNQYDLI  125
            +TPN +  +L  DP  YIT+ GK++RKTSLDELPQLFNILKG+MA VGPRPAL NQY+LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  126  DERDKYNANDTLPGLTGWAQINGRDELPIEVKAKLDGEYIRRMGLLMDTRCFVATIFSVL  185
            + R + N +   PGLTG AQ+ GRD+   + K + D  Y+   ++ +D   +  TI + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  186  RSDGV  190
             S+GV
Sbjct  179  SSEGV  183

104) HDN1F_10490 in NC_014366


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  134 bits (492),  Expect = 3e-33, Method: Compositional matrix adjust.
 Identities = 79/166 (48%), Positives = 119/166 (72%), Gaps = 1/166 (0%)

Query  23   MIVIGGCVRLTSSGAAIYWSTRIGANNRPFQMPKFRTMRADTPAVATHMLADPSVWLSPI  82
            +++++  +++ S G+ ++   R G +N+ F++ KFR+MR DTP VAT+ L DP+  ++  
Sbjct  21   LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKT  79

Query  83   GGFLRKTSLDELPQLWSILIGNMSFVGPRPALFNQYDLIEQRTQVGVHRLLPGLTGWAQV  142
            G F+RKTSLDELPQL +IL G+M+ VGPRPAL+NQY+LIE+RT+V VH + PGLTG AQV
Sbjct  80   GKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQV  139

Query  143  NGRDELLVQDKVKLDHEYLLRRSFRFDFWILILTIFRVLKRDGVLH  188
             GRD+   ++KV+ D  Y+  +SF++D  I+  TI   +  +GV H
Sbjct  140  MGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

105) Varpa_4678 in NC_014931


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 80/155 (52%), Positives = 114/155 (74%), Gaps = 1/155 (0%)

Query  32   SRGPVLYWSDRVGRNNRIFKMPKFRSMRTGTPAVATHLLTDPKSHLTSIGPLLRKSSLDE  91
            S+GP+++  DR G +N++FK+ KFRSMR +TP VAT+ L DP   +T  G ++RK+SLDE
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRKTSLDE  90

Query  92   LPQLWSILKGDMSFVGPRPALFNQTDLIDLRTGHGVHLLVPGLTGWAQVNGRDELPIPVK  151
            LPQL +ILKGDM+ VGPRPAL+NQ +LI+ RT   VHL+ PGLTG AQV GRD+     K
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  152  VQFDAEYLQRRSLAFDIRILWLTFVKVLKRDGVTH  186
            VQ+D  Y++ +S+ +D+ I+  T+ + +  +GV+H
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

106) Dtox_4101 in NC_013216


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  134 bits (490),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 79/167 (48%), Positives = 121/167 (73%), Gaps = 2/167 (1%)

Query  23   PVFLFLFIAIKFDSKGPVFFKQKRVGIYKSHFNILKFRTMRIDTPKDTPTHLLENPEQYI  82
            P+++++ IAIK++SKGP+ FKQ R G+ +  F+I KFR+MR DTP+ +  +L  +P +YI
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYI  76

Query  83   TRIGKFLRKSSLDELPQIWNVLLGQMSIIGPRPALWNQYDLIEERDKYGANDIIPGLTGW  142
            T+ GKF+RK+SLDELPQ+ N+L G+M+++GPRPAL NQY+LIE R +   + + PGLTG 
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  143  AQINGRDEISIKVKAKLDGEYVEKISFWMDFKCFIWTIASVLKGDGI  189
            AQ+ GRD+ +   K + D  YVE+ SF +D   +  TI + + ++G+
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

107) Cphy_3507 in NC_010001


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  133 bits (489),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 115/157 (74%), Gaps = 2/157 (1%)

Query  34   KIDSRGPVLFKQKRVGRHKSYFNILKFRTMRIDTPKDTPTHMLENPDYWITRVGKFLRKT  93
            KI+S+GP++FKQ R G  +  F+I KFR+MR DTP + +T+ L+ +DY IT+ GKF+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRLDPADY-ITKTGKFIRKT  86

Query  94   SLDELPQIFNIIKGDMSIIGPRPALWNQYDLIDERDKFGANNILPGLTGWAQINGRDELP  153
            SLDELPQ+FNI+KGDM+++GPRPAL NQY+LI+ R +   + + PGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  154  IDVKAKLDGEYVNKIGFSMDVKCFFGTFIAVLKRDGV  190
             D K + D  YV++ +F +D+  ++ T+   +  +GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

108) Rleg2_6496 in NC_011371


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  133 bits (489),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 88/187 (48%), Positives = 129/187 (69%), Gaps = 3/187 (1%)

Query  3    LKRAVDFFLAVIASMILFVPIL-IVALCVRLTSPGPILYWSKRVGRFNRIFLMPKFRSMR  61
            +KR  D+F ++ A +I+F+P+L +V++ +++ S GPI++   R G  N++F + KFRSMR
Sbjct  1    MKRIFDIFSSLYA-IIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  62   VDTPTVATHLLENPDRFLTPIGSFLRKSSLDELPQLWCILGGRMSFVGPRPALYNQDDLI  121
             DTP VAT+ L+ P  ++T  G F+RK+SLDELPQL  IL G M+ VGPRPALYNQ +LI
Sbjct  60   QDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  ELRTAHGVDQLLPGLTGWAQINGRDELPVPEKVKFDVEYLKRRSFGFDMRILFLTAGKVI  181
            E RT   V+ + PGLTG AQ+ GRD+    +KV++D  Y+  +SF +DM I++ T  + I
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  182  RRKGIQH  188
               G+ H
Sbjct  179  SSEGVSH  185

109) ELI_4561 in NC_014624


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  133 bits (488),  Expect = 6e-33, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 132/185 (72%), Gaps = 2/185 (1%)

Query  7    IKILIDIFVAVLSLIALMPVFGVIAAAIKWDSEGPVLFKQKRCGQYGRTFLIYKFRTMYK  66
            +K ++DIF ++ ++I ++P++ +++ AIK +S GP++FKQ R G   + F IYKFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  67   TAPYDRPVKELKNPEQYITRTGRVLRRTSLDELPQIFNMIKGEMSLIGPRPFLLAEGEVL  126
             +P      +  +P +YIT+TG+ +R+TSLDELPQ+FN++KG+M+++GPRP L  + E++
Sbjct  61   DTP--NVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  127  AAREKAGITAVRPGITGLAQINGRNLISNDEKVVFDRKYVENICFLTDAAIFFKTIRYVI  186
              R +  +  V+PG+TGLAQ+ GR+  ++D+KV +D+ YVEN  F  D  I++KTI+  I
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  187  KRQDI  191
              +++
Sbjct  179  SSEGV  183

110) wcaJ in NC_009659


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 82/159 (52%), Positives = 115/159 (73%), Gaps = 1/159 (0%)

Query  22   VKITSKGPAVYWSDRVGKHNKIFKMPKFRTMQVDTPAVATHLLTDPQQFLTPIGSFLRKS  81
            +KI SKGP V+  DR G  NK+FK+ KFR+M+ DTP VAT+ L DP +++T  G F+RK+
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRKT  86

Query  82   SLDELPQLWSILKGDMSFVGPRPALFNQDDLVALRTRFGVDNIKPGLTGWAQINGRDELP  141
            SLDELPQL +ILKGDM+ VGPRPAL+NQ +L+  RT   V+ +KPGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  142  IPEKVALDVEYLKLQSFWFDIKILVLTFQKVLKKDGITH  180
              +KV  D  Y+  QSF +D+ I+  T+++ +  +G++H
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

111) Awo_c21060 in NC_016894


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  132 bits (483),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 79/157 (51%), Positives = 116/157 (74%), Gaps = 2/157 (1%)

Query  34   KMDSKGPIMFKQKRVGINKTHFNILKFRTMLSETPRDVPTHLLDNPDLYITRIGKFLRKT  93
            K++SKGPI+FKQ R G+++  F+I KFR+M  +TP +V+T+ LD +D YIT+ GKF+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRLDPAD-YITKTGKFIRKT  86

Query  94   SLDELPQIINIIKGEMSVIGPRPALWNQYDLIAERDKYGANNVPVGLTGLAQISGRDELT  153
            SLDELPQ++NI+KG+M+V+GPRPAL NQY+LI  R +   + V  GLTGLAQ+ GRD+ T
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  154  IENKARLDGNYANHISLSLDVKCFFGTIAYVCKKDGI  190
             ++K + D  Y ++ S+ LD+  ++ TI      +G+
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

112) Rfer_1263 in NC_007908


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  132 bits (485),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 91/186 (49%), Positives = 138/186 (75%), Gaps = 1/186 (0%)

Query  1    MKRLFDLIAGACaglvlllpivlvalavrlTSKGPALYWSDRVGRNNKIFKMPKFRSMQI  60
            MKR+FD++++  A +++L  + LV++A+++ SKGP ++  DR G +NK+FK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   GTPAVATHLLSNPDAYLTPIGSFLRKSSLDELPQLWSILAGDMSFVGPRPALFNQHDLIE  120
            +TP VAT+ L +P  Y+T  G F+RK+SLDELPQL +IL GDM+ VGPRPAL+NQ +LIE
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  LRTQQGVHPLVPGLTGWAQVNGRDELPILDKVKLDVEYLHHRSLWFDIRILWLTLVKVLR  180
             RT+  VH + PGLTG AQV GRD+    +KV+ D  Y++++S+ +D+ I+  T+ + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  RDGVSH  186
             +GVSH
Sbjct  180  SEGVSH  185

113) Exig_2567 in NC_010556


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  132 bits (484),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 89/187 (48%), Positives = 126/187 (68%), Gaps = 8/187 (4%)

Query  1    MKRTFDFTVSLLAIIVLLPVYAFVAVLIYTKLGRPLFFNQVRPGYKGELFKIYKFRTMSN  60
            MKR FD+  SL AII++LP+  +V++ I      P+ F+Q RPG K  LFKIYKFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   ET-DADGKLLPDADRIPKSVEWIRRLSLDEIPQFFNILRGQMSFVGPRPLLVSYLNHY--  117
            +T +     L  AD I K+   IR+ SLDE+PQ+FNIL+G+M+ VGPRP L  Y N+Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYEL  117

Query  118  --TKEQMTRHDVLPGLTGWAQIHGRNATTWQQRLEQDQWYAANHTFRLDLYILWKTVKIV  175
               + ++  H V PGLTG AQ+ GR+  T +Q+++ D+ Y  N++F+LD+YI+ KT+K  
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  176  ISSEGNS  182
            ISSEG S
Sbjct  178  ISSEGVS  184

114) cps2E in NC_017621


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  132 bits (486),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 83/157 (53%), Positives = 114/157 (73%), Gaps = 2/157 (1%)

Query  33   KLDSRGPVLFKQKRVGKNKSYFMIYKFRSMYVDAPSDMPTHLLKDPTAMITKVGAFLRKT  92
            K++S+GP++FKQ R G ++  F IYKFRSM  D+P+    +L  DP+  ITK G F+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKTGKFIRKT  86

Query  93   SLDELPQLFNIFKGEMAIVGPRPALWNQYDLIEERDKYGANDIRPGLTGWAQINGRDELE  152
            SLDELPQLFNI+KG+MA+VGPRPAL NQY+LIE R +   + ++PGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  153  IDEKSKLDGYYVQNMSLGLDIKCFLGTFLSVARSEGV  189
             D+K + D +YV+N S+ LD+  +  T+ +   SEGV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

115) EAT1b_1192 in NC_012673


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  132 bits (486),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 81/157 (52%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  34   KIDSRGPVFFKQERIGLRETRFWMYKFRTMHQDTPNDVPTHLFNDSTKHITRVGAFLRKT  93
            KI+S+GP+ FKQ+R G+++  F +YKFR+M+QDTPN    +L  D++  IT+ G F+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKTGKFIRKT  86

Query  94   SLDELPQLVNILKGEMAIVGPRPALWNQDDLVEARRQVGATEALPGLTGWAQVKGRDELP  153
            SLDELPQL NILKG+MA+VGPRPAL NQ +L+E R +V      PGLTG AQV GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  154  IEVKAKLDGEYVRQMSFWFDLRCIALTVRNVLLREGI  190
             + K + D  YV + SF +D+  I  T++N +  EG+
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

116) Btus_0882 in NC_014098


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  132 bits (485),  Expect = 9e-33, Method: Compositional matrix adjust.
 Identities = 81/189 (43%), Positives = 136/189 (72%), Gaps = 11/189 (5%)

Query  2    LKRLFDIVVSSFALVILSPLLLGIAVAIRIDSPGPALFRQVRAGKDGVPFVIFKYRTMVT  61
            +KR+FDI  S +A++I+ PLL+ +++AI+I+S GP +F+Q R+G     F I+K+R+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  62   GAESLGDGVYTGQSDPR--ITRVGALLRRYSLDELPQLINILRGDMSVVGPRPTLMEQVE  119
            ++ +++    T++ DP   IT+ G ++R+ SLDELPQL+NIL+GDM+VVGPRP+L +Q E
Sbjct  61   DTPNVA----TDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYE  116

Query  120  RYTADQRERLR---VRPGITGWAQINGRNEITWDERIELDRWYVHNWSFWLDLKILFRTI  176
                ++R  +    V+PG+TG AQ+ GR++ T D++++ D+ YV+N SF LD+ I+++TI
Sbjct  117  --LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

Query  177  GVVVRGNGV  185
               + ++GV
Sbjct  175  KNTISSEGV  183

117) WKK_06375 in NC_015759


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  131 bits (479),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 73/178 (42%), Positives = 130/178 (74%), Gaps = 1/178 (0%)

Query  6    KRFLDTIIALCMLVILIIPMIIEALCIKMTSNGPVFFAQKRYGINSKIFTMYKFRSMRVD  65
            KR++D + +L  ++I++  +++ ++ IK+ S+GP+ F Q R G+++K+F +YKFRSMR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  66   TPEISNQEFKNIGDYVTPVGRFLRKTSLDELPQLWNIVKGEMSIVGPRPLSDSDLYVVKL  125
            TP+++ + + + +DY+T  G+F+RKTSLDELPQL NI+KG+M++VGPRP   ++  ++  
Sbjct  62   TPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  126  REKNGANLVRPGITGLAQINGRNNISDETKAALDNAYANHITLLGDLTILLRTVLNVL  183
            R +   +LV+PG+TGLAQ+ GR+N +D+ K   D+ Y ++ ++  D+ I+ +T+ N +
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

118) CAP2UW1_0117 in NC_013194


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  130 bits (478),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 83/186 (45%), Positives = 130/186 (70%), Gaps = 1/186 (0%)

Query  3    MKRFFDLLLGLCTATvlalpilivavlvRLTSRGPALYWSDRVGKGNAIFRMPKFRSMRV  62
            MKR+FD++ +L +  ++   +++V++ +++ S+GP ++  DR G  N +F++ KFRSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  63   GAPTVATHLLQNPEAYLTPIGSFLRRSSLDELPQLWSILVGDMSFVGPRPALFNQQDLVA  122
            ++P VAT+ L +P  Y+T  G F+R++SLDELPQL +IL GDM+ VGPRPAL+NQ +L+ 
Sbjct  61   DTPNVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  123  LRTEYGVHRLLPGLTGWAQVNGRDELPIPEKVRLDVEYLQRASLTFDIHILWLTAVKVLR  182
             RT+  VH + PGLTG AQV GRD+    +KV+ D  Y++  S+ +D+ I+  T  + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  183  REGVSH  188
             EGVSH
Sbjct  180  SEGVSH  185

119) zj316_2p03 in NC_021904


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  130 bits (476),  Expect = 6e-32, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 134/185 (73%), Gaps = 2/185 (1%)

Query  6    MKRVIDFVLALLGliilspvyliiiiaiKLDSKGPVLFEQERMAQNKTSFKIYKFRTMRV  65
            MKR++D+  +L ++II+ P+ +++ IAIK++SKGP++F Q+R + ++  FKIYKFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DTPHNMPTHMLAHAGSFITRVGKILRKTSLDELPQLLNILKGEMSIIGPRPCLLNQTDLI  125
            DTP+    ++  +++ +IT+ GK++RKTSLDELPQL+NILKG+M+++GPRP L NQ +LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  126  AARDEYGANAVKPGLTGLAQISGRDELPIPVKAKYDGDYCQKITFIGDAKLFLGTILSVL  185
              R +   + VKPGLTGLAQ+ GRD+     K +YD  Y ++ +F  D  ++  TI + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  186  EHDGV  190
              +GV
Sbjct  179  SSEGV  183

120) Rmag_0887 in NC_008610


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  130 bits (475),  Expect = 7e-32, Method: Compositional matrix adjust.
 Identities = 85/187 (46%), Positives = 132/187 (71%), Gaps = 3/187 (1%)

Query  1    MKRGFDLLLVIICTSLMLLPII-VVAVLVKSTLKGSILYWSDRVGKNNIIFNMPKFRTMR  59
            MKR FD++   + + +++LP++ +V++ +K   KG+I++  DR G +N +F++ KFR+MR
Sbjct  1    MKRIFDIF-SSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  60   MNTPIIAKHLLNNPSTYLSPIGEFLRRTSLDELPQLYSILKGDMSFVGPRPALFNQEDLI  119
             +TP +A + L+ P+ Y++  G F+R+TSLDELPQL++ILKGDM+ VGPRPAL+NQ +LI
Sbjct  60   QDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  120  ALRTKKGVYKLLPGVTGWAQVNGRDTLSIIDKVNLDIEYIAYQSFWFDIRILWMTFLKVI  179
              RT+  V  + PG+TG AQV GRD  +  +KV+ D  Y+  QSF +D+ I+  T+ + I
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  180  KRENVSH  186
              E VSH
Sbjct  179  SSEGVSH  185

121) M301_1255 in NC_014207


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  129 bits (473),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 78/159 (50%), Positives = 116/159 (73%), Gaps = 1/159 (0%)

Query  29   VRLTSIGPVLYWSDRVGRNNHIFKMPKFRTMRVNTPAVATHLLSDPQQYLTPIGSFLRKS  88
            +++ S GP+++  DR G +N +FK+ KFR+MR +TP VAT+ L DP +Y+T  G F+RK+
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRKT  86

Query  89   SLDELPQLWSIIKGDMSFVGPRPALFNQVDLMGLRTEFGVDKLLPGLTGWAQINGRDELP  148
            SLDELPQL +I+KGDM+ VGPRPAL+NQ +L+  RT+  V+ + PGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  149  IPIKVKLDVEYLHKQSFLLDLKIIFLTFLKVLRRDGIQH  187
               KV+ D  Y+++QSF LD+ II+ T+ + +  +G+ H
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

122) Dsui_0054 in NC_016616


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  129 bits (473),  Expect = 9e-32, Method: Compositional matrix adjust.
 Identities = 84/158 (54%), Positives = 111/158 (71%), Gaps = 1/158 (0%)

Query  29   RFTSPGPVLYWSDRVGRHNRIFKMPKFRSMRVGTPAVATHLLTDPKAYLTPVGSFLRKSS  88
            ++ S GP+++  DR G  N++FK+ KFRSMR +TP VAT+ L DP  Y+T  G F+RK+S
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRKTS  87

Query  89   LDELPQLWSILKGDMSFVGPRPALYNQDDLIALRTEAGVHELVPGLTGWAQVNGRDELPI  148
            LDELPQL +ILKGDM+ VGPRPALYNQ +LI  RT+  VH + PGLTG AQV GRD+   
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  149  PQKVALDAEYLRRRSLAFDCRIIWLTFLKVVQRDGVSH  186
             QKV  D  Y+  +S+ +D  II  T+ + +  +GVSH
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

123) BCN_5199 in NC_016771


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  128 bits (470),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 82/159 (52%), Positives = 113/159 (72%), Gaps = 2/159 (1%)

Query  35   KVDSKGPVLFKQRRIGKGKKEFYILKFRTMRIDTPKDTPTHLLENPEMYITKLGKFLRKT  94
            K++SKGP++FKQ R G  +K F I KFR+MR DTP+ +  +L  +P  YITK GKF+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKTGKFIRKT  86

Query  95   SLDELPQILNIIKGEMSIVGPRPALWNQYDLIKERDKYGANDIIPGLTGWAQINGRDELP  154
            SLDELPQ++NI+KG+M++VGPRPAL NQY+LI  R +   + + PGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  155  IDVKAGLDGEYAQKISFLLDIKIFLKTVISVAKSDGVKE  193
             D K   D  Y ++ SF LD+ I+ KT+ +   S+GV +
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

124) rfbP in NC_019425


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  128 bits (470),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 137/199 (69%), Gaps = 18/199 (9%)

Query  14   LKRGFDIVFSCICILILF-PIMLVVSLLIWKEDRGSILFIQERTGLNGVRFKIFKFRSMK  72
            +KR FDI FS +  +I+F P++++VS+ I  E +G+I+F Q+R G++   FKI+KFRSM+
Sbjct  1    MKRIFDI-FSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  73   EEIPEKTYMFNPIYGVPSDFIFKSENDEKEHITKIGAFIRKTSIDELPQFFNVLKGDMSI  132
            ++ P+          V++D       D  + ITK G FIRKTS+DELPQ+FN+LKGDM++
Sbjct  60   QDTPN----------VATD-----RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAV  104

Query  133  VGPRPEIPEITCGYNKEQKMRLE-KKAGITGLAQVNGRSDLKNGDKMKYDLYYVKNQSIK  191
            VGPRP + +     +K  ++ ++  K+G+TGLAQV GR +  +++K++YD +YV NQS+K
Sbjct  105  VGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFK  164

Query  192  LELEILWKTIRTILTTKGA  210
            L++ I+ KTI+  +++ G 
Sbjct  165  LDMYIIYKTIKNTISSEGV  183

125) Pnap_3481 in NC_008781


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 79/158 (50%), Positives = 112/158 (71%), Gaps = 1/158 (0%)

Query  29   RLTSPGPALYWSDRVGRHNKIFKMPKFRSMRVGTPAVATHLLANPKAHLTPIGSFLRKSS  88
            ++ S GP ++  DR G  NK+FK+ KFRSMR +TP VAT+ L +P   +T  G F+RK+S
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRKTS  87

Query  89   LDELPQLWSILVGDMSFVGPRPALFNQHDLIELRTRLGVHELVPGLTGWAQINGRDELPI  148
            LDELPQL +IL GDM+ VGPRPAL+NQ +LIE RT + VH + PGLTG AQ+ GRD+   
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  149  PDKVRLDVEYLQRQSLWFDLRILWLTFVKVLRRDGVAH  186
             +KV+ D  Y++ QS+ +D+ I+  T+ + +  +GV+H
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

126) Eab7_2407 in NC_018665


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 90/188 (48%), Positives = 129/188 (69%), Gaps = 10/188 (5%)

Query  1    MKRTFDFTVSLLAIIVLLPVYLFVALFIYTKLGRPIFFNQVRPGYKGELFKIYKFRTMSN  60
            MKR FD+  SL AII++LP+ ++V++ I      PI F+Q RPG K  LFKIYKFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   ETD--ADGRLLPDAERIPKSVEWIRRLSLDEIPQFFNILRGQMSFVGPRPLLVSYLNHY-  117
            +T   A +RL P A+ I K+   IR+ SLDE+PQ+FNIL+G+M+ VGPRP L  Y N+Y 
Sbjct  61   DTPNVATDRLDP-ADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYE  116

Query  118  ---TKEQMTRHDVLPGLTGWAQIHGRNATTWQERLEQDQWYAANQTFRLDLYILLKTVKI  174
                + ++  H V PGLTG AQ+ GR+  T +++++ D+ Y  NQ+F+LD+YI+ KT+K 
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  175  VVLSEGNS  182
             + SEG S
Sbjct  177  TISSEGVS  184

127) AXY_20080 in NC_018704


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  128 bits (469),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 72/155 (47%), Positives = 110/155 (71%), Gaps = 2/155 (1%)

Query  36   DSRGPVLFKQKRIGIHKSHFHILKFRTMRIDTPKDTPTHLLDNPDQWITRVGKFLRKTSL  95
            +S+GP++FKQ R G+ +  F I KFR+MR DTP+ +  +L  +P + IT+ GKF+RKTSL
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKTGKFIRKTSL  88

Query  96   DELPQIINIVKGEMSIIGPRPALWNQFDLIAERDKYGANDVPVGLTGWAQINGRDELPIE  155
            DELPQ++NI+KG+M+++GPRPAL NQ++LI  R +   + V  GLTG AQ+ GRD+   +
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  156  IKAKLDGEYVDRIGFIMDVKCFFGTIVSVFKSDGV  190
             K + D  YV+  +F +D+  ++ TI + + S+GV
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

128) wbtP in NC_008601


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  128 bits (470),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 80/184 (44%), Positives = 132/184 (72%), Gaps = 2/184 (1%)

Query  12   LKRVFDFILSLITLVILSPVMLILAILIRFKLGSPVLFKQPRPGKDEKIFNLYKFRTM-T  70
            +KR+FD++ SL +++I+ P++++++I I++   +P++FKQ RPG  +K+F++YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  71   DARDKDGNLLPDSQRITKFGKFIRSTSLDELPSLMNILKGDMSIVGPRP-LLVEYLPLYN  129
            D+ +   + L  ++ ITK GKFIR TSLDELP L NILKGDM++VGPRP L  +Y  + +
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  130  QEQKKRHLVRPGLTGWAQINGRNATTWQVRFENDTYYISNMSLMLDIKIIMRTFIKVFKR  189
            + + + HLV+PGLTG AQ+ GR+  T + + + D +Y+ N S+ LD+ II +T+ + +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  190  SGIS  193
             G+S
Sbjct  181  EGVS  184

129) Mmol_1038 in NC_012968


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  127 bits (465),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 79/159 (50%), Positives = 115/159 (73%), Gaps = 1/159 (0%)

Query  29   VKVTSTGPALYWSDRVGRHNVIFKMPKFRSMRVDTPAVATHLLNNPQQFLTPIGSFLRKS  88
            +K+ S GP ++  DR G  N +FK+ KFRSMR DTP VAT+ L+ P +++T  G F+RK+
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKT  86

Query  89   SLDELPQLLSIIRGDMSFVGPRPALFNQDDLIALRTKYGVDALMPGLTGWAQINGRDELP  148
            SLDELPQL++I++GDM+ VGPRPAL+NQ +LI  RT+  V+ + PGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  149  IPDKVNLDVAYMQHQSFWFDLKIIVLTFVKVLRRDGVQH  187
              +KV+ D  Y+++QSF +D+ II  T+ + +  +GV H
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

130) Caul_1752 in NC_010338


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  126 bits (460),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 70/155 (46%), Positives = 109/155 (71%), Gaps = 1/155 (0%)

Query  32   SPGPALYWSRRVGRRNRLFAMPKFRTMRIDTPEVATHLLDDPDRWLTPPGRLLRRTSLDE  91
            S GP ++   R G +N+LF + KFR+MR DTP+VAT+ LD P   +T  G+++R+TSLDE
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKTSLDE  90

Query  92   LPQLWSVLVGDMSLVGPRPALFNQDDLVALRIAAGVEALRPGVTGWAQINGRDEIAIPEK  151
            LPQL ++L GDM++VGPRPAL+NQ +L+  R    V+ ++PG+TG AQ+ GRD+ +  +K
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  152  VALDAEYLRRRSFWFDLLILVATVAPVVTGKGVTR  186
            V  D  Y+  +SF +D+ I+  T+   +++ GV++
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

131) ROI_04930 in NC_021040


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  126 bits (462),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 113/157 (72%), Gaps = 2/157 (1%)

Query  35   KLDSPGPIFFTQKRVGIHKTYFQIYKFRTMRTDTPKDMPTHMLANPEQYITKTGRFLRKT  94
            K++S GPI F Q R G+ +  F+IYKFR+MR DTP +++T+ L +P +YITKTG+F+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  95   SLDELPQIFNIFKGDMSIVGPRPALWNQDDLVAERDKYGANDVTPGLTGWAQINGRDELE  154
            SLDELPQ+FNI+KGDM++VGPRPAL NQ +L+  R +   + V PGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  155  IPVKAKLDGEYVKKYGFTMDVRCFFGTFLSVLRQDGV  191
               K + D  YV + +F +D+  ++ T+ + +  +GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

132) RO1_35310 in NC_021012


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  126 bits (462),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 113/157 (72%), Gaps = 2/157 (1%)

Query  35   KLDSPGPIFFTQKRVGIHKTYFQIYKFRTMRTDTPKDMPTHMLANPEQYITKTGRFLRKT  94
            K++S GPI F Q R G+ +  F+IYKFR+MR DTP +++T+ L +P +YITKTG+F+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  95   SLDELPQIFNIFKGDMSIVGPRPALWNQDDLVAERDKYGANDVTPGLTGWAQINGRDELE  154
            SLDELPQ+FNI+KGDM++VGPRPAL NQ +L+  R +   + V PGLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  155  IPVKAKLDGEYVKKYGFTMDVRCFFGTFLSVLRQDGV  191
               K + D  YV + +F +D+  ++ T+ + +  +GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

133) Rleg_6006 in NC_012852


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  126 bits (462),  Expect = 7e-31, Method: Compositional matrix adjust.
 Identities = 78/160 (49%), Positives = 110/160 (69%), Gaps = 1/160 (0%)

Query  60   CVRLTSPGPILYWSKRVGRFNQIFLMPKFRSMRVDTPTVATHLLENPDRFLTPIGSFLRK  119
             +++ S GPI++   R G  N++F + KFRSMR DTP VAT+ L+ P  ++T  G F+RK
Sbjct  27   AIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRK  85

Query  120  SSLDELPQLWCILEGKMSFVGPRPALYNQYDLIELRTAHGVDKLLPGLTGWAQINGRDEL  179
            +SLDELPQL  IL G M+ VGPRPALYNQY+LIE RT   V+ + PGLTG AQ+ GRD+ 
Sbjct  86   TSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNN  145

Query  180  PIPEKVKFDVEYLQRRSFGFDIRILFMTAGKVIRRKGIRH  219
               +KV++D  Y++ +SF +D+ I++ T  + I   G+ H
Sbjct  146  TDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

134) Msip34_0096 in NC_012969


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  126 bits (461),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 78/155 (51%), Positives = 110/155 (71%), Gaps = 1/155 (0%)

Query  33   SPGPAVYWSNRVGKHNDIFRMPKLRSMRIDTPAIATHLLENPSQWLTPIGAFLRKSSLDE  92
            S GP V+  +R G  N +F++ K+RSMR DTP +AT+ L+ P++ +T  G F+RK+SLDE
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKTSLDE  90

Query  93   LPQLWSILKGDMSFVGPRPALFNQDDLIALRTARGVDQLVPGLTGWAQVNGRDELPIPQK  152
            LPQL +ILKGDM+ VGPRPAL+NQ +LI  RT   V+ + PGLTG AQV GRD+    QK
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  153  VLLDEEYLHKQSLIFDLKILWMTALKVLTRDGVSH  187
            V  D  Y+++QS+ +D+ I+  T  + ++ +GVSH
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

135) GWCH70_3256 in NC_012793


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  125 bits (458),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 82/188 (44%), Positives = 129/188 (69%), Gaps = 8/188 (4%)

Query  5    LKRGFDFVVSLIALIILSPVMLITAILVHYKLGSPVIFKQQRPGLHGKPFYLYKFRTMTD  64
            +KR FD+  SL A+II+ P++++ +I +     +P++FKQ+RPG+  K F +YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM--  58

Query  65   ERDENGELLPDHLRLTPF----GQFLRKYSIDELPQLFNVLKGDISLVGPRPLL-MEYLE  119
             R++  ++  D+L  + +    G+F+RK S+DELPQLFN+LKGD+++VGPRP L  +Y  
Sbjct  59   -RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL  117

Query  120  LYTPEQARRHEVKPGITGWAQVNGRNAISWEEKFKLDVWYVDNQSFWLDLKILFLTIIKV  179
            +    +   H VKPG+TG AQV GR+  + ++K + D  YV+NQSF LD+ I++ TI + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  180  FKSEGISH  187
            + SEG+SH
Sbjct  178  ISSEGVSH  185

136) Gura_1698 in NC_009483


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  125 bits (459),  Expect = 1e-30, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 125/185 (68%), Gaps = 2/185 (1%)

Query  8    IKRIFDFCSTLVGLVLISPLLIPVALLVRMIHGSPVLFRQERPGLHGKPFLMHKFRTMTN  67
            +KRIFD+ S+L +++++ PLL+ V++ +++   +P++F+Q+RPG+  K F + KFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  68   E-RDANGILLADEARLTGLGKFLRSTSLDELPELFNVLKGDMSLVGPRP-LLMEYMPLYT  125
            +  +     L     +T  GKF+R TSLDELP+LFN+LKGDM++VGPRP L  +Y  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  126  PEQARRHEVKPGITGWAQVNGRNAISWEEKFKLDVWYVDNSSFWLDLKILWMTFFQVFKR  185
              +   H VKPG+TG AQV GR+  + ++K + D  YV+N SF LD+ I+  T+ + +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  186  EGISQ  190
            EG+S+
Sbjct  181  EGVSH  185

137) SAR116_1964 in NC_014010


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 76/155 (50%), Positives = 113/155 (73%), Gaps = 1/155 (0%)

Query  33   SPGPIFYVSKRVGQNGKLFTMPKFRTMRTDTPELATDKLGDPTTYLTPIGGFLRKTSLDE  92
            S GPI +   R G + KLF + KFR+MR DTP++ATD+L DP+ Y+T  G F+RKTSLDE
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRKTSLDE  90

Query  93   LPQIISVLLGHMSLVGPRPALFNQTDLITQRQKRGIDNLRPGITGWAQVNGRDDIASDIK  152
            LPQ++++L G+M++VGPRPAL+NQ +LI +R +  ++ ++PG+TG AQV GRD+ + D K
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  153  IQLDAEYMARQSLWFDIKIMLITIYAVVSRKDISH  187
            +Q D  Y+  QS+ +D+ I+  TI   +S  ++SH
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

138) epsL in NC_020409


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  125 bits (457),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 123/188 (66%), Gaps = 8/188 (4%)

Query  1    MKRCLDLGITLLALIIFWPFMVLVALLVRIRLGSPVFFRQIRPGRHGKPFEIIKFRTMR-  59
            MKR +D+  +L A+IIF P++ LV++ ++I   +P+ F+Q RPG   K F I KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DLSGPDGVPLPDCDRLTPFGRFLRSTSLDELPELLNVLRGEMSLVGPRPLLMHYLDRYTP  119
            D +      L   D +T  G+F+R TSLDELP+L+N+L+G+M++VGPRP L    ++Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYEL  117

Query  120  FQARR----HEVRPGITGWAQINGRNALSWEQKFEYDVWYIDHQSVTLDIKIIWLTIGSV  175
            ++ R     H V+PG+TG AQ+ GR+  + +QK +YD  Y+++QS  LD+ II  TI + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  176  FKREDVCQ  183
            +  E+V +
Sbjct  178  ISSEGVSH  185

139) GC56T3_3296 in NC_014206


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  125 bits (456),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 129/188 (69%), Gaps = 8/188 (4%)

Query  9    LKRGFDFIVALMALIVLSPIMAATAVLVRWKLGSPVLFKQQRPGLHGKPFYLYKFRTMTD  68
            +KR FD++ +L A+I++ P++   ++ ++    +P++FKQ+RPG+  K F +YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM--  58

Query  69   ERDENGELLPDHMRLTPF----GRFLRKYSLDELPQLLNVLKGDLSLVGPRP-LLMEYLE  123
             R++  ++  D++  + +    G+F+RK SLDELPQL+N+LKGD+++VGPRP L  +Y  
Sbjct  59   -RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL  117

Query  124  LYTPEQARRHEVKPGITGWAQVNGRNAISWEEKFQLDVWYVDHQSFWLDVKILFLTVWKV  183
            +    +   H VKPG+TG AQV GR+  + ++K Q D  YV++QSF LD+ I++ T+ + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  184  LKSEGINH  191
            + SEG++H
Sbjct  178  ISSEGVSH  185

140) SP_0350 in NC_003028


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  124 bits (452),  Expect = 4e-30, Method: Compositional matrix adjust.
 Identities = 80/167 (48%), Positives = 115/167 (69%), Gaps = 2/167 (1%)

Query  36   PVFMIIAIAIKLDSEGPVIFKQKRFGIHKEYFYILKFRSMKIDAPKNVAPRNLYNPEQWI  95
            P++ +++IAIK++S GP++FKQ R G+ +  F I KFRSM+ D+P NVA   L +P + I
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYI  76

Query  96   TKVGAFLRKTSLDELPQLFNILVGNMSIVGPRPAGINELDLIAERDKYGANDILPGLTGW  155
            TK G F+RKTSLDELPQLFNIL G+M++VGPRPA  N+ +LI  R +   + + PGLTG 
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  156  AQINGRDTLSVEMKTELDGYYVKHLSLIMDIRCIVKTIPYVLKRKGI  202
            AQ+ GRD  + + K + D +YV + S+ +D+  I KTI   +   G+
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

141) CLJU_c05410 in NC_014328


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  123 bits (451),  Expect = 5e-30, Method: Compositional matrix adjust.
 Identities = 78/186 (42%), Positives = 130/186 (70%), Gaps = 13/186 (6%)

Query  13   LKRIMDIILSFIGIIAFFPIMFVVAVTIKLDSKGPIIFSQARVGKNGKIFKMYKLRSMTH  72
            +KRI DI+ S+ +II F+P++F+V+++IK++SKGPI+F Q R G + K+FK+YK+RSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  73   DAEQLLDNLQHKNEMTGPIFKIKQDPRITRVGRFIRKTSIDELPQLFNVIKGEMSLVGPR  132
            D+ ++  +            ++     IT+ G+FIRKTS+DELPQLFN++KG+M++VGPR
Sbjct  61   DTPNVATD------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  133  PNLPKEVAKFTSQQKIKL-LAKPGLTCYWQVMGRSSIDFDEWMKLDLKYIKDRSTLLDIK  191
            P L ++   +  + ++++ L KPGLT   QVMGR +   D+ ++ D  Y+ ++S  LD+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  192  LIFKTL  197
            +I+KT+
Sbjct  169  IIYKTI  174

142) LAF_0088 in NC_010610


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  123 bits (449),  Expect = 6e-30, Method: Compositional matrix adjust.
 Identities = 75/161 (47%), Positives = 117/161 (73%), Gaps = 2/161 (1%)

Query  15   AIWIKLDSKGPVLFKQERVGRNGKRFTIYKFRSMSDDAPHQMATSEFDTALGYITRSGQL  74
            +I IK++SKGP++FKQ+R G + K F IYKFRSM +D+P+ +AT  +D A +YIT++G++
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPN-VATDRLDPA-DYITKTGKF  82

Query  75   MRKTSLDELPQLVNVVKGEMSFIGPRPLIPKEKNVLRLRHANGAESLAPGITGLAQVRGR  134
            +RKTSLDELPQL N++KG+M+ +GPRP + ++ +++  R     + + PG+TGLAQV GR
Sbjct  83   IRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGR  142

Query  135  DEVTDTQKANYDGEYASNVTLRGDLLILVETVLAVLARRGV  175
            D+ TD QK +YD  Y  N +++ D+ I+  T+   ++  GV
Sbjct  143  DNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

143) Fphi_1244 in NC_010336


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  123 bits (449),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 88/185 (48%), Positives = 130/185 (71%), Gaps = 2/185 (1%)

Query  6    LKRFLDIVLSFVGLVLLSPVFLIVILMIKKDSKGPILFKQKRYGRGKKFFYIYKFRTMYV  65
            +KR++DI  S+ +++++ P++++V + IK +SKGPI+FKQ R G  +K+F IYKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DTPKDMPTHLLQDPSKCITKVGAFLRKTSLDELPQIINILKGEMSIVGPRPALWNQDDLI  125
            DTP+    +L  DP+  ITK G F+RKTSLDELPQ++NILKG+M++VGPRPAL NQ +LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  126  AERDKYGANDVPVGLTGWAQINGRDELPIAQKAKLDGDYVKYKSTWFDIKCIFLTVFSVF  185
              R +   + V  GLTG AQ+ GRD+    QK + D  YV  +S  +D+  I+ T+ + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  186  ASKGV  190
            +S GV
Sbjct  179  SSEGV  183

144) zobellia_3758 in NC_015844


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  123 bits (448),  Expect = 8e-30, Method: Compositional matrix adjust.
 Identities = 77/181 (43%), Positives = 123/181 (68%), Gaps = 14/181 (7%)

Query  2    ALSILTLALPIILLVVLFLGIANRGSIFFVQKRPGKDGKIFTILKFKTM-NDKKDASGNL  60
            +L  + + LP+++LV + + I ++G+I F Q RPG   K+F I KF++M +D  + + + 
Sbjct  10   SLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDR  69

Query  61   LPDEKRLTSAGKFIRKTSLDELPQLLNVLKGDMSLIGPRPLLVSYLPLYNDY---QRRR-  116
            L     +T +GKFIRKTSLDELPQL+N+LKGDM+++GPRP      +LYN+Y   ++R  
Sbjct  70   LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYNQYELIEKRTN  123

Query  117  ---HEVKPGITGWAQVNGRNAISWNKKFEYDVWYVDHISFPLDLKILFLTVLKVVKTDGI  173
               H VKPG+TG AQV GR+  + ++K +YD  YV++ SF LD+ I++ T+ + + ++G+
Sbjct  124  VNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

Query  174  S  174
            S
Sbjct  184  S  184

145) REMIM1_PA00001 in NC_021906


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  122 bits (445),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 78/158 (50%), Positives = 109/158 (69%), Gaps = 1/158 (0%)

Query  31   RLTSPGPILYWSKRIGRFNQIFLMPKFRSMRVDTPTVATHLLENPERFLTPIGSFLRKSS  90
            ++ S GPI++   R G  N++F + KFRSMR DTP VAT+ L+ P  ++T  G F+RK+S
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKTS  87

Query  91   LDELPQLWCILAGKMSFVGPRPALYNQYDLIELRTVYGVDKLLPGLTGWAQINGRDELPI  150
            LDELPQL  IL G M+ VGPRPALYNQY+LIE RT   V+ + PGLTG AQ+ GRD+   
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  151  PEKVKFDVEYLERRSLGFDMRILFLTAEKVVRRKGIKH  188
             +KV++D  Y+E +S+ +DM I++ T  + +   G+ H
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

146) lpsB1 in NC_007763


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  122 bits (445),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 78/158 (50%), Positives = 109/158 (69%), Gaps = 1/158 (0%)

Query  31   RLTSPGPILYWSKRIGRFNQIFLMPKFRSMRVDTPTVATHLLENPERFLTPIGSFLRKSS  90
            ++ S GPI++   R G  N++F + KFRSMR DTP VAT+ L+ P  ++T  G F+RK+S
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKTS  87

Query  91   LDELPQLWCILAGKMSFVGPRPALYNQYDLIELRTVYGVDKLLPGLTGWAQINGRDELPI  150
            LDELPQL  IL G M+ VGPRPALYNQY+LIE RT   V+ + PGLTG AQ+ GRD+   
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  151  PEKVKFDVEYLERRSLGFDMRILFLTAEKVVRRKGIKH  188
             +KV++D  Y+E +S+ +DM I++ T  + +   G+ H
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

147) wcaJ in NC_006300


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  122 bits (446),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 81/177 (46%), Positives = 123/177 (70%), Gaps = 2/177 (1%)

Query  2    IKRLFDIVVALIALILFSPLYLFVAYKVKQNLGSPVLFKQTRPGLHGKPFEMIKFRTMKD  61
            +KR+FDI  +L A+I+F PL ++V+  +K +  +P++FKQ RPG+  K F + KFR+M++
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  62   GVDE-NGNILPDAERLTPFGKMLRATSLDELPELWNVLKGDMSLVGPRPLLMEYLPLYNE  120
            +  +   + L  A+ +T  GK +R TSLDELP+L N+LKGDM++VGPRP L +   L + 
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  R-QAKRHEVKPGITGYAQVNGRNAISWEQKFELDAWYVEHQSLWLDLKIIAKTIQKV  176
            R + + H VKPG+TG AQV GR+  + +QK + D  YVE+QS+ LD+ II KTI++ 
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

148) BCE_5393 in NC_003909


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  122 bits (445),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 82/186 (45%), Positives = 127/186 (69%), Gaps = 6/186 (3%)

Query  13   IKRPMDFILSLIAIIVLSPVFLIVSILVKTKLGSPVLFKQKRPGLNEEVFMMYKFRTMTD  72
            +KR  D++ SL AII++ P++++VSI +K    +P++FKQ RPG+++ +F +YKFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  73   E-RDADGELLSDDIRLTKFGKFLRSTSLDELPELFNILKGDMSIVGPRPQLVRDMVFMTP  131
            +  +   + L     +TK GKF+R TSLDELP+LFNILKGDM++VGPRP L  +  +   
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQ--YELI  118

Query  132  EQRKR---HSVLPGLTGWAQVNGRNCVTWEEKLNFDLQYINDISFLGDWRIIFITISKVF  188
            E+R     H V PGLTG AQV GR+  T ++K+++D  Y+++ SF  D  II+ TI + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  189  KRDGIS  194
              +G+S
Sbjct  179  SSEGVS  184

149) Ethha_1109 in NC_014828


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  122 bits (445),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 76/171 (45%), Positives = 116/171 (68%), Gaps = 9/171 (5%)

Query  34   KRLFDVLVALAGCVLLSPLMLIAAVGIRLESKGPVIFKQERLGLGGKTFVIYKFRSMRID  93
            KR+FD++ +L + +++ PL+++ +++I++ESKGP++FKQ+R G+  K F IYKFRSMR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  94   AEASGPAWAKKNDIRITRFGRFLRKYHVDELPQLVNILRGDMSMVGPRPERAYFYAQFER  153
            +   +  +    D  IT+ G+F+RK  +DELPQL NIL+GDM++VGPRP    +Y Q+E 
Sbjct  62   TPNVATDRLDPADY-ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA---LYNQYE-  116

Query  154  DIPEFRDRLA---VKPGLTGWAQVNGGYDIGPKEKCRYDKTYIRRLSWRMD  201
             + E R  +    VKPGLTG AQV G  +    +K +YDK Y+   S ++D
Sbjct  117  -LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLD  166

150) BpOF4_06575 in NC_013791


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  122 bits (445),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 82/193 (43%), Positives = 133/193 (69%), Gaps = 20/193 (10%)

Query  13   IKRPMDFILSLAAIVALSPVLLIVAILVRTKLGSPVLFKQKRPGLNEKVFIMYKFRTMTD  72
            +KR  D++ SL AI+ + P+L++V+I ++    +P++FKQ RPG+++K+F +YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM--  58

Query  73   EKDENGELLPDRVRLTNF----GKFLRSTSLDELPGLFNILKGDMSIIGPRPLLVQYLPL  128
             +++  ++  DR+  +++    GKF+R TSLDELP LFNILKGDM+++GPRP      +L
Sbjct  59   -RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  129  YNDH---QKRR----HEVRPGLSGLAQISGRNAISWEDKFNLDVEYVDNVSFIGDWKIIF  181
            YN+    +KR     H V+PGL+GLAQ+ GR+  + ++K + D  YV+N SF  D  II+
Sbjct  112  YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  182  QTIKKVFVREGIN  194
            +TIK+ +  EG++
Sbjct  172  KTIKNTISSEGVS  184

151) CCC13826_0450 in NC_009802


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  122 bits (445),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 78/184 (43%), Positives = 126/184 (69%), Gaps = 2/184 (1%)

Query  6    LKRVIDILGALFLLILTSPIIIATAIFIYFKVSRDVIFTQARPGLNEKIFKIYKFKTMSD  65
            +KR++DI+++L+ +I+  P+++  +I I +     ++F Q RPG+++K+FKIYKF++M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   E-RDANGELLPDDQRLGKFGKLIRSLSLDELPQLFNVLKGDMSFIGPRPLL-VEYLPIYN  123
            +  +   + L   + + K GK+IR  SLDELPQLFN+LKGDM+ +GPRP L  +Y  I +
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  124  ETQKHRHDVRPGITGLAQVNGRNAISWEKKFEYDVYYAKNLSFMLDVKIALQTIEKVLKR  183
             T+ + H V+PG+TGLAQV GR+  + ++K +YD +Y  N SF LD+ I  +TI + +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  184  SGVS  187
             GVS
Sbjct  181  EGVS  184

152) Asuc_0102 in NC_009655


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  121 bits (443),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 81/177 (46%), Positives = 122/177 (69%), Gaps = 2/177 (1%)

Query  2    IKRLFDIVIASVALILFSPLYLLVAYKVRRNLGSPVLFKQIRPGLHGKPFEMIKFRTMKD  61
            +KR+FDI  +  A+I+F PL +LV+  ++ +  +P++FKQ RPG+  K F + KFR+M++
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  62   GV-DQNGNILPDAERLTPFGKMLRATSLDELPELWNVLKGDMSLVGPRPLLMDYLALYNE  120
            +  +   + L  A+ +T  GK +R TSLDELP+L N+LKGDM++VGPRP L +   L + 
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  121  R-QAKRHDVKPGITGYAQVNGRNAISWEQKFELDAWYVEHQSFWLDLKIIAKTIQKV  176
            R + + H VKPG+TG AQV GR+  + +QK + D  YVE+QSF LD+ II KTI++ 
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

153) BCK_09010 in NC_018491


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 82/186 (45%), Positives = 126/186 (68%), Gaps = 6/186 (3%)

Query  13   IKRPMDFMLSLIAIIVLSPVFLIVSILVKTKLGSPVLFKQKRPGLNEEVFMMYKFRTMTD  72
            +KR  D+  SL AII++ P++++VSI +K    +P++FKQ RPG+++ +F +YKFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  73   E-RDADGELLSDDIRLTKFGKFLRSTSLDELPELFNILKGDMSIVGPRPQLVRDMVFMTP  131
            +  +   + L     +TK GKF+R TSLDELP+LFNILKGDM++VGPRP L  +  +   
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQ--YELI  118

Query  132  EQRKR---HSVLPGLTGWAQVNGRNCVTWEEKLNFDLQYINDISFLGDWRIIFITISKVF  188
            E+R     H V PGLTG AQV GR+  T ++K+++D  Y+++ SF  D  II+ TI + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  189  KRDGIS  194
              +G+S
Sbjct  179  SSEGVS  184

154) HMPREF9243_0861 in NC_015278


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  120 bits (440),  Expect = 3e-29, Method: Compositional matrix adjust.
 Identities = 80/157 (51%), Positives = 107/157 (69%), Gaps = 2/157 (1%)

Query  33   KLDSKGPVFFKQKRIGKNRDFFYIYKFRSMLSETPADMPTHLLKDPAAFITKPGAFLRKT  92
            K++SKGP+ FKQ R G +  +F IYKFRSM  +TP     +L  DPA +ITK G F+RKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKTGKFIRKT  86

Query  93   SLDELPQLINILKGEMAFIGPRPALWNQDDLADERDKYGANDILPGLSGWAQINGRDELP  152
            SLDELPQL+NILKG+MA +GPRPAL NQ +L + R +   + + PGL+G AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  153  IDVKARLDGQYVENMGPMMDIKCFFGTIVSVIRHEGV  189
             D K + D  YVEN +  +D+  ++ TI + I  EGV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

155) LRC_00920 in NC_015975


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  120 bits (439),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 77/165 (47%), Positives = 124/165 (76%), Gaps = 6/165 (3%)

Query  8    LKRIFDICLSGISIIVLFPVWIVVSIAIKFDSKGPIIFSQKRRTKDGKIFEMYKFRSMVV  67
            +KRIFDI  S  +II+++P+ ++VSIAIK++SKGPI+F Q R     K+F +YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  68   DAEKMGTGLFNYANDPRVTKVGRFLRNTSIDELPQLFNVFKGDISIVGPRPCVSYELGEY  127
            D+ +++T+ ++      +TK G+F+R+TS+DELPQLFN++KGD+++VGPRP + Y+  +Y
Sbjct  61   DTPNVATDRLD--PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL-YN--QY  115

Query  128  ETLNKKYKKRFQ-VKGGITGLAQARGRNENSWDEKVTLDNQYIDE  171
            E ++K+ +   + VK G+TGLAQ  GR++N+ D+KV  D+ Y+++
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVEN  160

156) C270_02655 in NC_018673


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  120 bits (439),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 68/161 (43%), Positives = 118/161 (74%), Gaps = 1/161 (0%)

Query  6    IKKLFDFMGAIIALIVLSPLLFVVYITLYITTKDSVIYHQQRVGQYGVIFEIYKFRTLPT  65
            +K++FD+ +++ A+I++ PLLF+V I++ I +K+++++ Q+R G    +F IYKFR++  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DTPILVGEQRVKIRNRVSRFARFLRTTSIDELPQLINILKGDMSLIGPRPVVPQETELVQ  125
            DTP  V+ +R+   + +++ ++F+R TS+DELPQL+NILKGDM+++GPRP + ++ EL++
Sbjct  61   DTPN-VATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  126  LRQASGALNVKPGLTGLAQVNGRKQLKNIQKADFDAIYANH  166
             R       VKPGLTGLAQV GR +  + QK ++D +Y ++
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVEN  160

157) CLJU_c05210 in NC_014328


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  120 bits (439),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 79/196 (41%), Positives = 136/196 (70%), Gaps = 13/196 (6%)

Query  28   IKRCIDLILSFIGIIVFSPIMLIVTAAIKLDSKGSVIFSQMRVGKNGKLFKMYKFRSMVD  87
            +KR +D++ S+ +II+F P++++V+ AIK++SKG+++F Q R G + KLFK+YKFRSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  88   DAEELLDNLRSKNEMTGPMFKIKEDPRITRVGKFIRRTSIDELPQLFNVIKGDMSLVGPR  147
            D+ ++     + + +  + +       IT+ GKFIR+TS+DELPQLFN++KGDM++VGPR
Sbjct  61   DTPNV-----ATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  148  PNLPHEVAKFTECQKAKL-LVKPGLTCYWQVMGRSNIDFEHWMKLDIKYIEDRNTLLDLK  206
            P L ++   +    + ++ LVKPGLT   QVMGR N   ++ ++ D  Y+E+++  LD+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  207  LIFKTFWVFFGDDGAA  222
            +I+KT+   ++ +G +
Sbjct  169  IIYKTIKNTISSEGVS  184

158) Astex_2181 in NC_014816


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  120 bits (437),  Expect = 6e-29, Method: Compositional matrix adjust.
 Identities = 84/190 (45%), Positives = 131/190 (69%), Gaps = 8/190 (4%)

Query  18   KRLFDIAVAGFAILFLLPALVLIAFAVKLDSKGPVIFKQRRSGLNGRQFHIYKFRSMSVM  77
            KR+FDI  + +AI+++LP L L+++A+K++SKGP++FKQ R+G++ + F IYKFRSM   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR-Q  60

Query  78   EDGDVVSQAKATDLRVTRVGGILRRTSLDELPQFFNILKGDMSFVGPRPHALSHDKIFSE  137
            +  +V ++       +T+ G ++R+TSLDELPQ+FNILKGDM+ VGPRP AL ++  + E
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP-ALYNQYELIE  119

Query  138  QVDNYELRFLAKPGLTGLAQVRGFRGEIRDACDIENRVQSDIEYIENWSFVKDVKIMLGT  197
            +  N +++ L KPGLTGLAQV G     RD    +++VQ D  Y+EN SF  D+ I+  T
Sbjct  120  KRTNVNVH-LVKPGLTGLAQVMG-----RDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

Query  198  VRVVLGDDNA  207
            ++  ++ +  
Sbjct  174  IKNTISSEGV  183

159) OOM_0811 in NC_017909


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 87/185 (48%), Positives = 128/185 (70%), Gaps = 2/185 (1%)

Query  6    LKRFLDIVLSFVGLVLLSPVFLIVILMIKKDSKGLIFFKQKRYGKSKKFFYIYKFRTMYI  65
            +KR++DI  S+ +++++ P++++V + IK +SKG I FKQ R G  +K+F IYKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DTPKDMPTHLLQDPSKCITKVGAFLRKTSLDELPQIINILKGEMSIVGPRPALWNQDDLI  125
            DTP+    +L  DP+  ITK G F+RKTSLDELPQ++NILKG+M++VGPRPAL NQ +LI
Sbjct  61   DTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  126  AERDKYGANDVPVGLTGWAQINGRDELPIAQKAKLDGDYVKYKSTWFDIKCIFLTVFSVF  185
              R +   + V  GLTG AQ+ GRD+    QK + D  YV  +S  +D+  I+ T+ + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  186  ASKGV  190
            +S GV
Sbjct  179  SSEGV  183

160) Aeqsu_2910 in NC_018013


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (434),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 80/184 (44%), Positives = 126/184 (69%), Gaps = 2/184 (1%)

Query  15   KPTFDFFCALLGLLVLSPIFLIAWIGLAIANNGKPFFYQRRPGKRERIFTIIKFKTM-ND  73
            K  FD+F +L +++++ P++++  I++ I ++G   F Q RPG ++++F I KF++M +D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  74   KRSADGQLLPDAKRLTAIGSFVRKTSLDELPQLLNVLKGDMSFVGprpllpeylplySE-  132
              +   + L  A  +T  G F+RKTSLDELPQL+N+LKGDM+ VGPRP L +   L    
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  133  TQRKRHNVKPGITGWAQVNGRNAISWEQKFAYDVWYVAHQSFALDLQILFRTVKKVFKSE  192
            T+ + H VKPG+TG AQV GR+  + +QK  YD  YV +QSF LD+ I+++T+K+ + SE
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  193  GISQ  196
            G+S+
Sbjct  182  GVSH  185

161) rfbP in NC_003366


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 84/197 (43%), Positives = 127/197 (65%), Gaps = 18/197 (9%)

Query  26   KRCFDLICSLIALILFSPIFLILYIWVKVDSKGPAFFGHKRIGKDRKYIDVYKFRSMVSN  85
            KR FD++ SL A+I+F P+++++ I +K++SKGP  F + R G   K + +YKFRSM  +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  86   AKEVFDNFTPEQKAEFEKNFKLDDDPRITKCGAFLRKTSLDELPQLINIIKGDMSIVGPR  145
            + +V  +             +LD    ITK G F+RKTSLDELPQL+NI+KGDM++VGPR
Sbjct  62   TPNVATD-------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  146  PIVDKE---VEKYGEYADKLFSVTPGLTGYWQANGRSDTTYEERVQMDMYYIDNRSLWLD  202
            P + ++   +EK  +    L  V PGLTG  Q  GR + T +++VQ D +Y++N+S+ LD
Sbjct  109  PALYNQYELIEKRTNVNVHL--VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLD  166

Query  203  IKIIFKTVISVIKKEGA  219
            + II+KT+ + I  EG 
Sbjct  167  MYIIYKTIKNTISSEGV  183

162) CPF_0595 in NC_008261


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 84/197 (43%), Positives = 127/197 (65%), Gaps = 18/197 (9%)

Query  26   KRCFDLICSLIALILFSPIFLILYIWVKVDSKGPAFFGHKRIGKDRKYIDVYKFRSMVSN  85
            KR FD++ SL A+I+F P+++++ I +K++SKGP  F + R G   K + +YKFRSM  +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  86   AKEVFDNFTPEQKAEFEKNFKLDDDPRITKCGAFLRKTSLDELPQLINIIKGDMSIVGPR  145
            + +V  +             +LD    ITK G F+RKTSLDELPQL+NI+KGDM++VGPR
Sbjct  62   TPNVATD-------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  146  PIVDKE---VEKYGEYADKLFSVTPGLTGYWQANGRSDTTYEERVQMDMYYIDNRSLWLD  202
            P + ++   +EK  +    L  V PGLTG  Q  GR + T +++VQ D +Y++N+S+ LD
Sbjct  109  PALYNQYELIEKRTNVNVHL--VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLD  166

Query  203  IKIIFKTVISVIKKEGA  219
            + II+KT+ + I  EG 
Sbjct  167  MYIIYKTIKNTISSEGV  183

163) CA_C3073 in NC_003030


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 131/188 (70%), Gaps = 19/188 (10%)

Query  28   IKRIIDVFGSLVGIIFLSPVMLIVIVAIKLDSKGPIIFSQKRVGQNGRIFNMYKFRSMVE  87
            +KRI+D+F+SL +II++ P++++V +AIK++SKGPI+F Q R G + ++F++YKFRSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  88   NAERLLGKLQDKNEMSGPMFKMSDDPRITKVGRFIRKTSLDELPQLFNVLRGHMSLVGPR  147
            ++  +       + +  + +       ITK G+FIRKTSLDELPQLFN+L+G+M++VGPR
Sbjct  61   DTPNV-----ATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  148  PNLPNEVKEFNEFQKRK----FMVKPGLTCYWQVMGRSSIGFEEWIELDLKYIKERSTFV  203
            P L    ++++ ++KR      +VKPGLT   QVMGR +   ++ ++ D  Y+ ++S  +
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  204  DLKLIFRT  211
            D+ +I++T
Sbjct  166  DMYIIYKT  173

164) cpsE in NC_015687


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 131/188 (70%), Gaps = 19/188 (10%)

Query  28   IKRIIDVFGSLVGIIFLSPVMLIVIVAIKLDSKGPIIFSQKRVGQNGRIFNMYKFRSMVE  87
            +KRI+D+F+SL +II++ P++++V +AIK++SKGPI+F Q R G + ++F++YKFRSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  88   NAERLLGKLQDKNEMSGPMFKMSDDPRITKVGRFIRKTSLDELPQLFNVLRGHMSLVGPR  147
            ++  +       + +  + +       ITK G+FIRKTSLDELPQLFN+L+G+M++VGPR
Sbjct  61   DTPNV-----ATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  148  PNLPNEVKEFNEFQKRK----FMVKPGLTCYWQVMGRSSIGFEEWIELDLKYIKERSTFV  203
            P L    ++++ ++KR      +VKPGLT   QVMGR +   ++ ++ D  Y+ ++S  +
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  204  DLKLIFRT  211
            D+ +I++T
Sbjct  166  DMYIIYKT  173

165) CEA_G3079 in NC_017295


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (433),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 77/188 (41%), Positives = 131/188 (70%), Gaps = 19/188 (10%)

Query  28   IKRIIDVFGSLVGIIFLSPVMLIVIVAIKLDSKGPIIFSQKRVGQNGRIFNMYKFRSMVE  87
            +KRI+D+F+SL +II++ P++++V +AIK++SKGPI+F Q R G + ++F++YKFRSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  88   NAERLLGKLQDKNEMSGPMFKMSDDPRITKVGRFIRKTSLDELPQLFNVLRGHMSLVGPR  147
            ++  +       + +  + +       ITK G+FIRKTSLDELPQLFN+L+G+M++VGPR
Sbjct  61   DTPNV-----ATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  148  PNLPNEVKEFNEFQKRK----FMVKPGLTCYWQVMGRSSIGFEEWIELDLKYIKERSTFV  203
            P L    ++++ ++KR      +VKPGLT   QVMGR +   ++ ++ D  Y+ ++S  +
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  204  DLKLIFRT  211
            D+ +I++T
Sbjct  166  DMYIIYKT  173

166) Glo7428_4387 in NC_019745


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (436),  Expect = 7e-29, Method: Compositional matrix adjust.
 Identities = 76/187 (41%), Positives = 125/187 (67%), Gaps = 8/187 (4%)

Query  17   KSLIDKIAAIIALSLLSPVMLGVAIAIVTQIGQPIFFTQPRPGKDGKIFNFYKFRSM-SN  75
            K ++D ++++ A+ ++ P+++ V+IAI  +   PI F Q RPG   K+F++YKFRSM  +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  76   ACDVQGNLLPDEQRLTPIGQFLRRTSLDELPQLWNVLKGDMSIVGPRPLLVKYLERYTPE  135
            + +V  + L   + +T  G+F+R+TSLDELPQL N+LKGDM++VGPRP L    ++Y   
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYELI  118

Query  136  QSRR----HEVKPGITGLAQINGRNTLSWEERFKLDVWYVDNWSLWLDLKILALTVWKVI  191
            + R     H VKPG+TGLAQ+ GR+  + +++ + D  YV+N S+ LD+ I+  T+ + I
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  192  QREGITQ  198
              EG+++
Sbjct  179  SSEGVSH  185

167) CFF8240_1381 in NC_008599


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  119 bits (435),  Expect = 9e-29, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 129/188 (69%), Gaps = 12/188 (6%)

Query  7    KRFLDFFGSL--VLIFLTSPIMIWAYFAIKKRLGSPVIFTQNRPGLGEKIFQIYKFRTMS  64
            KR++D+F+SL  ++IFL  P+++   +AIK    +P++F Q+RPG+ +K+F+IYKFR+M 
Sbjct  2    KRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM-  58

Query  65   DEKDENGKLLSDELRLGEF----GKKLRSLSIDELPQLFNVLKGDMSFIGPRPLLIQYLP  120
              +++  ++ +D L  +++    GK +R  S+DELPQLFN+LKGDM+ +GPRP L +   
Sbjct  59   --RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYE  116

Query  121  LYNDEQKLR-HTVRPGITGLAQVNGRNGISWAKKFEYDSYYAKNLSFLMDLKIAFLTVKK  179
            L +   ++  H V+PG+TGLAQV GR+  +  +K +YD +Y  N SF +D+ I + T+K+
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  180  VIKKDGIS  187
             I  +G+S
Sbjct  177  TISSEGVS  184

168) Cseg_1547 in NC_014100


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  118 bits (432),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 129/186 (70%), Gaps = 1/186 (0%)

Query  1    MKRAFDllaaavglivlaaPMLVLWLLVRITSPGPGLYWSQRVGKGSILFPMPKFRTMRI  60
            MKR FD++++  ++I++ + ++++ + ++I S GP ++  +R G  + LF + KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DTPEVATHLLDDPDRWLTPIGPTMRKLSLDELPQLWSVLVGHMSLVGPRPALFNQDDLIA  120
            DTP+VAT+ LD P   +T  G  +RK SLDELPQL ++L G+M++VGPRPAL+NQ +LI 
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  ARKAAGVDVLRPGVTGWAQINGRDELAIPDKVALDAEYLRRRSLLFDLKILVSTVVPVLT  180
             R    V++++PG+TG AQ+ GRD+ +  +KV  D  Y+  +S+ +D+ I+  T+   ++
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  181  AKGVTR  186
            + GV++
Sbjct  180  SEGVSH  185

169) Bpro_3985 in NC_007948


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  118 bits (431),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 82/155 (53%), Positives = 110/155 (71%), Gaps = 1/155 (0%)

Query  32   SPGPVLYWSDRVGKGNRIFKMPKFRSMRMGTPAVATHLLEDPKAYLTPIGSFLRKSSLDE  91
            S GP+++  DR G  N++FK+ KFRSMR +TP VAT+ L DP  Y+T  G F+RK+SLDE
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRKTSLDE  90

Query  92   LPQLWSIIRGDMSFVGPRPALFNQHDLIALRTQYGVDKLLPGLTGWAQVNGRDELPVFQK  151
            LPQL +I++GDM+ VGPRPAL+NQ +LI  RT+  V+ + PGLTG AQV GRD+    QK
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  152  VQLDTEYVRRQSLFFDMKIIGLTFYRVIRRDSITH  186
            VQ D  YV  QS+ +DM II  T+   I  ++++H
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

170) FB2170_09936 in NC_014472


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  118 bits (432),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 131/186 (71%), Gaps = 8/186 (4%)

Query  6    IKRLIDFIASFLGLLVLSPIILIITVILSFSNKGKPFFYQRRPGKNEKIFTIIKFKTM-N  64
            +KR++D+++S+ +++++ P+++++++ + + +KG   F Q RPG ++K+F I KF++M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   DKTDAKGKLLPDKDRITRTGDFIRRTSLDEIPQLFSVLKGDMSLIGPRPLLVQYLKHYNH  124
            D  +     L   D IT+TG FIR+TSLDE+PQLF++LKGDM+++GPRP L  Y ++Y+ 
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYEL  117

Query  125  EQKQR----HLIRPGITGWAQVNGRNTITWKQKFEYDIWYVQNISFLLDCKILWLTFLKV  180
             +K+     HL++PG+TG AQV GR+  T  QK +YD  YV+N SF LD  I+  T+ + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  181  IKSDDI  186
            I S+++
Sbjct  178  ISSEGV  183

171) SIR_1781 in NC_022246


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  118 bits (429),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 129/188 (69%), Gaps = 9/188 (4%)

Query  15   KRLFDFVCSLVAIILFSWLFLIIGLLVRIKLGSPVLFKQARPGKNEKIFNMYKFRTMTDD  74
            KR+FD+  SL AII+F  L++++++ ++I   +P++FKQ RPG ++K+F++YKFR+M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  75   RDETGELLPDEIRLTSF----GKWLRSTSLDELPELFNILKGDMSFVGPRPLLVRDMVFM  130
            R++T ++  D +  + +    GK +R TSLDELP+LFNILKGDM+ VGPRP L  +  ++
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  131  TEQQR-ERHSVRQGLTGLAQINGRNNILWQDKLEWDAKYIRQITFLGDLKIILQTIHTAF  189
              +   + H V+ GLTGLAQ+ GR+N   ++K++ D  Y+ + +F  D+ II +TI  + 
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT-  177

Query  190  IKREGITD  197
            I  EG+++
Sbjct  178  ISSEGVSH  185

172) Niako_5338 in NC_016609


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  117 bits (428),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 130/188 (70%), Gaps = 8/188 (4%)

Query  8    LKRVFDFIVSLIAFGLLLPLFILVTALLYLANQGSPFFVQPRPGKNGRIFKLVKFKTM-N  66
            +KR+FD++ SL A+ ++LPL++LV+  + + ++G+  F Q RPG + ++FK+ KF++M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  67   DKKDAAGNLLSDAERLTAIGGFIRKTSLDEIPQLINVIKGEMSLIGPRPLLVEYLPLYND  126
            D  + A + L  A+ +T  G FIRKTSLDE+PQL+N++KG+M+++GPRP L +    Y+ 
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN---QYEL  117

Query  127  MQRRR----HEVRPGITGWAQVNGRNAIGWQRKFELDVWYVDHVSFTLDCKIAFFTIMKV  182
            +++R     H V+PG+TG AQV GR+    ++K + D  YV++ SF LD  I + TI + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  183  VKSEGVSQ  190
            + SEGVS+
Sbjct  178  ISSEGVSH  185

173) Weevi_0952 in NC_015144


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  117 bits (426),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 82/190 (44%), Positives = 134/190 (71%), Gaps = 14/190 (7%)

Query  6    IKRILDILVALVGLLILSPIFIIVTIGLYFANQGKPFFFQERPGLNEKIFKIIKFKTM-N  64
            +KRI+DI+ +L +++I+ P++++V+I++ + ++G   F Q+RPG+++K+FKI KF++M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   DKTDEQGKLLPDADRLTPIGAFVRKTSLDEIPQLINVLKGDMSLIGPRPLRTYYLPLYNE  124
            D  +     L  AD +T  G F+RKTSLDE+PQL+N+LKGDM+++GPRP      +LYN+
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYNQ  114

Query  125  ---EQKRR----HEVRPGITGWAQVNGRNAISWTKKFELDVFYVNNISFALDLKIFFLTI  177
                +KR     H V+PG+TG AQV GR+  +  +K + D FYV+N SF LD+ I++ TI
Sbjct  115  YELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

Query  178  KKVLVREGIA  187
            K+ +  EG++
Sbjct  175  KNTISSEGVS  184

174) RoseRS_2370 in NC_009523


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 79/197 (41%), Positives = 132/197 (68%), Gaps = 19/197 (9%)

Query  36   KRIMDLALSLLAMPIVLPLFVIIALAIKIESPGGPVIFTQNRTGKSGRRFKMYKFRTMVP  95
            KRI D+  SL A+ I LPL+ ++++AIKIES G P++F Q+R G   + FK+YKFR+M  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKG-PIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  96   NAEELKKQLAHLNELQWPDFKITNDPRVTRVGKFLRKTSLDELPQIINVIRGDMSLVGPR  155
            ++ ++       + L+ +D+       +T+ GKF+RKTSLDELPQ++N+++GDM++VGPR
Sbjct  61   DTPNVAT-----DRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  156  PTSFDASTYQL---WQTARLD-VKPGLTGLWQVYGRGNTEFDERLRLDILYIEHRCLGLD  211
            P+ ++   Y+L   +    ++ VKPGLTGL QV GR+N   D++++ D +Y+E++ + LD
Sbjct  109  PALYNQ--YELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLD  166

Query  212  IEILVRTALAVFQGRGA  228
            + I+ +T    + + G 
Sbjct  167  MYIIYKTIKNTISSEGV  183

175) M635_01325 in NC_021834


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (425),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 128/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NKEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +K  ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

176) pglC in NC_017279


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (425),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 128/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NKEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +K  ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

177) pglC in NC_002163


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (425),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 128/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NKEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +K  ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

178) pglC in NC_018521


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (425),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 128/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NKEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +K  ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

179) Cbei_4739 in NC_009617


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (425),  Expect = 5e-28, Method: Compositional matrix adjust.
 Identities = 77/184 (42%), Positives = 127/184 (70%), Gaps = 13/184 (7%)

Query  27   KRVMDILCSLIGLIILTPLFLIVGILIRLESKGSIIFSQERIGKDGNVFKMYKFRSMVAN  86
            KR+ DI+ SL ++II+ PL+++V+I I++ESKG+I+F Q+R G   ++FK+YKFRSM  +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  87   AEELKGKLCHKNEMSGPMFKMKDDPRVTKIGKFIRKTSIDELPQLFNVLKGDMSLVGPRP  146
            + ++               ++     +TK GKFIRKTS+DELPQLFN+LKGDM++VGPRP
Sbjct  62   TPNVATD------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP  109

Query  147  SLPKEVEKFDNWMMTRLE-VKPGLTCYWQVSGRNDIDFEDWMKLDIKYVRERNTLVDIKL  205
            +L ++ E ++++    ++ VKPGLT   QV GR++   ++ ++ D  YV +++  +D+ +
Sbjct  110  ALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  206  IFKT  209
            I+KT
Sbjct  170  IYKT  173

180) A911_05445 in NC_018709


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (424),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 127/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGGLLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLY  121
            R++   + +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NKEQKLR-HKVRPGITGWAQVNGRNTISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +K  ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

181) GTCCBUS3UF5_37190 in NC_016593


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 71/176 (41%), Positives = 120/176 (69%), Gaps = 8/176 (4%)

Query  2    ALIVLSPIMAATAVLVRWKLGSPVLFKQQRPGLHGKPFYLYKFRTMTDERDEKGELLPDH  61
            A+I++ P++   ++ ++    +P++FKQ+RPG+  K F +YKFR+M   R++  ++  D+
Sbjct  13   AIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDR  69

Query  62   MRLTPF----GRFLRKYSLDELPQLLNVLKGDLSLVGPRP-LLMEYLELYTPEQARRHEV  116
            +  + +    G+F+RK SLDELPQL+N+LKGD+++VGPRP L  +Y  +    +   H V
Sbjct  70   LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLV  129

Query  117  KPGITGWAQVNGRNAISWEEKFQLDVWYVDHQSFWLDVKILFLTVWKVLKSEGINH  172
            KPG+TG AQV GR+  + ++K Q D  YV++QSF LD+ I++ T+ + + SEG++H
Sbjct  130  KPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

182) VV0361 in NC_005139


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (425),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 126/184 (69%), Gaps = 2/184 (1%)

Query  2    MKRLIDFLVSLTALIMLSPVIALVAWKIRKNLGSPVLFRQTRPGLNGKSFEMVKFRTMK-  60
            MKR++D++ SL A+I++ P++ LV+  I+ +  +P++F+Q RPG++ K F + KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DAVDEQGNPLPDSERMTSFGDKLRNSSLDELPELWNVLKGEMSLVGPRP-LLMQYLPLYS  119
            D+ +   + L  ++ +T  G  +R++SLDELP+L N+LKG+M++VGPRP L  QY  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  120  TEQARRHEVRPGVTGWAQINGRNAISWEEKFKLDVWYVDNRSFWLDFKILLLTVKKVFVK  179
              +   H V+PG+TG AQ+ GR+  + ++K + D  YV+N+SF LD  I+  T+K+ +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  180  EGIS  183
            EG+S
Sbjct  181  EGVS  184

183) Hore_22910 in NC_011899


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (424),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 84/178 (48%), Positives = 123/178 (70%), Gaps = 6/178 (3%)

Query  45   KRIIDILASATGLILASPVMLLVAIAIKLDSPGPIIYSQVRVGKGGKEYLIFKFRSMVNN  104
            KRI+DI++S  ++I+  P+++LV+IAIK++S GPI++ Q R G   K + I+KFRSM ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  105  AEARTGAVWARKDDNRVTRVGKFIRKTRLDELPQLWNVLKGEMSLVGPRPERPLFVEKFE  164
            +   +         + +T+ GKFIRKT LDELPQL N+LKG+M++VGPRP  +L+ +++E
Sbjct  62   TPNVATDRLDP--ADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALY-NQYE  116

Query  165  -REHPGFKNRLLVKPGLTGLAQVNGGYDIKPHQKLRLDLLYISNQSLWLDFKIILKTI  221
              E     N  LVKPGLTGLAQV G  +   +QK++ D +Y+ NQS+ LD  II KTI
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

184) PflA506_1713 in NC_017911


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (423),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 111/167 (67%), Gaps = 2/167 (1%)

Query  18   WPVLALVAWRIKKNLGSPVLFRQVRPGLNGVPFEMIKFRTMR-DATDEQGNTLPDSERMT  76
             P+L LV+  IK +  +P++F+Q RPG++   F + KFR+MR D+ +   + L  ++ +T
Sbjct  18   LPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYIT  77

Query  77   PFGSFLRSSSLDELPGLWNVLKGDMSLVGPRP-LLMEYLPLYSPEQLRRHEVRPGLSGWA  135
              G F+R +SLDELP L N+LKGDM++VGPRP L  +Y  +    ++  H V+PGL+G A
Sbjct  78   KTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLA  137

Query  136  QVNGRNAISWEEKFKLDVWYVDNASFLLDLKIIYLTVKKVIVRDGIS  182
            QV GR+  + ++K + D  YV+N SF LD+ IIY T+K+ I  +G+S
Sbjct  138  QVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

185) TK90_1539 in NC_013889


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  116 bits (423),  Expect = 8e-28, Method: Compositional matrix adjust.
 Identities = 77/182 (43%), Positives = 121/182 (67%), Gaps = 4/182 (2%)

Query  1    MIRVLDVVLSVLGLIVAVPLMLVLWIALWWVARSPL-FRQERVGRYQRPFVLVKFRTMRP  59
            M R++D+  S+ ++I+ +PL++++ IA+   +++P+ F+Q+R G  ++ F + KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DTASVATH-LAQASSITRLGHFLRKTKLDELPQLWNVLKGEMSLVGPRPCLVSQVELIAA  118
            DT++VAT+ L  A  IT+ G F+RKT LDELPQL N+LKG+M++VGPRP L +Q ELI  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  REARGVFAVRPGITGLAQVNGIDMSDPERLAEMDAKMIE--SLTLVSYFRYLVLTVTGKG  176
            R    V  V+PG+TGLAQV G D +  ++  + D   +E  S+ L  Y+ Y  +  T  +
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  177  SG  178
             G
Sbjct  181  EG  182

186) NIDE2694 in NC_014355


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (420),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 71/155 (46%), Positives = 106/155 (69%), Gaps = 7/155 (4%)

Query  50   SPVLFRQRRPGIEGKPFTIYKFRTMRQLPPGVAADAKSDGERLTRFGKLLRSTSLDELPE  109
            +P++F+Q RPG+  K F IYKFR+MRQ  P VA+D    ++ +T+ GK++R TSLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  110  LINVIKGDMSLVGPRPLLMQYLDRYTLEQQRR----HDVLPGITGWAQVNGRNALTWEEK  165
            L+N++KGDM++VGPRP L    ++Y L ++R     H V PG+TG AQV GR+  T ++K
Sbjct  94   LFNILKGDMAVVGPRPAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  166  FDLDLWYVANHSLWVDLKILAMTAWKVIRREGIQH  200
             + D  YV N+S+ +D+ I+  T  + I  EG+ H
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

187) Hoch_5256 in NC_013440


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (420),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 67/162 (42%), Positives = 107/162 (67%), Gaps = 2/162 (1%)

Query  29   VAGLVRVRLGAPVLFRQVRPGLGGGLFTMYKFRTMR-DALDADGEPLPDEQRLTAFGKRL  87
            V+  +++   +P++F+Q RPG+   LF +YKFR+MR D+ +   + L   + +T  GK +
Sbjct  24   VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFI  83

Query  88   RESSLDELPELFNVLRGDMSLVGPRP-LLVEYLPRYSREQARRHQVKPGITGWAQIHGRN  146
            R +SLDELP+LFN+L+GDM++VGPRP L  +Y     R +   H VKPG+TG AQ+ GR+
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRD  143

Query  147  ALTWEEKFALDCWYVDHQSLLLDLYILARTLAVVVGRRGIEH  188
              T ++K   D  YV++QS+ LD+YI+ +T+   ++  G+ H
Sbjct  144  NNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

188) pglC in NC_009839


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 76/186 (41%), Positives = 127/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSLY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NEEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +   ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

189) pglC in NC_008787


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 76/186 (41%), Positives = 127/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSLY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NEEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +   ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

190) ICDCCJ07001_1079 in NC_014802


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 76/186 (41%), Positives = 127/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSLY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NEEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +   ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

191) pglC in NC_017280


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (421),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 76/186 (41%), Positives = 127/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVLLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSLY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   L 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NEEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +   ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

192) BPUM_3073 in NC_009848


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 72/155 (47%), Positives = 104/155 (68%), Gaps = 8/155 (5%)

Query  34   TPVLFRQKRPGLYGRPFMLYKFRTMTDERDEHGVLLPDHLR----LTKTGALIRKLSLDE  89
             P++F+Q RPG+  + F +YKFR+M   R++   +  D+L     +TKTG +IRK SLDE
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYITKTGKFIRKTSLDE  90

Query  90   LPQLVNVLKGELSLVGPRP-LLMEYLPMYTEEQARRHLVKPGITGWAQVNGRNTISWEEK  148
            LPQL N+LKG++++VGPRP L  +Y  +    +   HLVKPG+TG AQV GR+  + ++K
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  149  FTYDLWYVEHQSFWLDMKILWMTLLKVIKTEGVQQ  183
              YD  YVE+QSF LDM I+  T+ + I +EGV +
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

193) Amico_1717 in NC_014011


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (418),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 118/167 (71%), Gaps = 4/167 (2%)

Query  14   KRPMDFFLSLTALIILSPVLVIIGLLVRIKLGSPVIFKQERPGLNEKIFTMYKFRTMTDE  73
            KR  D+F SL A+II+ P+L ++++ ++I   +P++FKQ+RPG+++K+F +YKFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  74   KDE-NGKLLPDSTRLTTFGRILRSTSLDELPELFNVLKGDMSLVGPRP-LLPEYVPLYNK  131
              +     L  +  +T  G+++R TSLDELP+LFN+LKGDM++VGPRP L  +Y  L +K
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY-ELIEK  120

Query  132  QQRKRLSVL-PGITGWAQVNGRNALTWEEKFKLDTWYVENWNLILDL  177
            +    + ++ PG+TG AQV GR+  T ++K + D  YVEN ++ LD+
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDM  167

194) DP0030 in NC_006138


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (418),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 77/187 (42%), Positives = 126/187 (68%), Gaps = 8/187 (4%)

Query  2    IKRIFDIIASGTGLFFLLPMIIVVAWQIRKKLGSPVLFRQVRPGKDGNLFTMVKFRTMR-  60
            +KRIFDI++S  +++++LP++++V+  I+    +P++F+Q RPG   +LF + KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DAFDGSGRPLADEERLTSFGKRLRSTSLDELPGLWNVLKGDMSLVGPRPLLVEYLPLYTD  120
            D+ + +   L   + +T  GK +R TSLDELP L N+LKGDM++VGPRP L +    Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN---QYEL  117

Query  121  EQRRR----HEVRPGVSGWAQINGRNAISWEEKFQLDVWYVDNQSLWLDIKILLLTVKKV  176
             ++R     H V+PG++G AQ+ GR+  + ++K Q D  YV+NQS+ LD+ I+  T+K+ 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  177  FVREGIS  183
            +  EG+S
Sbjct  178  ISSEGVS  184

195) Mesci_4956 in NC_014923


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  115 bits (419),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 72/173 (42%), Positives = 110/173 (64%), Gaps = 1/173 (0%)

Query  5    KQIFDLAGAALLLVATSPVLALTVLAVRASSPGPAIFSQVRVGRDGRLFRCHKLRTMYVG  64
            K+IFD+ ++   ++   P+L L  +A++  S GP +F Q R G   +LF+  K+R+M  +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  65   TPSLPSHE-APADSVTSVGKVLRKFKLDELPQFWNVLKGEMSLVGPRPCLPTQTELIECR  123
            TP+++++   PAD +T  GK +RK  LDELPQ+ N+LKG+M++VGPRP L  Q ELIE R
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  124  RRLGVLAALPGITGLAQIRGIDMSNPELLAQTDAAYLRTASFWLDLRILFGTL  176
              + V    PG+TGLAQ+ G D +  +   Q D  Y+   SF LD+ I++ T+
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

196) CC_1486 in NC_002696


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  114 bits (417),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 67/155 (44%), Positives = 107/155 (70%), Gaps = 1/155 (0%)

Query  32   SPGPGLYWSQRVGRASALFPMPKFRTMRIDTPEVATHLLDNPDQWLTPIGGLMRKLSLDE  91
            S GP ++  +R G  + LF + KFR+MR DTP+VAT+ LD P + +T  G ++RK SLDE
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKTSLDE  90

Query  92   LPQLWSVLVGHMSLVGPRPALFNQDDLIAARRAAGVDALRPGVTGWAQINGRDELSIADK  151
            LPQL ++L G+M++VGPRPAL+NQ +LI  R    V+ ++PG+TG AQ+ GRD+ +  +K
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  152  VALDAEYLRRRSLLFDLRVLVSTVIPVLTARGVTR  186
            V  D  Y+  +S+ +D+ ++  T+   +++ GV++
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

197) CCNA_01553 in NC_011916


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  114 bits (417),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 67/155 (44%), Positives = 107/155 (70%), Gaps = 1/155 (0%)

Query  32   SPGPGLYWSQRVGRASALFPMPKFRTMRIDTPEVATHLLDNPDQWLTPIGGLMRKLSLDE  91
            S GP ++  +R G  + LF + KFR+MR DTP+VAT+ LD P + +T  G ++RK SLDE
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKTSLDE  90

Query  92   LPQLWSVLVGHMSLVGPRPALFNQDDLIAARRAAGVDALRPGVTGWAQINGRDELSIADK  151
            LPQL ++L G+M++VGPRPAL+NQ +LI  R    V+ ++PG+TG AQ+ GRD+ +  +K
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  152  VALDAEYLRRRSLLFDLRVLVSTVIPVLTARGVTR  186
            V  D  Y+  +S+ +D+ ++  T+   +++ GV++
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

198) CPE0493 in NC_003366


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  114 bits (416),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 130/185 (71%), Gaps = 14/185 (7%)

Query  28   KRVIDILGSGFGLIILSPLFLIVAIAIKIEDSKGRVLFSQKRVGQYGKEFNMYKFRSMVS  87
            KR++DI++S +++II+ PL+++V+IAIKIE SKG ++F Q R G   K F++YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  88   NAEELKAKLMEQNEMSGPMFKMKHDPRITKVGKFIRKTSIDELPQLINILKGEMSLVGPR  147
            ++ ++ +  ++  +             ITK GKFIRKTS+DELPQL+NILKG+M++VGPR
Sbjct  61   DTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  148  PSLPKEVAKFEPWMLERLE-VKPGLTCYWQVMGRNDIDFEDWMKLDIKYVHDRNFWLDIK  206
            P+L ++   +E +    ++ VKPGLT   QVMGR++   ++ ++ D  YV++++F LD+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  207  LIFKT  211
            +I+KT
Sbjct  169  IIYKT  173

199) Slip_0172 in NC_014220


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  114 bits (416),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 69/164 (43%), Positives = 110/164 (68%), Gaps = 8/164 (4%)

Query  9    KRVMDVLISVLGLIVFTPVIFVVALLIFMSMGRPVLFTQERPGKDGRIFRLIKFRTMTDE  68
            KR+ D++ S+ ++I+F P++F+V++ I +    P++F Q+RPG   ++F++ KFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  69   -RNAEGNLLPDEQRLTRLGRFLRSTSLDELPELFNVLKGDMSLVGPRPLLMQYLDRYTPE  127
              N   + L   + +T+ G+F+R TSLDELP+LFN+LKGDM++VGPRP L    ++Y   
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYELI  118

Query  128  QARR----HEVKPGITGWAQVNGRNAITWEEKFTLDVWYVDNWS  167
            + R     H VKPG+TG AQV GR+  T ++K   D  YV+N S
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQS  162

200) FSU_3219 in NC_017448


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  114 bits (414),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 84/186 (46%), Positives = 121/186 (66%), Gaps = 8/186 (4%)

Query  7    KRPLDFCCALAAIICLSPILVVLTILGAIKMKGNPFFTQPRPGLNEKIFKLIKFRTMTNE  66
            KR +D+  +L AII + P+L +++I   I  KG   F Q RPG+++K+FK+ KFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   KD--ANGNLLPDDVRLNAYGKFLRSTSLDELPELFNILKGDMAVIGPRPLLVKYLPYYTE  124
                A + L P D   ++ GKF+R TSLDELP+LFNILKGDMAV+GPRP L  Y  Y   
Sbjct  62   TPNVATDRLDPADYITKT-GKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--YNQYELI  118

Query  125  HERIR---HSIRPGLTGYAQAHGRNEITWERKFELDVWYVDHLTFLTDVGIIIDTVKVVL  181
            + R     H ++PGLTG AQ  GR++ T ++K + D  YV++ +F  D+ II  T+K  +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  182  SHDGVS  187
            S +GVS
Sbjct  179  SSEGVS  184

201) Fisuc_2649 in NC_013410


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  114 bits (414),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 84/186 (46%), Positives = 121/186 (66%), Gaps = 8/186 (4%)

Query  7    KRPLDFCCALAAIICLSPILVVLTILGAIKMKGNPFFTQPRPGLNEKIFKLIKFRTMTNE  66
            KR +D+  +L AII + P+L +++I   I  KG   F Q RPG+++K+FK+ KFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   KD--ANGNLLPDDVRLNAYGKFLRSTSLDELPELFNILKGDMAVIGPRPLLVKYLPYYTE  124
                A + L P D   ++ GKF+R TSLDELP+LFNILKGDMAV+GPRP L  Y  Y   
Sbjct  62   TPNVATDRLDPADYITKT-GKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--YNQYELI  118

Query  125  HERIR---HSIRPGLTGYAQAHGRNEITWERKFELDVWYVDHLTFLTDVGIIIDTVKVVL  181
            + R     H ++PGLTG AQ  GR++ T ++K + D  YV++ +F  D+ II  T+K  +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  182  SHDGVS  187
            S +GVS
Sbjct  179  SSEGVS  184

202) Sgly_1515 in NC_015172


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  114 bits (414),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 78/179 (44%), Positives = 125/179 (70%), Gaps = 7/179 (3%)

Query  55   LKRLLDLAVSLNGLLILFFPML-LIGVWIKLDSEGPALFTQERLGLNGKPFRLFKFRSMR  113
            +KR++D+  SL +++I F+P+L L+++ IK++S GP +F Q+R G++ K F+++KFRSMR
Sbjct  1    MKRIFDIFSSLYAIII-FLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  114  IDAEADGPRWASKEDDRLTRVGRLIRKTRLDELPQLLNILTGHMSLVGPRPERKIFYDQF  173
             D+   +  +     D +T+ G++IRKT LDELPQL+NIL G+M++VGPRP    +Y+Q+
Sbjct  60   QDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA---LYNQY  115

Query  174  ETYIHGFHQRL-MVKPGLTGLAQVNGGYDLLPEEKILLDVEYMKNQSLVLDIQLILKTV  231
            E      +  + +VKPGLTGLAQV G  +   ++K+  D  Y+ NQS+ LD+ +I KT+
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

203) LEUM_1433 in NC_008531


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  113 bits (413),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 74/161 (46%), Positives = 112/161 (70%), Gaps = 1/161 (0%)

Query  30   VGMIIKLTSKGPILFMQERYGINSEPFMLYKFRSMTNEAPIKANSEFNDITSYITPFGMF  89
            V++ IK+ SKGPI+F Q+R G+++  F +YKFRSM +++P +  ++  D + YIT  G F
Sbjct  24   VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRLDPADYITKTGKF  82

Query  90   IRKTSIDELPQLWNVLKGDMSIVGPRALASTDRLVLDLRKQNGADKVRPGITGLAQINGR  149
            IRKTS+DELPQL N+LKGDM++VGPR+    +  +++ R +   + V+PG+TGLAQ+ GR
Sbjct  83   IRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGR  142

Query  150  NNITDTEKANYDAKYVKNVSCKHDFMILVVTFFSVVKREGI  190
            +N TD +K +YD  YV N S K D  I+  T+ + +  EG+
Sbjct  143  DNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

204) cpsE1 in NC_020291


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  113 bits (412),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 79/184 (43%), Positives = 124/184 (68%), Gaps = 13/184 (7%)

Query  27   KRMMDIICSLIGLIALVPIFLIVAVAIKIESKGPIVFIQKRVGKDGKTFGIYKFRSMVVN  86
            KR+ DI+ SL ++I ++P++++V++AIKIESKGPIVF Q R G   K F IYKFRSM  +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  87   AEELKDKLSDKNEISGPMFKMKEDPRVTKVGKFIRKTSIDELPQLINVLRGEMSLVGPRP  146
            + ++               ++     +TK GKFIRKTS+DELPQL+N+L+G+M++VGPRP
Sbjct  62   TPNVATD------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP  109

Query  147  SLPDEVMKFENWMMQRLS-VKPGLTCYWQVSGRNDIGFREWMRLDIKYVEERSLLVDIQL  205
            +L ++   +E++    +  VKPGLT   QV GR++    + ++ D  YVE++S+ +D+ +
Sbjct  110  ALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  206  IFKT  209
            I+KT
Sbjct  170  IYKT  173

205) HMPREF0659_A5895 in NC_014370


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  113 bits (411),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 79/184 (43%), Positives = 122/184 (67%), Gaps = 3/184 (1%)

Query  7    KRCFDIVLSLLAIICISPILIVFSILLYFANNGAGVFFFQPRPGYKGKIFKVIKFKTM-N  65
            KR FDI  SL AII + P+L++ SI + + ++G+ VF  Q RPG K K+FK+ KF++M +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFK-QDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DNKGPDGNLLPDTQRITRIGKFVRNSSIDELPQFFNVLKGDMSLIGPRPLL-VKYLPLYT  124
            D      + L  ++ IT+ GKF+R++S+DELPQ+FN+LKGDM+++GPRP L  +Y  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  125  SEQMRRHDVLPGITGWAQCHGRNAMTWKEKFEYDVWYVDHISFVTDMKVIWFSIRAVLCR  184
              ++  H V PG+TG AQ  GR+  T  +K +YD  YV++ SF  DM +I  +I+  +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  185  EGIN  188
            EG++
Sbjct  181  EGVS  184

206) ELI_1800 in NC_014624


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  113 bits (411),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 74/164 (46%), Positives = 118/164 (72%), Gaps = 6/164 (3%)

Query  8    IKRAFDIVSSGILIVLLTPFWIGISIAIKKDSEGPILFKQERRTKEGRVFQMYKFRSMVV  67
            +KR FDI SS   I+++ P+ + +SIAIK +S GPI+FKQ+R     ++F++YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  68   NAEKMGAGLFNYENDPRVTKVGRMLRDSSLDELPQLFNIFKGDMSVVGPRPCVTYELGDF  127
            ++ +++++    +    +TK G+ +R +SLDELPQLFNI+KGDM+VVGPRP + Y+  ++
Sbjct  61   DTPNVATD--RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL-YN--QY  115

Query  128  ETLNKKYRKRFE-VKAGLTGWAQIKGRNDISWDKKVTYDNEYVD  170
            E ++K+     + VK+GLTG AQ+ GR++ + D+KV YD+ YV+
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVE  159

207) Desor_5142 in NC_016584


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  113 bits (411),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 74/173 (43%), Positives = 114/173 (66%), Gaps = 6/173 (3%)

Query  23   IVAAPIMLCAAIAIKLGSRGPVLFKQERPGKDGVIFTIYKFRTMRLEREK-DGRPLADME  81
            I+  P+++  +IAIK+ S+GP++FKQ+RPG    +F IYKFR+MR +  +     L   +
Sbjct  15   IIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPAD  74

Query  82   RLTLVGGILRKLSVDELPQLFNILKGDMSFIGPRP-LMVQY--LERYTPEQMRRHEVTPG  138
             +T  G ++RK S+DELPQLFNILKGDM+ +GPRP L  QY  +E+    ++  H V PG
Sbjct  75   YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK--RTNVNVHLVKPG  132

Query  139  ISGWAQIHGRNQVGWETRFKYDVWYVEHISFWLDLKIFLKTLAIVLIRRGVNQ  191
            ++G AQ+ GR++   + + +YD  YVE+ SF LD+ I+ KT+   +   GV++
Sbjct  133  LTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

208) SpiBuddy_0367 in NC_015152


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  113 bits (411),  Expect = 7e-27, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 120/164 (74%), Gaps = 6/164 (3%)

Query  6    IKRLFDIVGSFLALVFLLPVWIVIPIAIKLDSRGPVFFRQKRLTKDGRIFEMYKFRSMIV  65
            +KR+FDI +S+ A++++LP+ ++++IAIK++S+GP+ F+Q R     ++F +YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   NAEIMDAGLFNFENDPRVTRLGRFLRNCSIDELPQLMNILKGDMAIIGPRPSVVYELGEF  125
            ++  + ++   ++    +T+ G+F+R+ S+DELPQL NILKGDMA++GPRP+ +Y+  ++
Sbjct  61   DTPNVATD--RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA-LYN--QY  115

Query  126  GTLNKKYKKRFSM-KAGLTGLAQVKGRNDINWDEKVTLDNQYID  168
              ++K+ +    + K+GLTGLAQV GR++   D+KV  D+ Y++
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVE  159

209) Ftrac_0334 in NC_014759


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  113 bits (411),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 76/183 (42%), Positives = 126/183 (69%), Gaps = 2/183 (1%)

Query  7    KPFFDRITALIALIIASPIFVLVSFLLAIFQSGKVFFTQKRPGLNEEIFLLIKFKTMRDD  66
            K +FD +++L A+II  P++ LVS+ + I   G + F Q RPG+++ +F + KF++MR+D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   -QDENGELLPDEQRLTWIGKIVRKTSMDEIPQLLNIIKGDMSFIGPRPLL-VEYLPLYSE  124
              +   + L   + +T  GK++RKTS+DE+PQL+NI+KGDM+ +GPRP L  +Y  +   
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  125  EQRKRHFVTPGITGWAQINGRNTISWQKKFEYDVWYVQNQSFLLDIKIIFMTVLKVFKAE  184
             + + H+V PG+TG AQ+ GR+  + ++K +YD  YV+NQSF LD+ II+ T+ + + +E
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  185  GIS  187
            G+S
Sbjct  182  GVS  184

210) MARHY2534 in NC_017067


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  113 bits (410),  Expect = 8e-27, Method: Compositional matrix adjust.
 Identities = 77/190 (41%), Positives = 129/190 (68%), Gaps = 16/190 (8%)

Query  1    MIRLLDIWIAFVGLIVGFPIMVLLYLVGL---LDTGSPI-FVQERVGRHGKPFRLVKFRT  56
            M R++DI  ++ ++I+   ++ LL+LV++   +++ +PI F Q+R G   K F++ KFR+
Sbjct  1    MKRIFDIFSSLYAIII---FLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRS  57

Query  57   MRKTAASVAT-HLANVDDITRFGRFLRGSKLDELPQLWNVLKGDMSLVGPRPCLFSQQEL  115
            MR+ +++VAT +L   D IT+ G+F+R + LDELPQL N+LKGDM++VGPRP L++Q EL
Sbjct  58   MRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL  117

Query  116  IQEREKRGVLDARPGITGLAQVSGIDMSTPELLAKTDSEML----QSLSVGKYFAY--II  169
            I+ R +  V   +PG+TGLAQV G D +T +   K + + +    QS+ ++ Y+ Y  I 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD--QKVQYDKFYVENQSFKLDMYIIYKTIK  175

Query  170  QTVSGKGAGD  179
            +T+S+ G ++
Sbjct  176  NTISSEGVSH  185

211) GM18_1456 in NC_014973


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 68/154 (45%), Positives = 105/154 (69%), Gaps = 8/154 (5%)

Query  35   PVLFRQARPGLQGRPFVLIKLRSM-TDRRDKAGDLLPDAERLTWLGNFLRKSSLDELPEL  93
            P++F+Q RPG++ + F + K+RSM  D  + A D L  A+ +T  G+F+RK+SLDELP+L
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  94   FNVLKGEMSLVGPRPLLMEYLDRYTSEQARR----HEVRPGITGWAQVNGRNSIGWDEKF  149
            FN+LKG+M++VGPRP L    ++Y   + R     H V+PG+TG AQV GR++   D+K 
Sbjct  95   FNILKGDMAVVGPRPAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  RLDVWYVDNQSFWLDLKILWLTLRKVSCCDGVNQ  183
            + D  YV+NQSF LD+ I+  T+++    +GV++
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

212) CPF_0466 in NC_008261


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 131/185 (71%), Gaps = 14/185 (7%)

Query  28   KRLIDILGASFGLIILSPVFLIVAIAIKIEDSKGSVLFSQKRVGQYGKEFNMYKFRSMVS  87
            KR++DI+++ +++II+ P++++V+IAIKIE SKG+++F Q R G   K F++YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  88   NAEELKAKLMEKNEMSGPMFKMKHDPRITKVGKFIRKTSIDELPQLINILKGEMSLVGPR  147
            ++ ++ +  ++  +             ITK GKFIRKTS+DELPQL+NILKG+M++VGPR
Sbjct  61   DTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  148  PSLPKEVAKFEPWMLERLE-VKPGLTCYWQVMGRNDIDFEDWMKLDIKYVHDRNFWLDIK  206
            P+L ++   +E +    ++ VKPGLT   QVMGR++   ++ ++ D  YV++++F LD+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  207  LIFKT  211
            +I+KT
Sbjct  169  IIYKT  173

213) Halha_2389 in NC_019978


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  112 bits (408),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 81/192 (43%), Positives = 127/192 (67%), Gaps = 14/192 (7%)

Query  34   IKRIVDIVVSIVGLAITAPIMLLATIAIKLESPGPIIFKQTRLGKNGQEFTIYKFRSMVK  93
            +KRI DI  S+ ++ I  P+++L +IAIK+ES GPI+FKQ R G + + F IYKFRSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM-R  59

Query  94   NAEKNTGAVWAKKNDARVTNVGRFIRKTRIDELPQFINILKGEMTLVGPRPERPSLTDEF  153
            +   N ++ +    D  +T+ G+FIRKT +DELPQ++NILKG+M++VGPRP        +
Sbjct  60   QDTPNVATDRLDPADY-ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP-------AL  111

Query  154  HQQYPGFKNRL-----LVTPGVTGLAQIKGGYDITPGQKYRLDKLYIKRRNLLLDIEIMF  208
             +QY  + +R      LV PG+TGLAQ+ G  + T +QK + DK+Y+  +++ LD+ I++
Sbjct  112  YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  209  RTALVMIIGDGA  220
            +T    I ++G 
Sbjct  172  KTIKNTISSEGV  183

214) pglC in NC_003912


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  112 bits (408),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 127/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVFLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSFY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   + 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NEEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +   ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

215) CJS3_1170 in NC_017281


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  112 bits (408),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 127/186 (69%), Gaps = 9/186 (4%)

Query  7    KRIFDFILALVFLVLFSPVILITALLLKI-TQGSVIFTQNRPGLDEKIFKIYKFKTMSDE  65
            KRIFD++ +L  +++F P++++ ++ +KI ++G+++F Q+RPG+ +K+FKIYKF++M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  66   RDEKGELLSDELRLKAF----GKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSFY  121
            R++  ++ +D L    +    GK++R  SLDEL QLFN+LKGDM+ VGPRP L +   + 
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  122  NEEQKLR-HKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL  180
            +   ++  H V+PG+TG AQV GR+  + ++K + D +YV N SF LD+ I++ T  + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  181  KRSGVS  186
               GVS
Sbjct  179  SSEGVS  184

216) Chro_1199 in NC_019695


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  112 bits (408),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 73/181 (41%), Positives = 121/181 (67%), Gaps = 8/181 (4%)

Query  18   FVAAIALIVLSPIVICVAIAIHFRMGSPVIFTQPRPGKDGNIFNFYKFRTMTDE-QDTQG  76
            F +  A+I++ P+++ V+IAI +   +P++F Q RPG   ++F++YKFR+M ++  +   
Sbjct  8    FSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVAT  67

Query  77   NLLPDEQRLTTFGQFLRQTSLDELPQLWNVLKGDMSFIGPRPLLVKYLDRYTTEQARR--  134
            + L   + +T  G+F+R+TSLDELPQL N+LKGDM+ +GPRP L  Y ++Y   + R   
Sbjct  68   DRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYELIEKRTNV  124

Query  135  --HEVKPGITGLAQINGRNAITWEEKFVLDVWYVDNWSLWLDLKILFLTVFKVLQQEGIN  192
              H VKPG+TGLAQ+ GR+  T ++K   D  YV+N S+ LD+ I++ T+ + +  EG++
Sbjct  125  NVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

Query  193  Q  193
            +
Sbjct  185  H  185

217) Desku_1737 in NC_015573


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  112 bits (409),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 75/187 (41%), Positives = 128/187 (69%), Gaps = 10/187 (5%)

Query  6    KRLMDFIGAVVGLALLAPVMLLIALFICLNMGRPVLFRQVRPGLHGRPFVIYKFRTMKEE  65
            KR+ D+++++ ++ ++ P+++L+++ I ++   P++F+Q RPG+  + F IYKFR+M+++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  66   RDSRGN--LLPDELRLTRLGRFLRSTSLDELPELFNVLKGDMSLVGPRPLLMEYLERYTP  123
              + +   L P +  +T+ G+F+R TSLDELP+LFN+LKGDM++VGPRP L  Y ++Y  
Sbjct  62   TPNVATDRLDPADY-ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYEL  117

Query  124  EQARR----HEVKPGITGWAQVNGRNAITWEEKFKLDVWYVDNWSLWLDFKILGSTFLKV  179
             + R     H VKPG+TG AQV GR+  T ++K + D  YV+N S+ LD  I+  T+ + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  180  LRREGIS  186
            +  EG+S
Sbjct  178  ISSEGVS  184

218) Mahau_0047 in NC_015520


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 73/154 (48%), Positives = 110/154 (72%), Gaps = 10/154 (6%)

Query  27   PVIFKQKRPGLNERIFTLYKFRTMTDDKDE--NGHLLPDEVRLTKFGKFLRSTSIDELPE  84
            P++FKQ RPG+++++F +YKFR+M +D  +   ++L P +  +TK GKF+R TS+DELP+
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-ITKTGKFIRKTSLDELPQ  93

Query  85   LFNILKGDMSIVGPRPLLVQYLPLYDAHQRRR----HEVRPGLTGLAQVSGRNAISWEDR  140
            LFNILKGDM++VGPRP L  Y   Y+  ++R     H V+PGLTGLAQV GR+  + +++
Sbjct  94   LFNILKGDMAVVGPRPAL--Y-NQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  141  FNLDVQYVDNVSFINDWKIIFLTVKKVFAREGIS  174
             + D  YV+N SF  D  II+ T+K+ ++ EG+S
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

219) HMPREF0409_01488 in NC_021281


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 66/152 (44%), Positives = 111/152 (74%), Gaps = 2/152 (1%)

Query  39   SPVIFRQKRPGLNEKIFTMYKFRTMTDEKDK-EGNLLSDKDRLTKFGKFLRSTSLDEIPE  97
            +P++F+Q RPG+++K+F +YKFR+M ++  +   + L   D +TK GKF+R TSLDE+P+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  98   LWNVIKGEMSLVGPRPLM-PKYLAYYTKSEKRRHEVKPGITGWAQVNGRNSLTWEDKFRY  156
            L N++KG+M++VGPRP +  +Y     +++   H VKPG+TG AQV GR++ T ++K +Y
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  157  DIEYVNSISFWLDLKIIFITIKKVFNRQDISD  188
            D  YV++ SF LD+ II+ TIK+ ++ +++S+
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

220) BJAB0715_00110 in NC_021733


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (405),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/187 (43%), Positives = 123/187 (66%), Gaps = 8/187 (4%)

Query  2    MKRIVDIVISLTALIILSPIFIWVAYKVRKNLGSPVFFYQERPGKDGKLFKMIKFRSMK-  60
            MKRI DI  SL A+II+ P+++ V+  ++ +  +P+ F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DAFDAQGNPLPDEERITPFGHKLRSTTLDEMPQLINVLKGDMSIVGPRPQLADFLEHYTS  120
            D+ +   + L   + IT  G  +R T+LDE+PQL+N+LKGDM++VGPRP L    ++Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYEL  117

Query  121  RQMRR----HEVRPGMTGLAQVSGRNNLSWEEKFELDIEYVETHNLSLDFKIMMKTVLVM  176
             + R     H V+PG+TGLAQV GR+N + ++K + D  YVE +++ LD  I+ KT+   
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  177  LKKEGIN  183
            +  EG++
Sbjct  178  ISSEGVS  184

221) weeH in NC_020547


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (405),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/187 (43%), Positives = 123/187 (66%), Gaps = 8/187 (4%)

Query  2    MKRIVDIVISLTALIILSPIFIWVAYKVRKNLGSPVFFYQERPGKDGKLFKMIKFRSMK-  60
            MKRI DI  SL A+II+ P+++ V+  ++ +  +P+ F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DAFDAQGNPLPDEERITPFGHKLRSTTLDEMPQLINVLKGDMSIVGPRPQLADFLEHYTS  120
            D+ +   + L   + IT  G  +R T+LDE+PQL+N+LKGDM++VGPRP L    ++Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYEL  117

Query  121  RQMRR----HEVRPGMTGLAQVSGRNNLSWEEKFELDIEYVETHNLSLDFKIMMKTVLVM  176
             + R     H V+PG+TGLAQV GR+N + ++K + D  YVE +++ LD  I+ KT+   
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  177  LKKEGIN  183
            +  EG++
Sbjct  178  ISSEGVS  184

222) ABTJ_03748 in NC_017847


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (405),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/187 (43%), Positives = 123/187 (66%), Gaps = 8/187 (4%)

Query  2    MKRIVDIVISLTALIILSPIFIWVAYKVRKNLGSPVFFYQERPGKDGKLFKMIKFRSMK-  60
            MKRI DI  SL A+II+ P+++ V+  ++ +  +P+ F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DAFDAQGNPLPDEERITPFGHKLRSTTLDEMPQLINVLKGDMSIVGPRPQLADFLEHYTS  120
            D+ +   + L   + IT  G  +R T+LDE+PQL+N+LKGDM++VGPRP L    ++Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYEL  117

Query  121  RQMRR----HEVRPGMTGLAQVSGRNNLSWEEKFELDIEYVETHNLSLDFKIMMKTVLVM  176
             + R     H V+PG+TGLAQV GR+N + ++K + D  YVE +++ LD  I+ KT+   
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  177  LKKEGIN  183
            +  EG++
Sbjct  178  ISSEGVS  184

223) ABZJ_00092 in NC_017171


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (405),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/187 (43%), Positives = 123/187 (66%), Gaps = 8/187 (4%)

Query  2    MKRIVDIVISLTALIILSPIFIWVAYKVRKNLGSPVFFYQERPGKDGKLFKMIKFRSMK-  60
            MKRI DI  SL A+II+ P+++ V+  ++ +  +P+ F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DAFDAQGNPLPDEERITPFGHKLRSTTLDEMPQLINVLKGDMSIVGPRPQLADFLEHYTS  120
            D+ +   + L   + IT  G  +R T+LDE+PQL+N+LKGDM++VGPRP L    ++Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYEL  117

Query  121  RQMRR----HEVRPGMTGLAQVSGRNNLSWEEKFELDIEYVETHNLSLDFKIMMKTVLVM  176
             + R     H V+PG+TGLAQV GR+N + ++K + D  YVE +++ LD  I+ KT+   
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  177  LKKEGIN  183
            +  EG++
Sbjct  178  ISSEGVS  184

224) PADK2_08600 in NC_018080


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 124/184 (68%), Gaps = 2/184 (1%)

Query  2    IKRLFDIVASllgllllSPVILFVAWQIRRKLGKPVLFRQVRPGVGGHPFEMIKFRTMR-  60
            +KR+FDI +SL +++++ P++++V+  I+     P++F+Q RPGV    F + KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DAVDANGNALPDVERMTPFGNFLRSTSLDELPELWNVLKGDMSLVGPRP-LLMEYLPLYS  119
            D+ +   + L   + +T  G+F+R TSLDELP+L N+LKGDM++VGPRP L  +Y  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  120  VEQYRRHELRPGVTGWAQVNGRNALSWEEKFELDVWYVDNRSFWLDLKIILMTLKKVFVR  179
              +   H ++PG+TG AQV GR+  + ++K + D  YV+N+SF LD+ II  T+K+ +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  180  EGIS  183
            EG+S
Sbjct  181  EGVS  184

225) M062_16825 in NC_021577


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 124/184 (68%), Gaps = 2/184 (1%)

Query  2    IKRLFDIVASllgllllSPVILFVAWQIRRKLGKPVLFRQVRPGVGGHPFEMIKFRTMR-  60
            +KR+FDI +SL +++++ P++++V+  I+     P++F+Q RPGV    F + KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DAVDANGNALPDVERMTPFGNFLRSTSLDELPELWNVLKGDMSLVGPRP-LLMEYLPLYS  119
            D+ +   + L   + +T  G+F+R TSLDELP+L N+LKGDM++VGPRP L  +Y  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  120  VEQYRRHELRPGVTGWAQVNGRNALSWEEKFELDVWYVDNRSFWLDLKIILMTLKKVFVR  179
              +   H ++PG+TG AQV GR+  + ++K + D  YV+N+SF LD+ II  T+K+ +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  180  EGIS  183
            EG+S
Sbjct  181  EGVS  184

226) C248_0118 in NC_018608


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  43   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  100
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  101  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  160
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  161  FSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  214
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  215  SIRTLMVVITGEG  227
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

227) SAAG_00612 in NC_022113


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  43   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  100
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  101  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  160
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  161  FSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  214
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  215  SIRTLMVVITGEG  227
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

228) ST398NM01_0143 in NC_017673


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  43   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  100
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  101  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  160
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  161  FSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  214
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  215  SIRTLMVVITGEG  227
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

229) SAA6008_00107 in NC_017341


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  43   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  100
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  101  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  160
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  161  FSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  214
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  215  SIRTLMVVITGEG  227
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

230) HMPREF0772_10369 in NC_017342


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  43   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  100
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  101  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  160
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  161  FSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  214
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  215  SIRTLMVVITGEG  227
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

231) SATW20_01400 in NC_017331


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  43   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  100
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  101  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  160
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  161  FSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  214
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  215  SIRTLMVVITGEG  227
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

232) CCV52592_1211 in NC_009715


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (406),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 75/183 (41%), Positives = 118/183 (65%), Gaps = 2/183 (1%)

Query  7    KRFLDILGAIFLIVLTLPFMVVTAIFIYFKISRDVVFTQARPGLHAQIFKIYKFKTMSDE  66
            KR++DI+++++ I++ LP++ + +I I +     +VF Q RPG+  ++FKIYKF++M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   -RGADGELLPDEMRLNRFGKLIRSLSLDELPQLFNVLKGDMSFIGPRPLL-IEYLPLYTP  124
                  + L     + + GK+IR  SLDELPQLFN+LKGDM+ +GPRP L  +Y  +   
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  125  EQATRHDVRPGITGLAQVNGRNAISWAKKFEYDAQYVRELSFALDVKIALLTIQKVLKRS  184
             +   H V+PG+TGLAQV GR+  +  +K +YD  YV + SF LD+ I   TI++ +   
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  185  GVS  187
            GVS
Sbjct  182  GVS  184

233) MC28_2849 in NC_018693


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 73/160 (46%), Positives = 116/160 (73%), Gaps = 6/160 (3%)

Query  28   VKTQIGSPILFRQQRPGLHGKPFYLYKFRTMTNERDN-SGELL--PDYARLTKVGKILRK  84
            +K +  +PI+F+Q+RPG+  K F +YKFR+M ++  N + + L  +DY  +TK GK++RK
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY--ITKTGKFIRK  85

Query  85   YSLDELPQLINVLKGQLSLVGPRP-LLMEYMPLYSQEQAKRHNVKPGITGWAQINGRNSI  143
             SLDELPQL+N+LKG++++VGPRP L  +Y  +  + + + H VKPG+TG AQ+ GR++ 
Sbjct  86   TSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNN  145

Query  144  SWDEKFKLDVWYVENQSFLLDLKILYLTFSKVLKSEGITN  183
            + D+K + D  YVENQSF LD+ I+Y T+ + + SEG+++
Sbjct  146  TDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

234) SELR_17370 in NC_017068


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 72/165 (44%), Positives = 125/165 (76%), Gaps = 6/165 (3%)

Query  12   LKRIFDICSAGITlllllplFVVIAIAIKLDSEGPVIFSQGRRTKNGKIFQMYKFRSMVV  71
            +KRIFDI S+  +++++LPL+ +++IAIK++S GP++F Q+R   + K+F++YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  72   NAEKVGTGLFNYENDPRVTKVGRFLRNSSLDELPQLFNVFKGDISVVGPRPCVTYELGDY  131
            ++ +V+T+    +    +TK G+F+R++SLDELPQLFN++KGD++VVGPRP + Y+  +Y
Sbjct  61   DTPNVATD--RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL-YN--QY  115

Query  132  ETLNKKYKKRFTVI-GGITGLAQARGRNENSWDEKVTLDNQYIDE  175
            E ++K+ +    ++  G+TGLAQ  GR++N+ D+KV  D+ Y+++
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVEN  160

235) CLH_3210 in NC_010723


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 77/186 (42%), Positives = 125/186 (68%), Gaps = 15/186 (8%)

Query  29   LKRAIDIICSLVGLIVLSPVLLITAICIKIESKGSVIFSQTRIGINGEKFNMYKFRSMVV  88
            +KR +DI+ SL ++I++ P+L++ +I IKIESKG+++F Q R G++   F++YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  89   NAeelkkklkekNEMNGPMFKIKDDPRVTKIGKFIRKTSLDELPQLVNVLKGEMSLVGPR  148
            ++          + ++ + +       +TK GKFIRKTSLDELPQL N+LKG+M++VGPR
Sbjct  61   DT-----PNVATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  149  PSL--ECEVIHFEDWMKKRLYVKPGLTCYWQVSGRNDIGFKEWMELDVKYVEERNTLTDI  206
            P+L  + E+I+    ++ +L VKPGLT   QV GR++    + ++ D  YVE+++   D+
Sbjct  109  PALYNQYELIEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDM  167

Query  207  KLIFKT  212
             +I+KT
Sbjct  168  YIIYKT  173

236) PSE_2935 in NC_016642


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 70/167 (42%), Positives = 114/167 (69%), Gaps = 8/167 (4%)

Query  1    MIIAAILVRTRLGSPIIFKQDRAGLNGDVFQIYKFRSM-SDARDAHGNLLPDDQRLTTFG  59
            +++ +I ++    +PI+FKQDR+G++  +F+IYKFRSM  D+ +   + L   + +T  G
Sbjct  21   LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTG  80

Query  60   RILRATSVDELPGFLNVLKGEMSVVGPRPQHAGFLKHYS----KRQMMRHFVKPGITGWA  115
            +++R TS+DELP ++N+LKG+M+VVGPRP   ++ ++Y     + ++  H+VKPG+TG A
Sbjct  81   KFIRKTSLDELPQLFNILKGDMAVVGPRP---ALYNQYELIEKRTNVNVHLVKPGLTGLA  137

Query  116  QVNGRNNIDWDSRFELDVWYVENKSFWLDMKIIFMTMIIVLKREGIS  162
            QV GR+N   D + + D  YVEN+SF LDM II+ T+   +  EG+S
Sbjct  138  QVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

237) SA2981_0130 in NC_017340


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  44   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  101
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  102  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  161
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  162  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  215
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  216  SIRTLMVVITGEG  228
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

238) SABB_05546 in NC_021670


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  30   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  87
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  88   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  147
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  148  FSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  201
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  202  SIRTLMVVITGEG  214
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

239) ECTR2_85 in NC_017343


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

240) SAAV_0097 in NC_013450


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  44   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  101
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  102  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  161
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  162  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  215
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  216  SIRTLMVVITGEG  228
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

241) SaurJH1_0120 in NC_009632


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  44   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  101
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  102  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  161
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  162  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  215
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  216  SIRTLMVVITGEG  228
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

242) SaurJH9_0115 in NC_009487


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

243) SAR0131 in NC_002952


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  43   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  100
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  101  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  160
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  161  FSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  214
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  215  SIRTLMVVITGEG  227
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

244) SAHV_0128 in NC_009782


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  44   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  101
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  102  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  161
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  162  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  215
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  216  SIRTLMVVITGEG  228
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

245) SAV0129 in NC_002758


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  44   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  101
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  102  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  161
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  162  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  215
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  216  SIRTLMVVITGEG  228
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

246) SA0124 in NC_002745


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (404),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  44   IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  101
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  102  CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  161
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  162  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  215
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  216  SIRTLMVVITGEG  228
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

247) SAI1T1_2000840 in NC_020529


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

248) SAI2T2_1000840 in NC_020564


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

249) SAI3T3_1000840 in NC_020532


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

250) SAI4T8_1000840 in NC_020533


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

251) SAI7S6_1000840 in NC_020537


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

252) SAI5S5_1000840 in NC_020566


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

253) SAI6T6_1000840 in NC_020536


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

254) SAI8T7_1000840 in NC_020568


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 131/193 (68%), Gaps = 19/193 (9%)

Query  8    IKRAIDL--VLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSM  65
            +KR +D+   L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM
Sbjct  1    MKRIFDIFSSLYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  66   CKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVEL  125
             +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L
Sbjct  59   RQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------AL  111

Query  126  FSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYI  179
            ++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI
Sbjct  112  YNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYI  169

Query  180  SIRTLMVVITGEG  192
              +T+   I++EG
Sbjct  170  IYKTIKNTISSEG  182

255) capM2 in NC_022222


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 130/191 (69%), Gaps = 15/191 (7%)

Query  44   IKRAIDLVLSIVLLCLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCK  103
            +KR +D+  S+  + + +P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  104  NAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFS  163
            ++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L++
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYN  113

Query  164  S-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISI  217
              E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI  
Sbjct  114  QYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  218  RTLMVVITGEG  228
            +T+   I++EG
Sbjct  172  KTIKNTISSEG  182

256) SAOV_0077 in NC_017337


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 130/191 (69%), Gaps = 15/191 (7%)

Query  44   IKRAIDLVLSIVLLCLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCK  103
            +KR +D+  S+  + + +P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  104  NAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFS  163
            ++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L++
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYN  113

Query  164  S-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISI  217
              E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI  
Sbjct  114  QYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  218  RTLMVVITGEG  228
            +T+   I++EG
Sbjct  172  KTIKNTISSEG  182

257) SAA6159_00112 in NC_017338


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 130/191 (69%), Gaps = 15/191 (7%)

Query  44   IKRAIDLVLSIVLLCLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCK  103
            +KR +D+  S+  + + +P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  104  NAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFS  163
            ++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L++
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYN  113

Query  164  S-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISI  217
              E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI  
Sbjct  114  QYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  218  RTLMVVITGEG  228
            +T+   I++EG
Sbjct  172  KTIKNTISSEG  182

258) M013TW_0119 in NC_016928


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 130/191 (69%), Gaps = 15/191 (7%)

Query  8    IKRAIDLVLSIVLLCLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCK  67
            +KR +D+  S+  + + +P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  68   NAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFS  127
            ++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L++
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYN  113

Query  128  S-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISI  181
              E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI  
Sbjct  114  QYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  182  RTLMVVITGEG  192
            +T+   I++EG
Sbjct  172  KTIKNTISSEG  182

259) SA40_0096 in NC_022443


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 130/191 (69%), Gaps = 15/191 (7%)

Query  8    IKRAIDLVLSIVLLCLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCK  67
            +KR +D+  S+  + + +P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  68   NAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFS  127
            ++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L++
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYN  113

Query  128  S-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISI  181
              E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI  
Sbjct  114  QYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  182  RTLMVVITGEG  192
            +T+   I++EG
Sbjct  172  KTIKNTISSEG  182

260) SA957_0111 in NC_022442


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  111 bits (403),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 130/191 (69%), Gaps = 15/191 (7%)

Query  8    IKRAIDLVLSIVLLCLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCK  67
            +KR +D+  S+  + + +P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  68   NAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFS  127
            ++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L++
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYN  113

Query  128  S-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISI  181
              E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI  
Sbjct  114  QYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  182  RTLMVVITGEG  192
            +T+   I++EG
Sbjct  172  KTIKNTISSEG  182

261) ABTW07_0095 in NC_017387


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (402),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 123/184 (67%), Gaps = 2/184 (1%)

Query  5    MKRLVDIVISLIALTVLSPIFLIVAYKVRKNLGSPIFFYQERPGKDGKLFKMIKFRSMK-  63
            MKR+ DI  SL A+ ++ P++++V+  ++ +  +PI F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  64   DTFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML-KDFVALYS  122
            DT +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L +++  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  123  PEQARRLEVRPGMTGLAQVSGRNELDYEERFKCDVWYVDNHNVWVDFKIMFKTVKVMLKR  182
              +     V+PG+TGLAQV GR++   +++ + D  YV+N++  +D  I++KT+K  +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  183  EGIN  186
            EG++
Sbjct  181  EGVS  184

262) M3Q_297 in NC_018706


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (402),  Expect = 3e-26, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 123/184 (67%), Gaps = 2/184 (1%)

Query  1    MKRLVDIVISLIALTVLSPIFLIVAYKVRKNLGSPIFFYQERPGKDGKLFKMIKFRSMK-  59
            MKR+ DI  SL A+ ++ P++++V+  ++ +  +PI F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DAFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML-KDFVALYS  118
            D+ +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L +++  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  PEQARRLEVRPGMTGLAQVSGRNELDYEERFKCDVWYVDNHSVWVDFKIMFKTVKVMLKR  178
              +     V+PG+TGLAQV GR++   +++ + D  YV+N+S  +D  I++KT+K  +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  179  EGIN  182
            EG++
Sbjct  181  EGVS  184

263) cap5M in NC_007622


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (402),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 77/183 (43%), Positives = 125/183 (69%), Gaps = 17/183 (9%)

Query  52   LSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQ  111
            L  +++FL  P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + +++
Sbjct  11   LYAIIIFL--PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATD  68

Query  112  WADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFE  170
            + D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E
Sbjct  69   RLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYNQYELI--E  119

Query  171  QRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVIT  225
            +R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I+
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  226  GEG  228
            +EG
Sbjct  180  SEG  182

264) epsL in NC_020244


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 68/166 (41%), Positives = 113/166 (69%), Gaps = 3/166 (1%)

Query  3    ILFTIAV-VRLKIGSPVFFKQVRPGLHGKPFTLYKFRTMTDE-RDGEGNLLPDEVRLTKT  60
            +LF +++ +++   +P+ FKQ RPG+  K F +YKFR+M ++  +   + L     +TKT
Sbjct  20   LLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKT  79

Query  61   GRLIRKLSIDELPQLLNVLKGDLSLVGPRP-LLMDYLPLYTEKQARRHEVKPGITGWAQI  119
            G++IRK S+DELPQL+N+LKGD+++VGPRP L  +Y  +    +   H VKPG+TG AQ+
Sbjct  80   GKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQV  139

Query  120  NGRNAISWEKKFELDVWYVDNRSFFLDLKILCLTVRKVLVSEGIQQ  165
             GR+  + ++K + D  YV+N+SF LD+ I+  T+++ + SEG+ +
Sbjct  140  MGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

265) Osc7112_1248 in NC_019729


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (401),  Expect = 4e-26, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 122/189 (65%), Gaps = 8/189 (4%)

Query  31   VKRVLDRLCAAIALLVFSPVILIVAIAIYIRMGSPIVFSQLRPGKNGEVFQFYKFRTMTS  90
            +KR++D + +  A+++F P++++V+IAI I   +PIVF Q RPG +  +F++YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  91   D-RDADGNLLPDNERLTALGQFMRKTSLDELPQLWNVLKGEMSFVGPRP-LLVQY--LER  146
            D  +   + L   + +T  G+F+RKTSLDELPQL N+LKG+M+ VGPRP L  QY  +E+
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  147  YSPEQARRHDVMPGITGWAQVNGRRLLDGNWPEKFRLDVWYVDNWSLLLDLKILFLTVWK  206
                +   H V PG+TG AQV GR   +    +K + D  YV+N S+ LD+ I++ T+ +
Sbjct  121  --RTNVNVHLVKPGLTGLAQVMGRD--NNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  207  VLRQKEISQ  215
             +    +S+
Sbjct  177  TISSEGVSH  185

266) PAU_04341 in NC_012962


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 81/183 (45%), Positives = 125/183 (69%), Gaps = 6/183 (3%)

Query  7    RIFDIIFSLTGLIITSPILFILTIIGLFDTGSPL-FRQTRVGRFQKPFTLVKLRTMKIDT  65
            RIFDI+ SL ++II  P+LF+++I   +++ +P+ F+Q R G  +K F + K+R+M+ DT
Sbjct  3    RIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDT  62

Query  66   ASVAS-HLANSSSITKFGSFLRKSKLDELPQLWNVLKGEMSLVGPRPCLFNQEELITERK  124
            ++VA+ +L  +  ITK G F+RK+ LDELPQL N+LKG+M++VGPRP L+NQ ELI  R 
Sbjct  63   PNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRT  122

Query  125  LLNVFNVKPGITGLAQVNTVDMSTPKLLAEMDAHMIN--SLTLTDY--FKYIIQTVAGKG  180
             +NV  VKPG+TGLAQV   D +T     + D   ++  S+ L  Y  +K I +T+++ G
Sbjct  123  NVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

Query  181  SGD  183
             ++
Sbjct  183  VSH  185

267) bpr_I2542 in NC_014387


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 72/170 (43%), Positives = 114/170 (68%), Gaps = 9/170 (5%)

Query  22   FSWLYLILAVLVRVKLGNPIIFKQQRPGKDEKIFGMYKFRSMTDEKDENGN--LLPDEVR  79
            ++ L+L+ ++ +++    PI+FKQ+RPG  +K+F +YKFRSM ++  + +   L P +  
Sbjct  18   LPLLFLV-SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-  75

Query  80   LTSFGKKLRATSLDELPEFFNILKGDMSFIGPRPLLVKYLPY--YNERERLR-HSVRPGL  136
            +T  GK +R TSLDELP++FNILKGDM+ +GPRP L  Y  Y   + R  +  H V+PGL
Sbjct  76   ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--YNQYELIEKRTNVNVHLVKPGL  133

Query  137  TGYAQAHGRNAISWEKKFEYDVYYVEHLTFWMDIKVIIDTVKTVLSHDGV  186
            TG AQ  GR+  + ++K +YD +YVE+ +F +D+ +I  T+K  +S +GV
Sbjct  134  TGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

268) Acid345_3821 in NC_008009


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 120/185 (65%), Gaps = 4/185 (2%)

Query  11   IKRAFDWLAACIGIILVSPLLLAGMIAVRISMGRPVFFRQLRPGRRGRPFTVSKFRTM-N  69
            +KR FD +++  +II+  PLL+   IA++I    P+ F+Q RPG + + F + KFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  70   AKRGADGELLPDDERLTKTGKFLRSTSLDELPQLINVLRGDMSLVGPRP-LRMEYLDRYS  128
                   + L   + +TKTGKF+R TSLDELPQL+N+L+GDM++VGPRP L  +Y +   
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY-ELIE  119

Query  129  PRQSMR-HDVMPGITGWAQINGRNTLTWEEKFELDLWYVDNWSLWLDVRILALTFLSVLK  187
             R ++  H V PG+TG AQ+ GR+  T ++K + D  YV+N S+ LD+ I+  T+ + + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  188  REGIS  192
             EG+S
Sbjct  180  SEGVS  184

269) ABK1_0099 in NC_017162


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 123/184 (67%), Gaps = 2/184 (1%)

Query  5    MKRLVDIVISLIALTVLSPIFLIVAYKVRKNLGSPIFFYQERPGKDGKLFKMIKFRSMK-  63
            MKR+ DI  SL A+ ++ P++++V+  ++ +  +PI F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  64   DAFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML-KDFVALYS  122
            D+ +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L +++  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  123  PEQARRLEVRPGMTGLAQVSGRNELDYEERFKCDVWYVDNHNVWVDFKIMFKTVKVMLKR  182
              +     V+PG+TGLAQV GR++   +++ + D  YV+N++  +D  I++KT+K  +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  183  EGIN  186
            EG++
Sbjct  181  EGVS  184

270) CA_C3059 in NC_003030


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (401),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 125/197 (64%), Gaps = 20/197 (10%)

Query  29   KRVIDIVFSIIGIVVLSPLMLAICIYIKISSKGNAIFSHIRLGYRGKHIKVYKFRTMVQN  88
            KR++DI  S+ +I+++ PL++ + I IKI SKG  +F + R G + K +K+YKFR+M Q+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  89   AETVLKNMTPEQKKEFEENFKLEYDPRVTKVGRFLRKTSLDELPQFFNILRGNMTLVGPR  148
            +  V  +             +L+    +TK G+F+RKTSLDELPQ+FNIL+G+M++VGPR
Sbjct  62   TPNVATD-------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  149  PIVEAELNKYGRYGKK----LLSVKPGLTGLWQVSGRSDISYSERVMLDMQYIDNRSLWL  204
            P +    N+Y    K+    +  VKPGLTGL QV GR + +  ++V  D  Y++N+S+ L
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  205  DIKILFMTFIVVIKKEG  221
            D+ I++ T+   I  EG
Sbjct  166  DMYIIYKTIKNTISSEG  182

271) rfbP in NC_015687


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (401),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 125/197 (64%), Gaps = 20/197 (10%)

Query  29   KRVIDIVFSIIGIVVLSPLMLAICIYIKISSKGNAIFSHIRLGYRGKHIKVYKFRTMVQN  88
            KR++DI  S+ +I+++ PL++ + I IKI SKG  +F + R G + K +K+YKFR+M Q+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  89   AETVLKNMTPEQKKEFEENFKLEYDPRVTKVGRFLRKTSLDELPQFFNILRGNMTLVGPR  148
            +  V  +             +L+    +TK G+F+RKTSLDELPQ+FNIL+G+M++VGPR
Sbjct  62   TPNVATD-------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  149  PIVEAELNKYGRYGKK----LLSVKPGLTGLWQVSGRSDISYSERVMLDMQYIDNRSLWL  204
            P +    N+Y    K+    +  VKPGLTGL QV GR + +  ++V  D  Y++N+S+ L
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  205  DIKILFMTFIVVIKKEG  221
            D+ I++ T+   I  EG
Sbjct  166  DMYIIYKTIKNTISSEG  182

272) CEA_G3065 in NC_017295


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (401),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 80/197 (41%), Positives = 125/197 (64%), Gaps = 20/197 (10%)

Query  29   KRVIDIVFSIIGIVVLSPLMLAICIYIKISSKGNAIFSHIRLGYRGKHIKVYKFRTMVQN  88
            KR++DI  S+ +I+++ PL++ + I IKI SKG  +F + R G + K +K+YKFR+M Q+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  89   AETVLKNMTPEQKKEFEENFKLEYDPRVTKVGRFLRKTSLDELPQFFNILRGNMTLVGPR  148
            +  V  +             +L+    +TK G+F+RKTSLDELPQ+FNIL+G+M++VGPR
Sbjct  62   TPNVATD-------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  149  PIVEAELNKYGRYGKK----LLSVKPGLTGLWQVSGRSDISYSERVMLDMQYIDNRSLWL  204
            P +    N+Y    K+    +  VKPGLTGL QV GR + +  ++V  D  Y++N+S+ L
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  205  DIKILFMTFIVVIKKEG  221
            D+ I++ T+   I  EG
Sbjct  166  DMYIIYKTIKNTISSEG  182

273) Sgly_2999 in NC_015172


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 5e-26, Method: Compositional matrix adjust.
 Identities = 79/194 (41%), Positives = 118/194 (61%), Gaps = 25/194 (12%)

Query  9    KRLLDLAVSLPLLIIVSPLWLLIVVWIRAGSPGTALFRQTRVGIKGRPFTIYKFRTMVNN  68
            KR++D+  SL  +II  PL +L+ + I+  S G  +F+Q R G+K + F IYKFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  69   ADEVMKQKIALLKREGKFDPEDFVFQEKDDPRITGCGKFLRKTSLDELPQLLNILNGTMS  128
            + +V  +++         DP D+         IT  GKF+RKTSLDELPQL+NIL+G M+
Sbjct  62   TPNVATDRL---------DPADY---------ITKTGKFIRKTSLDELPQLFNILKGDMA  103

Query  129  LVGPRPEVPEIAEEYT-PEQRERLAMP---PGVTGLAQVSGRSGLTLSETLVYDLEYVRT  184
            +VGPR   P + ++Y   E+R  + +    PG+TGLAQV GR   T  + + YD  YV  
Sbjct  104  VVGPR---PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVEN  160

Query  185  WSLGLDLRILWKTV  198
             S+ LD+ I+ KT+
Sbjct  161  QSFKLDMYIIYKTI  174

274) wbtB in NC_008245


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  34   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  93
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  94   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  153
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  154  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  190
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

275) F92_03235 in NC_019537


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

276) wbtB in NC_019551


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

277) FTA_0627 in NC_009749


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

278) FTL_0593 in NC_007880


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

279) FTH_0593 in NC_008369


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

280) wbtB in NC_010677


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

281) NE061598_08170 in NC_017453


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

282) wbtB in NC_006570


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  34   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  93
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  94   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  153
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  154  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  190
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

283) wbtB in NC_016937


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

284) wbtB in NC_016933


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

285) wbtB in NC_009257


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (399),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/157 (50%), Positives = 111/157 (71%), Gaps = 2/157 (1%)

Query  39   KKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHMLQDPSKCITKVGGFLRKS  98
            K +SKGPI FKQ R G  +++F IYKFR+M  DTP +++T+ L DP+  ITK G F+RK+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP-NVATDRL-DPADYITKTGKFIRKT  86

Query  99   SLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELP  158
            SLDELPQ++NILKG+M++VGPRPAL NQ +LI +R +   + V  GLTG AQ+ GRD+  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  159  IPDKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGV  195
              +K + D  YV N+S  +D+  I+ T+ + ++  GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

286) SARLGA251_01040 in NC_017349


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (400),  Expect = 6e-26, Method: Compositional matrix adjust.
 Identities = 78/191 (41%), Positives = 130/191 (69%), Gaps = 15/191 (7%)

Query  8    IKRAIDLVLSIVLLCLTFPFMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCK  67
            +KR +D+  S+  + + +P++F+ +IAI I+S G  ++ Q R G   KL+KIYK+RSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  68   NAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFS  127
            ++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       L++
Sbjct  61   DTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYN  113

Query  128  S-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISI  181
              E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++YI  
Sbjct  114  QYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  182  RTLMVVITGEG  192
            +T+   I++EG
Sbjct  172  KTIKNTISSEG  182

287) KKY_3117 in NC_016078


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  110 bits (399),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 121/189 (65%), Gaps = 14/189 (7%)

Query  68   LKRVMDVLVSAITLIMLSPAFLLIAVAIRTSSKGSILFRQTREGLNGKPIEIYKFRTMYI  127
            +KR+ D++ S  ++I++ P ++L+++AI+  SKG+I+F+Q R G++ K + IYKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM--  58

Query  128  DRCDISGVAQTTSDDPR-ITPIGRFLRRTSLDELPQLFNILKGDMSLIGPRPHAFGMFAG  186
             R D + VA    D +  IT  G+F+R+TSLDELPQLFNILKGDM+++GPRP  +  +  
Sbjct  59   -RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL  117

Query  187  GTTYERLVPYYKARQTMKPGLSGWAQANGLRGPTDNAIRARARIDHDLAYIENFSLLLDI  246
                  +       + +KPGL+G AQ  G    TD+      +++ D  Y+EN S+ LD+
Sbjct  118  IEKRTNV-----NVHLVKPGLTGLAQVMGRDNNTDD-----QKVQYDKFYVENQSFKLDM  167

Query  247  KIIWKTLRQ  255
             II KT+++
Sbjct  168  YIIYKTIKN  176

288) Q7C_727 in NC_017856


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 68/147 (47%), Positives = 105/147 (72%), Gaps = 2/147 (1%)

Query  7    RILDFFLALFGLIASLPVL-LVLMVIGFFDTGSPIFRQQRVGRFQQPFTLLKFRTMRVDT  65
            RI+D+F +L+++I  LP+L LV + I +   G+ +F+Q+R G  ++ F + KFR+MR DT
Sbjct  3    RIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDT  62

Query  66   EQVATH-LADRNAITRFGHFLRRSKLDELPQLWNVLKGEMSLVGPRPCLYSQIVLIEERV  124
             +VAT+ L   + IT+ G F+R++ LDELPQL N+LKG+M++VGPRP LY+Q  LIE R 
Sbjct  63   PNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRT  122

Query  125  KRGVFNVRPGITGLAQINSVDMSEPER  151
            +  V  V+PG+TGLAQ+ + D +  ++
Sbjct  123  NVNVHLVKPGLTGLAQVMGRDNNTDDQ  149

289) yvfC in NC_006270


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (395),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 78/184 (43%), Positives = 126/184 (69%), Gaps = 2/184 (1%)

Query  4    KRFFDlalsvillvalsPAMILTACLIRWKIGSPVLFRQTRPGLNGEPFTLYKFRTMTDE  63
            KR+FD+  S+  ++ + P ++L +  I+    +P++F+Q RPG++   F +YKFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  64   -RDAAGNLLSDEKRLTKTGRLIRKTSLDELPQLINVIKGDLSLVGPRPLLMEYIPLYTKR  122
              + A + L     +TKTG++IRKTSLDELPQL+N++KGD+++VGPRP L +   L  KR
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  123  QW-RRHEVKPGITGWAQINGRNKVTWEEKFELDVWYVDHRSFlldlkillltvvkvlkSE  181
                 H VKPG+TG AQ+ GR++ T ++K + D  YV+++SF LD+ I+  T+ + + SE
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  182  GVSQ  185
            GVS+
Sbjct  182  GVSH  185

290) epsL in NC_006322


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (395),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 78/184 (43%), Positives = 126/184 (69%), Gaps = 2/184 (1%)

Query  4    KRFFDlalsvillvalsPAMILTACLIRWKIGSPVLFRQTRPGLNGEPFTLYKFRTMTDE  63
            KR+FD+  S+  ++ + P ++L +  I+    +P++F+Q RPG++   F +YKFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  64   -RDAAGNLLSDEKRLTKTGRLIRKTSLDELPQLINVIKGDLSLVGPRPLLMEYIPLYTKR  122
              + A + L     +TKTG++IRKTSLDELPQL+N++KGD+++VGPRP L +   L  KR
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  123  QW-RRHEVKPGITGWAQINGRNKVTWEEKFELDVWYVDHRSFlldlkillltvvkvlkSE  181
                 H VKPG+TG AQ+ GR++ T ++K + D  YV+++SF LD+ I+  T+ + + SE
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  182  GVSQ  185
            GVS+
Sbjct  182  GVSH  185

291) ABSDF0078 in NC_010400


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 122/184 (67%), Gaps = 2/184 (1%)

Query  5    MKRLVDIVISLIALTVLSPIFLIVAYKVRKNLGSPIFFYQERPGKDGKLFKMIKFRSMK-  63
            MKR+ DI  SL A+ ++ P++++V+  ++ +  +PI F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  64   DAFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML-KDFVALYS  122
            D+ +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L +++  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  123  PEQARRLEARPGMTGLAQVSGRNELDYEERFKCDVWYVDNHNVWVDFKIMFKTVKVMLKR  182
              +      +PG+TGLAQV GR++   +++ + D  YV+N++  +D  I++KT+K  +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  183  EGIN  186
            EG++
Sbjct  181  EGVS  184

292) STP_0900 in NC_015558


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (396),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 127/189 (68%), Gaps = 14/189 (7%)

Query  12   KRFFDILLSGTALLILSPIFLIVMLLVKINLGSPVIFKQKRPGKDSMVFNMYKFRTMTSY  71
            KR+FDI+ S  A++I+ P++++V + +KI+  +P++FKQ RPG  + +F++YKFR+M   
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---  58

Query  72   KDQNGNLLPDNLRLTSF----GKLLRSTSLDELPELWNIFIGDMSIVGPRPLLEKYLSLY  127
            +++  N+  D L  + +    GK++R TSLDELP+L NI+ GDM++VGPRP L  Y + Y
Sbjct  59   RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQY  115

Query  128  SVEQNRR----HEVRPGLTGYAQANGRNSLSWQEKFKMDVHYVDHITFIGDIKIIWKTIV  183
             + ++R     H V+PGLTG AQ  GR++ + ++K + D  YV++ +F  D+ II KTI 
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIK  175

Query  184  TVLKRDGIS  192
              +  +G+S
Sbjct  176  NTISSEGVS  184

293) Taci_0038 in NC_013522


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (398),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 67/152 (45%), Positives = 101/152 (67%), Gaps = 2/152 (1%)

Query  39   SPVIFRQVRPGLEGKPFTLYKFRTMR-DLHGSDGAPLPDRDRLTPFGVFLRSTSLDELPE  97
            +P++F+Q RPG+  K F +YKFR+MR D        L   D +T  G F+R TSLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  98   LFNVLKGEMSLVGPRPLLMEYLDLY-TPEQMRRHQVRPGITGIAQVMGRNALPWEERFRL  156
            LFN+LKG+M++VGPRP L +  +L     ++  H V+PG+TG+AQVMGR+    +++ + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  157  DVWYVDNLSLTLDLKILAMTVCKVIRREGISQ  188
            D  YV+N S+ LD+ I+  T+ + I  EG+S+
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

294) Sde_3797 in NC_007912


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (398),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 81/195 (42%), Positives = 122/195 (63%), Gaps = 20/195 (10%)

Query  35   LQQLGALLGVIALSPLLLTVYVLIKWESAGPVVFKQVRVGKHGRTFTLYKFRSMYMANDA  94
            ++ +++L ++I + PLL+ V + IK ES GP+VFKQ R G   + F +YKFRS  M +D+
Sbjct  5    FDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRS--MRQDT  62

Query  95   RYVDPASLASDRDGVCKKYFQDPRITRVGKFIRKYSIDELPQLWNVVRGDMVLVGPRPAL  154
              V    L +        Y     IT+ GKFIRK S+DELPQL N+++GDM +VGPRPAL
Sbjct  63   PNVATDRLDPA------DY-----ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL  111

Query  155  PSEVAEYDFKAKR---RLQ-VRPGLTGLWQVSGRANTTFEQQIALDSKYVAEKSLRMDLK  210
                 +Y++  KR    ++ V+PGLTGL QV GR N T +Q++  D  YV ++S+++D+ 
Sbjct  112  ---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  211  ILLLTLPAVVSAKGA  225
            I+  T+   +S+ G 
Sbjct  169  IIYKTIKNTISSEGV  183

295) Cfla_0763 in NC_014151


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (397),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 71/157 (46%), Positives = 109/157 (70%), Gaps = 9/157 (5%)

Query  42   SRGPVLFAQERPGLHGKPFQILKFRSMRTFEDSYDADGAELSNSARITPVGRVLRRTSLD  101
            S+GP++F Q+RPG+  K F+I KFRSMR  +D+ +     L  +  IT  G+ +R+TSLD
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMR--QDTPNVATDRLDPADYITKTGKFIRKTSLD  89

Query  102  ELPQLVNVLRGEMSIVGPRPALMYQVERYDDVQ-RQRLD---VRPGITGLAQVRGRNELT  157
            ELPQL N+L+G+M++VGPRPAL Y  ++Y+ ++ R  ++   V+PG+TGLAQV GR++ T
Sbjct  90   ELPQLFNILKGDMAVVGPRPAL-Y--NQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  158  WEEKIAVDLEYVRTVSASLDLRIVLRTFRVVISGGGV  194
             ++K+  D  YV   S  LD+ I+ +T++  IS+ GV
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

296) AOLE_19075 in NC_014259


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (397),  Expect = 8e-26, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 122/184 (67%), Gaps = 2/184 (1%)

Query  5    MKRLVDIVISLIALTVLSPIFLVVAYKVRKNLGSPIFFYQERPGKDGKLFKMIKFRSMK-  63
            MKR+ DI  SL A+ ++ P++++V+  ++ +  +PI F Q+RPG   KLFK+ KFRSM+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  64   DAFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML-KDFVALYS  122
            D+ +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L +++  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  123  PEQARRLEVRPGMTGLAQVSGRNELDYEERFKCDVWYVDNHNVWVDFKIMFKTVKVMTKR  182
              +     V+PG+TGLAQV GR++   +++ + D  YV+N++  +D  I++KT+K     
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  183  EGIN  186
            EG++
Sbjct  181  EGVS  184

297) BMB171_C4873 in NC_014171


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  109 bits (397),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 81/195 (42%), Positives = 125/195 (65%), Gaps = 20/195 (10%)

Query  34   KRCMDFMGALCGLILLSPLFLIIALIIKYEDPKGTVFFKQIRVGKDGKEFHMYKFRSMVA  93
            KR  D+ ++L ++I++ PL++++++ IK  ++KG + FKQ R G   K F +YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIK-IESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  94   DAEERLKDLLQYNEVSGAMFKMKEDPRITKIGKFIRRTSLDELPQLINVLKGEMSLVGPR  153
            D+ +   D            ++     ITK GKFIR+TSLDELPQL+N+LKG+M++VGPR
Sbjct  61   DTPNVATD------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  154  PPLPREVKEYTAYDKQR----LLVIPGCTGLWQVSGRNNLGFKEMVQLDLQYIEKGSILF  209
            P+L    ++Y   +K+      LV PG TGL QV GR+N    + VQ D  Y+E+ S+ +
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  210  DIFIIFKTVKEVFCS  224
            D++II+KT+K+ + S
Sbjct  166  DMYIIYKTIKNTISS  180

298) Cylst_4184 in NC_019757


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (394),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 78/188 (42%), Positives = 122/188 (65%), Gaps = 8/188 (4%)

Query  8    IKSVLDKVVAAIALVALSPLLLGVAIAIYFCMGSPVIFTQSRPGKNAHIFKFYKFRTM-T  66
            +K ++D   +  A++ + PLL+ V+IAI +   +P++F Q RPG +  +FK+YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  67   DKRDSKGNLLPDEKRLTSLGEFLRKTSLDELPQLWNVLKDDMSFVGPRPLLVTYLNRYTP  126
            D  +   + L     +T  G F+RKTSLDELPQL N+LK+DM+ VGPRP L  Y N+Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYEL  117

Query  127  EQARR----HEVKPGITGLTQINGRNSLGWEEKFKLDVWYVDNWSLWLDLKIIFLTFFKV  182
             + R     H VKPG+TGL+Q+ GR++   ++K + D  YV+N S+ LD+ II+ T+ + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  183  LKQEGINQ  190
            +  EG+++
Sbjct  178  ISSEGVSH  185

299) CD630_27830 in NC_009089


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 76/163 (47%), Positives = 114/163 (70%), Gaps = 5/163 (3%)

Query  66   GILIKIEDKGPITYKQERLGKCGRRFYIYKLRSMRTDAEKFGAQWAEKDDPRITKVGKFI  125
            +I IKIE KGPI +KQ+R G   + F IYK+RSMR D+ + ++++ +  D  ITK GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPAD-YITKTGKFI  83

Query  126  RKTRIDEIPQLFNILKGDMGLIGPRPERPNFTVQFN-EEIPGFINRLAIKPGLTGWAQVN  184
            RKT +DE+PQLFNILKGDM+++GPRP    +  Q++  E    +N   +KPGLTG AQV 
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA---LYNQYELIEKRTNVNVHLVKPGLTGLAQVM  140

Query  185  GGYEITPEEKLKEDIYYIKNRSILLDFKILFKTVKVVLTGDGA  227
            G  + T ++K++ D +Y+ N+S+ LD  I++KT+K  ++++G 
Sbjct  141  GRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

300) CDBI1_13565 in NC_017179


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 76/163 (47%), Positives = 114/163 (70%), Gaps = 5/163 (3%)

Query  66   GILIKIEDKGPITYKQERLGKCGRRFYIYKLRSMRTDAEKFGAQWAEKDDPRITKVGKFI  125
            +I IKIE KGPI +KQ+R G   + F IYK+RSMR D+ + ++++ +  D  ITK GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPAD-YITKTGKFI  83

Query  126  RKTRIDEIPQLFNILKGDMGLIGPRPERPNFTVQFN-EEIPGFINRLAIKPGLTGWAQVN  184
            RKT +DE+PQLFNILKGDM+++GPRP    +  Q++  E    +N   +KPGLTG AQV 
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA---LYNQYELIEKRTNVNVHLVKPGLTGLAQVM  140

Query  185  GGYEITPEEKLKEDIYYIKNRSILLDFKILFKTVKVVLTGDGA  227
            G  + T ++K++ D +Y+ N+S+ LD  I++KT+K  ++++G 
Sbjct  141  GRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

301) CD196_2624 in NC_013315


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 76/163 (47%), Positives = 114/163 (70%), Gaps = 5/163 (3%)

Query  70   GILIKIEDKGPITYKQERLGKCGRRFYIYKLRSMRTDAEKFGAQWAEKDDPRITKVGKFI  129
            +I IKIE KGPI +KQ+R G   + F IYK+RSMR D+ + ++++ +  D  ITK GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPAD-YITKTGKFI  83

Query  130  RKTRIDEIPQLFNILKGDMGLIGPRPERPNFTVQFN-EEIPGFINRLAIKPGLTGWAQVN  188
            RKT +DE+PQLFNILKGDM+++GPRP    +  Q++  E    +N   +KPGLTG AQV 
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA---LYNQYELIEKRTNVNVHLVKPGLTGLAQVM  140

Query  189  GGYEITPEEKLKEDIYYIKNRSILLDFKILFKTVKVVLTGDGA  231
            G  + T ++K++ D +Y+ N+S+ LD  I++KT+K  ++++G 
Sbjct  141  GRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

302) CDR20291_2671 in NC_013316


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 76/163 (47%), Positives = 114/163 (70%), Gaps = 5/163 (3%)

Query  70   GILIKIEDKGPITYKQERLGKCGRRFYIYKLRSMRTDAEKFGAQWAEKDDPRITKVGKFI  129
            +I IKIE KGPI +KQ+R G   + F IYK+RSMR D+ + ++++ +  D  ITK GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPAD-YITKTGKFI  83

Query  130  RKTRIDEIPQLFNILKGDMGLIGPRPERPNFTVQFN-EEIPGFINRLAIKPGLTGWAQVN  188
            RKT +DE+PQLFNILKGDM+++GPRP    +  Q++  E    +N   +KPGLTG AQV 
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA---LYNQYELIEKRTNVNVHLVKPGLTGLAQVM  140

Query  189  GGYEITPEEKLKEDIYYIKNRSILLDFKILFKTVKVVLTGDGA  231
            G  + T ++K++ D +Y+ N+S+ LD  I++KT+K  ++++G 
Sbjct  141  GRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

303) CLOST_0359 in NC_014614


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 74/158 (47%), Positives = 110/158 (70%), Gaps = 3/158 (1%)

Query  49   ISIDSEGSPLYKQERVGQFGKAFYIYKFRTMLKDADKLGPKRTSQDDNRITKTGKFLRRT  108
            I I+S G+ ++KQ+R G   K F IYKFR+M +D+ +++  R    D  ITKTGKF+R+T
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-ITKTGKFIRKT  86

Query  109  SLDELPQLFNVLKGDMSLVGYRPGVYEDYP--QEYIQTEIFKFKPGISGYAQINGRSNLT  166
            SLDELPQLFN+LKGDM++VG RP++Y++Y   +   + ++   KPG++G AQ+ GR N T
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  167  QDLKLYWEKEYTKDISFKTDLMIIIKTILNVLNKKDVN  204
            +D K+  +K Y  + SFK D+ II KTI N ++  +V+
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

304) HMPREF0946_01291 in NC_022196


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (394),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 77/166 (47%), Positives = 114/166 (69%), Gaps = 8/166 (4%)

Query  28   VVAILVKKKLGSPVLFKQKRPGLNEKIFIMYKFRTM-IDKKDEKGDLLPDKDRLTKFGKF  86
            +V+I +K    +P++FKQ RPG+++K+F +YKFR+M  D  +   D L   D +TK GKF
Sbjct  23   LVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKF  82

Query  87   LRSTSLDEIPELWNVLKGEMSLVGPRPLLVQYLSKYTKEEKRR----HEVKPGITGWAQI  142
            +R TSLDE+P+L N+LKG+M++VGPRP L  Y ++Y   EKR     H VKPG+TG AQ+
Sbjct  83   IRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYELIEKRTNVNVHLVKPGLTGLAQV  139

Query  143  NGRNNTTWSDRFKNDVYYVENFSFLLDMKIIIQTFLKVIKRRDINQ  188
             GR+N T  ++ + D +YVEN SF LDM II +T+ + I   ++++
Sbjct  140  MGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

305) SYN_02686 in NC_007759


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (391),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 70/155 (46%), Positives = 105/155 (68%), Gaps = 8/155 (5%)

Query  15   APVFFTQQRPGLKGKPFFLYKFRTM-TDARNSAGSLLPDAERLTRFGRFLRSTSLDELPE  73
            +P+ F Q+RPG+K K F +YKFR+M  D+ N A   L  A+ +T+ G+F+R TSLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  74   LWNVLKGEMSLVGPRPLLMEYLGRYTLEQARR----HEVRPGITGWAQVNGRNTLSWEDK  129
            L N+LKG+M++VGPRP L  Y  +Y L + R     H V+PG+TG AQV GR+  + ++K
Sbjct  94   LFNILKGDMAVVGPRPAL--Y-NQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  130  FKLDVWYVDHVSISLDIRIIVMTIWKIFKREGINQ  164
             + D  YV++ S+ LD+ II  TI + +  EG+++
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

306) Sden_2648 in NC_007954


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 70/159 (45%), Positives = 108/159 (68%), Gaps = 4/159 (2%)

Query  29   VSIKIGS--PVIFVQKRPGIHGKLLHLYKFRSMSNAVDEHGS-LLPDAERLTSFGMKLRS  85
            ++IKI S  P++F Q RPG+  KL+ +YKFRSM +   + ++  L  A+ +T  G  +R 
Sbjct  26   IAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRK  85

Query  86   TSLDEIPSLFNVLKGDMSLVGPRP-LLVEYLPLYSQEQARRHNVRPGITGWAQINGRNAI  144
            TSLDE+P LFN+LKGDM++VGPRP L  +Y  +  + +   H V+PG+TG AQ+ GR+  
Sbjct  86   TSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNN  145

Query  145  SWEDKFKFDVWYVDNQSFWLDIKILLLTVKKVFVREGIS  183
            + ++K ++D  YV+NQSF LD+ I+  T+K+ +  EG+S
Sbjct  146  TDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

307) TOPB45_0361 in NC_015682


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (393),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 75/170 (45%), Positives = 119/170 (70%), Gaps = 5/170 (2%)

Query  8    KRLFDIFLASIGLILSLPLWLIIAIAIKLEDGGPIFYSQERVGKDGKIFRILKFRSMIPD  67
            KR+FDIF +  ++I+ LPL ++++IAIK+E  GPI + Q+R G   K+F+I KFRSM  D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  68   AEKQASVAWTFENDPRITKVGRFLRRTALDELPSLLSILKGDMSFVGPRALAVEEQKFLE  127
            + + A+    ++    ITK G+F+R+T+LDELP L++ILKGDM+ VGPR+   ++  ++E
Sbjct  62   TPNVATD--RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  128  KKIPGFEKRLAVCPGLTGLSQVYNPEDDP-YKKLKYDLEYIEKMSFWLDI  176
            K+    + +L V PGLTGL+QV   +++   +K++YD  Y+E+ SF LD+
Sbjct  120  KR-TNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDM  167

308) WCGN in NC_005090


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (392),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 68/157 (44%), Positives = 104/157 (67%), Gaps = 2/157 (1%)

Query  34   IKKHLGSPVLFRQERPGKGGEIFKIFKFRTM-SDARDAEGNLLSDEERLAGIGKRIRSLS  92
            IK +  +P++F+Q+RPG    +FKI+KFR+M  D+ +   + L   + ++  GK IR  S
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTS  87

Query  93   LDELPQLLNVLRGEMSFVGPRP-LLVEYLPLYSQEEARRHDVLPGITGWAQVNGRNAISW  151
            LDELPQL+N+L+G+M+ VGPRP L  +Y  +  + +   H V PG+TG AQV GR+  + 
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  152  EEKFALDLYYVEHQSFWLDMKILYLTAQKVFKREGIS  188
            ++K   D +YVE+QSF LDM I+Y T ++ +  EG+S
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

309) GFO_1988 in NC_008571


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 68/153 (45%), Positives = 103/153 (68%), Gaps = 2/153 (1%)

Query  37   NRGKPFFFQNRPGKLGENFRIVKFKTM-TDARDKEGNLLPDASRLTAIGKFVRKTSIDEI  95
            ++G   F Q+RPG     F+I KF++M  D+ +   + L  A  +T  GKF+RKTS+DE+
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  96   PQLFNVLNGDMSIIGPRP-LLPEYLEIYTESQSKRHNVRPGITGWAQVNGRNAISWTQKF  154
            PQLFN+L+GDM+++GPRP L  +Y  I   ++ + H V+PG+TG AQV GR+  +  QK 
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  155  SYDIWYVENICFSLDLKILFRTIRKVLISEGIN  187
             YD  YVEN  F LD+ I+++TI++ + SEG++
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

310) epsL in NC_021362


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 80/184 (44%), Positives = 126/184 (69%), Gaps = 2/184 (1%)

Query  4    KRFFDlslsvillialsPAMILTACLIRWKIGSPVLFRQTRPGLNGEPFTLYKFRTMTDE  63
            KR+FD+  S+  +I + P ++L +  I+    +P++F+Q RPG++   F +YKFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  64   -RDEAGNLLSDEKRLTKTGRLIRKTSLDELPQLINVIKGDLSLVGPRPLLMEYIPLYTKR  122
              + A + L     +TKTG++IRKTSLDELPQL+N++KGD+++VGPRP L +   L  KR
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  123  QW-RRHEVKPGITGWAQINGRNKVTWEEKFELDVWYVDHRSFlldlkillltivkvlkSE  181
                 H VKPG+TG AQ+ GR++ T ++K + D  YV+++SF LD+ I+  TI + + SE
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  182  GVSQ  185
            GVS+
Sbjct  182  GVSH  185

311) yvfC in NC_016784


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  108 bits (391),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 69/169 (41%), Positives = 114/169 (68%), Gaps = 14/169 (8%)

Query  37   VKRVFDIAAATLLLCGVSVIL--LFAMA-AVRCAIGSPVLFKQTRPGHNGRPFTLYKLRT  93
            +KR+FDI ++   L ++ ++L  LF ++ A++    +P++FKQ RPG + + F +YK+R+
Sbjct  1    MKRIFDIFSS---LYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRS  57

Query  94   MTDARDENGGLLPDHLR----LTKTGRLIRKLSIDELPQLFNVLKGDISLVGPRP-LLMD  148
            M   R++   +  D+L     +TKTG++IRK S+DELPQLFN+LKGD+++VGPRP L  +
Sbjct  58   M---RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQ  114

Query  149  YLPLYTAEQARRHEVKPGITGWAQINGRNAISWEEKFKLDVWYVDNRTF  197
            Y  +    +   H VKPG+TG AQ+ GR+  + ++K + D  YV+N++F
Sbjct  115  YELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSF  163

312) BCA_5417 in NC_012472


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (390),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 125/193 (65%), Gaps = 26/193 (13%)

Query  31   MKRLIDIVGSFCGIIILLPVFIIVAICIKLEDPKGPVFFKQIRVGKDEKDFGMYKFRSMV  90
            MKR++DI +S+ +III+LP++++V+I IK+E +KGP+ FKQ R G  +K F +YKFRSM 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  91   TDAEEKLQDLLQHNEVSGAMFKMKDDPRVTKIGKFIRKTSIDELPQLINVLKGEMSLVGP  150
             D+ +   D L+  +             +TK GKFIRKTS+DELPQL+N+LKG+M++VGP
Sbjct  60   QDTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGP  107

Query  151  RPPLLREVKTYTAYD--KQRLKVI-----PGCTGLWQVSGRSNIGFREMVELDLYYIQYR  203
            RP+L      Y  Y+   +R +V      PG TGL QV GR N    + V+ D +Y++ +
Sbjct  108  RPAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQ  161

Query  204  SILFDFKIILKTV  216
            S+ +D  II KT+
Sbjct  162  SFKLDMYIIYKTI  174

313) bcf_26440 in NC_016779


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (390),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 125/193 (65%), Gaps = 26/193 (13%)

Query  31   MKRLIDIVGSFCGIIILLPVFIIVAICIKLEDPKGPVFFKQIRVGKDEKDFGMYKFRSMV  90
            MKR++DI +S+ +III+LP++++V+I IK+E +KGP+ FKQ R G  +K F +YKFRSM 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  91   TDAEEKLQDLLQHNEVSGAMFKMKDDPRVTKIGKFIRKTSIDELPQLINVLKGEMSLVGP  150
             D+ +   D L+  +             +TK GKFIRKTS+DELPQL+N+LKG+M++VGP
Sbjct  60   QDTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGP  107

Query  151  RPPLLREVKTYTAYD--KQRLKVI-----PGCTGLWQVSGRSNIGFREMVELDLYYIQYR  203
            RP+L      Y  Y+   +R +V      PG TGL QV GR N    + V+ D +Y++ +
Sbjct  108  RPAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQ  161

Query  204  SILFDFKIILKTV  216
            S+ +D  II KT+
Sbjct  162  SFKLDMYIIYKTI  174

314) Desor_5324 in NC_016584


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (390),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 74/171 (44%), Positives = 111/171 (65%), Gaps = 18/171 (10%)

Query  41   PFWLLIVLWIRADSPGPAMFKQTRIGLRGKPYTIYKFRTMVQNAEALMKDKLDKVNDLEN  100
            P+ +L+ + I+ +S GP +FKQ R G++ K + IYKFR+M Q++  +  D+LD      +
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDP----AD  74

Query  101  FVFQEKDDPRITRSGHFLRKTSLDELPQLLNILIGNMSLVGPRPEVPELVKLYTSEQRQR  160
            +         IT++G F+RKTSLDELPQL+NIL G+M++VGPRP + +   L   E+R  
Sbjct  75   Y---------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL--IEKRTN  123

Query  161  LNVL---PGVTGLAQVNGRSELTLGETMSYDLDYVRSWNFWLDLKILWKTI  208
            +NV    PG+TGLAQV GR + T ++ + YD  YV + +F LD+ I+ KTI
Sbjct  124  VNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

315) PCA10_19840 in NC_021499


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (390),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 67/161 (42%), Positives = 111/161 (69%), Gaps = 3/161 (1%)

Query  30   IAMWVKLDV-GKVFFRQIRPGLNGIPFEMVKFQTM-VDSHDSSGRSLPDSERLTKLGIFL  87
            +++ +K++  G + F+Q RPG++   F + KF++M  D+ + +   L  ++ +TK G F+
Sbjct  24   VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFI  83

Query  88   RSTSLDELPELWNVLRGHMSLVGPRPLLMEYLTLYDKK-QFRRHEVRPGITGWAQVNGRN  146
            R TSLDELP+L N+L+G+M++VGPRP L +   L +K+ +   H V+PG+TG AQV GR+
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRD  143

Query  147  ALSWDERFELDVWYVENQSFKLDMKILLLTVRKVIAREGIT  187
              + D++ + D  YVENQSFKLDM I+  T+++ I+ EG++
Sbjct  144  NNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

316) Elen_2023 in NC_013204


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (390),  Expect = 3e-25, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 126/189 (67%), Gaps = 10/189 (5%)

Query  7    KRACDLVVGLVALPFVLIIIAVLAPFIHFEDKGPVFYNAPRVGLGGRDFKMYKLRSMRVN  66
            KR  D+  +L A+ + L ++ +++  I +E KGP+ ++  R G+  + FK+YK+RSMR +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   APDLIME--DGSTYNGADDPRMTRVGAFMRKTSLDEMPQFLNVLKGDMSVVGPRPDLRRE  124
            +P++  +  D + Y       +T+ G F+RKTSLDE+PQ++N+LKGDM+VVGPRP L  +
Sbjct  62   TPNVATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQ  114

Query  125  TELYEGDEHLKLT-VKPGITGYAAVYGRNSLPWHDRLALDVFYVRNVSFPLDVKVFFKTF  183
             EL E   ++++  VKPG+TG A V GR++   ++++  D FYV N SF LD+ +++KT+
Sbjct  115  YELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

Query  184  SAVFNQEGV  192
               ++ EGV
Sbjct  175  KNTISSEGV  183

317) Daes_3286 in NC_014844


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (389),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 66/155 (43%), Positives = 103/155 (67%), Gaps = 8/155 (5%)

Query  34   SPVFFRQVRPGLHGKPFEIVKFRTMRDSTGPDGT-PLPDCDRLPPFGRFLRSTSLDELPE  92
            +P+ F+Q RPG+  K F I KFR+MR+ T   +T  L   D +   G+F+R TSLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  93   LINVLRGEMSLVGPRPLLMAYLDRYSPRQARR----HEVRPGITGWAQVNGRNAISWDEK  148
            L+N+L+G+M++VGPRP L    ++Y   + R     H V+PG+TG AQV GR+  + D+K
Sbjct  94   LFNILKGDMAVVGPRPAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  149  FEYDIWYVDNQSLALDLKILWLTLGSVFKADDVCQ  183
             +YD  YV+NQS+ LD+ I+  T+ + + +++V +
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

318) BATR1942_15050 in NC_014639


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (389),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 69/166 (42%), Positives = 113/166 (69%), Gaps = 5/166 (3%)

Query  24   VFAMCI-IRLKIGSPVFFTQVRPGLNGKPFTLYKFRTMTDERDKEGN--LLPDEVRLTKT  80
            +F + I I++   +P+ F Q RPG++ K F +YKFR+M ++  + +   L P +  +TKT
Sbjct  21   LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-ITKT  79

Query  81   GKLIRKLSIDELPQLWNVIKGDLSLVGPRP-LLMEYLPLYTNKQSRRHEVKPGITGWAQV  139
            GK+IRK S+DELPQL N++KGD+++VGPRP L  +Y  +    +   H VKPG+TG AQV
Sbjct  80   GKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQV  139

Query  140  NGRNAISWEKKFELDVWYVDHRSFFLDLKILFLTMRKVLISEGIHQ  185
             GR+  + ++K + D  YV+++SF LD+ I++ T+++ + SEG+ +
Sbjct  140  MGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

319) epsL in NC_016808


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (389),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 124/185 (68%), Gaps = 2/185 (1%)

Query  2    LKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMK-  60
            +KR++DI  S  A+I++ PL+++++  +K +   PI+F Q RPG   K F++ KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DSRNEKGELLPDSERLTPFGHFLRSSSLDELPELWNVLKGDMSLVGPRP-LLMEYLPLYN  119
            D+ N   + L  ++ +T  G F+R +SLDELP+L N+LKGDM++VGPRP L  +Y  + +
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  120  AEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQSLWLDIKILLKTLNVVIFR  179
              + + H V+PG+TG AQV GR+  + +QK + D  YVENQS+ LD+ I+ KT++  I  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  180  KNVND  184
              V++
Sbjct  181  EGVSH  185

320) wcaJ in NC_017027


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (389),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 124/185 (68%), Gaps = 2/185 (1%)

Query  2    LKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMK-  60
            +KR++DI  S  A+I++ PL+++++  +K +   PI+F Q RPG   K F++ KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DSRNEKGELLPDSERLTPFGHFLRSSSLDELPELWNVLKGDMSLVGPRP-LLMEYLPLYN  119
            D+ N   + L  ++ +T  G F+R +SLDELP+L N+LKGDM++VGPRP L  +Y  + +
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  120  AEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQSLWLDIKILLKTLNVVIFR  179
              + + H V+PG+TG AQV GR+  + +QK + D  YVENQS+ LD+ I+ KT++  I  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  180  KNVND  184
              V++
Sbjct  181  EGVSH  185

321) rfbP in NC_002663


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  107 bits (389),  Expect = 4e-25, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 124/185 (68%), Gaps = 2/185 (1%)

Query  2    LKRFLDIVISATALILLSPLFLIIAYQVKKNLGTPILFHQMRPGRYGKAFNMIKFRTMK-  60
            +KR++DI  S  A+I++ PL+++++  +K +   PI+F Q RPG   K F++ KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DSRNEKGELLPDSERLTPFGHFLRSSSLDELPELWNVLKGDMSLVGPRP-LLMEYLPLYN  119
            D+ N   + L  ++ +T  G F+R +SLDELP+L N+LKGDM++VGPRP L  +Y  + +
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  120  AEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQSLWLDIKILLKTLNVVIFR  179
              + + H V+PG+TG AQV GR+  + +QK + D  YVENQS+ LD+ I+ KT++  I  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  180  KNVND  184
              V++
Sbjct  181  EGVSH  185

322) tuaA in NC_002570


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (387),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 74/160 (47%), Positives = 114/160 (72%), Gaps = 11/160 (6%)

Query  17   LLVAILIKLEDPKGSIIYKQERLGKDNKPFMIYKFRSMVEGAEKKTGPVLATQNDDRITK  76
            +LV+I IK+E +KG+I++KQ+R G  NK F IYKFRSM +++ + +   L  +  D ITK
Sbjct  22   FLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITK  78

Query  77   VGKFIRATRLDELPQLFNVLKGDMSLVGPRPE--RSF-FIEQLSKEHLDYAYRNTVQPGI  133
             GKFIR T LDELPQLFN+LKGDM++VGPRP     + +IE+ ++ ++     + V+PG+
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNV-----HLVKPGL  133

Query  134  TGYAQIMGKYSTEAEDKLRFDLYYIRNYTFWLDIVIMLKT  173
            TG AQ+MG+ +   ++K+++D +Y+ N +F LD+ I+ KT
Sbjct  134  TGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

323) epsE in NC_008600


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (387),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 85/193 (45%), Positives = 125/193 (65%), Gaps = 26/193 (13%)

Query  31   MKRLIDIVGSFCGIIILLPVFIIVAICIKLEDPKGPVFFKQMRIGKDEKDFGMYKFRSMV  90
            MKR++DI +S+ +III+LP++++V+I IK+E +KGP+ FKQ R G  +K F +YKFRSM 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  91   TDAEEKLQDLLQHNEVSGAMFKMKDDPRVTKIGKFIRKTSIDELPQLINVLKGEMSLVGP  150
             D+ +   D L+  +             +TK GKFIRKTS+DELPQL+N+LKG+M++VGP
Sbjct  60   QDTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGP  107

Query  151  RPPLLREVKTYTAYD--KQRLKVI-----PGCTGLWQVSGRSNIGFREMVELDLYYIQYR  203
            RP+L      Y  Y+   +R +V      PG TGL QV GR N    + V+ D +Y++ +
Sbjct  108  RPAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQ  161

Query  204  SILFDFKIILKTV  216
            S+ +D  II KT+
Sbjct  162  SFKLDMYIIYKTI  174

324) NT08PM_0216 in NC_017764


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (387),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 76/185 (42%), Positives = 124/185 (68%), Gaps = 2/185 (1%)

Query  2    LKRFLDIVISATALILLSPLFLIIAYQVRKNLGTPILFHQMRPGRYGKAFNMIKFRTMK-  60
            +KR++DI  S  A+I++ PL+++++  ++ +   PI+F Q RPG   K F++ KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   DSRNEKGELLPDSERLTPFGHFLRSSSLDELPELWNVLKGDMSLVGPRP-LLMEYLPLYN  119
            D+ N   + L  ++ +T  G F+R +SLDELP+L N+LKGDM++VGPRP L  +Y  + +
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  120  AEQAKRHNVRPGITGYAQVNGRNAISWEQKFKLDVWYVENQSLWLDIKILLKTLNVVIFR  179
              + + H V+PG+TG AQV GR+  + +QK + D  YVENQS+ LD+ I+ KT++  I  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  180  KNVND  184
              V++
Sbjct  181  EGVSH  185

325) BF0817 in NC_006347


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (387),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 66/147 (45%), Positives = 99/147 (68%), Gaps = 2/147 (1%)

Query  44   FLQERPGRHGKIFKVIKFKTMTDE-RDAEGNLLPDDRRLTKIGKFVRSTSIDELPQLINV  102
            F Q+RPG   K+FK+ KF++M ++  +   + L     +TK GKF+R TS+DELPQL+N+
Sbjct  38   FKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNI  97

Query  103  LKGDMSLIGPRP-LLPQYLSLYNSEQARRHEVRPGITGWAQVNGRNAISWTRKFELDVWY  161
            LKGDM+++GPRP L  QY  + +  +   H V+PG+TG AQV GR+  +  +K + D  Y
Sbjct  98   LKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFY  157

Query  162  VDHCSFSLDLKIIFLTIKKVFVREGIS  188
            V++ SF LD+ II+ TIK+ +  EG+S
Sbjct  158  VENQSFKLDMYIIYKTIKNTISSEGVS  184

326) Tlie_1811 in NC_016148


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (387),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 100/150 (67%), Gaps = 2/150 (1%)

Query  39   PVIFSQIRPGLGGKPFSMYKFRTMTDE-RDEEGNLLPDEQRLTRLGIFLRSTSLDELPEL  97
            P++F Q RPG+  K F +YKFR+M ++  +   + L   + +T+ G F+R TSLDELP+L
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  98   FNVLKGDMSLVGPRP-LLMQYLTRYTPEQARRHEVKPGITGWAQVNGRNNLTWEERFRLD  156
            FN+LKGDM++VGPRP L  QY       +   H VKPG+TG AQV GR+N T +++ + D
Sbjct  95   FNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYD  154

Query  157  VWYVDNWSLWLDIKILFMTLLKVLKREGIN  186
              YV+N S+ LD+ I++ T+ + +  EG++
Sbjct  155  KFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

327) CPR_0454 in NC_008262


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (386),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 78/185 (43%), Positives = 129/185 (70%), Gaps = 14/185 (7%)

Query  28   KRVMDILGSGFGLITLSPLFLIVAIAIKFEDSKGSVLFSQKRVGQYGKEFNMYKFRSMVS  87
            KR+ DI++S +++I + PL+++V+IAIK+E SKG+++F Q R G   K F++YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  88   NAEELKAKLMEQNEMSGPMFKMKHDPRITKVGKFIRKTSIDELPQLINILKGEMSLVGPR  147
            ++ ++ +  ++  +             ITK GKFIRKTS+DELPQL+NILKG+M++VGPR
Sbjct  61   DTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  148  PSLPKEVAKFEPWMLERLE-VKPGLTCYWQVMGRNDIDFEDWMKLDIKYVHDRNLFLDIK  206
            P+L ++   +E +    ++ VKPGLT   QVMGR++   ++ ++ D  YV+++++ LD+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  207  LIFKT  211
            +I+KT
Sbjct  169  IIYKT  173

328) Tmz1t_1126 in NC_011662


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (386),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 64/151 (43%), Positives = 102/151 (68%), Gaps = 2/151 (1%)

Query  35   SPVLFRQTRPGLHGQPFQMVKFRTMR-DAIGPDGQPLPDSERMTPFGSFLRSASLDELPE  93
            +P++F+Q RPG+  + F++ KFR+MR D+     + L  ++ +T  G F+R +SLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  94   LWNVLKGDMSLVGPRP-LLMEYLPLYSPEQARRHEVRPGVTGWAQINGRNALSWEEKFRL  152
            L N+LKGDM++VGPRP L  +Y  +    +   H V+PG+TG AQ+ GR+  + ++K + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  153  DVWYVDNQSFWLDLKILALTVKKVFVREGIS  183
            D  YV+NQSF LD+ I+  T+K+ +  EG+S
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

329) epsL in NC_020410


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (387),  Expect = 6e-25, Method: Compositional matrix adjust.
 Identities = 69/168 (42%), Positives = 112/168 (67%), Gaps = 14/168 (8%)

Query  4    KRVFDIAAATLLLCGASVIL--LFAMA-AVRCAIGSPVLFKQTRPGHNGRPFTLYKLRTM  60
            KR+FDI ++   L +  ++L  LF ++ A++    +P++FKQ RPG + + F +YK+R+M
Sbjct  2    KRIFDIFSS---LYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  61   TDARDENGGLLPDHLR----LTKTGRLIRKLSIDELPQLFNVLKGDISLVGPRP-LLMDY  115
               R++   +  D+L     +TKTG++IRK S+DELPQLFN+LKGD+++VGPRP L  +Y
Sbjct  59   ---RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY  115

Query  116  LPLYTAEQARRHEVKPGITGWAQINGRNAISWEEKFKLDVWYVDNRTF  163
              +    +   H VKPG+TG AQ+ GR+  + ++K + D  YV+N++F
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSF  163

330) Sputcn32_2528 in NC_009438


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (386),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 77/182 (43%), Positives = 124/182 (69%), Gaps = 4/182 (2%)

Query  1    MMRLIDllaaffgllllWPILFIVTIIGLFDTGSPI-FIQTRVGKHRKPFKLIKFRTMSK  59
            M R++D+++++++++++ P+LF+V+I   +++ +PI F Q R G   K FK+ KFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DTASVAS-HLASNAAITKFGGFLRKTKIDELPQLINVLKGEMSLVGPRPNLFNQEELIAE  118
            DT++VA+ +L +   ITK G F+RKT +DELPQL+N+LKG+M++VGPRP L+NQ ELI  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  RDALGVYDVLPGVTGLAQVQNIDMSTPKLLAQTDKQMID--TLTLGRYFKYILMTATGRG  176
            R  + V  V PG+TGLAQV   D +T     Q DK  ++  ++ L+ Y+ Y  +  T  +
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  177  SG  178
             G
Sbjct  181  EG  182

331) BcerKBAB4_3389 in NC_010184


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (385),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 127/185 (69%), Gaps = 2/185 (1%)

Query  1    MKRIFDvcisllllfvcllpilvvAILVRLKLGSPVLFKQQRPGLHGQPFNLYKFRTM-L  59
            MKRIFD+  SL  +++ L  +++V+I +++   +P++FKQ+RPG+  + F++YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DKRDSNGELLSDQDRLTTFGEILRKYSLDELPQLINVVRGDLSLVGPRP-LLMEYLPLYS  118
            D  +   + L   D +T  G ++RK SLDELPQL+N+++GD+++VGPRP L  +Y  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  SKQARRHDVKPGITGWAQINGRNSITWEEKFELDVWYVEKRSFLLDLKIIVLTITKVFKT  178
              +   H VKPG+TG AQ+ GR++ T ++K + D  YVE++SF LD+ II  TI + + +
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  179  EGINH  183
            EG++H
Sbjct  181  EGVSH  185

332) BF0749 in NC_003228


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (385),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 126/185 (69%), Gaps = 3/185 (1%)

Query  6    LKRVIDFSLVFCTLVICCPILFIIVFWLYFANKGAGVFFLQNRPGRDGKIFKVIKFKTMT  65
            +KR++D+   + +++I  P+LF++ + + + +KG+ VF  Q+RPG   K+FK+ KF++M 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVF-KQDRPGVKNKLFKIYKFRSMR  59

Query  66   DERDSKGC-LLPDAQRLTKVGKFVRSTSIDELPQLINVLKGDMALIGPRpllpqylllyS  124
            ++  + +   L  A+ +TK GKF+R TS+DELPQL+N+LKGDMA++GPRP L +   L  
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  125  K-EQARRHEVRPGITGWAQVNGRNAISWTKKFELDVWYVDHCSFLLDLKIFFLTIKKVFV  183
            K  +   H V+PG+TG AQV GR+  +  +K + D  YV++ SF LD+ I++ TIK+ + 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  184  REGIS  188
             EG+S
Sbjct  180  SEGVS  184

333) H16_B0019 in NC_008314


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (385),  Expect = 8e-25, Method: Compositional matrix adjust.
 Identities = 64/158 (41%), Positives = 102/158 (65%), Gaps = 2/158 (1%)

Query  27   AVRLRLGKPVFFRQVRPGLHGEPFHIVKFRTM-TDACGPDGELLPDPERLTGFGALLRAT  85
            A+++    P+ F+Q RPG+    F I KFR+M  D+     + L  ++ +T  G ++R T
Sbjct  27   AIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKT  86

Query  86   SLDELPELWNVVKGDMSLVGPRP-LLMEYLPLYTPEQARRHLVRPGITGLAQISGRNAIS  144
            SLDELP+L N++KGDM++VGPRP L  +Y  +    +   HLV+PG+TGLAQ+ GR+  +
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  145  WEEKFRLDVWYVDHVSVWLDMVILWKTVTKVVAREGIS  182
             ++K + D  YV++ S  LDM I+ KT+ + ++ EG+S
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

334) FN1695 in NC_003454


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (384),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 77/177 (44%), Positives = 120/177 (68%), Gaps = 11/177 (6%)

Query  8    KRLFDIVASFIGIIVFFPLMLLIGIIIKLTSKGPVIFKQKRLTKGMKEFTILKFRSMKVD  67
            KR+FDI +S+ +II+F+PL++L++I IK+ SKGP++FKQ R     K F I KFRSM+  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ-  60

Query  68   FDKGAVGIQVKGSSQSITPIGKFIRKTKLDELPQLFNIIMGDMSFIGPRPELPRRLKYYL  127
             D   V+ +  ++++ IT  GKFIRKT LDELPQLFNI+ GDM+ +GPRP L  +  Y L
Sbjct  61   -DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQ--YEL  117

Query  128  EEDK---RVFLVRSGISSPASIIFSDEEYLMNQVKEPEKFYLEQVMPYKIKLNLYYI  181
             E +    V LV++G+++ A ++ + ++   +Q  + +KFY+E+     +KL++Y I
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVM-GRDNNTDDQKVQYDKFYVENQ---SFKLDMYII  170

335) ABO_0925 in NC_008260


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (384),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 63/152 (42%), Positives = 103/152 (68%), Gaps = 2/152 (1%)

Query  35   SPVLFRQVRPGMDGRAFQMAKFRTM-TDARGTNGELLPDADRLTGFGQFLRSSSLDELPE  93
            +P++F+Q RPG+  + F++ KFR+M  D+     + L  AD +T  G+F+R +SLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  94   LWNVLKGDMSLVGPRPLLMEYLPLYSDR-QARRHEVRPGITGWAQVNGRNALSWDEKFEL  152
            L N+LKGDM++VGPRP L +   L   R +   H V+PG+TG AQV GR+  + D+K + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  153  DVWYVENRTLWLDIKILFLTVWKVIKRDDINQ  184
            D  YVEN+++ LD+ I++ T+ + I  +++++
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

336) KSO_003340 in NC_020272


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  106 bits (384),  Expect = 9e-25, Method: Compositional matrix adjust.
 Identities = 70/169 (42%), Positives = 113/169 (67%), Gaps = 14/169 (8%)

Query  3    VKRVFDIAAATLLLCGASVIL--LFAMA-AVRCAIGSPVLFKQTRPGHNGRPFTLYKLRT  59
            +KR+FDI ++   L +  ++L  LF ++ A++    +P++FKQ RPG + + F +YK+R+
Sbjct  1    MKRIFDIFSS---LYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRS  57

Query  60   MTDARDENGVLLPDHLR----LTKTGRLIRKLSIDELPQLFNVLKGDISLVGPRP-LLMD  114
            M   R++   +  D+L     +TKTG++IRK S+DELPQLFN+LKGD+++VGPRP L  +
Sbjct  58   M---RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQ  114

Query  115  YLPLYTAEQARRHEVKPGITGWAQVNGRNAISWEEKFKLDVWYVDNRTF  163
            Y  +    +   H VKPG+TG AQV GR+  + ++K + D  YV+N++F
Sbjct  115  YELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSF  163

337) Neut_0185 in NC_008344


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 69/146 (48%), Positives = 105/146 (72%), Gaps = 2/146 (1%)

Query  1    MLRLLDIVLAVLGILVTLPLLTILYVVGLFDTRSPL-FRQIRVGRQQKPFVLVKFRTMRP  59
            M R++DI  ++ +I++ LPLL ++ +   +++++P+ F+Q R G ++K F + KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   GTASVATH-LADVSAITSFGNFLRKTKLDELPQLWNVLKGEMSLVGPRPCLPNQLELIGE  118
            +T++VAT+ L     IT  G+F+RKT LDELPQL N+LKG+M++VGPRP L NQ ELI  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  RVQRRVFDVRPGITGLAQIQGIDMST  144
            R +  V  V+PG+TGLAQ+ G D +T
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNT  146

338) WcaJ in NC_003869


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 71/152 (47%), Positives = 104/152 (69%), Gaps = 6/152 (3%)

Query  39   PVIYKQTRAGFKGKPFTIYKFRTMTNEKDEYG-NLLPDEKRLTKMGKFLRSTSLDELPEL  97
            P+++KQ R+G K K F IYKFR+M ++  + + + L     +TK GKF+R TSLDELP+L
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  98   FNVLKGDMSLVGPRPLLMEYLNYYTEE---QMRRHDVKPGITGWAQVNGRNSLSWEEKFK  154
            FN+LKGDM++VGPRP L  Y +Y   E   ++  H VKPG+TG AQV GR++ + ++K +
Sbjct  95   FNILKGDMAVVGPRPAL--YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQ  152

Query  155  LDVWYVDNWSLWLDFKILFLTLIKVIKREGLS  186
             D  YV+N S+ LD  I++ T+ + I  EG+S
Sbjct  153  YDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

339) Dd1591_3387 in NC_012912


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (382),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 66/155 (43%), Positives = 108/155 (70%), Gaps = 2/155 (1%)

Query  1    MLRVLDILLALVGVLCLWPVMLIVYVLGLFDTGSP-VFIQQRVGRHQRPFNLIKFRTMAV  59
            M R++DI+ +L +++ + P++++V +   +++ +P VF Q+R G  ++ F++ KFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   ATESVAT-HLASRSSVTRLGAFLRKTKLDELPQLINVLKGEMSLVGPRPCLFNQQELIAE  118
             T +VAT +L +   +T+ G F+RKT LDELPQL+N+LKG+M++VGPRP L+NQ ELI  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  RQARGVFEVLPGITGLAQVNAIDMSTPQKLAEWDQ  153
            R    V  V PG+TGLAQV + D +T ++  + D+
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDK  155

340) epsL in NC_022075


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (382),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 69/168 (42%), Positives = 112/168 (67%), Gaps = 14/168 (8%)

Query  4    KRVFDIAAAVLLLCGASVIL--LFAMA-AVRCAIGSPVLFKQTRPGHNGRPFTLYKLRTM  60
            KR+FDI ++   L +  ++L  LF ++ A++    +P++FKQ RPG + + F +YK+R+M
Sbjct  2    KRIFDIFSS---LYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  61   TDARDENGVLLPDHLR----LTKTGRLIRKLSIDELPQLFNVLKGDISLVGPRP-LLMDY  115
               R++   +  D+L     +TKTG++IRK S+DELPQLFN+LKGD+++VGPRP L  +Y
Sbjct  59   ---RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY  115

Query  116  LPLYTAEQARRHEVKPGITGWAQINGRNAISWEEKFKLDVWYVDNRTF  163
              +    +   H VKPG+TG AQ+ GR+  + ++K + D  YV+N++F
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSF  163

341) epsL in NC_017912


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (382),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 69/168 (42%), Positives = 112/168 (67%), Gaps = 14/168 (8%)

Query  4    KRVFDIAAAVLLLCGASVIL--LFAMA-AVRCAIGSPVLFKQTRPGHNGRPFTLYKLRTM  60
            KR+FDI ++   L +  ++L  LF ++ A++    +P++FKQ RPG + + F +YK+R+M
Sbjct  2    KRIFDIFSS---LYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM  58

Query  61   TDARDENGVLLPDHLR----LTKTGRLIRKLSIDELPQLFNVLKGDISLVGPRP-LLMDY  115
               R++   +  D+L     +TKTG++IRK S+DELPQLFN+LKGD+++VGPRP L  +Y
Sbjct  59   ---RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY  115

Query  116  LPLYTAEQARRHEVKPGITGWAQINGRNAISWEEKFKLDVWYVDNRTF  163
              +    +   H VKPG+TG AQ+ GR+  + ++K + D  YV+N++F
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSF  163

342) Belba_2092 in NC_018010


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (382),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 128/184 (70%), Gaps = 2/184 (1%)

Query  7    KRILDILIASALFLVFSPIFLLIWVILMVNNKGYAFYFQDRPGLNGEIFRIIKFKTMK-D  65
            KRI+DI+ +   +++F P+++L+ + + +++KG   + QDRPG++  +F+I KF++M+ D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  66   AFDREGKPLSDALRITKVGAIIRKTSFDELPQLLNVLRGDMSMVGPRPLL-VDYLLLYDE  124
            + +     L  A  ITK G +IRKTS+DELPQL+N+L+GDM++VGPRP L  +Y L+   
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  125  SQSKRHDVKPGITGWAQINGRNSINWERKFELDTWYVNNFNLFLDIKILILTFFNVIQGK  184
            ++ + H VKPG+TG AQ+ GR++   ++K + D  YV+N ++ LD+ I+  T+ N I + 
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  185  GVSQ  188
            GVS+
Sbjct  182  GVSH  185

343) CTC02253 in NC_004557


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (383),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 81/194 (42%), Positives = 127/194 (66%), Gaps = 13/194 (6%)

Query  23   LKRLMDIILSFIGIVILSPIYLILIVAIKIDSKGPAIFKQVRVGKDEKEFVIYKFRTMVV  82
            +KR+ DI+ S+ +I+I+ P+ +++ +AIKI+SKGP +FKQ R G  +K F IYKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  83   NAEKKRSLDINPEDIANFVFQSKEDNRITKVGKFLRKSSLDEIPQLFNVFIGNMSLVGPR  142
            ++ +  +  ++P D             ITK GKF+RK+SLDE+PQLFN++ G+M++VGPR
Sbjct  61   DTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  143  PEIPDVTKYYPKEYAQRL-LVTPGITGLAQVSGRGEIELKKTIYYDLTYIKNFSLWLDVK  201
            P + +      K     + LV PG+TGLAQV GR++    + + YD  Y+ N S+ LD+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  202  ILFKTVFSVFRSEG  215
            I++KT+ + + SEG
Sbjct  169  IIYKTIKNTISSEG  182

344) Solca_0326 in NC_017770


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (382),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 129/184 (71%), Gaps = 2/184 (1%)

Query  7    KRFFDLIIAIPAFIILSPVFLIMSIILAFVNHGSPFFTQARPGKNERIFWVLKFKTMNEN  66
            KR+FD++ ++ A+II+ P+++++SI + + + G+  F Q RPG ++++F + KF++M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   KDK-KGNLLPDPDRLTTVGKFVRKTSLDEIPQLLNVIKGDMTLIGprpllpsylplyND-  124
              +   + L  +D +T  GKF+RKTSLDE+PQL+N++KGDM+++GPRP L +   L +  
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  125  TQKRRHEVTPGITGWAQVNGRNTLSWTEKFNYDVWYVDHLSFGLDLRILMLTIKKVLKSE  184
            T+   H V PG+TG AQV GR+  +  +K +YD  YV++ SF LD+ I+  TIK+ + SE
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  185  GINQ  188
            G+++
Sbjct  182  GVSH  185

345) BDI_0428 in NC_009615


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (381),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 70/155 (46%), Positives = 103/155 (67%), Gaps = 2/155 (1%)

Query  25   KIRLGSPILFTQDRPGKKGKVFKLYKFRSM-IDKCDKEGNPLPDDERLPKFGRILRSTSL  83
            KI   +PI+F QDRPG K K+FK+YKFRSM  D  +   + L   + + K G+++R TSL
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSL  88

Query  84   DELPEIFNILKGDMSVVGPRP-LLVEYLPYYTKEELRRHEQRPGLTGWAQINGRNATGWD  142
            DELP++FNILKGDM+VVGPRP L  +Y     + ++  H  +PGLTG AQ+ GR+    D
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  143  ERLQQDVYYVDHCSLFLDCKIILRTVLKVVKRSDV  177
            +++Q D +YV++ S+ LD  II +T+ + +   +V
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

346) Desmer_4118 in NC_018515


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 69/159 (44%), Positives = 104/159 (66%), Gaps = 6/159 (3%)

Query  37   KLGSRGPLLFKQERPGKDGVVFTIYKFRTMRLEREK-DGRPLADMERLTPVGGILRKLSV  95
            K+ S+GP++FKQ+RPG    +F IYKFR+MR +  +     L   + +T  G ++RK S+
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSL  88

Query  96   DELPQLFNILKGDMSFIGPRP-LMVQY--LERYTPEQMRRHEVTPGISGWAQIHGRNQVG  152
            DELPQLFNILKGDM+ +GPRP L  QY  +E+    ++  H V PG++G AQ+ GR++  
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEK--RTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  153  WETRFKYDVWYVEHISFCLDLRIFLKTLAIVLLRSGVNQ  191
             + + +YD  YVE+ SF LD+ I+ KT+   +   GV++
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

347) M636_20600 in NC_021848


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 71/164 (44%), Positives = 109/164 (67%), Gaps = 4/164 (2%)

Query  19   PVLLIVTIIGLFDTGSPI-FVQERVGRNKRPFKLIKFRTMSVETKSVAS-HLASNASITK  76
            P+L++V+I   +++ +PI F Q+R G +++ FK+ KFR+M  +T +VA+ +L +   ITK
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITK  78

Query  77   LGSFLRKTKIDELPQLINVLKGEMSLVGPRPNLFNQHELIIERDALGVYDVLPGVTGLAQ  136
             G F+RKT +DELPQL+N+LKG+M++VGPRP L+NQ ELI  R  + V  V PG+TGLAQ
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQ  138

Query  137  VQNIDMSTPSLLAKTDKKMID--TLTLKDYFKYIMMTATGSGSG  178
            V   D +T     + DK  ++  ++ L  Y+ Y  +  T S+ G
Sbjct  139  VMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

348) HD73_5677 in NC_020238


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 128/185 (70%), Gaps = 7/185 (3%)

Query  36   ILDVIFALLGLIILAPVMLIFSLLIILESPGSPFYLQERLGMNGRKFNVIKLRSMRNDAE  95
            I+D++ +L ++II+ P++++ S+ I +ES G+  + Q+R G++ + F++ K+RSMR+D+ 
Sbjct  4    IFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP  63

Query  96   KNGAKWAEKNDPRITKIGLFIRKTRIDELPQLFNILKGEMSLVGPRPERPMFTEKFE--R  153
            + ++ + +  D  ITK G FIRKT +DELPQLFNILKG+M++VGPRP  +++ + +E   
Sbjct  64   NVATDRLDPAD-YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYNQ-YELIE  119

Query  154  EIPGFKKRLEVKPGLTGWAQVNGGYEITPREKLRLDIYYINNSSLLLDFKIILKTIKVVC  213
                 + +L VKPGLTG AQV G  + T  +K++ D +Y++N S+ LD  II KTIK   
Sbjct  120  KRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  214  TGDGA  218
            +++G 
Sbjct  179  SSEGV  183

349) LGMK_03580 in NC_015734


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  105 bits (380),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 64/156 (42%), Positives = 106/156 (68%), Gaps = 1/156 (0%)

Query  43   RLTTKDSAFYQQERVGQYGKTFQIYKFRTLPKNTPILVGKQRVKIRNRVSKFARFLRSTS  102
            ++ +K++  ++Q+R G   K F+IYKFR++ ++TP  V+ +R+   + ++K ++F+R TS
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPN-VATDRLDPADYITKTGKFIRKTS  87

Query  103  IDELPQLINVVKGDMSLIGPRPVVPQEAELTDLREASGALSVKPGLTGLAQVNGRKHLGN  162
            +DELPQL+N++KGDM+++GPRP + ++ EL + R       VKPGLTGLAQV GR +  +
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  163  MQKADFDAKYAERLTFLGDVAIILRTLPIIIERDGV  198
             QK ++D  Y E  +F  D+ II +T+   I  +GV
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

350) BCAH187_A5447 in NC_011658


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (379),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 66/130 (51%), Positives = 91/130 (70%), Gaps = 2/130 (1%)

Query  1    MRIDTPKDTPTHLLENPEMYITKLGKFLRKTSLDELPQILNIIKGEMSIVGPRPALWNQY  60
            MR DTP+ +  +L  +P  YITK GKF+RKTSLDELPQ++NI+KG+M++VGPRPAL NQY
Sbjct  58   MRQDTPNVATDRL--DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY  115

Query  61   DLIKERDKYGANDIIPGLTGWAQINGRDELPIDVKAGLDGEYAQKISFLLDIKIFLKTVI  120
            +LI  R +   + + PGLTG AQ+ GRD+   D K   D  Y ++ SF LD+ I+ KT+ 
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIK  175

Query  121  SVAKSDGVKE  130
            +   S+GV +
Sbjct  176  NTISSEGVSH  185

351) Dtur_0586 in NC_011661


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (379),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 82/187 (44%), Positives = 123/187 (66%), Gaps = 8/187 (4%)

Query  6    LKRIIDIIGSLIGLvvaspiivvisiiiyiTMGRPIFFKQVRPGLKGKPFVIYKFRTM-L  64
            +KRI+DI++SL ++++  P++ ++SI I I    PI FKQ RPG+K K F IYKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   DLRDENGNLLPDEKRLTTIGKFLRSTTLDELPEFWNVLKGDMSLVGPRPLLMEYLDRYTP  124
            D  +   + L     +T  GKF+R T+LDELP++ N+LKGDM++VGPRP L    ++Y  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYEL  117

Query  125  EQARR----HNVKPGMTGWAQINGRNAITWEEKFKLDVWYVDNWNILLDLKIIFLTILKV  180
             + R     H VKPG+TG AQ+ GR+  T ++K + D  YV+N ++ LD+ II+ TI + 
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNT  177

Query  181  LKREGIS  187
            +  EG+S
Sbjct  178  ISSEGVS  184

352) Sta7437_4167 in NC_019748


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (379),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 71/174 (41%), Positives = 114/174 (66%), Gaps = 10/174 (5%)

Query  23   FSPVILFVAIAVYLNMGSPVIFAQNRPGKHGRIFKFYKFRTM-TDAQDAEGNLLPDEERL  81
            F P++++V+IA+ ++  +P++F Q+RPG   ++FK+YKFR+M  D+ +   + L   + +
Sbjct  17   FLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYI  76

Query  82   TEFGQFLRRTSLDELPQLWNVLKGDMSFVGPRPLLVRYLNRYTPEQARR----HEVTPGI  137
            T  G+F+R+TSLDELPQL N+LKGDM+ VGPRP L  Y N+Y   + R     H V PG+
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL--Y-NQYELIEKRTNVNVHLVKPGL  133

Query  138  TGWAQINGRRQLDGDWEKKFQLDVWYVDHWNLWLDLKILLMTILVVFKREDISQ  191
            TG AQ+ GR   +   ++K Q D  YV++ ++ LD+ I+  TI   +  E++S+
Sbjct  134  TGLAQVMGRD--NNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

353) wcgN in NC_017025


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (378),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 68/153 (45%), Positives = 106/153 (70%), Gaps = 14/153 (9%)

Query  30   FVQRRPGKNCKVFSIIKFKTM-NDKKDASGKLLHDSERLTAVGKFVRKTSLDEIPQLLNV  88
            F Q RPG + K+F I KF++M +D  + +   L+ ++ +T  GKF+RKTSLDE+PQL+N+
Sbjct  38   FKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNI  97

Query  89   IKGDMSLIGPRPLLTDYVHLYNEFQ--NRR-----HEVKPGITGWAQVNGRNAISWDKKF  141
            +KGDM+++GPRP       LYN+++  ++R     H VKPG+TG AQV GR+  + D+K 
Sbjct  98   LKGDMAVVGPRP------ALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  142  ELDVYYVDHISFGLDIKIIFLTIKKVLIREGIN  174
            + D +YV++ SF LD+ II+ TIK+ +  EG++
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

354) Cha6605_4205 in NC_019697


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (377),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 66/155 (43%), Positives = 99/155 (64%), Gaps = 8/155 (5%)

Query  51   SPVVFTQTRPGKNGKIFTVFKFRTMTDDC-DAQGKLLSDEERLIPLGQVLRKASLDELPQ  109
            +P+VF Q RPG + K+F ++KFR+M +D  +     L   + +   G+ +RK+SLDELPQ
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  110  LWNVLRGDMSFVGPRPLLVRYLERYSPDQARR----HDVRPGITGWAQVNGRNALTWDEK  165
            L N+L+GDM+ VGPRP L    ++Y   + R     H V+PG+TG AQV GR+  T D+K
Sbjct  94   LFNILKGDMAVVGPRPAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  166  FKLDLWYVDNWSLWLDLKILLMTVGKVIKREGISQ  200
             + D  YV+N S+ LD+ I+  T+ + I  EG+S+
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

355) Clopa_0854 in NC_021182


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (377),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 79/185 (43%), Positives = 132/185 (72%), Gaps = 13/185 (7%)

Query  25   LKRLLDIFGsvigiillspviiiTAIAIKLDSKGPVLFSQERVGKNGKLFKMYKFRSMVV  84
            +KR++DIF+S+ +II++ P++++ +IAIK++SKGP++F Q+R G + KLFK+YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  85   NAEELLVKLKDKNEMSGPMFKMKEDPRITRVGKFIRKTSLDELPQLFNIIKGDMSMVGPR  144
            ++ ++       + +  + +       IT+ GKFIRKTSLDELPQLFNI+KGDM++VGPR
Sbjct  61   DTPNV-----ATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  145  PNLPSEVAEFSDYHKLKL-LAKPGLTCYWQVMGRNEIGFEDWMKLDIKYIEERNIWIDIK  203
            P L ++   +    ++++ L KPGLT   QVMGR++   ++ ++ D  Y+E++++ +D+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  204  LIVKT  208
            +I KT
Sbjct  169  IIYKT  173

356) WA5_0342 in NC_020519


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (379),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 122/189 (65%), Gaps = 13/189 (6%)

Query  11   VKRAIDIGVSGVGLIISAPIQLAIAAVVLRAHGR-PILFRQPRPGKDGVVFEMIKFRTML  69
            +KR +DI  S  ++II  P+ L + ++ ++ +++ PI+F+Q RPG    +F + KFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIFLPL-LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  70   EPDEKHVTD----EQRLTKVGKLLRETSLDELPTLWNVFKGDMSLVGPRPLLVSYLEHYS  125
            +   +  TD     + +TK GK++R TSLDELP L N++KGDM++VGPRP L    ++Y 
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYE  116

Query  126  SEQARR----HEVRPGITGLAQVNGRNQTTWDERLKLDVEYVDRCSLKLDFKILIATVKT  181
              + R     H V+PG+TGLAQV GR++ T D++++ D  YV+  S+KLD  I+  T+K 
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  182  VLSKKGISN  190
             +S  G+S+
Sbjct  177  TISSEGVSH  185

357) Cgl0349 in NC_003450


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (379),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 122/189 (65%), Gaps = 13/189 (6%)

Query  11   VKRAIDIGVSGVGLIISAPIQLAIAAVVLRAHGR-PILFRQPRPGKDGVVFEMIKFRTML  69
            +KR +DI  S  ++II  P+ L + ++ ++ +++ PI+F+Q RPG    +F + KFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIFLPL-LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  70   EPDEKHVTD----EQRLTKVGKLLRETSLDELPTLWNVFKGDMSLVGPRPLLVSYLEHYS  125
            +   +  TD     + +TK GK++R TSLDELP L N++KGDM++VGPRP L    ++Y 
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYE  116

Query  126  SEQARR----HEVRPGITGLAQVNGRNQTTWDERLKLDVEYVDRCSLKLDFKILIATVKT  181
              + R     H V+PG+TGLAQV GR++ T D++++ D  YV+  S+KLD  I+  T+K 
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  182  VLSKKGISN  190
             +S  G+S+
Sbjct  177  TISSEGVSH  185

358) cg0419 in NC_006958


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (379),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 122/189 (65%), Gaps = 13/189 (6%)

Query  11   VKRAIDIGVSGVGLIISAPIQLAIAAVVLRAHGR-PILFRQPRPGKDGVVFEMIKFRTML  69
            +KR +DI  S  ++II  P+ L + ++ ++ +++ PI+F+Q RPG    +F + KFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIFLPL-LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  70   EPDEKHVTD----EQRLTKVGKLLRETSLDELPTLWNVFKGDMSLVGPRPLLVSYLEHYS  125
            +   +  TD     + +TK GK++R TSLDELP L N++KGDM++VGPRP L    ++Y 
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYE  116

Query  126  SEQARR----HEVRPGITGLAQVNGRNQTTWDERLKLDVEYVDRCSLKLDFKILIATVKT  181
              + R     H V+PG+TGLAQV GR++ T D++++ D  YV+  S+KLD  I+  T+K 
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  182  VLSKKGISN  190
             +S  G+S+
Sbjct  177  TISSEGVSH  185

359) cgp_0419 in NC_022040


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (379),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 76/189 (41%), Positives = 122/189 (65%), Gaps = 13/189 (6%)

Query  11   VKRAIDIGVSGVGLIISAPIQLAIAAVVLRAHGR-PILFRQPRPGKDGVVFEMIKFRTML  69
            +KR +DI  S  ++II  P+ L + ++ ++ +++ PI+F+Q RPG    +F + KFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIFLPL-LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  70   EPDEKHVTD----EQRLTKVGKLLRETSLDELPTLWNVFKGDMSLVGPRPLLVSYLEHYS  125
            +   +  TD     + +TK GK++R TSLDELP L N++KGDM++VGPRP L    ++Y 
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYE  116

Query  126  SEQARR----HEVRPGITGLAQVNGRNQTTWDERLKLDVEYVDRCSLKLDFKILIATVKT  181
              + R     H V+PG+TGLAQV GR++ T D++++ D  YV+  S+KLD  I+  T+K 
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  182  VLSKKGISN  190
             +S  G+S+
Sbjct  177  TISSEGVSH  185

360) OB2892 in NC_004193


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (378),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 131/184 (72%), Gaps = 2/184 (1%)

Query  13   VKRLLDFILSSIAIVILSPILLIVTILVRLKLGSPVLFKQERPGLDERIFTMYKFRTM-T  71
            +KR++D++ S  AI+I+ P+L++V+I +++   +P++FKQ+RPG+ +++F +YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  72   NAKDEHGELLPDSDRLCRFGKFLRSTSLDELPELINIVKGDMSiigprpllirylplyNE  131
            ++ +   + L  +D + + GKF+R TSLDELP+L+NI+KGDM+++GPRP L     L + 
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  132  QQK-RRHEVRPGLSGLAQINGRNAIVWKQKFDFDVQYVDNISFLLDCKVFFLTFKKVFIR  190
            + +   H V+PGL+GLAQ+ GR+     QK ++D  YV+N SF LD  +++ T+K+ +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  191  EGIN  194
            EG++
Sbjct  181  EGVS  184

361) BMWSH_4117 in NC_017138


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (376),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 83/193 (44%), Positives = 124/193 (65%), Gaps = 28/193 (14%)

Query  34   KRFLDIVLSLIGLIFLLPVFIIVAICIKIEDKNGPVLFSQTRVGKNQSEFTMYKFRSMVS  93
            KR++DI  SL ++I++LP++++V+I IKIE K GP++F Q R G ++  F +YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESK-GPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  94   NAeellenlleqneTTGAMFKMKNDPRVTKIGRFIRKTSIDELPQLINVLKGDMSLVGPR  153
            ++ ++  +            ++     +TK G+FIRKTS+DELPQL+N+LKGDM++VGPR
Sbjct  61   DTPNVATD------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  154  PPLKREVEVYTQYQ--KQR-----LLIQPGCTGLWQVSGRSNIGFEDMVELDLKYIVERS  206
            P+L      Y QY+   +R      L++PG TGL QV GR N   ++ V+ D K+ VE  
Sbjct  109  PAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYD-KFYVENQ  161

Query  207  IFK-DILIIIKTV  218
             FK D+ II KT+
Sbjct  162  SFKLDMYIIYKTI  174

362) Coch_0716 in NC_013162


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (377),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 76/185 (42%), Positives = 129/185 (70%), Gaps = 2/185 (1%)

Query  6    IKPALDFLTALIAFIVLSPIFVVVMVGLWFANNGKPFFYQLRPGKGERIFRIIKFKTM-N  64
            +K  +D++++L A+I++ P++ +V +++ + ++G   F Q RPG  +++F+I KF++M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   DRCDANGQLLPDAKRLTKIGAFVRKTSLDEIPQLLNVLKGDMSVIGprpllpqylplyNE  124
            D  +   + L  A  +TK G F+RKTSLDE+PQL+N+LKGDM+V+GPRP L +   L + 
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  125  -TQKRRHEVKPGITGWAQVNGRNAISWEKKFELDVWYVDHQSFVLDLKILFLTVKKVFIR  183
             T+   H VKPG+TG AQV GR+  + ++K + D  YV++QSF LD+ I++ T+K+ +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  184  EGISQ  188
            EG+S+
Sbjct  181  EGVSH  185

363) PBPRA2697 in NC_006370


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  104 bits (376),  Expect = 4e-24, Method: Compositional matrix adjust.
 Identities = 75/187 (41%), Positives = 125/187 (67%), Gaps = 10/187 (5%)

Query  7    RVLDLSFAFIGLLILWPILLVVCIIGYFDSGSP-VFLQQRVGRNKKPFTLIKLRTMPINT  65
            R++D+  ++ +++I+ P+L++V I   ++S +P VF Q+R G ++K F + K+R+M  +T
Sbjct  3    RIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDT  62

Query  66   QSVATHMVDASS-VTRYGHFLRKTKLDELPQLINVLKGEMSFVGPRPCLFNQQELIKARE  124
             +VAT+ +D++  +T+ G F+RKT LDELPQL+N+LKG+M+ VGPRP L+NQ ELI  R 
Sbjct  63   PNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRT  122

Query  125  HRGVLTVLPGITGLAQVNGIDMSVPEKLAKVDEEMI----RTFSLTAYFTYILQTATGKG  180
            +  V  V PG+TGLAQV G D +  ++  KV+ + +    ++F L  Y+ Y  +T     
Sbjct  123  NVNVHLVKPGLTGLAQVMGRDNNTDDQ--KVQYDKFYVENQSFKLDMYIIY--KTIKNTI  178

Query  181  SGDKIKH  187
            S++ + H
Sbjct  179  SSEGVSH  185

364) Clopa_0847 in NC_021182


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (374),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 81/185 (44%), Positives = 131/185 (71%), Gaps = 13/185 (7%)

Query  28   LKRIIDIFGSLVGIILLSPVFiiitiaikiDSKGPVIFSQYRVGKNDKLFKMYKFRSMVP  87
            +KRI+DIF+SL +II++ P++++++IAIKI+SKGP++F Q R G ++KLFK+YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  88   DAEKLLIKLKDKNEMSGPMFKMKEDPRITRIGKFIRRTSIDELPQLFNILKGHMSFVGPR  147
            D+ ++       + +  + +       IT+ GKFIR+TS+DELPQLFNILKG+M+ VGPR
Sbjct  61   DTPNV-----ATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  148  PNLPREVANFSNYHKLKL-LAKPGLTCYWQVMGRNEIDFEDWMKLDIKYIEERNTWVDIK  206
            P L  +   + +  ++++ L KPGLT   QVMGR++   ++ ++ D  Y+E+++  +D+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  207  LIIKT  211
            +I KT
Sbjct  169  IIYKT  173

365) pss in NC_015717


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (374),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 83/197 (43%), Positives = 128/197 (65%), Gaps = 26/197 (13%)

Query  32   IKRAVDVFAASTLIVVASPILLGAALAIKLTSRGPILFKQSRYGLNNELFGIYKFRSMRI  91
            +KR  D+F++   I++  P+L+  ++AIK+ S+GPI+FKQ R G++N LF IYKFRSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  92   DLGDATGVRQTKADDPRVTSVGKILRRTNIDELPQLFNVLFGDMSLVGPRPHVPGMRAGG  151
            D  + +  R   AD   +T  GK++R+T++DELPQLFN+L GDM++VGPRP         
Sbjct  61   DTPNVATDRLDPADY--ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA--------  110

Query  152  LLYE--ELVPHYFKR-----HRMRPGITGLAQINRLRGSTTDAKFAKARIEYDLAYAESW  204
             LY+  EL+    KR     H ++PG+TGLAQ+   R++ TD +    +++YD  Y E+ 
Sbjct  111  -LYNQYELIE---KRTNVNVHLVKPGLTGLAQVMG-RDNNTDDQ----KVQYDKFYVENQ  161

Query  205  SLFLDFRILWQTFKSEV  221
            S+ LD  I+ +T+K+ +
Sbjct  162  SFKLDMYIIYKTIKNTI  178

366) M634_03155 in NC_021847


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (374),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 64/151 (43%), Positives = 102/151 (68%), Gaps = 2/151 (1%)

Query  35   SPVLFRQTRPGLSGKPFEMVKFRTMKDAVDQQGTP-LPDSERMTPFGDKLRSSSLDELPE  93
            +P++F+Q RPG+  K F + KFR+M++   + +T  L  ++ +T  G  +R +SLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  94   LWNVLKGEMSLVGPRP-LLMQYLPLYSKEQSRRHDVRPGVTGWAQVNGRNAITWDEKFKL  152
            L N+LKG+M++VGPRP L  QY  +  + +   H V+PG+TG AQV GR+  T D+K + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  153  DVWYIDNRTFWLDVKILLLTIKKVVIKEGIS  183
            D  Y++N++F LD+ I+  TIK+ +  EG+S
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

367) Acear_2157 in NC_014378


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (375),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 81/200 (41%), Positives = 122/200 (61%), Gaps = 17/200 (8%)

Query  33   VSRGLDIVLASVGMILLAPVFIIVAYKIKKNDGGNIFFKHTRIGKDTEEFKMYKFRTMVP  92
            + R +DI  +  ++I++ P++++V+  IK +  G I FK+ R G     FK+YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  93   NAEEKLQEVLENDEELRKEFYENFKLKDDPRITEIGDFLRKTSLDELPQLINIIKGDMSL  152
            ++ +   + L+  +      Y          IT  G F+RKTSLDELPQL+NI+KGDM++
Sbjct  61   DTPNVATDRLDPAD------Y----------ITKTGKFIRKTSLDELPQLFNILKGDMAV  104

Query  153  VGPRPVVDDELEMHYKGTGDIVFSVKPGLTGMWQVNGRSDVEDYEERIALDLKYVKERSL  212
            VGPRP + ++ E+  K T   V  VKPGLTG+ QV GR +  D ++++  D  YV ++S+
Sbjct  105  VGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD-DQKVQYDKFYVENQSF  163

Query  213  LLDMKIILKTIKSVIKREGA  232
             LDM II KTIK+ I  EG 
Sbjct  164  KLDMYIIYKTIKNTISSEGV  183

368) Bache_2447 in NC_014933


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (375),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 75/184 (41%), Positives = 122/184 (67%), Gaps = 3/184 (1%)

Query  7    KRLIDIVFVFCVLAIIWPILLFVTLWLQFANKGAGAFFTQERPGRNGKKFRVIKFKTMTD  66
            KR++DI   +  + I+ P+L++V++ +++ +KG+  F  Q+RPG + K F++ KF++M +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVF-KQDRPGVKNKLFKIYKFRSMRQ  60

Query  67   E-RDSDGKLLPDAERLTKVGSFVRSTSIDELPQLINVLKGDMALIGprpllpqylplySK  125
            +  +     L  A+ +TK G F+R TS+DELPQL+N+LKGDMA++GPRP L +   L  K
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  126  -EQARRHEVRPGITGWAQVNGRNAISWAKKFELDVWYVDHCSFLLDLKIVLMTIKKVFVR  184
              +   H V+PG+TG AQV GR+  +  +K + D  YV++ SF LD+ I+  TIK+ +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  185  EGIS  188
            EG+S
Sbjct  181  EGVS  184

369) H045_04725 in NC_020209


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (375),  Expect = 5e-24, Method: Compositional matrix adjust.
 Identities = 61/151 (41%), Positives = 103/151 (69%), Gaps = 2/151 (1%)

Query  35   SPVLFSQVRPGLNAKPFTMLKFRTMR-DAVGSDGKPLPDSMRMTRFGTFLRSSSMDELPG  93
            +P++F Q RPG++ K F + KFR+MR D+       L  +  +T+ G F+R +S+DELP 
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  94   LFNVLKGDMSLVGPRP-LLMEYLPLYSAEQYRRHHVRPGVTGWAQVNGRNSLSWEEKFKL  152
            LFN+LKGDM++VGPRP L  +Y  +    +   H V+PG+TG AQV GR++ + ++K + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  153  DVWYVDNRNLWLDIRVVFLTLKKVVAREGIN  183
            D  YV+N+++ LD+ +++ T+K+ ++ EG++
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

370) epsE1 in NC_014319


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 74/172 (44%), Positives = 120/172 (70%), Gaps = 2/172 (1%)

Query  20   AIILFIPLI-VIGLIIKFTSKGPALFRQERYGMNSKPFLLYKFRSMTDEAPVKANSDFDD  78
            AII+F+PL+ ++++ IK+ SKGP +F+Q+R G+++K F +YKFRSM +++P  A   +D 
Sbjct  13   AIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDP  72

Query  79   ITSYVTPFGMIIRKTSIDELPQLMNIIKGDMSFIGPRPLAKTDSKVLFLRKHNGADQVLP  138
             + Y+T  G +IRKTS+DELPQL NI+KGDM+ +GPRP    +  ++  R +   + V P
Sbjct  73   -ADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKP  131

Query  139  GISGLAQVNGRNNLSDEdkaaydakyaaHLSFRVDMLLTVETFVSVMKRDGI  190
            G++GLAQV GR+N +D++K  YD  Y  + SF++DM +   T+ + +  +G+
Sbjct  132  GLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

371) CA347_141 in NC_021554


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (374),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

372) SAKOR_00105 in NC_022226


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

373) SACOL0114 in NC_002951


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

374) BN843_1320 in NC_021059


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

375) SAS0103 in NC_002953


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

376) MW0103 in NC_003923


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

377) SAOUHSC_00089 in NC_007795


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

378) NWMN_0073 in NC_009641


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

379) SAUSA300_0131 in NC_007793


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

380) USA300HOU_0141 in NC_010079


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

381) SAVC_00385 in NC_016912


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 72/167 (44%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GKFI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

382) VSAL_I3032 in NC_011312


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 75/182 (42%), Positives = 126/182 (70%), Gaps = 4/182 (2%)

Query  1    MIRIIDffaaffgllflWPVLLIVTIIGLFDTGSPI-FIQERVGRNKKPFKLIKFRTMSV  59
            M RI+D+F+++++++++ P+L++V+I   +++ +PI F Q+R G ++K FK+ KFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   ETKSVAS-HLANNASITKLGNFLRKTKIDELPQLINVVKGEMSLVGPRPNLFNQDDLIKE  118
            +T +VA+ +L     ITK G+F+RKT +DELPQL+N++KG+M++VGPRP L+NQ +LI  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  RDALGVYDVLPGVTGLAQVQNIDMSTPQLLAKTDKQMIDTLTIK--DYFKYIIMTATGSG  176
            R  + V  V PG+TGLAQV   D +T +   + DK  ++  ++K   Y+ Y  +  T S+
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  177  SG  178
             G
Sbjct  181  EG  182

383) EHR_03780 in NC_018081


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 84/202 (42%), Positives = 130/202 (65%), Gaps = 26/202 (12%)

Query  36   KRIIDIVFSFIGLVVLSPLLLWIALRIYLEEPGKPIIFSQYRVGKNKQLFKMYKFRSMCV  95
            KRI+DI  S+ +++++ PLL+ +++ I +E  G PI+F Q R G +++LFK+YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKG-PIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  96   DAEKKLPTLLSKNEVEGAMFKMKDDPRVTKFGRFIRKTSLDELPQLWNVLKGEMSLVGPR  155
            D+ +     ++ + ++ A +       +TK G+FIRKTSLDELPQL N+LKG+M++VGPR
Sbjct  61   DTPN-----VATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  156  PSLQREVSQYTKYD--EQRL-----LVKPGCTGLWQINGRSNIGFSEMVMLDLEYIEKRS  208
            P+L      Y +Y+  E+R      LVKPG TGL Q+ GR N    + V  D  Y+E++S
Sbjct  109  PAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQS  162

Query  209  IYIDFKIIYRTFFVILRPEGAC  230
            + +D  IIY+T+   + +EG  
Sbjct  163  FKLDMYIIYKTIKNTISSEGVS  184

384) SFBM_0053 in NC_015913


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 65/159 (41%), Positives = 108/159 (68%), Gaps = 13/159 (8%)

Query  59   KADSKGPVIFSQPRVGKNGKIFKMYKFRSMVENAEDILRELKSKNEMSGPMFKIKHDPRV  118
            K +SKGP++F Q R G + K+FK+YKFRSM +++ ++  +            ++     +
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATD------------RLDPADYI  76

Query  119  TRIGRFIRKTSLDELPQLINVLKGDMSLVGPRPNLPREVKQFDKWM-LDKLVVRPGLTCF  177
            T+ G+FIRKTSLDELPQL+N+LKGDM++VGPRP L  +   ++K+  ++  +V+PGLT +
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  178  WQVMGRNSIGFIEWMKLDIKYVEERNLILDIVLIIKTFR  216
             QVMGR++    + ++ D  YVE++++ LD+ +I KT++
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIK  175

385) MOUSESFB_0053 in NC_017294


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 65/159 (41%), Positives = 108/159 (68%), Gaps = 13/159 (8%)

Query  49   KADSKGPVIFSQPRVGKNGKIFKMYKFRSMVENAEDILRELKSKNEMSGPMFKIKHDPRV  108
            K +SKGP++F Q R G + K+FK+YKFRSM +++ ++  +            ++     +
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATD------------RLDPADYI  76

Query  109  TRIGRFIRKTSLDELPQLINVLKGDMSLVGPRPNLPREVKQFDKWM-LDKLVVRPGLTCF  167
            T+ G+FIRKTSLDELPQL+N+LKGDM++VGPRP L  +   ++K+  ++  +V+PGLT +
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  168  WQVMGRNSIGFIEWMKLDIKYVEERNLILDIVLIIKTFR  206
             QVMGR++    + ++ D  YVE++++ LD+ +I KT++
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIK  175

386) PSE_1165 in NC_016642


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (372),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 68/150 (46%), Positives = 103/150 (69%), Gaps = 2/150 (1%)

Query  41   PIIFKQTRTGQAGRNFQIYKLRSMTDECDEHGA-LLPDAERLTRFGKFLRVWSIDELPGF  99
            PI+FKQ R G   + F+IYK+RSM ++  + ++  L  A+ +T+ GKF+R  S+DELP +
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  100  INVLKGDMSIVGPRPQLASFLELYSER-QLRRHLVKPGITGWAQVNGRNSLDWESRFELD  158
            +N+LKGDM++VGPRP L +  EL   R ++  HLVKPG+TG AQV GR++   + + + D
Sbjct  95   FNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYD  154

Query  159  VWYVENKSFWLDLKIIFLTFIIVFRREGIN  188
              YVEN+SF LD+ II+ T+   +  EG++
Sbjct  155  KFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

387) Sbal117_3015 in NC_017579


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (372),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 68/151 (46%), Positives = 101/151 (67%), Gaps = 3/151 (1%)

Query  31   DTGSPIFIQTRVGKHKKPFNLVKFRTMSKDTASVAS-HLASNSSITKFGVFLRKTKIDEL  89
              G+ +F Q R G  +K F++ KFR+M +DT++VA+ +L +   ITK G F+RKT +DEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  90   PQLINVLKGEMSLVGPRPSLFNQEELIAERDALGVYNVHPGVTGLAQVQNIDMSTPKLLA  149
            PQL+N+LKG+M++VGPRP+L+NQ ELI  R  + V  V PG+TGLAQV   D +T     
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  QTDKQMID--TLTLGRYFKYILMTATGSGNG  178
            Q DK  ++  ++ L+ Y+ Y  +  T S++G
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

388) Sbal_2877 in NC_009052


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (372),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 68/151 (46%), Positives = 101/151 (67%), Gaps = 3/151 (1%)

Query  31   DTGSPIFIQTRVGKHKKPFNLVKFRTMSKDTASVAS-HLASNSSITKFGVFLRKTKIDEL  89
              G+ +F Q R G  +K F++ KFR+M +DT++VA+ +L +   ITK G F+RKT +DEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  90   PQLINVLKGEMSLVGPRPSLFNQEELIAERDALGVYNVHPGVTGLAQVQNIDMSTPKLLA  149
            PQL+N+LKG+M++VGPRP+L+NQ ELI  R  + V  V PG+TGLAQV   D +T     
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  QTDKQMID--TLTLGRYFKYILMTATGSGNG  178
            Q DK  ++  ++ L+ Y+ Y  +  T S++G
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

389) SSUST3_0743 in NC_015433


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (372),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 68/151 (46%), Positives = 103/151 (69%), Gaps = 2/151 (1%)

Query  43   SPVLFKQERPGKNEKIFKMYKFRTMTDEKDE-KGELLPDSVRLTAFGKWLRSTSLDELPE  101
            +P++FKQ+RPG ++K+FK+YKFR+M ++  +   + L  +  +T  GK +R TSLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  102  LFNILKGDMSIVGPRPLL-SKYLPLYSEEQARRHEVRPGLTGYAQANGRNSLNWEEKFVM  160
            LFNILKGDM++VGPRP L ++Y  +    +   H V+PGLTG AQ  GR++   ++K   
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  161  DVEYVDNISFKGDVKIIFQTVIAVFKRSGIS  191
            D  YV+N SFK D+ II++T+   +   G+S
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

390) SH0385 in NC_007168


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (373),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 68/152 (45%), Positives = 101/152 (67%), Gaps = 6/152 (3%)

Query  35   PVFFKQERAGLNGEPFNIIKFRTMK-DKRDSEGKLLPNKDRANWFGDILRSTSIDELPQL  93
            P+ FKQ+R+G++   F+I KFR+M+ D  +     L   D     G ++R TS+DELPQL
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  94   FNVLKGDLSLVGPRPLHIEYNQY--YNDRQKKRLD-VRPGITGLAQINGRNTISWTNKFQ  150
            FN+LKGD+++VGPRP    YNQY   + R +  ++ V+PG+TGLAQ+ GR+  +  +K Q
Sbjct  95   FNILKGDMAVVGPRP--ALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQ  152

Query  151  YDTWYVENMSTILDAYIIYKTFSKVLKRQDIN  182
            YD  YVEN S  LD YIIYKT+ + +  ++++
Sbjct  153  YDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

391) C624_02165 in NC_021351


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (372),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 124/189 (66%), Gaps = 13/189 (6%)

Query  11   VKRAIDIAVSGVGLIISAPIQ-LATAAVVLKTHGQPILFRQKRPGKDGVVFEMVKFRTML  69
            +KR +DI  S  ++II  P+  L + A+ + + G PI+F+Q RPG    +F + KFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKG-PIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  70   EPNAKQVTD----EERLTKVGRFLRATSLDELPSLWNVFKGDMSLVGPRPLLVSYLEHYT  125
            +  ++  TD     + +TK G+F+R TSLDELP L N++KGDM++VGPRP L    ++Y 
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYE  116

Query  126  SEQARR----HEVRPGITGLAQVNGRNSISWDERFKMDVEYVDSRNLVLDIKILIATFKS  181
              + R     H V+PG+TGLAQV GR++ + D++ + D  YV+++++ LD+ I+  T+K+
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  182  VFRSEGISH  190
             + SEG+SH
Sbjct  177  TISSEGVSH  185

392) C629_02165 in NC_021352


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  103 bits (372),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 124/189 (66%), Gaps = 13/189 (6%)

Query  11   VKRAIDIAVSGVGLIISAPIQ-LATAAVVLKTHGQPILFRQKRPGKDGVVFEMVKFRTML  69
            +KR +DI  S  ++II  P+  L + A+ + + G PI+F+Q RPG    +F + KFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKG-PIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  70   EPNAKQVTD----EERLTKVGRFLRATSLDELPSLWNVFKGDMSLVGPRPLLVSYLEHYT  125
            +  ++  TD     + +TK G+F+R TSLDELP L N++KGDM++VGPRP L    ++Y 
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL---YNQYE  116

Query  126  SEQARR----HEVRPGITGLAQVNGRNSISWDERFKMDVEYVDSRNLVLDIKILIATFKS  181
              + R     H V+PG+TGLAQV GR++ + D++ + D  YV+++++ LD+ I+  T+K+
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  182  VFRSEGISH  190
             + SEG+SH
Sbjct  177  TISSEGVSH  185

393) ECBG_00490 in NC_020995


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 73/159 (46%), Positives = 108/159 (68%), Gaps = 2/159 (1%)

Query  35   AILVRINLGNPVFFQQKRPGKDNEIFLMYKFRTMIDKKDKFGK-PLDDEARLTKFGIFLR  93
            +I ++I+   P+ F+Q RPG  N +F +YKFR+M +   + +   LD    +TK G F+R
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIR  84

Query  94   STSLDELPELWNILKGDMSFVGPRPLLVEYLELYSNEQK-KRHNVKPGLTGLAQVNGRNS  152
             TSLDELP+L NILKGDM+ VGPRP L +  EL  +  + + H VKPGLTGLAQV GR++
Sbjct  85   KTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDN  144

Query  153  LSWEEKLNQDIIYVNNITFANDVKIIFKTILKVFLQEGI  191
             + ++K++ D +YV+N +F  D+ II+KTI + +  EG+
Sbjct  145  NTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

394) VV1_0776 in NC_004459


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 66/146 (46%), Positives = 100/146 (69%), Gaps = 2/146 (1%)

Query  19   PILVVVTVIGLFDTGSPI-FVQERVGRSRKPFKLVKFRTMSVDTQSVAS-HLASTSSITK  76
            P+L +V++   +++ +PI F Q+R G   K FK+ KFR+M  DT +VA+ +L ++  ITK
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITK  78

Query  77   LGAFLRKTKIDELPQLINVLKGEMSLVGPRPNLFNQEELIKERDALGVYNVLPGITGLAQ  136
             G F+RKT +DELPQL+N+LKG+M++VGPRP L+NQ ELI  R  + V  V PG+TGLAQ
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQ  138

Query  137  VQNIDMSTPQLLAKTDREMIDTLTIK  162
            V   D +T +   + D+  ++  ++K
Sbjct  139  VMGRDNNTDDQKVQYDKFYVENQSFK  164

395) pglC in NC_012039


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 67/153 (44%), Positives = 106/153 (70%), Gaps = 4/153 (2%)

Query  37   QGSVLFKQARPGLNEKIFYIYKFKTMSDEKDENGE--LLPDELRLKPFGKLIRSLSLDEL  94
            +G+++FKQ RPG+++K+F IYKF++M ++  + +   L P +   K  GK+IR  SLDEL
Sbjct  33   KGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKT-GKFIRKTSLDEL  91

Query  95   PQLFNVLKGDMSFIGPRPLL-VEYLPLYSQEQKKRHEVRPGITGWAQINGRNAISWEQKF  153
            PQLFN+LKGDM+ +GPRP L  +Y  +  + + + H V+PG+TG AQ+ GR+  + +QK 
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  154  KYDVEYVQNCSFSFDLKIFFMTIIKVLKRSGVN  186
            +YD  YV+N SF +D+ I++ TI + +   GV+
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

396) pss in NC_017538


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 87/201 (44%), Positives = 133/201 (67%), Gaps = 27/201 (13%)

Query  58   KRAFDITAASLALLFFAPMLiaisiaikassPGPILFHQYRYGYRNRRFKIYKFRSMRTD  117
            KR FDI ++  A+++F P+L+ +SIAIK  S GPI+F Q R G +N+ FKIYKFRSMR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  118  TGDRSGIRQTVQGDPRVTRVGRILRKTSLDEIPQLINVIKGDMSLVGPRPHVPGMLAANV  177
            T + +  R  ++    +T+ G+++RKTSLDE+PQL+N++KGDM++VGPRP          
Sbjct  62   TPNVATDR--LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP---------A  110

Query  178  LYE--DLVPYYFQR-----HIARPGITGLAQVSGCRGSTAEAGSAISRIDYDLEYIENWS  230
            LY+  +L+    +R     H+ +PG+TGLAQV G   +T +      +++YD  Y+EN S
Sbjct  111  LYNQYELIE---KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQ-----KVQYDKFYVENQS  162

Query  231  LRMDVIIILRTIRREFISGSG  251
            +++D+ II +TI+   IS+ G
Sbjct  163  FKLDMYIIYKTIKNT-ISSEG  182

397) OCAR_6119 in NC_011386


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 87/201 (44%), Positives = 133/201 (67%), Gaps = 27/201 (13%)

Query  58   KRAFDITAASLALLFFAPMLiaisiaikassPGPILFHQYRYGYRNRRFKIYKFRSMRTD  117
            KR FDI ++  A+++F P+L+ +SIAIK  S GPI+F Q R G +N+ FKIYKFRSMR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  118  TGDRSGIRQTVQGDPRVTRVGRILRKTSLDEIPQLINVIKGDMSLVGPRPHVPGMLAANV  177
            T + +  R  ++    +T+ G+++RKTSLDE+PQL+N++KGDM++VGPRP          
Sbjct  62   TPNVATDR--LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP---------A  110

Query  178  LYE--DLVPYYFQR-----HIARPGITGLAQVSGCRGSTAEAGSAISRIDYDLEYIENWS  230
            LY+  +L+    +R     H+ +PG+TGLAQV G   +T +      +++YD  Y+EN S
Sbjct  111  LYNQYELIE---KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQ-----KVQYDKFYVENQS  162

Query  231  LRMDVIIILRTIRREFISGSG  251
            +++D+ II +TI+   IS+ G
Sbjct  163  FKLDMYIIYKTIKNT-ISSEG  182

398) pss in NC_015684


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 87/201 (44%), Positives = 133/201 (67%), Gaps = 27/201 (13%)

Query  58   KRAFDITAASLALLFFAPMLiaisiaikassPGPILFHQYRYGYRNRRFKIYKFRSMRTD  117
            KR FDI ++  A+++F P+L+ +SIAIK  S GPI+F Q R G +N+ FKIYKFRSMR D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  118  TGDRSGIRQTVQGDPRVTRVGRILRKTSLDEIPQLINVIKGDMSLVGPRPHVPGMLAANV  177
            T + +  R  ++    +T+ G+++RKTSLDE+PQL+N++KGDM++VGPRP          
Sbjct  62   TPNVATDR--LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP---------A  110

Query  178  LYE--DLVPYYFQR-----HIARPGITGLAQVSGCRGSTAEAGSAISRIDYDLEYIENWS  230
            LY+  +L+    +R     H+ +PG+TGLAQV G   +T +      +++YD  Y+EN S
Sbjct  111  LYNQYELIE---KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQ-----KVQYDKFYVENQS  162

Query  231  LRMDVIIILRTIRREFISGSG  251
            +++D+ II +TI+   IS+ G
Sbjct  163  FKLDMYIIYKTIKNT-ISSEG  182

399) pglC in NC_022362


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 67/156 (43%), Positives = 105/156 (68%), Gaps = 8/156 (5%)

Query  36   TQGSVIFTQNRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAF----GKIVRSLSL  91
            ++G+++F Q+RPG+ +K+FKIYKF++M   R++  ++ +D L    +    GK++R  SL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYITKTGKFIRKTSL  88

Query  92   DELLQLFNVLKGDMSFVGPRPLLVEYLPLYNKEQKLR-HKVRPGITGWAQVNGRNAISWQ  150
            DEL QLFN+LKGDM+ VGPRP L +   L +K  ++  H V+PG+TG AQV GR+  + +
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  151  KKFELDVYYVKNISFLLDLKIMFLTALKVLKRSGVS  186
            +K + D +YV N SF LD+ I++ T  + +   GVS
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

400) pglC in NC_022352


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 67/156 (43%), Positives = 105/156 (68%), Gaps = 8/156 (5%)

Query  36   TQGSVIFTQNRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAF----GKIVRSLSL  91
            ++G+++F Q+RPG+ +K+FKIYKF++M   R++  ++ +D L    +    GK++R  SL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYITKTGKFIRKTSL  88

Query  92   DELLQLFNVLKGDMSFVGPRPLLVEYLPLYNKEQKLR-HKVRPGITGWAQVNGRNAISWQ  150
            DEL QLFN+LKGDM+ VGPRP L +   L +K  ++  H V+PG+TG AQV GR+  + +
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  151  KKFELDVYYVKNISFLLDLKIMFLTALKVLKRSGVS  186
            +K + D +YV N SF LD+ I++ T  + +   GVS
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

401) pglC in NC_022351


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 67/156 (43%), Positives = 105/156 (68%), Gaps = 8/156 (5%)

Query  36   TQGSVIFTQNRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAF----GKIVRSLSL  91
            ++G+++F Q+RPG+ +K+FKIYKF++M   R++  ++ +D L    +    GK++R  SL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYITKTGKFIRKTSL  88

Query  92   DELLQLFNVLKGDMSFVGPRPLLVEYLPLYNKEQKLR-HKVRPGITGWAQVNGRNAISWQ  150
            DEL QLFN+LKGDM+ VGPRP L +   L +K  ++  H V+PG+TG AQV GR+  + +
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  151  KKFELDVYYVKNISFLLDLKIMFLTALKVLKRSGVS  186
            +K + D +YV N SF LD+ I++ T  + +   GVS
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

402) pglC in NC_022353


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 67/156 (43%), Positives = 105/156 (68%), Gaps = 8/156 (5%)

Query  36   TQGSVIFTQNRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLKAF----GKIVRSLSL  91
            ++G+++F Q+RPG+ +K+FKIYKF++M   R++  ++ +D L    +    GK++R  SL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYITKTGKFIRKTSL  88

Query  92   DELLQLFNVLKGDMSFVGPRPLLVEYLPLYNKEQKLR-HKVRPGITGWAQVNGRNAISWQ  150
            DEL QLFN+LKGDM+ VGPRP L +   L +K  ++  H V+PG+TG AQV GR+  + +
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  151  KKFELDVYYVKNISFLLDLKIMFLTALKVLKRSGVS  186
            +K + D +YV N SF LD+ I++ T  + +   GVS
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

403) Meso_0778 in NC_008254


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 62/147 (43%), Positives = 96/147 (66%), Gaps = 1/147 (0%)

Query  40   IRATSNGPAILAQTRVGRNGSPFRCYKLRTMYVDTPAVPTHEVQQSA-VTPIGRILRNTK  98
            I+  S+GP ++ Q R G +   F+ YK+R+M  DTP V+T+ ++ +  +T  G+++R+T 
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTS  87

Query  99   LDELPQLWNVLKGEMSLVGPRPCLPNQDELIQHRKRLGVLTALPGITGLAQVRGIDMSQP  158
            LDELPQL N+LKG+M++VGPRP L NQ ELI+ R  + V    PG+TGLAQV G D +  
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  159  ALLAETDAEYLRAWSPRLDLQLMLRTV  185
                + D  Y+   S +LD+ ++ +T+
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTI  174

404) SAEMRSA15_00960 in NC_017763


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (370),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 71/167 (43%), Positives = 114/167 (69%), Gaps = 15/167 (8%)

Query  68   AIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKYI  127
            +IAI I+S G  ++ Q R G   KL+KIYK+RSM +++ + ++++ D   D IT+ GK+I
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFI  83

Query  128  RKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTG  181
            RKT +DELPQL+N++KG+M+ +GPRP       L++  E+I  E+R      LV PGLTG
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA------LYNQYELI--EKRTNVNVHLVKPGLTG  135

Query  182  LAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEG  228
            LAQ+ G  + T +QK++YD  Y+++ S+ +++YI  +T+   I++EG
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

405) VVMO6_02765 in NC_014965


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 71/167 (43%), Positives = 112/167 (68%), Gaps = 6/167 (3%)

Query  19   PILVVVTVIGLFDTGSPI-FVQERVGRNRKPFKLVKFRTMSVDTQSVAS-HLASTSSITK  76
            P+L +V++   +++ +PI F Q+R G + K FK+ KFR+M  DT +VA+ +L ++  ITK
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITK  78

Query  77   LGAFLRKTKIDELPQLINVLKGEMSLVGPRPNLFNQEELIKERDALGVYNVLPGITGLAQ  136
             G F+RKT +DELPQL+N+LKG+M++VGPRP L+NQ ELI  R  + V  V PG+TGLAQ
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQ  138

Query  137  VQNIDMSTPQLLAKTDREMIDTLTIK--NYFKYIIMTVTGSGSGDAV  181
            V   D +T +   + D+  ++  ++K   Y+ Y   T+  + S+++V
Sbjct  139  VMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY--KTIKNTISSEGV  183

406) Palpr_0955 in NC_014734


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (371),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 70/174 (41%), Positives = 121/174 (70%), Gaps = 12/174 (6%)

Query  6    IKPILDFILALIGLILLSPVFFALAILIKFDSNGPVFFRQERLGKGGRTFRIFKFRSMVD  65
            +K I+D++ +L ++I++ P++F ++I IK++S+GP+ F+Q+R G   + F+I+KFRSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   HAIEKGTGLETFNGDPRITKIGSFLRKTSLDEIPQLINILLGDMSFIGPRPPVINFPYKI  125
            ++ + +T  + ++    ITK G F+RKTSLDE+PQL+NIL GDM+ +GPRP++    Y  
Sbjct  61   DTPNVAT--DRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL----Y--  112

Query  126  EDYNEFDRRR----FLVKPGISGLAAIRCREIHDWSINIPIDVEYVSKQSFILD  175
            ++Y+ +++R      LVKPG++GLA +  R+ +    ++  D  YV +QSF LD
Sbjct  113  NQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLD  166

407) SVI_1491 in NC_014012


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 67/144 (47%), Positives = 106/144 (74%), Gaps = 2/144 (1%)

Query  7    RTLDFLMAFFGLIITFPILLVVTIIGYFDTGSPI-FIQQRVGKNKKPFNLIKFRTMSVGT  65
            R +D++ +++++II +P+L++V+I   +++ +PI F Q+R G ++K F++ KFR+M  +T
Sbjct  3    RIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDT  62

Query  66   KSVAS-HLANTASITKLGGFLRKTKVDELPQLINVLKGEMSFVGPRPNLFNQEELIQERD  124
             +VA+ +L  +  ITK G F+RKT +DELPQL+N+LKG+M+ VGPRP L+NQ ELI+ R 
Sbjct  63   PNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRT  122

Query  125  SRGVYEVLPGITGLAQVNNIDMST  148
            +  V  V PG+TGLAQV   D +T
Sbjct  123  NVNVHLVKPGLTGLAQVMGRDNNT  146

408) DHBDCA_p2674 in NC_018866


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 71/168 (43%), Positives = 107/168 (64%), Gaps = 25/168 (14%)

Query  30   IKADSEGPAVFRQERVGRNGALFTIYKFRTMVPNADAVMkekiellkkegkFDPDNFIFQ  89
            IK +S GP VF+Q+R G +  LF IYKFR+M  ++  V           +++DP ++I  
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNV---------ATDRLDPADYI--  76

Query  90   DKDDPRITKSGRFLRKSSLDELPQLLNIINGTMSIVGPRPEVPEIVDQYT-PEQRHRLDM  148
                   TK+G+F+RK+SLDELPQL+NI++G M++VGPR   P + +QY   E+R  +++
Sbjct  77   -------TKTGKFIRKTSLDELPQLFNILKGDMAVVGPR---PALYNQYELIEKRTNVNV  126

Query  149  P---PGVTGLAQVNGRSELTLTETLNYDVEYVQNWRFGLDLKILWKTL  193
                PG+TGLAQV GR + T  + ++YD  YV+N  F LD+ I+ KT+
Sbjct  127  HLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

409) DCF50_p2685 in NC_018867


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 71/168 (43%), Positives = 107/168 (64%), Gaps = 25/168 (14%)

Query  30   IKADSEGPAVFRQERVGRNGALFTIYKFRTMVPNADAVMkekiellkkegkFDPDNFIFQ  89
            IK +S GP VF+Q+R G +  LF IYKFR+M  ++  V           +++DP ++I  
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNV---------ATDRLDPADYI--  76

Query  90   DKDDPRITKSGRFLRKSSLDELPQLLNIINGTMSIVGPRPEVPEIVDQYT-PEQRHRLDM  148
                   TK+G+F+RK+SLDELPQL+NI++G M++VGPR   P + +QY   E+R  +++
Sbjct  77   -------TKTGKFIRKTSLDELPQLFNILKGDMAVVGPR---PALYNQYELIEKRTNVNV  126

Query  149  P---PGVTGLAQVNGRSELTLTETLNYDVEYVQNWRFGLDLKILWKTL  193
                PG+TGLAQV GR + T  + ++YD  YV+N  F LD+ I+ KT+
Sbjct  127  HLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

410) EHR_08925 in NC_018081


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (369),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 66/158 (42%), Positives = 109/158 (69%), Gaps = 2/158 (1%)

Query  37   CVRFKLGSPVIFKQTRPGKNEQLFFMYKFRTMTDEKDQHGAY-LPDEVRLTKFGKLLRAT  95
             +++   +P++FKQ RPG +++LF +YKFR+M ++  + ++  L     +TK GK++R T
Sbjct  27   AIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKT  86

Query  96   SLDELPELWNIFKGEMSFVGPRPLL-VEYLTLYNEEQRKRHNIRPGLTGLAQVSGRNAIS  154
            SLDELP+L NI+KG+M+ VGPRP L  +Y  + +  + + H ++PGLTGLAQV GR+  +
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNT  146

Query  155  WEEKFTYDCLYVESYSFGKDVWILLQTVLKVFKQEGIS  192
             ++K  YD +YVE+ SF  D+ I+ +T+ + +  EG+S
Sbjct  147  DDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

411) ANA_C10813 in NC_019427


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 78/194 (41%), Positives = 122/194 (63%), Gaps = 19/194 (9%)

Query  53   KRLFDIVFSLSVLILFSPIYMILALLIAISSKGPIFYVQERVGKNYRSFNCIKFRTMVNN  112
            KR+FDI  SL  +I+F P+  ++++ I I SKGPI + Q+R G + + F+  KFR+M ++
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  113  ADEILVEMMATSPNLRAEFEDNFKLKTDPRITKIGHFLRITSLDEFPQFWNVLKGDMSVV  172
            + ++  + +       A++           ITK G F+R TSLDE+PQ+ N+LKGDM+VV
Sbjct  62   TPNVATDRLDP-----ADY-----------ITKTGKFIRKTSLDELPQLFNILKGDMAVV  105

Query  173  GPRPLVAE--ELIKYGDYINHVLTIRPGITGLWQVSGRNDIPYPRRVQIDLHYVNFRNFW  230
            GPRP + +  ELI     +N  L ++PG+TGL QV GR++    ++VQ D  YV+ ++F 
Sbjct  106  GPRPALYNQYELIEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFK  164

Query  231  LDLWIILKTVNVVI  244
            LD+ II KT++  I
Sbjct  165  LDMYIIYKTIKNTI  178

412) VFMJ11_0188 in NC_011184


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  102 bits (368),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 73/182 (41%), Positives = 125/182 (69%), Gaps = 4/182 (2%)

Query  1    MIRILDflaaffgllflWPVLLIVTIIGLFDTGSP-VFIQERVGRNKKPFNLIKFRTMSV  59
            M RI+D+++++++++++ P+L++V+I   +++ +P VF Q+R G ++K F++ KFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   ETKSVAS-HLANNASITKLGSFLRKTKIDELPQLINVLKGEMSLVGPRPNLFNQEELIKE  118
            +T +VA+ +L     ITK G F+RKT +DELPQL+N+LKG+M++VGPRP L+NQ ELI  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  RDALRVYDVLPGVTGLAQVQNIDMSTPELLAKTDRKMID--TLTVKSYFKYILMTATGSG  176
            R  + V  V PG+TGLAQV   D +T +   + D+  ++  ++ +  Y+ Y  +  T S+
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  177  SG  178
             G
Sbjct  181  EG  182

413) epsL in NC_016943


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  101 bits (367),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 61/152 (41%), Positives = 96/152 (64%), Gaps = 9/152 (5%)

Query  31   PVLFRQQRSGLHGAEFSILKLRTMRAEDYPGEPDPDRL------TTVGNVLRTTSLDELP  84
            P++F+Q+R+G+    F I K+R+MR +    +   DRL      T  G+ +R TSLDELP
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQD--TPNVATDRLDPADYITKTGKFIRKTSLDELP  92

Query  85   QLWNVLRGDMALIGPRPTLPEQVERYSDRQRGRLA-VRPGLTGWAQVLARNSISWPERIE  143
            QL N+L+GDMA++GPRP+L +Q E    R    +  V+PGLTG AQV++R++ +  ++++
Sbjct  93   QLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQ  152

Query  144  LDLWYVEHRSWSLDARILLLTAWRLLRPSGVT  175
             D  YVE++S  LD  I+  T    + + GV+
Sbjct  153  YDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

414) cps2E in NC_015697


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  101 bits (366),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 127/189 (68%), Gaps = 10/189 (5%)

Query  32   KRICDIFFGVIFGIIS-LPIILVFGILIKLTSKGPVFFKQERVGYMGKPITVVKLRSMRN  90
            KRI DIF + +++II  LP++++ +I IK+ SKGP+ FKQ+R G   K + + K+RSMR+
Sbjct  2    KRIFDIF-SSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  91   DAEKKTGAVWATKDDPR--VTSVGRFMRKTRVDELPQFWSIIKGDMSLVGPRPERFVLTE  148
            D    T  V + + DP   +T  G+F+RKT +DELPQ+ +I+KGDM++VGPRP  +    
Sbjct  61   D----TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN-QY  115

Query  149  EFSQKWLDFPKRLRIIPGLTGYAQVNGGYDLKPNEKCKLDNYYIEHYSLGFDFKIAFKTI  208
            E+ +K+ +   +L + PGLTG AQV G  +   ++K + D++Y+E+ S+ +D  I +KTI
Sbjct  116  ELIEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

Query  209  RIIFTGDGA  217
            +  ++++G 
Sbjct  175  KNTISSEGV  183

415) Theam_0675 in NC_014926


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  101 bits (367),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 80/199 (41%), Positives = 121/199 (61%), Gaps = 17/199 (8%)

Query  9    KRVFDVIFSSFVILLLSPIYLTIAVIIKFVDRGPVFFKHRRVGCEGKEFEVIKFRSMYPD  68
            KR+FD++ S + I+++ P+ + +++ IK+  +GP+ FK+ R G   K F + KFRSM  D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  69   AEERLKKLLEKDAKAREEWKKKFKLKNDPRITPIGKFLRKTSLDELPQFFNVLKGDMSVV  128
            +           ++   ++     L     IT  GKF+RKTSLDELPQ+FN+LKGDM+VV
Sbjct  62   T-----------PNVATDR-----LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVV  105

Query  129  GPRPVVKEELEKFYKDKAKYYLSVKPGITGYWQVEGRSDIEDYEKRVEMDVWYVKNQSLW  188
            GPRP + ++ E + K        VKPG+TG  QV GR +  D +++V+ D  YV NQS+ 
Sbjct  106  GPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD-DQKVQYDKFYVENQSFK  164

Query  189  LDIKIILKTIWVMLTGKGA  207
            LD+ II KTI   +++ G 
Sbjct  165  LDMYIIYKTIKNTISSEGV  183

416) BCB4264_A5394 in NC_011725


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  101 bits (365),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 72/155 (47%), Positives = 104/155 (68%), Gaps = 5/155 (3%)

Query  65   KGPIIYSQERLGVNGKRFRVLKFRSMVVDAEKGGPQWATKDDNRITKFGHFIRKTRIDEL  124
            KGPI++ Q+R GV+ K F++ KFRSM  D+ + + ++    D  ITK G FIRKT +DEL
Sbjct  33   KGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-ITKTGKFIRKTSLDEL  91

Query  125  PQLLNILRGDMGIIGPRPERPIFTE-KFSEEIPNFRDRLVIRPGLTGWAQVNGGYDITPR  183
            PQL+NIL+GDM+++GPRP  +++ +  + E   N   +LV +PGLTG AQV G  + T  
Sbjct  92   PQLFNILKGDMAVVGPRP--ALYNQYELIEKRTNVNVHLV-KPGLTGLAQVMGRDNNTDD  148

Query  184  EKFELDMYYIKNMSVLLDMKILVKTIKVVITGEGA  218
            +K + D +Y+ N S  LDM I+ KTIK  I++EG 
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

417) GC56T3_3306 in NC_014206


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  101 bits (365),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 68/159 (43%), Positives = 108/159 (68%), Gaps = 5/159 (3%)

Query  66   KLETPGPAFFLQERVGLYGKYFKVIKLRSMEVNAEKNGAQWAAKNDPRVTRVGAFIRKTR  125
            K+E+ GP  F Q+R G+  K FK+ K+RSM  ++ + ++++    D  +T+ G FIRKT 
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPAD-YITKTGKFIRKTS  87

Query  126  IDELPQLFNVLKGDMSLIGPRPERPMFTA-QFNEEIPGFIDRLQVKPGITGWAQVNGGYD  184
            +DELPQLFN+LKGDM+++GPRP  +++   ++ E       +L VKPG+TG AQV G  +
Sbjct  88   LDELPQLFNILKGDMAVVGPRP--ALYNQYELIEKRTNVNVHL-VKPGLTGLAQVMGRDN  144

Query  185  ITPREKLELDRYYIHNMSFWLDLKIILKTIKVCLTGDGA  223
             T  +K++ D++Y++N SF LD+ II KTIK  ++++G 
Sbjct  145  NTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

418) Ajs_3034 in NC_008782


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (364),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 64/151 (43%), Positives = 98/151 (65%), Gaps = 2/151 (1%)

Query  34   SPVFFTQVRPGMHGKPFKMVKFRSMTSER-GPDGELLPDAVRLAPFGRFLRATSLDELPE  92
            +P+ F Q RPG+  K FK+ KFRSM  +      + L  A  ++  G+F+R TSLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  93   LWNVLKGDMSLVGPRP-LLMEYLPLYSPEQARRHEVRPGITGWAQVNGRNAISWEDKFKL  151
            L N+LKGDM++VGPRP L  +Y  +    +   H V+PG+TG AQV GR+  + ++K + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  152  DVWYVDHRSLWLDIKILWLTVKKVLVREGIS  182
            D  YV+++S+ LD+ I+  T+K+ +  EG+S
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

419) Clocel_0896 in NC_014393


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (363),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 81/177 (46%), Positives = 123/177 (70%), Gaps = 5/177 (2%)

Query  33   MKRFLDIFLSLigcvigipiviitcivvvLESKGNPIYTQERLGKDGQAFKLYKIRSMCT  92
            MKR++DIF SL + +I +P++++  I + +ESKG  ++ Q+R G   + FK+YK+RSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  93   DAEKNGPKWADKNDSRVTRVGKFIRKTRIDEIPQLFNILKGDMSIVGPRPERSVFTFEFQ  152
            D+ + +  + D  D  +T+ GKFIRKT +DE+PQLFNILKGDM++VGPRP  +++  +++
Sbjct  61   DTPNVATDRLDPADY-ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYN-QYE  116

Query  153  -KEIPTFINRLQVKPGLTGLAQVNGGYDITPKEKLKHDLEYIENRNFSMDFKIILKT  208
              E  T +N   VKPGLTGLAQV G  + T  +K++ D  Y+EN++F +D  II KT
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

420) GNIT_2483 in NC_016041


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (363),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 64/140 (46%), Positives = 95/140 (68%), Gaps = 3/140 (2%)

Query  31   DTGSPIFKQERVGRDQKPFILIKFRTMKLNTISVAT-HLASTASITPLGSFLRRTKLDEL  89
              G+ +FKQ+R G  +K F + KFR+M+ +T +VAT +L ++  IT  G F+R+T LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  90   PQLWNVLIGEMSLVGPRPGLYNQEELTKARSARNVYAIRPGITGLAQVNSIDMSTPELLA  149
            PQL N+L G+M++VGPRP+LYNQ EL   R+  NV  ++PG+TGLAQV + D +T +   
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  KTDKDMIDN--FTIKNYFKY  167
            + DK  ++N  F +  Y+ Y
Sbjct  152  QYDKFYVENQSFKLDMYIIY  171

421) G157_03315 in NC_022347


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 66/156 (43%), Positives = 105/156 (68%), Gaps = 8/156 (5%)

Query  36   TQGSVIFTQNRPGLNEKIFKIYKFKTMSDERDEKGELLSDELRLKAF----GKIVRSLSL  91
            ++G+++F Q+RPG+++K+FKIYKF++M   R++  ++ +D L    +    GK++R  SL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYITKTGKFIRKTSL  88

Query  92   DELLQLFNVLKGDMSFVGPRPLLVEYLPLYNEEQKLR-HKVRPGITGWAQVNGRNAISWQ  150
            DEL QLFN+LKGDM+ VGPRP L +   L +   ++  H V+PG+TG AQV GR+  + +
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  151  KKFELDVYYVKNISFLLDLKIMFLTALKVLKRSGVS  186
            +K + D +YV N SF LD+ I++ T  + +   GVS
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

422) CHAB381_0952 in NC_009714


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 78/185 (43%), Positives = 122/185 (66%), Gaps = 4/185 (2%)

Query  6    LKRILDFLMALILIILTSPLMLITYFLIKKHISKNAIFTQLRPGLNEKIFKIYKFKTMND  65
            +KRI+D++ +L  II+  PL+++  + IK +     +F Q RPG+++K+FKIYKF++M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   ECDE--NGKLLPDELRLNDYGKKIRALSLDELLQLFNVLKGDMSFIGprpllpeylplyN  123
            +  +   ++L P +  +   GK IR  SLDEL QLFN+LKGDM+ +GPRP L +   L +
Sbjct  61   DTPNVATDRLDPADY-ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  124  DEQKLR-HSVRPGITGLAQVNGRNAISWRKKFEFDTFYAKNLSFLLDIKIAFLTVKKVIK  182
               ++  H V+PG+TGLAQV GR+  +  +K ++D FY  N SF LD+ I + T+K+ I 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTIS  179

Query  183  KEGVN  187
             EGV+
Sbjct  180  SEGVS  184

423) Caur_0948 in NC_010175


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 67/156 (43%), Positives = 104/156 (67%), Gaps = 9/156 (5%)

Query  38   GPGVFFRQQRPGLHGKPFTMLKFRTM-TDARDAQGNLLPDDQRLTPFGRFLRSTSLDELP  96
            GP VF +Q+RPG+  K F + KFR+M  D+ +   + L   + +T  G+F+R TSLDELP
Sbjct  34   GPIVF-KQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELP  92

Query  97   ELLCVLRGEMSLVGPRPLLMQYLERYTPEQRRR----HEVLPGITGLAQINGRNALSWEQ  152
            +L+ +L+G+M++VGPRP L  Y ++Y   ++R     H V PG+TGLAQ+ GR+  + +Q
Sbjct  93   QLFNILKGDMAVVGPRPAL--Y-NQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQ  149

Query  153  KFAYDVQYVDQLSFWLDVKILFLTLWKVIKREGISQ  188
            K  YD  YV++ SF LD+ I++ T+ + I  EG+S+
Sbjct  150  KVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

424) Chy400_1034 in NC_012032


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (364),  Expect = 4e-23, Method: Compositional matrix adjust.
 Identities = 67/156 (43%), Positives = 104/156 (67%), Gaps = 9/156 (5%)

Query  38   GPGVFFRQQRPGLHGKPFTMLKFRTM-TDARDAQGNLLPDDQRLTPFGRFLRSTSLDELP  96
            GP VF +Q+RPG+  K F + KFR+M  D+ +   + L   + +T  G+F+R TSLDELP
Sbjct  34   GPIVF-KQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELP  92

Query  97   ELLCVLRGEMSLVGPRPLLMQYLERYTPEQRRR----HEVLPGITGLAQINGRNALSWEQ  152
            +L+ +L+G+M++VGPRP L  Y ++Y   ++R     H V PG+TGLAQ+ GR+  + +Q
Sbjct  93   QLFNILKGDMAVVGPRPAL--Y-NQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQ  149

Query  153  KFAYDVQYVDQLSFWLDVKILFLTLWKVIKREGISQ  188
            K  YD  YV++ SF LD+ I++ T+ + I  EG+S+
Sbjct  150  KVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

425) epsL in NC_020134


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 75/162 (47%), Positives = 111/162 (69%), Gaps = 2/162 (1%)

Query  8    KRIMDIVMSLIAIIILSPvllliaalvkiklGSPVIFKQKRPGLNEKIFTLYKFRTM-TD  66
            KRI DI  SL AIII+ P+L+L++  +KI   +P++FKQ RPG+++K+F +YKFR+M  D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   ARDENGMLLPDNVRLTRFGRMLRSTSLDELPELFNILKGDMSFVGPRPQLVKDLVFMTPQ  126
            + +     L     +T+ G+ +R TSLDELP+LFNILKGDM+ VGPRP L ++  ++  +
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  127  QR-KRHSVLPGLTGWAQINGRNGITWEEKLELDLEYIKNISF  167
               + H V PGLTG AQ+ GR+  T ++K++ D  Y+ N SF
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSF  163

426) BMQ_1117 in NC_014019


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 72/162 (45%), Positives = 102/162 (63%), Gaps = 25/162 (15%)

Query  64   DPKGPIFFSQERIGKKGKNFKMYKFRSMVTDAETKLTELLQLNETTGAMFKMKNDPRVTR  123
            ++KGPI F Q+R G K K FK+YKFRSM  D+    T+ L+  +             +T+
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY------------ITK  78

Query  124  IGRLIRKTSIDELPQLFNVLKGEMSLVGPRPPLPREVAEYTNYD--KKRL-----IVTPG  176
             G++IRKTS+DELPQLFN+LKG+M++VGPRP+L      Y +Y+   KR      +V PG
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL------YNQYELIEKRTNVNVHLVKPG  132

Query  177  CTGIWQVSGRSNIGFKEMVELDLYYIKNQSISMDVKIIFKTI  218
             TG+ QV GR N    + V+ D +Y+ NQS+ +D+ II+KTI
Sbjct  133  LTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

427) yvfC in NC_012491


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 68/152 (45%), Positives = 101/152 (67%), Gaps = 2/152 (1%)

Query  34   SPVLFVQERPGLHGKSFFIYKFRTMTNERDESGV-LLSDEQRLGSFGTLLRKYSLDELPQ  92
            +P++F Q+RPG+  K F IYKFR+M ++  + +   L   + +   G ++RK SLDELPQ
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  93   LWNVLRGEMSLVGPRP-LLMEYLPLYTPRQLKRHDVKPGITGWAQVNGRNAIDWEQKFEL  151
            L N+L+G+M++VGPRP L  +Y  +    +++ H VKPG+TG AQV GR+    +QK + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  152  DVWYVENSSFFLDMRIIGLTIKHVFQSTGINQ  183
            D  YVEN SF LDM II  TIK+ + S G+++
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

428) K210_09265 in NC_021354


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 105/160 (66%), Gaps = 10/160 (6%)

Query  20   DSKGPAFYTQQRVGQAGKEFKIYKLRSMRVDAEVNTGAVWAEKNDPR--ITKVGRFIRKV  77
            +SKGP  + Q+R G   K FKIYK+RSMR D    T  V +++ DP   ITK G+FIRK 
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD----TPNVATDRLDPADYITKTGKFIRKT  86

Query  78   RIDELPQFLNVLIGEMSIIGPRPERKDLTDQFE-SEIPGFKERLLVKPGITGWAQVNGGY  136
             +DELPQ++N+L G+M+++GPRP    L +Q+E  E     +  LVKPG+TG AQV G  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPA---LYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRD  143

Query  137  DITPAEKLVFDREYLNAFSFKQDIVIIFKTIRVVLTGSGA  176
            + T  +K+ +D+ Y++  SFK D+ II+KTI+  +++ G 
Sbjct  144  NNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

429) BN865_10040 in NC_022132


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (362),  Expect = 5e-23, Method: Compositional matrix adjust.
 Identities = 66/155 (43%), Positives = 104/155 (68%), Gaps = 8/155 (5%)

Query  37   QGSVIFTQNRPGLNEKIFKIYKFKTMSDERDEKGELLSDELRLKAF----GKIVRSLSLD  92
            +G+++F Q+RPG+++K+FKIYKF++M   R++  ++ +D L    +    GK++R  SLD
Sbjct  33   KGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYITKTGKFIRKTSLD  89

Query  93   ELLQLFNVLKGDMSFVGPRPLLVEYLPLYNEEQKLR-HKVRPGITGWAQVNGRNAISWQK  151
            EL QLFN+LKGDM+ VGPRP L +   L +   ++  H V+PG+TG AQV GR+  + ++
Sbjct  90   ELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQ  149

Query  152  KFELDVYYVKNISFLLDLKIMFLTALKVLKRSGVS  186
            K + D +YV N SF LD+ I++ T  + +   GVS
Sbjct  150  KVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

430) ERH_0406 in NC_015601


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =  100 bits (361),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 105/160 (66%), Gaps = 10/160 (6%)

Query  60   DSKGPAFYTQQRVGQAGKEFKIYKLRSMRVDAEVNTGAVWAEKNDPR--ITKVGRFIRKV  117
            +SKGP  + Q+R G   K FKIYK+RSMR D    T  V +++ DP   ITK G+FIRK 
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD----TPNVATDRLDPADYITKTGKFIRKT  86

Query  118  RIDELPQFLNVLIGEMSIIGPRPERKDLTDQFE-SEIPGFKERLLVKPGITGWAQVNGGY  176
             +DELPQ++N+L G+M+++GPRP    L +Q+E  E     +  LVKPG+TG AQV G  
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPA---LYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRD  143

Query  177  DITPAEKLVFDREYLNAFSFKQDIVIIFKTIRVVLTGSGA  216
            + T  +K+ +D+ Y++  SFK D+ II+KTI+  +++ G 
Sbjct  144  NNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

431) WcaJ in NC_009454


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.6 bits (359),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 77/177 (44%), Positives = 126/177 (72%), Gaps = 7/177 (3%)

Query  10   IKRIFDLACTlvllvilspllllvalAIKVTSPGEVIFKQQRLGLNREVFLMYKFRSMIP  69
            +KRIFD+  +L  ++I+ PLL+LV++AIK+ S G ++FKQ+R G++  +F +YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  70   NAQNIGPGMFVEKDDPR--ITPVGKILRKTGIDELAQLFNVIRGEMSLVGPRPAPLHHFG  127
            ++ N++     ++ DP   IT  GK++RKT++DEL+QLFN+++G+M++VGPRPA  +++ 
Sbjct  61   DTPNVAT----DRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYE  116

Query  128  KYDER-QLKRFNVRPGITGWAQVNGRVALYWPERIELDLWYVENYSFWLDLKILLKT  183
              + R +++   V+PG+TG AQV GR      ++++ D  YVEN SF LD+ I+ KT
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

432) Ccan_23390 in NC_015846


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 66/141 (47%), Positives = 99/141 (71%), Gaps = 5/141 (3%)

Query  31   DTGSPIFAQERVGKNMKPFKLYKFRTMHKNTASVAS-HLASKSSITKFGGFLRKTKLDEL  89
              G+ +F Q+R G + K FK+YKFR+M+++T++VA+ +L +   ITK G F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  90   PQLFNVLLGDMSLVGARPNLFNQVELIEERNKRGVYNYLPGITGLAQINDVDMSTPKKLA  149
            PQLFN+L GDM++VG+RP L+NQ ELIE R +  V    PG+TGLAQ+ + D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  ELDAKMY---QNLNIEHYFKY  167
            + D K Y   Q+++++ Y+ Y
Sbjct  152  QYD-KFYVENQSFKLDMYIIY  171

433) Mfla_1277 in NC_007947


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 65/146 (45%), Positives = 104/146 (72%), Gaps = 2/146 (1%)

Query  1    MIRFFDIIFSVIGLVLGFPLL-LSIYTLGLFDTGAPLFRQVRVGRYRQPFTLVKFRTMKV  59
            M R+FDI+ S+ ++++ +PLL L   ++ +   G+ +F+Q R G   + F + KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DTASVASH-LASTNSITRLGRFLRRTKLDELPQLWNVLKGEMSLVGPRPNLFNQEELMAE  118
            DT++VA++ L +++ IT+ G+F+R+T LDELPQL N+LKG+M++VGPRP L+NQ EL+  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  RELRGVYHARPGITGLAQVNDIDMST  144
            R    V   +PG+TGLAQV + D +T
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNT  146

434) tuaA in NC_006270


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 78/187 (42%), Positives = 125/187 (67%), Gaps = 5/187 (2%)

Query  33   MKRIMDIVLSLIGLALTlpfillfciliciETPGSPLYRQERVGKDGKHFKVIKLRSMRI  92
            MKRI DI  SL ++ + LP+++L  I I IE+ G+ +++Q+R G   K FK+ K+RSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  93   DAEKSGAKWAQKDDPRITAVGSFIRRTRIDELPQLINVLAGDMSIVGPRPERPMFTA-QF  151
            D+ + ++ + +  D  IT  G FIR+T +DELPQL+N+L GDM++VGPRP  +++   ++
Sbjct  61   DTPNVATDRLDPAD-YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYNQYEL  117

Query  152  HHEIPGFKNRLIVKPGLTGLAQVNGGYDISPREKLVHDLYYIRNLTFLLDLKVMLKTIKV  211
             +     + +L VKPGLTGLAQV G  + +  +K+  D +Y+ N +F LD+ ++ KTIK 
Sbjct  118  IEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  212  VLTGEGA  218
             +++EG 
Sbjct  177  TISSEGV  183

435) tuaA in NC_006322


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 78/187 (42%), Positives = 125/187 (67%), Gaps = 5/187 (2%)

Query  33   MKRIMDIVLSLIGLALTlpfillfciliciETPGSPLYRQERVGKDGKHFKVIKLRSMRI  92
            MKRI DI  SL ++ + LP+++L  I I IE+ G+ +++Q+R G   K FK+ K+RSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  93   DAEKSGAKWAQKDDPRITAVGSFIRRTRIDELPQLINVLAGDMSIVGPRPERPMFTA-QF  151
            D+ + ++ + +  D  IT  G FIR+T +DELPQL+N+L GDM++VGPRP  +++   ++
Sbjct  61   DTPNVATDRLDPAD-YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYNQYEL  117

Query  152  HHEIPGFKNRLIVKPGLTGLAQVNGGYDISPREKLVHDLYYIRNLTFLLDLKVMLKTIKV  211
             +     + +L VKPGLTGLAQV G  + +  +K+  D +Y+ N +F LD+ ++ KTIK 
Sbjct  118  IEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  212  VLTGEGA  218
             +++EG 
Sbjct  177  TISSEGV  183

436) Krodi_2762 in NC_015496


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/185 (42%), Positives = 126/185 (69%), Gaps = 2/185 (1%)

Query  7    LKPLIDISCAFIGLIVIAPiillitflltiANGGKPFYTQLRTGKDDIIFRIIKFRSM-N  65
            +K ++DI  ++ ++I++ P+++L+++ + I + G   + Q R G  + +F+I KFRSM +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DKRDRFGNLLPDAVRLTPVGKFIRKTSLDELPQLLNVLKGDMSFIGPRP-LLPEYVELYS  124
            D  +   + L  A  +T  GKFIRKTSLDELPQL+N+LKGDM+ +GPRP L  +Y  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  125  QEQRKRGLVKPGISGWAQVNGRNAISWERKFELDVWYVNNQSFLFDIKILLMTIKKVFIS  184
            + + +  LVKPG++G AQV GR+  + ++K + D  YV+NQSF +D+ I+  TIK+ + S
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  185  EGISQ  189
            EG+S+
Sbjct  181  EGVSH  185

437) Calkr_2285 in NC_014721


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 71/174 (41%), Positives = 110/174 (64%), Gaps = 22/174 (12%)

Query  29   CGILIKLEDGGPVFYCGKRLGKDGKVFKMYKLRTMKVNAPDIRNP--DGSTYNAEDDPRL  86
             +I IK+E  GP+ +   R G   K+FK+YK+R+M+ ++P++     D + Y       +
Sbjct  24   VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-------I  76

Query  87   TKIGKFLRKTSLDELPQFFNVIKGEMSIIGPRPDLPEHINYYTSYEI--KKLSVL-----  139
            TK GKF+RKTSLDELPQ+FN++KG+M+++GPRP L      Y  YE+  K+ +V      
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL------YNQYELIEKRTNVNVHLVK  130

Query  140  PGITGYNQAYYRNSVEWKKRLQNDIYYVENISFLLDLKILFKTIIKVLKREGVN  193
            PG+TG  Q   R++    +++Q D +YVEN SF LD+ I++KTI + +  EGV+
Sbjct  131  PGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

438) LRI_0878 in NC_021494


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.4 bits (358),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 125/189 (67%), Gaps = 10/189 (5%)

Query  32   KRICDILFGVLFGIIS-LPIILVFGILIKLTSKGPVFFKQERVGYMGKPITVVKLRSMRN  90
            KRI DI F+ L++II  LP++++ +I IK+ SKGP+ FKQ+R G   K + + K+RSMR+
Sbjct  2    KRIFDI-FSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  91   DAEKKTGAVWAKKDDPR--VTSVGRFMRKTRVDELPQFWSIIKGDMSLVGPRPERFVLTE  148
            D    T  V + + DP   +T  G+F+RKT +DELPQ+ +I+KGDM++VGPRP  +    
Sbjct  61   D----TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN-QY  115

Query  149  EFSQKWPDFPQRLRIIPGLTGYAQVNGGYDLKPNEKCKLDNYYINHYSLGLDFEIALETF  208
            E+ +K+ +   +L + PGLTG AQV G  +   ++K + D++Y+++ S+ LD  I   T+
Sbjct  116  ELIEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

Query  209  KIIFTGDGA  217
            K  ++++G 
Sbjct  175  KNTISSEGV  183

439) EFD32_1897 in NC_018221


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.1 bits (357),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 70/157 (45%), Positives = 102/157 (65%), Gaps = 2/157 (1%)

Query  38   VKTKLGSPVIFKQERPGKNEKIFSMYKFRTM-ADERDQNGNYLPDDVRLTKFGKMLRATS  96
            +K    +P++FKQ+RPG ++K+F +YKFR+M  D  +   + L     +TK GK +R TS
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTS  87

Query  97   LDELPELWNILKGDMSIVGPRPLLVEYLPLYNEKQK-KRHNVRPGLTGLAQVNGRNAISW  155
            LDELP+L NILKGDM++VGPRP L +   L + + + + H V+PGLTGLAQV GR+  + 
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  156  EEKFDLDLQYVKKISFFGDIAIIVKTCAKVIMKENID  192
            ++K + D  YV + SF  D+ II KT  + I  E + 
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

440) Sulku_2410 in NC_014762


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.1 bits (357),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 64/151 (43%), Positives = 98/151 (65%), Gaps = 2/151 (1%)

Query  40   PLFFTQKRPGYKGKIFTIYKFRTMSDE-RDENGELLSDEQRLKGVGKIIRSLSIDELPQL  98
            P+ F Q RPG K K+F IYKFR+M ++  +   + L   + +   GK+IR  S+DELPQL
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  99   FNVLKGEMSFIGPRPLL-VEYLPLYNAEQQKRHDVLPGITGWAQVNGRNAIGWEDKFRFD  157
            FN+LKG+M+ +GPRP L  +Y  + +  + + H V PG+TG AQV GR+    ++K ++D
Sbjct  95   FNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYD  154

Query  158  TEYVRNISFWMDFKILFLTVKKVLIKEGISQ  188
              YV N SF +D  I++ T+K+ +  EG+S+
Sbjct  155  KFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

441) tuaA in NC_017196


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 99.1 bits (357),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 78/187 (42%), Positives = 125/187 (67%), Gaps = 5/187 (2%)

Query  25   MKRVMDIVLSLIGLALTlpfillfciliciETPGSPLYRQERVGKDGKHFKVIKLRSMRI  84
            MKR+ DI  SL ++ + LP+++L  I I IE+ G+ +++Q+R G   K FK+ K+RSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  85   DAEKSGAKWAQKDDPRITAVGSFIRRTRIDELPQLINVLAGDMSLVGPRPERPMFTA-QF  143
            D+ + ++ + +  D  IT  G FIR+T +DELPQL+N+L GDM++VGPRP  +++   ++
Sbjct  61   DTPNVATDRLDPAD-YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYNQYEL  117

Query  144  HNEIPGFKNRLIVKPGLTGLAQVNGGYDISPREKLVHDLYYIRNLTFLLDLKVILKTIKV  203
             +     + +L VKPGLTGLAQV G  + +  +K+  D +Y+ N +F LD+ +I KTIK 
Sbjct  118  IEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  204  VLTGEGA  210
             +++EG 
Sbjct  177  TISSEGV  183

442) wbfU in NC_004347


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =   99 bits (360),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 68/151 (46%), Positives = 98/151 (65%), Gaps = 3/151 (1%)

Query  32   DTGSPIFIQTRVGKHKKPFNLVKFRTMSKDTASVAS-HLASNAAITKFGGFLRKTKIDEL  90
              G+ +F Q R G  +K F++ KFR+M +DT++VA+ +L +   ITK G F+RKT +DEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPNLFNQEELIAERDALGVYNVLPGVTGLAQVQNIDMSTPKLLA  150
            PQL+N+LKG+M++VGPRP L+NQ ELI  R  + V  V PG+TGLAQV   D +T     
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  QTDKQMID--TLTLRSYFKYILMTATGSGSG  179
            Q DK  ++  ++ L  Y+ Y  +  T S+ G
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

443) B565_2776 in NC_015424


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =   99 bits (360),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 67/151 (45%), Positives = 98/151 (65%), Gaps = 3/151 (1%)

Query  31   DTGSPIFVQERVGRYKKPFKLIKFRTMSVDTQSVAS-HLASTSSITKLGAFLRKTKIDEL  89
              G+ +F Q+R G  +K FK+ KFR+M  DT +VA+ +L ++  ITK G F+RKT +DEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  90   PQLINVLKGEMSLVGPRPNLFNQEELIKERDALGVYEVLPGITGLAQVQNIDMSTPALLA  149
            PQL+N+LKG+M++VGPRP L+NQ ELI  R  + V  V PG+TGLAQV   D +T     
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  KIDRQMID--TLTLTSYFRYIIMTATGSGAG  178
            + D+  ++  ++ L  Y+ Y  +  T S+ G
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

444) Nther_2523 in NC_010718


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =   99 bits (360),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 71/161 (45%), Positives = 108/161 (68%), Gaps = 8/161 (4%)

Query  51   VRLKIGTPVFFKQQRPGLNERIFTLYKFRTMTNEKDE--KGKLLPDDVRLTKLGKFLRKT  108
            +++    P+ FKQ+RPG+++++F +YKFR+M ++  +   ++L P D  +TK GKF+RKT
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-ITKTGKFIRKT  86

Query  109  SLDELPELFNVIKGDMSLVGPRPLLTSYLPYYTEEERKR---HQVRPGITGLAQVSGRNY  165
            SLDELP+LFN++KGDM++VGPRP L  Y  Y   E R     H V+PG+TGLAQV GR+ 
Sbjct  87   SLDELPQLFNILKGDMAVVGPRPAL--YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDN  144

Query  166  LDWEERLSKDVEYVYNITFFGDMKIILKTIYRVLKRDNIAD  206
               ++++  D  YV N +F  DM II KTI   +  + +++
Sbjct  145  NTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

445) MC28_4509 in NC_018693


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =   99 bits (360),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 77/191 (41%), Positives = 128/191 (68%), Gaps = 19/191 (9%)

Query  18   LKRTLDILGAIVGLIVFSpffiiipiLYMRGDAKGPVFFKQSRIGKDGKLFGIYKFRSMV  77
            +KR +DI++++ ++I+F   ++++  + ++ ++KGP+ FKQ R G   KLF IYKFRSM 
Sbjct  1    MKRIFDIFSSLYAIIIF-LPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  78   VNAEEKLEKNEVLYKKYIDNNYKLEPEEDPRITNIGRFLRRTSLDELPQFINVLKGDMSL  137
             ++ +            +  + +L+P +   IT+ G+F+R+TSLDELPQ++N+LKGDM++
Sbjct  60   QDTPN------------VATD-RLDPADY--ITKTGKFIRKTSLDELPQLFNILKGDMAV  104

Query  138  VGPRPVI--QEELKEYGSKTSDFLSVSPGLTGYWQVSGRSDVGYPERVDIELYYVYNQSL  195
            VGPRP +  Q EL E  ++ +  L V PGLTG  QV GR +    ++V+ + +YV NQS+
Sbjct  105  VGPRPALYNQYELIEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSF  163

Query  196  KLDIIILFKTV  206
            KLD+ I++KT+
Sbjct  164  KLDMYIIYKTI  174

446) Emtol_2069 in NC_018748


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score =   99 bits (360),  Expect = 8e-23, Method: Compositional matrix adjust.
 Identities = 69/151 (46%), Positives = 102/151 (68%), Gaps = 14/151 (9%)

Query  43   QKRVGLNEKVFTIWKFKTM-NDKRDESGELLSDEKRLTPVGRFIRKSSLDEIPQLFNVLK  101
            Q R G+++K+F I KF++M +D  + + + L     +T  G+FIRK+SLDE+PQLFN+LK
Sbjct  40   QDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILK  99

Query  102  GEMSLIGPRPLLVEYLPLYDNFQ--KKR-----HNVKPGITGWAQVNGRNTLTWQQKFQL  154
            G+M+++GPRP      +LY++++   KR     H VKPG+TG AQV GR+  T +QK Q 
Sbjct  100  GDMAVVGPRP------ALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  155  DVWYVENISLLLDVKILLYTIIKVVKSEGIS  185
            D  YVEN S+ LD+ I+  TI + + SEG+S
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

447) Cspa_c53480 in NC_020291


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.9 bits (356),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 68/162 (42%), Positives = 110/162 (68%), Gaps = 3/162 (1%)

Query  8    VKRIFDLICSTLGLIVLSPVLLVIAIRIKTGSDGPVFFKQIRVGERSKEFEILKFRTMVV  67
            +KRIFD++ S  ++I++ P+L++++I IK  S GP+ FKQ R G ++K F I KFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  68   DAEKLGRQITVGNDSRITKIGAFLRKYKLDELPQLINVFKGDMSLVGPRPEV-PRYVKLY  126
            D+ +++ +  ++    ITK G F+RK  LDELPQL+N++KGDM++VGPRP +  +Y  + 
Sbjct  61   DTPNVATD-RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  127  NEEQIRVLEVKPGITDLASIRYRDENDLLGEVENPDEFYINT  168
            +  ++ V  VKPG+T+LA +  RD+N     V+  D FY++ 
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY-DKFYVEN  160

448) CL3_01630 in NC_021024


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.6 bits (355),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 71/167 (43%), Positives = 109/167 (66%), Gaps = 15/167 (8%)

Query  18   LFVVP-AIKLESPGPAVFKQTRIGKNGRKFSIYKFRSMYMDAEERKKELMKQNEMDGLMF  76
            LF+V+ AIK+ES GP VFKQ R G + + F IYKFRSM  D+ +   + +   +      
Sbjct  21   LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-----  75

Query  77   KMKDDPRITKVGKFIRKTSIDELPQFFNVLRGDMSLVGTRPPTVDEFERYEEHHKRRLSL  136
                   ITK GKFIRKTS+DELPQ+FN+L+GDM++VG RP+  +++E  E + +  + L
Sbjct  76   -------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHL  128

Query  137  -RPGITGMWQVSGRSDIQNFEDVVRLDLEYIDNWSVWLDIKILFQTV  182
             +PG+TG+ QV GR +  + ++ V+ D  Y++N S  LD+ I+++T+
Sbjct  129  VKPGLTGLAQVMGRDNNTD-DQKVQYDKFYVENQSFKLDMYIIYKTI  174

449) N175_02220 in NC_022223


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 68/154 (45%), Positives = 101/154 (66%), Gaps = 5/154 (3%)

Query  43   DTGSPVFMQTRVGRHKKPFTLIKFRTMPVDTQSVAT-HLVGASSVTKLGSILRKTKLDEL  101
              G+ VF Q R G  +K F + KFR+M  DT +VAT +L  A  +TK G ++RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  102  PQLINVVKGEMSLVGPRPCLFNQQELIQIRDEKEVFDVRPGITGLAQVNEIDMSTPELLA  161
            PQL+N++KG+M++VGPRP L+NQ ELI+ R + +V  V+PG+TGLAQV   D +T +   
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  162  DWDLKMIQNMS--LTLY--FTCIIQTVLGKGAGD  191
            + D   ++N S  L +Y  +  I +T+ + G ++
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

450) VAA_02506 in NC_015633


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 68/154 (45%), Positives = 101/154 (66%), Gaps = 5/154 (3%)

Query  43   DTGSPVFMQTRVGRHKKPFTLIKFRTMPVDTQSVAT-HLVGASSVTKLGSILRKTKLDEL  101
              G+ VF Q R G  +K F + KFR+M  DT +VAT +L  A  +TK G ++RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  102  PQLINVVKGEMSLVGPRPCLFNQQELIQIRDEKEVFDVRPGITGLAQVNEIDMSTPELLA  161
            PQL+N++KG+M++VGPRP L+NQ ELI+ R + +V  V+PG+TGLAQV   D +T +   
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  162  DWDLKMIQNMS--LTLY--FTCIIQTVLGKGAGD  191
            + D   ++N S  L +Y  +  I +T+ + G ++
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

451) O3Y_01225 in NC_016944


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 62/140 (45%), Positives = 97/140 (70%), Gaps = 3/140 (2%)

Query  32   DTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVAT-HLVGASSVTRLGQFLRKTKLDEL  90
              G+ +F Q+R G +++ F + KFR+M ++T++VAT +L  A  +T+ G+F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPCLFNQQDLIAERESRGVFTVLPGITGLAQVNEVDMSTPVKLA  150
            PQL+N+LKG+M++VGPRP L+NQ +LI  R +  V  V PG+TGLAQV   D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  ELDQQMI--QTLNLKNYFTY  168
            + D+  +  Q+++L  Y+ Y
Sbjct  152  QYDKFYVENQSFKLDMYIIY  171

452) VCM66_0248 in NC_012578


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 62/140 (45%), Positives = 97/140 (70%), Gaps = 3/140 (2%)

Query  32   DTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVAT-HLVGASSVTRLGQFLRKTKLDEL  90
              G+ +F Q+R G +++ F + KFR+M ++T++VAT +L  A  +T+ G+F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPCLFNQQDLIAERESRGVFTVLPGITGLAQVNEVDMSTPVKLA  150
            PQL+N+LKG+M++VGPRP L+NQ +LI  R +  V  V PG+TGLAQV   D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  ELDQQMI--QTLNLKNYFTY  168
            + D+  +  Q+++L  Y+ Y
Sbjct  152  QYDKFYVENQSFKLDMYIIY  171

453) VCD_001359 in NC_012668


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 62/140 (45%), Positives = 97/140 (70%), Gaps = 3/140 (2%)

Query  32   DTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVAT-HLVGASSVTRLGQFLRKTKLDEL  90
              G+ +F Q+R G +++ F + KFR+M ++T++VAT +L  A  +T+ G+F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPCLFNQQDLIAERESRGVFTVLPGITGLAQVNEVDMSTPVKLA  150
            PQL+N+LKG+M++VGPRP L+NQ +LI  R +  V  V PG+TGLAQV   D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  ELDQQMI--QTLNLKNYFTY  168
            + D+  +  Q+++L  Y+ Y
Sbjct  152  QYDKFYVENQSFKLDMYIIY  171

454) Vch1786_I2545 in NC_016445


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 62/140 (45%), Positives = 97/140 (70%), Gaps = 3/140 (2%)

Query  32   DTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVAT-HLVGASSVTRLGQFLRKTKLDEL  90
              G+ +F Q+R G +++ F + KFR+M ++T++VAT +L  A  +T+ G+F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPCLFNQQDLIAERESRGVFTVLPGITGLAQVNEVDMSTPVKLA  150
            PQL+N+LKG+M++VGPRP L+NQ +LI  R +  V  V PG+TGLAQV   D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  ELDQQMI--QTLNLKNYFTY  168
            + D+  +  Q+++L  Y+ Y
Sbjct  152  QYDKFYVENQSFKLDMYIIY  171

455) VC0263 in NC_002505


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 62/140 (45%), Positives = 97/140 (70%), Gaps = 3/140 (2%)

Query  32   DTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVAT-HLVGASSVTRLGQFLRKTKLDEL  90
              G+ +F Q+R G +++ F + KFR+M ++T++VAT +L  A  +T+ G+F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPCLFNQQDLIAERESRGVFTVLPGITGLAQVNEVDMSTPVKLA  150
            PQL+N+LKG+M++VGPRP L+NQ +LI  R +  V  V PG+TGLAQV   D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  ELDQQMI--QTLNLKNYFTY  168
            + D+  +  Q+++L  Y+ Y
Sbjct  152  QYDKFYVENQSFKLDMYIIY  171

456) Vapar_1934 in NC_012791


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.3 bits (354),  Expect = 2e-22, Method: Compositional matrix adjust.
 Identities = 62/150 (42%), Positives = 96/150 (64%), Gaps = 2/150 (1%)

Query  35   PAFFWQVRPGREGRSFELIKFRSM-TNARDANGQLLPDAERLTPFGRFLRSSSLDELPEL  93
            P  F Q RPG   + F + KFRSM  ++ +   + L  A+ +T  G+F+R +SLDELP+L
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  94   WNVLKGDMSLVGPRP-LLMEYLPLYSAEQARRHEVRPGITGWAQVNGRNALSWEEKFKLD  152
             N+LKGDM++VGPRP L  +Y  +    +   H V+PG+TG AQV GR+  + ++K + D
Sbjct  95   FNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYD  154

Query  153  VWYVDNRSMWLDIKILWITVRKVLMREGIS  182
              YV+N+S  LD+ I+  T+++ +  EG+S
Sbjct  155  KFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

457) epsL in NC_017061


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 60/140 (43%), Positives = 95/140 (68%), Gaps = 8/140 (5%)

Query  3    AVRCAIGSPVLFKQTRPGHNGRPFTLYKLRTMTDARDENGVLLPDHLR----LTKTGRLI  58
            A++    +P++FKQ RPG + + F +YK+R+M   R++   +  D+L     +TKTG++I
Sbjct  27   AIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYITKTGKFI  83

Query  59   RKLSIDELPQLFNVLKGDISLVGPRP-LLMDYLPLYTAEQARRHEVKPGITGWAQINGRN  117
            RK S+DELPQLFN+LKGD+++VGPRP L  +Y  +    +   H VKPG+TG AQ+ GR+
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRD  143

Query  118  AISWEEKFKLDVWYVDNRTF  137
              + ++K + D  YV+N++F
Sbjct  144  NNTDDQKVQYDKFYVENQSF  163

458) tuaA in NC_021362


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 98.1 bits (353),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 78/187 (42%), Positives = 124/187 (67%), Gaps = 5/187 (2%)

Query  33   MKRIMDIVLSLIGLALTlpfillfciliciETPGSPLYRQERVGKDGKHFKVIKLRSMRI  92
            MKRI DI  SL ++ + LP+++L  I I IE+ G+ +++Q+R G   K FK+ K+RSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  93   DAEKSGAKWAQKDDPRITAVGSFIRRTRIDELPQLINVLAGDMSLVGPRPERPMFTA-QF  151
            D+ + ++ + +  D  IT  G FIR+T +DELPQL+N+L GDM++VGPRP  +++   ++
Sbjct  61   DTPNVATDRLDPAD-YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYNQYEL  117

Query  152  HHEIPGFKNRLIVKPGLTGLAQVNGGYDIGPREKLVHDLYYIRNLTFLLDLKVMLKTIKV  211
             +     + +L VKPGLTGLAQV G  +    +K+  D +Y+ N +F LD+ ++ KTIK 
Sbjct  118  IEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  212  VLTGEGA  218
             +++EG 
Sbjct  177  TISSEGV  183

459) NE0501 in NC_004757


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.8 bits (352),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 66/146 (46%), Positives = 102/146 (70%), Gaps = 2/146 (1%)

Query  17   MLRLLDIVLVIPGILVTLPLMVVLYVIGLFDTGSPL-FRQIRVGRRQQPFTLVKFRTMRP  75
            M R++DI   + +I++ LPL+ ++ +   +++ +P+ F+Q R G +++ F + KFR+MR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  76   GTASVATH-LADASAVTPFGGFLRQTKLDELPQLWNVLKGEMSLVGPRPCLPNQHELIRE  134
            +T++VAT+ L  A  +T  G F+R+T LDELPQL N+LKG+M++VGPRP L NQ ELI  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  135  RQLRGVFDVRPGITGLAQIQGIDMST  160
            R    V  V+PG+TGLAQ+ G D +T
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNT  146

460) BCG9842_B5557 in NC_011772


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.8 bits (352),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 77/192 (41%), Positives = 121/192 (64%), Gaps = 26/192 (13%)

Query  34   KRCMDFMGALCGLIILSPVFLMVAILIKYEDPKGPVFFKQIRMGKNGRNFYMYKFRSMVT  93
            KR  D+ ++L ++II+ P++++V+I IK  ++KGP+ FKQ R G + + F +YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIK-IESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  94   DAEKRLEDLLIQNEVSGAMFKMKDDPRVTKIGKFIRRTSIDELPQLINVLKGEMSLVGPR  153
            D+ +   D L   +             +TK GKFIR+TS+DELPQL+N+LKG+M++VGPR
Sbjct  61   DTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  154  PPLPREVQEYTNYD----RQRL---MVKPGCTGIWQISGRSSLSFAEMVELDIEYIINRN  206
            P+L      Y +Y+    R  +   +VKPG TG+ Q+ GR + +  + V+ D  Y+ N++
Sbjct  109  PAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQS  162

Query  207  LILDFKIIIKTV  218
            + LD  II KT+
Sbjct  163  FKLDMYIIYKTI  174

461) DSY3342 in NC_007907


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.8 bits (352),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 71/177 (41%), Positives = 109/177 (62%), Gaps = 25/177 (14%)

Query  21   PLWLFIVIWIKVDSPGPAIFRQQRIGLRGEPFTIYKFRTMVPDADRVMKAKIEQLKKEGK  80
            PL +++ I IK++S GP +F+Q+R G++   F IYKFR+M  D+  V   +++       
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD-------  71

Query  81   FNADEFVFQEKDDPRITGSGRFLRKTSLDELPQLLNIVNGTMSLVGPRPEVPEIVEQYT-  139
              + ++         IT +G+F+RKTSLDELPQL+NI++G M++VGPR   P + +QY  
Sbjct  72   --PADY---------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR---PALYNQYEL  117

Query  140  PEQRQRLNMP---PGVTGLAQINGRSALTLTETLKYDVQYVKNWSPGADIKILWKTI  193
             E+R  +N+    PG+TGLAQ+ GR   T  + ++YD  YV N S   D+ I+ KTI
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

462) H681_23270 in NC_020829


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 68/146 (47%), Positives = 103/146 (71%), Gaps = 2/146 (1%)

Query  1    MIRFFDFVFSLLGLIVGSPILLVIYVLGLLDTGSP-VFIQERVGRAKKPFTLIKFRTMKV  59
            M R+FD+  SL ++I+  P+L+++ +   +++ +P VF Q+R G  +K F + KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DTasvashlasvss-ITKLGGFLRKTKLDELPQLWNVLKGDMSLVGPRPNLFNQDELIAE  118
            DT++VA++    +  ITK G F+RKT LDELPQL N+LKGDM++VGPRP L+NQ ELI  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  REALGIYAVRPGITGLAQINEIDMST  144
            R  + +  V+PG+TGLAQ+   D +T
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNT  146

463) CA2559_10743 in NC_014230


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 68/154 (45%), Positives = 107/154 (70%), Gaps = 4/154 (2%)

Query  38   NQGSPFFYQLRPGKHGQIFKIIKFKTMRDDTD--SKGRLLSDAERLTSFGKIVRKTSLDE  95
            ++G+  F Q RPG   ++FKI KF++MR+DT   + +RL   A+ +T  GK++RKTSLDE
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL-DPADYITKTGKFIRKTSLDE  90

Query  96   IPQLLNVIKGDMSIVGPRP-LLPAYLKLYSEEQHKRHIVKPGITGWAQVNGRNAISYTEK  154
            +PQL+N++KGDM++VGPRP L   Y  +    + + H+VKPG+TG AQV GR+  +  +K
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  155  FKFDVWYVNNISFSLDIKIILKTVEKVFKGSDIN  188
             ++D  YV+N SF LD+ II KT+ + + + +++
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

464) B739_1134 in NC_018609


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 70/160 (44%), Positives = 111/160 (70%), Gaps = 2/160 (1%)

Query  2    ILLTISSEGKPFFFQKRPGLNERIFSIIKFKTM-NDKKDAQGNLLSDAERLTVVGKFVRK  60
            I + I S G   F Q RPG+++++F I KF++M +D  +   + L  A+ +T  GKF+RK
Sbjct  26   IAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRK  85

Query  61   TSLDEIPQLLNVIKGDMSLIGprpllpqylplyNEEQK-KRHNVRPGITGWAQVNGRNAI  119
            TSLDE+PQL+N++KGDM+++GPRP L +   L +   + + H V+PG+TG AQV GR+  
Sbjct  86   TSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNN  145

Query  120  SWQQKFEYDAWYVHNLSLSLDIKILFLTVKKVFVSEGISQ  159
            + +QK +YD  YV+N S+ LD+ I++ T+K+ + SEG+S+
Sbjct  146  TDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

465) Dtox_2852 in NC_013216


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 63/152 (42%), Positives = 105/152 (70%), Gaps = 3/152 (1%)

Query  33   MALLIKFTSPGEIVFKQKRLGLHGQVFWMFKFRSMVKNAVNIGSGMFVEENDSRITPVGK  92
            +++ IK+ S G IVFKQ R G+  ++F ++KFRSM +++ N++++ +  +    IT  GK
Sbjct  24   VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRL--DPADYITKTGK  81

Query  93   LLRKTSLDELPQLFNVLKGEMSLIGPRPAPLHHFAKYDLR-QIERLSVRPGITGWAQVNG  151
            ++RKTSLDELPQLFN+LKG+M+++GPRPA  +++   + R +++   V+PG+TG AQV G
Sbjct  82   FIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMG  141

Query  152  RVALYWPERIEMDLWYIKNYSLGLDLKILLMT  183
            R      ++++ D  Y+ N S+ LD+ I+  T
Sbjct  142  RDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

466) Rumal_0401 in NC_014833


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.5 bits (351),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 117/186 (63%), Gaps = 18/186 (9%)

Query  49   VKRAFDIACSFMALTVLAPMMLIVMVLIVIDDFGNPIYTQERVGKNGKLFKIYKFRSMYk  108
            +KR FDI  S+ A+ ++ P++++V + I I+  G  ++ Q+R G + KLFKIYKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM--  58

Query  109  kadkkleelkaMDECKGATFKMKNDPRITKIGSIIRKTSIDELPQLINILKGDMSIIGPR  168
                        D  + AT ++     ITK G +IRKTS+DELPQL+NILKGDM+++GPR
Sbjct  59   ----------RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  169  PFIPREQANLPEDR-----LLVTPGLSCYWQIGGKNSLTTEEQIELDRKYIKDRSVFVDL  223
            P    +Q +L E R      LV PGL+   Q+ G+++ T +++++ D+ Y+ ++S  +D+
Sbjct  109  P-ALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDM  167

Query  224  KIIIKT  229
             II KT
Sbjct  168  YIIYKT  173

467) VS_0233 in NC_011753


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 68/151 (46%), Positives = 98/151 (65%), Gaps = 3/151 (1%)

Query  35   DTGSPVFIQERVGRNKKPFKLIKFRTMSVETKSVAS-HLASDASITKLGGFLRKTKIDEL  93
              G+ VF Q+R G ++K FK+ KFR+M  +T +VA+ +L +   ITK G F+RKT +DEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  94   PQLINVVKGEMSLVGPRPNLFNQEELIKVREAQGVYDVLPGVTGLAQVQNIDMSTPDLLA  153
            PQL+N++KG+M++VGPRP L+NQ ELI  R    V  V PG+TGLAQV   D +T D   
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  154  KTDKKMID--TLTLKDYFKYILMTATGSGSG  182
            + DK  ++  ++ L  Y+ Y  +  T S+ G
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

468) Sbal223_1485 in NC_011663


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.3 bits (350),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 66/154 (43%), Positives = 101/154 (66%), Gaps = 5/154 (3%)

Query  31   DTGSPIFIQTRIGRHKKPFSLVKFRTMSKDTVSVAS-HLASNASITKFGGFLRKTKIDEL  89
              G+ +F Q R G  +K F + KFR+M +DT +VA+ +L +   ITK G F+RKT +DEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  90   PQLINVLKGEMSLVGPRPNLFNQEELIVERDALGVYNVQPGVTGLAQVQNIDMSTPKLLA  149
            PQL+N+LKG+M++VGPRP L+NQ ELI  R  + V  V+PG+TGLAQV   D +T     
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  ETDKQMID--TLNIKNYFKYILMTVTGSGSGDAV  181
            + DK  ++  ++++  Y+ Y   T+  + S+++V
Sbjct  152  QYDKFYVENQSFKLDMYIIY--KTIKNTISSEGV  183

469) Clst_0134 in NC_020887


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.0 bits (349),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 72/158 (46%), Positives = 108/158 (69%), Gaps = 2/158 (1%)

Query  2    DIVMSLIAIIILSPvllliaalvkiklGSPVIFKQKRPGLNEKIFTLYKFRTM-TDARDE  60
            DI  SL AIII+ P+L+L++  +KI   +P++FKQ RPG+++K+F +YKFR+M  D+ + 
Sbjct  6    DIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNV  65

Query  61   NGMLLPDNVRLTRFGRMLRSTSLDELPELFNILKGDMSFVGPRPQLVKDLVFMTPQQR-K  119
                L     +T+ G+ +R TSLDELP+LFNILKGDM+ VGPRP L ++  ++  +   +
Sbjct  66   ATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVN  125

Query  120  RHSVLPGLTGWAQINGRNGITWEEKLELDLEYIKNISF  157
             H V PGLTG AQ+ GR+  T ++K++ D  Y+ N SF
Sbjct  126  VHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSF  163

470) Dda3937_02272 in NC_014500


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 93/140 (67%), Gaps = 3/140 (2%)

Query  31   DTGSPVFIQQRVGRHQRPFNLIKFRTMAVTTESVAT-HLASRSSVTKLGAFLRKTKLDEL  89
              G+ VF Q+R G  ++ F++ KFR+M   T +VAT +L +   +TK G F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  90   PQLINVLKGEMSLVGPRPCLFNQQELIAERQARGVFEVLPGITGLAQVNAIDMSTPQKLA  149
            PQL+N+LKG+M++VGPRP L+NQ ELI  R    V  V PG+TGLAQV + D +T ++  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  EWDQRMI--QTLSVKHYFTY  167
            + D+  +  Q++ +  Y+ Y
Sbjct  152  QYDKFYVENQSFKLDMYIIY  171

471) M5M_13285 in NC_018868


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 97.0 bits (349),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 68/169 (41%), Positives = 102/169 (61%), Gaps = 14/169 (8%)

Query  53   IRIESPGAVIYTQIRVGVNGRRFRIYKFRSMRCPNDPKYPPAEALQSDREGICQKMYRDP  112
            I+IES G++++ Q R GV+ + F+IYKFRSMR             Q   +   +++    
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR-------------QDTPNVATDRLDPAD  74

Query  113  RITRVGAIIRKLSIDELPQLFNVVLGDMALIGPRPALEREVAQYQMRAMERLD-AMPGLT  171
             IT+ G +IRK S+DELPQLFN++ GDMA++GPRPAL  +    + R+   ++   PGLT
Sbjct  75   YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLT  134

Query  172  GLWQVSGRADTTFDEQIDLDLRYVRGQSLWLDMKILCLTVPAVLFGKGA  220
            GL QV GR + T D++++ D  YV  QS+ LDM I+  T+   + + G 
Sbjct  135  GLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

472) ELI_13365 in NC_007722


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.8 bits (348),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 67/151 (45%), Positives = 101/151 (67%), Gaps = 2/151 (1%)

Query  38   SPVLFRQTRPGLGEELFDLYKFRTMTDD-RDPNGNLLPDAQRMTKLGAFLRSTSLDELPS  96
            +P++F+Q RPG+ + LF +YKFR+M +D  +   + L  A+ +TK G F+R TSLDELP 
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  97   LLNVLKGDLSLVGprpllpqylplyNERQR-RRHNVRPGITGWAQVNGRNAVDWEERFAL  155
            L+N+LKGD+++VGPRP L +   L + R     H V+PG+TG AQV GR+    +++   
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  156  DIWYVENRSLILDIKIILMTLSKVFRREGIS  186
            D  YVEN+S+ LD+ II  T+ + +  EG+S
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

473) epsE1 in NC_017542


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.8 bits (348),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 123/188 (66%), Gaps = 20/188 (10%)

Query  38   KRLLDMLLSFVGLIVLLPLFAVVAILIKLEDPKGSVFFKQTRVGKNEKLFDMYKFRSMVS  97
            KR++D++ S+ ++I++LPL+ +V+I IK+E +KG++ FKQ R G ++KLF +YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  98   NAEELKKDLMELNEVSGAMFKIKNDPRITKIGSFLRKTSIDEIPQLWNVLVGDMTLVGPR  157
            ++ ++  D ++  +             ITK G F+RKTS+DE+PQL N+L GDM++VGPR
Sbjct  61   DTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  158  PPLPSEVEQYSDYDKQRLI----VTPGCTGYWQVSARNSVGFEEMVQMDLKYIHVRNTWL  213
            P+L    +QY   +K+  +    V PG TG  QV +R++   ++ VQ D  Y++ ++  L
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  214  DLKIIMKT  221
            D+ II KT
Sbjct  166  DMYIIYKT  173

474) PPSC2_c1203 in NC_014622


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.8 bits (348),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 76/188 (41%), Positives = 123/188 (66%), Gaps = 20/188 (10%)

Query  38   KRLLDMLLSFVGLIVLLPLFAVVAILIKLEDPKGSVFFKQTRVGKNEKLFDMYKFRSMVS  97
            KR++D++ S+ ++I++LPL+ +V+I IK+E +KG++ FKQ R G ++KLF +YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  98   NAEELKKDLMELNEVSGAMFKIKNDPRITKIGSFLRKTSIDEIPQLWNVLVGDMTLVGPR  157
            ++ ++  D ++  +             ITK G F+RKTS+DE+PQL N+L GDM++VGPR
Sbjct  61   DTPNVATDRLDPADY------------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  158  PPLPSEVEQYSDYDKQRLI----VTPGCTGYWQVSARNSVGFEEMVQMDLKYIHVRNTWL  213
            P+L    +QY   +K+  +    V PG TG  QV +R++   ++ VQ D  Y++ ++  L
Sbjct  109  PAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

Query  214  DLKIIMKT  221
            D+ II KT
Sbjct  166  DMYIIYKT  173

475) Acear_2136 in NC_014378


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.5 bits (347),  Expect = 7e-22, Method: Compositional matrix adjust.
 Identities = 72/164 (44%), Positives = 111/164 (68%), Gaps = 14/164 (8%)

Query  62   KLESPGPIIFKQDRLGLNGEEFTIYKFRSMVENAESKTGPVWAKKNDSRVTKVGRFIRKT  121
            K+ES GPI+FKQDR G++   F IYKFRSM +++ ++ +  +    D  +TK G+FIRKT
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDT-PNVATDRLDPADY-ITKTGKFIRKT  86

Query  122  RIDELPQFVNILRGDMSLVGPRPERAVFVQKFSEDYPNFIDRLK-----VKPGVTGLAQV  176
             +DELPQ+ NIL+GDM++VGPRP  A++     ++Y  +  R +     VKPG+TGLAQV
Sbjct  87   SLDELPQLFNILKGDMAVVGPRP--ALY-----NQYELIEKRTNVNVHLVKPGLTGLAQV  139

Query  177  TGGYELSPHQKSRLDLLYIEKQGLLLDIMILLKTVLVVIFGDGA  220
             G  + + +QK + D +Y+E+Q++ LD+ I+ KT+   I ++G 
Sbjct  140  MGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

476) Dfer_3631 in NC_013037


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.5 bits (347),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 61/142 (43%), Positives = 95/142 (67%), Gaps = 12/142 (8%)

Query  43   FTQQRPGHYGRLFTILKFRTMFPDGRPVC-----------RFGKLLRKTSLDELPQFWNV  91
            F Q+RPG   +LF I KFR+M  D   V            + GK++RKTSLDELPQ+ N+
Sbjct  38   FKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNI  97

Query  92   LRGEMSIVGPRPLLADYLALYNSHQHLR-HNVKPGITGLAQISGGNGLSWNEKFDYDRYY  150
            L+G+M++VGPRP L +   L + + ++  H VKPG+TGLAQ+ G +  + ++K +YD++Y
Sbjct  98   LKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFY  157

Query  151  VESHSLSLDCRIIFTTFSKAFS  172
            VE++S+ LD  II+ T+ +++S
Sbjct  158  VENQSFKLDMYIIYKTIKNTIS  179

477) VCLMA_A0229 in NC_017270


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.5 bits (347),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 65/154 (43%), Positives = 104/154 (68%), Gaps = 5/154 (3%)

Query  32   DTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVAT-HLVGASSVTRLGQFLRKTKLDEL  90
              G+ +F Q+R G +++ F + KFR+M ++T++VAT +L  A  +T+ G+F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPCLFNQQDLIVEREARGVFTVLPGITGLAQVNEVDMSTPVKLA  150
            PQL+N+LKG+M++VGPRP L+NQ +LI  R    V  V PG+TGLAQV   D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  ELDQQMI--QTLNLKNYFTY--IIQTVLGKGAGD  180
            + D+  +  Q+++L  Y+ Y  I +T+ + G ++
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

478) VC395_0292 in NC_012582


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.5 bits (347),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 65/154 (43%), Positives = 104/154 (68%), Gaps = 5/154 (3%)

Query  32   DTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVAT-HLVGASSVTRLGQFLRKTKLDEL  90
              G+ +F Q+R G +++ F + KFR+M ++T++VAT +L  A  +T+ G+F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPCLFNQQDLIVEREARGVFTVLPGITGLAQVNEVDMSTPVKLA  150
            PQL+N+LKG+M++VGPRP L+NQ +LI  R    V  V PG+TGLAQV   D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  ELDQQMI--QTLNLKNYFTY--IIQTVLGKGAGD  180
            + D+  +  Q+++L  Y+ Y  I +T+ + G ++
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

479) VC0395_A2640 in NC_009457


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.5 bits (347),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 65/154 (43%), Positives = 104/154 (68%), Gaps = 5/154 (3%)

Query  32   DTGSPIFCQQRVGKNQRPFTLIKFRTMPKNTASVAT-HLVGASSVTRLGQFLRKTKLDEL  90
              G+ +F Q+R G +++ F + KFR+M ++T++VAT +L  A  +T+ G+F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  91   PQLINVLKGEMSLVGPRPCLFNQQDLIVEREARGVFTVLPGITGLAQVNEVDMSTPVKLA  150
            PQL+N+LKG+M++VGPRP L+NQ +LI  R    V  V PG+TGLAQV   D +T  +  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  151  ELDQQMI--QTLNLKNYFTY--IIQTVLGKGAGD  180
            + D+  +  Q+++L  Y+ Y  I +T+ + G ++
Sbjct  152  QYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

480) Ppha_0574 in NC_011060


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.5 bits (347),  Expect = 8e-22, Method: Compositional matrix adjust.
 Identities = 63/155 (41%), Positives = 101/155 (66%), Gaps = 8/155 (5%)

Query  35   SPLFFTQVRPGRHGKPFRMCKFRTMTDARDDIG-NLLPDQERLTSLGRFLRATSLDEFPE  93
            +P+ F Q RPG   K F++ KFR+M +   +++ + L   + +T  G+F+R TSLDE+P+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  94   LINVLKGDMSLVGPRPLLMEYLSRYSPEQNRR----HDVKPGMTGWAQINGRNAISWDEK  149
            L+N+LKGDM++VGPRP L    ++Y   ++R     H VKPG+TG AQ+ GR+  + D+K
Sbjct  94   LFNILKGDMAVVGPRPAL---YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  150  FILDVWYVDNRSLWLDVRILAITMLNVVLRKGINH  184
               D  YV+N+S+ LD+ I+  T+ N +   G++H
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

481) wcgN in NC_016001


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.5 bits (347),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 66/157 (43%), Positives = 101/157 (65%), Gaps = 8/157 (5%)

Query  36   ANSGQPFFFQKRPGKNGHIFTIIKFKTM-NDKKDALGNLLDDAHRLTKIGYFIRKTSLDE  94
             + G   F Q RPG +  +F I KF++M +D  +   + LD A+ +TK G FIRKTSLDE
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDE  90

Query  95   ITQLINVAKGEMSFIGPRPLLPEYLSLYSVEQNRR----HEVTPGITGWAQVNGRNAISW  150
            + QL+N+ KG+M+ +GPRP L  Y + Y + ++R     H V PG+TG AQV GR+  + 
Sbjct  91   LPQLFNILKGDMAVVGPRPAL--Y-NQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  151  KQKFEFDVWYVDHCTFILDLKIVFMTIKKILIKEGIT  187
             QK ++D  YV++ +F LD+ I++ TIK+ +  EG++
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

482) Sph21_2065 in NC_015277


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.5 bits (347),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 80/191 (42%), Positives = 130/191 (69%), Gaps = 14/191 (7%)

Query  64   KRSFDIVFSLVALILGFPLFLLVAIITKLSSKGPVFYKQERIGLHEKPFFIYKFRSMYID  123
            KR FDI  SL A+I+ +PL++LV+I  K+ SKGP+ +KQ+R G+ +K F IYKFRSM  D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  124  AEKFGPQLAQD-VDPR--ITPWGRLMRKTRLDEIPQFWNVLKGDMSIVGPRPER-AHFIK  179
            +    P++A D +DP   IT  G+++RKT LDE+PQ+ N+LKGDM++VGPRP    ++  
Sbjct  62   T----PNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY--  115

Query  180  QIVDKAPSYKKLLTIKPGITSIGQVNFGYAQTVDEMCERMLLDLQYLQGINFFADLQIIF  239
            ++++K  + +  L +KPG+T+++QV  G  +  D+  +++  D  Y++  +F  D+ II+
Sbjct  116  ELIEKRTNVNVHL-VKPGLTGLAQV-MGRDNNTDD--QKVQYDKFYVENQSFKLDMYIIY  171

Query  240  KTVKVMFQGKG  250
            KT+K  + + G
Sbjct  172  KTIKNTISSEG  182

483) SY1_13610 in NC_021038


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.2 bits (346),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 61/145 (43%), Positives = 94/145 (65%), Gaps = 4/145 (2%)

Query  20   PVMLAVAVCVRRRMGSPAVFVQTRAGRGGRPFALYKFRSMTDER-GPDGNLLPDAERLTP  78
            P+++ V++ ++    +P VF Q R+G   + F +YKFRSM ++      + L  A+ +T 
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITK  78

Query  79   FGRFLRRTSLDELPQLWNVLRGDMSLVGPRP-LLTQYVPLYDARQRKRLD-VRPGITGWA  136
             G+F+R+TSLDELPQL N+L+GDM++VGPRP L  QY  L + R    ++ V+PG+TG A
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY-ELIEKRTNVNVHLVKPGLTGLA  137

Query  137  QVNGRNALSWPAKFELDVWYVEHRS  161
            QV GR+  +   K + D  YVE++S
Sbjct  138  QVMGRDNNTDDQKVQYDKFYVENQS  162

484) F7308_0841 in NC_015696


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.2 bits (346),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 89/185 (49%), Positives = 133/185 (72%), Gaps = 2/185 (1%)

Query  6    LKRFLDIVLSFVGLVLLSPVFLIVIFMIKKDSKGPILfkqkrygkgkkffyiykfrTMYV  65
            +KR++DI  S+ +++++ P++++V + IK +SKGPI+FKQ R G  +K+F IYKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DTPKDMPTHMLQDPSKCITKVGAFLRKTSLDELPQIINILKGEMSIVGPRPALWNQDDLI  125
            DTP +++T+ L DP+  ITK G F+RKTSLDELPQ++NILKG+M++VGPRPAL NQ +LI
Sbjct  61   DTP-NVATDRL-DPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELI  118

Query  126  AERDKYGANDVPVGLTGWAQINGRDELPIAQKAKLDGDYVKYKSTWFDIKCIFLTVLSVF  185
              R +   + V  GLTG AQ+ GRD+    QK + D  YV  +S  +D+  I+ T+ + +
Sbjct  119  EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTI  178

Query  186  ASSGV  190
            +S GV
Sbjct  179  SSEGV  183

485) C269_03375 in NC_018631


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.2 bits (346),  Expect = 9e-22, Method: Compositional matrix adjust.
 Identities = 66/152 (44%), Positives = 99/152 (66%), Gaps = 12/152 (7%)

Query  39   GPVFFKQERIGKNAKSFMMWKIRSMVTNAEEIRNALIEQSDVDGMFKMKEDPRVTKIGKF  98
            GP+ FKQ+R G + K F + K+RSM  ++ ++    ++ +D            +TK GKF
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-----------ITKTGKF  82

Query  99   IRKHSLDELPQFWNVLKGDMSLVGPRPALREEVENYPKRAMLRLN-VKPGITGLWQVNGR  157
            IRK SLDELPQ+ N+LKGDM++VGPRPAL ++ E   KR+ + ++ VKPG+TGL QV GR
Sbjct  83   IRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGR  142

Query  158  SNVDFDTMIDLDLKYIANRSLWGDIVILFKTV  189
             N   D  ++ D  Y+ N+S+  D+ I++KT+
Sbjct  143  DNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

486) CPE0473 in NC_003366


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 66/152 (44%), Positives = 104/152 (69%), Gaps = 2/152 (1%)

Query  43   SPIIFTQERVGKDNKIFKMVKFRTMK-ECIDKDGNILPDEERLTSFGKKLRSSSLDELPE  101
            +PI+F Q+R G  NK+FK+ KFR+M+ +  +   + L   + +T  GK +R +SLDELP+
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  102  LINILKGDMSLVGPRP-LLVDYLPLYSKEQIRRHEVLPGLTGWAQVNGRNNLIWNEKFEL  160
            L+NILKGDM++VGPRP L  +Y  +  + ++  H V PGLTG AQV GR+N   ++K + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  161  DVYYVENWSLTLDLKIFFLTFYKVFKREGINQ  192
            D +YVEN S+ LD+ I++ T+ + +  EG+++
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

487) SJA_C1-34810 in NC_014006


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 61/147 (42%), Positives = 94/147 (64%), Gaps = 2/147 (1%)

Query  37   PVLFRQARSGLGGRPFAMIKFRSMR-DLRDGQGALLPDAQRITAVGRFLRRSRLDELPEL  95
            P++F+Q R+G+  + F + KFRSMR D  +     L  A+ IT  G+F+R++ LDELP+L
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  96   INIARGEMDFVGPRPLLPHSIAAMG-RDGVERGKVRPGLTGLAQVSGNTLLSVEEKLRFD  154
            +NI +G+M  VGPRP L +    +  R  V+   V+PGLTGLAQV G    + ++K+++D
Sbjct  95   FNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYD  154

Query  155  LCYVRRRSARLDAQIIARTLLVVIGGE  181
              YV  +S +LD  II +T+   I++E
Sbjct  155  KFYVENQSFKLDMYIIYKTIKNTISSE  181

488) Desde_3862 in NC_018017


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 69/170 (41%), Positives = 104/170 (62%), Gaps = 25/170 (14%)

Query  28   IWIKVDSPGPAIFRQQRVGLKGEHFTIYKFRTMVPDADRVMKAKIEQLKKEGKFNADEFV  87
            I IK++S GP +F+Q+R G+K   F IYKFR+M  D+  V   +++         + ++ 
Sbjct  26   IAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD---------PADY-  75

Query  88   FQEKDDPRITGSGRFLRMTSLDELPQLLNIVNGTMSLVGPRPEVPEIVEQYT-SEQRQRL  146
                    IT +G+F+R TSLDELPQL+NI++G M++VGPR   P + +QY   E+R  +
Sbjct  76   --------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR---PALYNQYELIEKRTNV  124

Query  147  NMP---PGVTGLAQINGRSALTLSETLNYDVQYVKNWSLWSDIKILWKTI  193
            N+    PG+TGLAQ+ GR   T  + ++YD  YV N S+  D+ I+ KTI
Sbjct  125  NVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

489) TOL_2267 in NC_020888


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 95.7 bits (344),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 61/132 (47%), Positives = 91/132 (69%), Gaps = 1/132 (0%)

Query  4    KFRTMKVDTESVAT-HLASATSVTKLGSFLRKTKLDELPQLWNVLKGDMSLVGPRPNLLN  62
            KFR+M+ DT +VAT +L +A  +TK G F+RKT LDELPQL N+LKGDM++VGPRP L N
Sbjct  54   KFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN  113

Query  63   QTELIIERSALDVYAVRPGITGLAQLSGIDMSTPRDLANIDAKMIKEMSLKSYFSMIFKT  122
            Q ELI  R+ ++V  V+PG+TGLAQ+ G D +T  +  + D   + + S+K    +I+KT
Sbjct  114  QYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

Query  123  LGGGGTGDRIRN  134
            +    +++ + +
Sbjct  174  IKNTISSEGVSH  185

490) MI1_06335 in NC_016805


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 95.7 bits (344),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 69/161 (43%), Positives = 104/161 (65%), Gaps = 13/161 (8%)

Query  31   AIQVKKDG-GPIFFKQERIGKCGKPFMMWKIRSMITNAEEIRQNLLEQSDVDGMFKMKED  89
            +I +K ++ GPI FKQ+R G   K F + K+RSM  ++ ++  + L+ +D          
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY---------  75

Query  90   PRVTKIGKFIRRHSLDELPQFWNVLKGDMSLVGPRPALREEVENYPKRAMLRLN-VKPGI  148
              +TK GKFIR+ SLDELPQ+ N+LKGDM++VGPRPAL ++ E   KR+ + ++ VKPG+
Sbjct  76   --ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGL  133

Query  149  TGLWQVNGRSNVDFDTMIDLDLKYIANRSLWGDIVILCKTV  189
            TGL QV GR N   D  ++ D  Y+ N+S+  D+ I+ KT+
Sbjct  134  TGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

491) TK90_0609 in NC_013889


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 95.4 bits (343),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 77/189 (41%), Positives = 127/189 (68%), Gaps = 7/189 (3%)

Query  5    LKRLFDILSSMaallvlaplllliaiairlDSPGSILFRQRRIGFNGQPFRVLKFRTMVD  64
            +KR+FDI+SS+ A++++ PLL+L++IAI+++S G+I+F+Q R G + + F++ KFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  65   RDPDAIDQHQEQVVSTGVDPRITRVGRWLRATSLDELPQLWNILRGDMSVVGPRPILPEQ  124
              P+   ++ +          IT+ G+ +R TSLDELPQL NIL+GDM+VVGPRP L +Q
Sbjct  61   DTPNVATDRLDP------ADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQ  114

Query  125  VEVVPPSYASRFS-VRPGLTGLAQVRGRRTLGWIQQLEADTEYAAQHNLLYDLGLILKTV  183
             E++          V+PGLTGLAQV GR      Q+++ D  Y  ++++  D+ +I KT+
Sbjct  115  YELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

Query  184  YVVLTGQGV  192
               ++++GV
Sbjct  175  KNTISSEGV  183

492) CPS_3248 in NC_003910


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 95.2 bits (342),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 72/169 (43%), Positives = 104/169 (62%), Gaps = 16/169 (9%)

Query  59   KVESSGSALFSQTRVGENGRHFKMYKFRSMYLKTDPNYKEPDPTQSSREGVCKKYINDPR  118
            K+ES G+ +F Q R G + + FK+YKFRSM        ++  P  ++       YI    
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSM--------RQDTPNVATDRLDPADYI----  76

Query  119  ITKIGQFIRKYSIDEIPQLFNIVRGDMCLVGPRPALSIETYEY-DNNDQTRL-FTKPGLT  176
             TK G+FIRK S+DE+PQLFNI++GDM +VGPRPAL  + YE  ++  +  + + KPGLT
Sbjct  77   -TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL-YNQYELIEKRTNVNVHLVKPGLT  134

Query  177  GLWQVSGRADTNFEEQLQLDKTYIKQQSFLMDCKIIALTIPAVLSAKGA  225
            GL QV GR +   ++++Q DK Y+ +QSF +D  II  TI   +S+ G 
Sbjct  135  GLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

493) Ctha_2149 in NC_011026


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 95.2 bits (342),  Expect = 2e-21, Method: Compositional matrix adjust.
 Identities = 61/146 (42%), Positives = 106/146 (73%), Gaps = 3/146 (2%)

Query  30   IALAIKLESKGPVFFNQIRLGREGKTFNLYKFRTMTDNPARVHGSTEVFENNPEVTKVGN  89
            +++AIK+ESKGP+ F+Q R G   K F++YKFR+M ++ + V  +T+ ++    +TK G+
Sbjct  24   VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNV--ATDRLDPADYITKTGK  81

Query  90   ILRRYKIDELPQLINVFKGDMSIVGPRPMLPQQEEVFDQNGKKRLDVL-PGCTGLAQVNG  148
            ++R+  +DELPQL+N++KGDM++VGPRP L +Q E++++  +  ++++ PG TGLAQV G
Sbjct  82   FIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMG  141

Query  149  NIYLPWNERWKYDAYYVDNLSLFLDI  174
                  +++ +YD +YV+N S+ LD+
Sbjct  142  RDNNTDDQKVQYDKFYVENQSFKLDM  167

494) DDD_3536 in NC_020156


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 94.9 bits (341),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 65/152 (43%), Positives = 101/152 (67%), Gaps = 1/152 (0%)

Query  27   VIALIIYIQDFGTPIFKQKRLGKNGEEFLFYKFRSMPLDTPDLESKERDKLE-ITPFGTF  85
            ++++ I I+  G  +FKQ R G +   F +YKFRSM  DTP++ +   D  + IT  G F
Sbjct  23   LVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKF  82

Query  86   IRRTNLDELPQFFNVLVGDMSFIGPRPPILKQLSLIKLRKENGSLNLRPGLTGWAQVNSY  145
            IR+T+LDELPQ+FN+L GDM+ +GPRP++ +Q  LI  R +     ++PGLTG AQV + 
Sbjct  83   IRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGR  142

Query  146  DNMPENIKAKFDGEYYDKISLKMDLKILLKTV  177
            DN  ++ K ++D  Y ++ S+K+D+ I+ KT+
Sbjct  143  DNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

495) SELR_26920 in NC_017068


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 94.7 bits (340),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 69/156 (45%), Positives = 98/156 (63%), Gaps = 4/156 (2%)

Query  35   IKMKGNPFFTQERPGCHEKVFKLIKFRTMTNDKDKDGT--LLPDEFRLNAYGKFLRSTSL  92
            I  KG   F Q+RPG  +K+FK+ KFR+M +D  + +T  L P ++  ++ GKF+R TSL
Sbjct  30   IESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKT-GKFIRKTSL  88

Query  93   DELPELFNILAGHMSIVGPRPLL-VRYLPWYTEEQSHRHDVRPGLTGYAQAHGRNAVNWD  151
            DELP+LFNIL G+M++VGPRP L  +Y       + + H V+PGLTG AQ  GR+    D
Sbjct  89   DELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDD  148

Query  152  DKFAMDLKYVERITFIGDLRIIVDTVKAVVKREGIN  187
            +K   D  YVE  +F  D+ II  T+K  +  EG++
Sbjct  149  QKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

496) G148_0877 in NC_020125


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 94.7 bits (340),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 131/184 (72%), Gaps = 2/184 (1%)

Query  7    KRVIDFSLALIGFILLLPVFLIVMVLLTIANQGKPFFFQKRPGKNERIFSIIKFKTM-ND  65
            KR++D+  +L ++I++LP++++V + + I ++G   F Q RPG ++++F I KF++M +D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  66   KKDTNGNLLSDAERLTAIGKLVRKTSLDEIPQLLNVIKGDMSLVGprpllpqylplyDEE  125
              +   + L  A+ +T  GK++RKTSLDE+PQL+N++KGDM++VGPRP L +   L +  
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  126  QK-KRHNVRPGITGWAQINGRNAISWQQKFEYDVWYVHNLSLFLDIkvlfltvkkvfvSE  184
             + + H V+PG+TG AQ+ GR+  + +QK +YD  YV+N S+ LD+ +++ T+K+ + SE
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  185  GISQ  188
            G+S+
Sbjct  182  GVSH  185

497) RIA_1504 in NC_017569


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 94.7 bits (340),  Expect = 3e-21, Method: Compositional matrix adjust.
 Identities = 74/184 (41%), Positives = 131/184 (72%), Gaps = 2/184 (1%)

Query  7    KRVIDFSLALIGFILLLPVFLIVMVLLTIANQGKPFFFQKRPGKNERIFSIIKFKTM-ND  65
            KR++D+  +L ++I++LP++++V + + I ++G   F Q RPG ++++F I KF++M +D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  66   KKDTNGNLLSDAERLTAIGKLVRKTSLDEIPQLLNVIKGDMSLVGprpllpqylplyDEE  125
              +   + L  A+ +T  GK++RKTSLDE+PQL+N++KGDM++VGPRP L +   L +  
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKR  121

Query  126  QK-KRHNVRPGITGWAQINGRNAISWQQKFEYDVWYVHNLSLFLDIkvlfltvkkvfvSE  184
             + + H V+PG+TG AQ+ GR+  + +QK +YD  YV+N S+ LD+ +++ T+K+ + SE
Sbjct  122  TNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSE  181

Query  185  GISQ  188
            G+S+
Sbjct  182  GVSH  185

498) CPR_0584 in NC_008262


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 94.4 bits (339),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 64/153 (42%), Positives = 99/153 (65%), Gaps = 13/153 (8%)

Query  47   KGPIFFSQERVGFKGKTFNMYKFRSMVINAEEIKEKLKEQNEMSGPMFKMKNDPRITKIG  106
            KGPI F Q+R G K K F++YKFRSM  ++ ++               ++     ITK G
Sbjct  33   KGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATD------------RLDPADYITKTG  80

Query  107  KFIRRTSIDELPQLINVLKGEMTLVGPRPSLPKEVVEFEPWMMERLT-VKPGLTCYWQVM  165
            KFIR+TS+DELPQL+N+LKG+M++VGPRP+L ++   +E +    +  VKPGLT   QVM
Sbjct  81   KFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVM  140

Query  166  GRNSIVFEDWMKLDVKYVNERCLSLDIKLIFKT  198
            GR++   ++ ++ D  YV+++ + LD+ +I+KT
Sbjct  141  GRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

499) GTNG_3263 in NC_009328


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 94.4 bits (339),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 73/180 (41%), Positives = 110/180 (62%), Gaps = 26/180 (14%)

Query  30   KRIMDICGALAGLICLSWLFLIVALLIKLEDPKGPVFFKQIRVGKDGKEFYMYKFRSMVT  89
            KRI DI ++L ++I +  L+++V++ IK+E +KGP+ FKQ R G   K F +YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  90   NAEELLDSLLHLNETTGAMFKMKNDPRVTKIGRFIRKTSIDELPQLWNVLKGEMSLVGPR  149
            ++ ++               ++     +TK G+FIRKTS+DELPQL N+LKG+M++VGPR
Sbjct  61   DTPNVATD------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  150  PPLPREVAQYTEYD--KQRL-----LVTPGCTGLWQVSGRSNVGFEEMVELDLKYIRERS  202
            P+L      Y +Y+   +R      LV PG TGL QV GR N   ++ V+ D  Y+ ++S
Sbjct  109  PAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQS  162

500) Dd703_3271 in NC_012880


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 94.1 bits (338),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 60/133 (46%), Positives = 88/133 (67%), Gaps = 1/133 (0%)

Query  31   DTGSPVFIQQRVGRHQRPFNLIKFRTMAVATESVAT-HLASRSSVTPLGAFLRKTKLDEL  89
              G+ VF Q+R G  ++ F++ KFR+M   T +VAT +L +   +T  G F+RKT LDEL
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDEL  91

Query  90   PQLINVLRGEMSLVGPRPCLFNQQELIAERQARGVFDVLPGITGLAQVNAIDMSTPQKLA  149
            PQL+N+L+G+M++VGPRP L+NQ ELI  R    V  V PG+TGLAQV + D +T ++  
Sbjct  92   PQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKV  151

Query  150  EWDQRMIQTLSVK  162
            + D+  ++  S K
Sbjct  152  QYDKFYVENQSFK  164

501) Swoo_1664 in NC_010506


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 94.1 bits (338),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 72/162 (45%), Positives = 113/162 (70%), Gaps = 2/162 (1%)

Query  24   VVGIKVAIELGRPVIFKQNRPglkgkifklfkfRSMKDAVNEDGI-PLPDSERLSSFGEA  82
            +V+I + IE   P++FKQ+RPG+K K+FK++KFRSM++   + +   L  ++ ++  G  
Sbjct  23   LVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKF  82

Query  83   LRATSLDELPSLLNVIKGDMSLVGPRP-LLVEYLPLYNTEQATRHNVRPGITGWAQVNGR  141
            +R TSLDELP L+N++KGDM++VGPRP L  +Y  + +  +   H V+PG+TG AQV GR
Sbjct  83   IRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGR  142

Query  142  NAISWEQKFEYDVWYVENQSFWLDIKILLLTIRKVFVRDGIS  183
            +  + +QK +YD  YVENQSF LD+ I+  TI++ +  +G+S
Sbjct  143  DNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

502) Acear_2114 in NC_014378


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 93.6 bits (336),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 84/189 (45%), Positives = 136/189 (72%), Gaps = 8/189 (4%)

Query  3    IKRVIDFFGSLVGlvillplfiiisllikiDSKGPVFFKQDRLGKDGEVFEIYKFRTMVE  62
            +KR++D+F+SL +++I+LPL++++S+ IKI+SKGP+ FKQDR G    +F IYKFR+M +
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  63   NAENIGDGLFTSKGDPR--ITKVGKLLRKISLDELPQLINVLKGDMSLIGprppvpyypy  120
            ++ N++    T + DP   ITK GK++RK SLDELPQL+N+LKGDM+++GPRP++     
Sbjct  61   DTPNVA----TDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYE  116

Query  121  kydeySDEQKSRFDVKPGITGYAQINGRNNLSWDERIEYDIEYVKNFSLLLDLKIIFSTL  180
              +  ++ +     VKPG+TG AQ+ GR+N + D++++YD  YV N S+ LD+ II+ T+
Sbjct  117  LIEKRTNVNVHL--VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

Query  181  AIVLKRDGI  189
               +  +G+
Sbjct  175  KNTISSEGV  183

503) Dhaf_4500 in NC_011830


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 70/170 (42%), Positives = 104/170 (62%), Gaps = 25/170 (14%)

Query  28   IWIKVDSPGPAIFRQQRIGLKGEPFTIYKFRTMVPDADRVMKAKIEQLKKEGKFNADEFV  87
            I IK++S GP +F+Q+R G+K   F IYKFR+M  D+  V   +++         + ++ 
Sbjct  26   IAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLD---------PADY-  75

Query  88   FQEKDDPRITGSGRFLRKTSLDELPQLLNIVNGTMSLVGPRPEVPEIVEQYT-PEQRQRL  146
                    IT +G+F+RKTSLDELPQL+NI++G M++VGPR   P + +QY   E+R  +
Sbjct  76   --------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR---PALYNQYELIEKRTNV  124

Query  147  NMP---PGVTGLAQINGRSALTLTETLKYDVQYVKNWSPGADIKILWKTI  193
            N+    PG+TGLAQ+ GR   T  + ++YD  YV N S   D+ I+ KTI
Sbjct  125  NVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

504) Theco_3164 in NC_019897


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 93.6 bits (336),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 65/162 (41%), Positives = 109/162 (68%), Gaps = 2/162 (1%)

Query  1    MKRGFDlaaaavlliilSPVMAVAALLVRIKLGRPVLFRQVRPGLHEKPFVLYKFRTM-A  59
            MKR FD+ ++   +II+ P++ + ++ ++I    P++F+Q RPG+ +K F +YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DLRDESGNLLPDAERLTPFGRKLRTLSLDELPQLFNVLKGDLSLVGPRP-LLMEYLPLYT  118
            D  + + + L  A+ +T  G+ +R  SLDELPQLFN+LKGD+++VGPRP L  +Y  +  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  DEQRQRHLVRPGITGWAQVNGRNAVSWEERFAMDVWYVHNRN  160
              + + HLV+PG+TG AQV GR+  + +++   D  YV+N++
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQS  162

505) pssZ in NC_011916


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 93.3 bits (335),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 68/167 (41%), Positives = 106/167 (64%), Gaps = 20/167 (11%)

Query  56   ESPGPVLFRQSRGGLNGQAFTIFKFRSMRCQENGAEVVQAKRD-DDRITTIGRFIRKTSI  114
            ES GP++F+Q R G++ + F I+KFRSMR  ++ ++V   + D  D IT  G+FIRKTS+
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMR--QDTPNVATDRLDPADYITKTGKFIRKTSL  88

Query  115  DELPQLLNVLRGDMSIVGPRPHALAHDEHYGALI-----ANYHLRFRTRPGLTGLAQIKG  169
            DELPQL+N+L+GDM++VGPRP   A  ++Y  LI      N HL    +PGLTGLAQ+ G
Sbjct  89   DELPQLFNILKGDMAVVGPRP---ALYNQY-ELIEKRTNVNVHL---VKPGLTGLAQVMG  141

Query  170  LRGGTSAVDAMAARIDADNEYIERWTLGGDVKILLMTVPHLLMAENA  216
             R+  +       +++ D+ Y+E  ++  D+ I+  T+ + + +E  
Sbjct  142  -RDNNTD----DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

506) BMD_1115 in NC_014103


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 93.1 bits (334),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 73/171 (43%), Positives = 107/171 (63%), Gaps = 25/171 (14%)

Query  64   DRKGPVYFKQTRVGQNEKKFTMYKFRSMVSnaeellenlldqneTTGAMFKMKNDPRITR  123
            + KGP+ FKQ R G ++K F +YKFRSM             Q+    A  ++     IT+
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSM------------RQDTPNVATDRLDPADYITK  78

Query  124  VGRFIRKTSIDELPQLINVLKGDMSLVGPRPPLLREVKEYSEYH--KKRL-----LVKPG  176
             G+FIRKTS+DELPQL+N+LKGDM++VGPRP+L      Y++Y+   KR      LVKPG
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL------YNQYELIEKRTNVNVHLVKPG  132

Query  177  CTGLWQISGRSNVGFEEMVELDLKYIKKNNIFFDIYIIFKTIKIMFGSTDA  227
             TGL Q+ GR N   ++ V+ D  Y+ ++++ +D+YII+KTIK  ++S + 
Sbjct  133  LTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

507) Veis_3055 in NC_008786


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 93.1 bits (334),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 61/145 (43%), Positives = 96/145 (67%), Gaps = 6/145 (4%)

Query  35   PVLFRQVRVGLHGREFRMYKFRSMVRQADRLGPHFTTGGDDPR--ITPVGRWLRRTSIDE  92
            P++F+Q R G+  + F++YKFRSM RQ     P+ +T+  DP   IT  G+ +R+TS+DE
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSM-RQD---TPNVATDRLDPADYITKTGKFIRKTSLDE  90

Query  93   LPQLLNVLKGDMSLVGPRPDLPVQRDLYTEAQWLARCSVRPGITGLAQALYRSEATHEQR  152
            LPQL+N+LKGDM++VGPRP L  Q +L      +    V+PG+TGLAQ + R + T++Q+
Sbjct  91   LPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQK  150

Query  153  LAADLRYAREMSLWLDLQIMLWSLR  177
            +  D  Y  + S+ LD+ I+  +++
Sbjct  151  VQYDKFYVENQSFKLDMYIIYKTIK  175

508) HBHAL_1970 in NC_017668


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 93.1 bits (334),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 69/167 (42%), Positives = 111/167 (67%), Gaps = 2/167 (1%)

Query  19   PVFVLISIILKVQIGSPIFFTQERPGLNDEPFYLYKFRTMSNRTDE-QGNLLSDEKRLTE  77
            P++ L+SI +K++  +PI F Q+RPG+++  F +YKFR+M + T +   + L     +T 
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITK  78

Query  78   VGAILRKYSLDEFPQLINVIKGDMSLVGprpllleylplytpeQSLR-NLVKPGITGWAQ  136
             G ++RK SLDE+PQL+N++KGDM++VGPRP L +   L     ++  +LVKPG+TG AQ
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQ  138

Query  137  INGRNAITWEEKFRCDTWYVKNWSLGLDIKILALTFSKVLKKEGISH  183
            + GR+  T ++K + D  YV N S+ LD+ I+  T+ + +  EG+SH
Sbjct  139  VMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

509) GU3_12800 in NC_016745


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 93.1 bits (334),  Expect = 9e-21, Method: Compositional matrix adjust.
 Identities = 67/155 (44%), Positives = 107/155 (70%), Gaps = 2/155 (1%)

Query  1    MIRLFDIVFSLLGLVCGFPVFVLLTLIGLFDTGSPI-FRQVRVGRHQQPFTLVKFRTMKV  59
            M R+FDI  SL +++  +P++ L+++   +++ +PI F+Q R G  ++ F + KFR+M+ 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  60   DTasvashlasass-ITPFGHFLRRTKLDELPQLWNVLKGEMSLVGPRPGLFNQEELTRA  118
            DT++VA++   ++  IT  G F+R+T LDELPQL N+LKG+M++VGPRP+L+NQ EL   
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  119  RAAHGVYDVRPGITGLAQVNEIDMSTPELLAETDK  153
            R+   V  V+PG+TGLAQV   D +T +   + DK
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDK  155

510) MS7_0120 in NC_017351


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 63/145 (44%), Positives = 101/145 (70%), Gaps = 15/145 (10%)

Query  2    GKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFI  61
             KL+KIYK+RSM +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +
Sbjct  47   NKLFKIYKFRSMRQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVV  105

Query  62   GPRPERPEFVELFSS-EVIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKY  115
            GPRP       L++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y
Sbjct  106  GPRPA------LYNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFY  157

Query  116  IHKGSLMMELYISIRTLMVVITGEG  140
            +++ S+ +++YI  +T+   I++EG
Sbjct  158  VENQSFKLDMYIIYKTIKNTISSEG  182

511) YBT020_08580 in NC_017200


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 67/165 (41%), Positives = 109/165 (67%), Gaps = 9/165 (5%)

Query  50   CIIILFETAGAPIYFQERLGMNGKRFNVFKLRSMVTDAEINGPQWADENDPRITKVGSFI  109
             I I +E+ G+ ++ Q+R G++ K F+++K+RSM  D+   + ++ D  D  ITK G FI
Sbjct  25   SIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPAD-YITKTGKFI  83

Query  110  RKTRIDELPQLFNILKGDMSFVGPRPEREYFYKQFDTYIPEFKDRL---IVKPGLTGWAQ  166
            RKT +DELPQLFNILKGDM+ VGPRP    +Y+Q++  + E +  +   +VKPGLTG AQ
Sbjct  84   RKTSLDELPQLFNILKGDMAVVGPRPA---LYNQYE--LIEKRTNVNVHLVKPGLTGLAQ  138

Query  167  INGGYNLDAKEKLKLDMEYIEMKTIRMDIRILCKTVLIVLNRNGA  211
            + G  N    +K++ D  Y+E +++++D+ I+ KT+   ++ +G 
Sbjct  139  VMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

512) D805_0347 in NC_020546


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 92.8 bits (333),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 70/173 (41%), Positives = 114/173 (66%), Gaps = 16/173 (9%)

Query  4    VAFRVHHEDGGPAIYKQQRIGLYGRPFTLYKFRSMRVNADKEDKKLAQEMGAEHGILFKP  63
            V++ +  E  GP ++KQ+R G+  + F +YKFRSMR ++         ++++++   + P
Sbjct  24   VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDT--------PNVATDR---LDP  72

Query  64   KDDPRITKFGRFIRKTSLDEFPQFFNVFKGDMSLVGPRPQ--QQYEVDEYNALYSTRLLV  121
             D   ITK G+FIRKTSLDE+PQ+FN++KGDM++VGPRP   +QYE+ E  +  + + LV
Sbjct  73   ADY--ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVH-LV  129

Query  122  KPGITGPWQVSGRSDLSQEESERLDVSYVENWSITGDIAILFKTVSAVLKGTG  174
            KPG+TG  QV GR + ++++  + D  YVEN S+  D+ I++KT+   + + G
Sbjct  130  KPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

513) GK3319 in NC_006510


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 92.3 bits (331),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 76/181 (42%), Positives = 112/181 (62%), Gaps = 26/181 (14%)

Query  30   KRIMDICGALIGLICLSWLFLIVALLIKLEDPKGPVFFKQVRVGKDGKEFYMYKFRSMva  89
            KRI DI ++L ++I +  L+++V++ IK+E +KGP+ FKQ R G   K F +YKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  90   naeellesllhlnevsGAMFKMKDDPRITKVGKFIRKTSIDELPQLWNVLKGDMSLVGPR  149
            ++ ++               ++     ITK GKFIRKTS+DELPQL N+LKGDM++VGPR
Sbjct  61   DTPNVATD------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  150  PPLPREVAQYTEYD--KQRL-----LVTPGCTGLWQVSGRNDLGFDEMVELDLKYIRERS  202
            P+L      Y +Y+   +R      LV PG TGL QV GR++   D+ V+ D  Y+ ++S
Sbjct  109  PAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQS  162

Query  203  L  203
            +
Sbjct  163  F  163

514) Bsph_0524 in NC_010382


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 92.3 bits (331),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 73/177 (42%), Positives = 110/177 (63%), Gaps = 32/177 (18%)

Query  39   VFLILLF--------TTGRPIFFKQIRTGLDHHRFVIWKLRTMCIQAVPINMPAICTNGI  90
            +FL LLF         +  PI FKQ R G+ +  F I K+R+M  ++     P + T+ +
Sbjct  16   IFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDT-----PNVATDRL  70

Query  91   -PDDYFFKVEQDTRITKVGAILRKLSIDEIPQLLNVLKGEMSIVGPRPEVPTITNAYNNL  149
             P DY         ITK G ++RK S+DE+PQL+N+LKG+M++VGPR   P++ N Y+ +
Sbjct  71   DPADY---------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR---PALYNQYELI  118

Query  150  QAR-----RLEVKPGLTGLAQINGRSNISHGQKISYDIEYVDHYSFWMDVQIVLKTL  201
            + R     +L VKPGLTGLAQ+ GR N +++QK+ YD  YV++ SF +D+ I+ KT+
Sbjct  119  EKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

515) Calni_0128 in NC_014758


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 92.0 bits (330),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 69/149 (47%), Positives = 105/149 (71%), Gaps = 10/149 (6%)

Query  7    KRLMDIIFSTL-AILLLLPSFFIIALLIKLDTNGPIFYRQIRMGKDFKPFGLYKFRTMVV  65
            KR+ DI FS+L AI+++LP +F++++ IK++++GPI ++Q R G   K F +YKFR+M  
Sbjct  2    KRIFDI-FSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DADKMGPLVTKDR-DPR--ITKVGYYLRKWKLDELPQFFNVLKGDMSLVGPRPEV-EKYV  121
            D+    P V+ DR DP   ITK G ++RK  LDELPQ+FN+LKGDM++VGPRP + ++Y 
Sbjct  61   DT----PNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYE  116

Query  122  KLYKDDYTIVLTVKPGITDYATILFRDEE  150
             + K     V  VKPG+T+ A ++ RD++
Sbjct  117  LIEKRTNVNVHLVKPGLTGLAQVMGRDNN  145

516) CKL_3161 in NC_009706


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 71/168 (43%), Positives = 106/168 (64%), Gaps = 13/168 (7%)

Query  50   VKLDSKGPAIFKQTRVGKDGKKFIIYKFRTMVVDADKKITLDIKPENLENFVFQSRNDSR  109
            +K++SKGP +FKQ R G   K F IYKFR+M     ++ T ++  + L+   +       
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSM-----RQDTPNVATDRLDPADY-------  75

Query  110  ITKSGAFLRKTSLDEIPQLFNVLFGNMSLVGPRPEIPDVVKFYPEAYRQRL-LVTPGITG  168
            ITK+G F+RKTSLDE+PQLFN+L G+M++VGPRP + +   +        + LV PG+TG
Sbjct  76   ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTG  135

Query  169  LAQVSGRGEIELGKTVYYDLTYIKNFSLWTDIKILFKTIFSVFKSEGA  216
            LAQV GR++   ++ V YD  Y+ N S+  D+ I++KTI + + SEG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

517) CKR_2799 in NC_011837


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 71/168 (43%), Positives = 106/168 (64%), Gaps = 13/168 (7%)

Query  50   VKLDSKGPAIFKQTRVGKDGKKFIIYKFRTMVVDADKKITLDIKPENLENFVFQSRNDSR  109
            +K++SKGP +FKQ R G   K F IYKFR+M     ++ T ++  + L+   +       
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSM-----RQDTPNVATDRLDPADY-------  75

Query  110  ITKSGAFLRKTSLDEIPQLFNVLFGNMSLVGPRPEIPDVVKFYPEAYRQRL-LVTPGITG  168
            ITK+G F+RKTSLDE+PQLFN+L G+M++VGPRP + +   +        + LV PG+TG
Sbjct  76   ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTG  135

Query  169  LAQVSGRGEIELGKTVYYDLTYIKNFSLWTDIKILFKTIFSVFKSEGA  216
            LAQV GR++   ++ V YD  Y+ N S+  D+ I++KTI + + SEG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

518) B1NLA3E_20075 in NC_021171


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.8 bits (329),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 74/181 (41%), Positives = 118/181 (66%), Gaps = 26/181 (14%)

Query  31   IKRLIDLIFSLFGIIFLMPLFIIVSLLIKLEDPNGSVFFKQIRVGKNGKEFYIYKFRTMV  90
            +KR++D++ SL++II+++PL+++VS+ IK+E ++G++ FKQ R G + K F IYKFR+M 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIE-SKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  91   IDAEKQLEDLFKYNEVNGLMFKMKEDPRITKIGKFLRNTSLDEFPQLFNVLKGEMSLVGP  150
             D+ +   D            ++     ITK GKF+R+TSLDE+PQLFN+LKG+M++VGP
Sbjct  60   QDTPNVATD------------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGP  107

Query  151  RPPLPREVKEYTNYH----KQRLYVL---PGCTGLWQVTSRNNVGFEEMVMLDLEYIEKR  203
            RP+L      Y +Y+    +  + V    PG TGL QV +R+N   ++ V  D  Y+E++
Sbjct  108  RPAL------YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQ  161

Query  204  S  204
            S
Sbjct  162  S  162

519) sync_0183 in NC_008319


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.5 bits (328),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 68/166 (41%), Positives = 106/166 (64%), Gaps = 1/166 (0%)

Query  1    MIRIADLVLSLILLMVAIPLLAVATFLISVESRGWPVFSQVRIGKYGKEFIIYKLRTMYV  60
            M RI D+  SL  +++ +PLL + ++ I +ES+G  VF Q R G   K F IYK+R+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   NASKDGNFATKKGDKRITRVGGFLRATSIDELPQLINVIRGDMSFVGPRPDVPTQKEMYT  120
            ++++ +          IT+ G F+R TS+DELPQL+N+++GDM+ VGPRP +  Q E+  
Sbjct  61   DTPNVAT-DRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  121  EREFIFRHSVQPGITGLAQIRGRSGATHEIRLKNDCEWVEKRSFTL  166
             R  +  H V+PG+TGLAQ+ GR   T++ +++ D   VE++SF L
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKL  165

520) RA0C_0984 in NC_017045


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 74/176 (43%), Positives = 125/176 (72%), Gaps = 2/176 (1%)

Query  15   ALVGFLLLSPVFILVTIGLFFANQGKPFFFQKRPGKNERIFSIIKFKTM-NDKKDANGNL  73
            +L +++++ P+++LV+I++ + ++G   F Q RPG ++++F I KF++M +D  +   + 
Sbjct  10   SLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDR  69

Query  74   LSDAERLTAIGKFVRKTSLDEIPQLLNVIKGDMSLVGprpllpqylplyNEEQK-KRHNV  132
            L  A+ +T  GKF+RKTSLDE+PQL+N++KGDM++VGPRP L +   L +   + + H V
Sbjct  70   LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLV  129

Query  133  RPGITGWAQVNGRNAISWQQKFEYDVWYVENislsldikilllTVKKVFVSEGISQ  188
            +PG+TG AQV GR+  + +QK +YD  YVEN S+ LD+ I+  T+K+ + SEG+S+
Sbjct  130  KPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

521) Riean_0747 in NC_014738


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 74/176 (43%), Positives = 125/176 (72%), Gaps = 2/176 (1%)

Query  15   ALVGFLLLSPVFILVTIGLFFANQGKPFFFQKRPGKNERIFSIIKFKTM-NDKKDANGNL  73
            +L +++++ P+++LV+I++ + ++G   F Q RPG ++++F I KF++M +D  +   + 
Sbjct  10   SLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDR  69

Query  74   LSDAERLTAIGKFVRKTSLDEIPQLLNVIKGDMSLVGprpllpqylplyNEEQK-KRHNV  132
            L  A+ +T  GKF+RKTSLDE+PQL+N++KGDM++VGPRP L +   L +   + + H V
Sbjct  70   LDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLV  129

Query  133  RPGITGWAQVNGRNAISWQQKFEYDVWYVENislsldikilllTVKKVFVSEGISQ  188
            +PG+TG AQV GR+  + +QK +YD  YVEN S+ LD+ I+  T+K+ + SEG+S+
Sbjct  130  KPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVSH  185

522) ECBG_01726 in NC_020995


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 68/165 (42%), Positives = 108/165 (66%), Gaps = 16/165 (9%)

Query  43   ICIGIKFSNWQAPIIFKQVRVGKNETTFVMYKFRTMVPDADQLLGQYLDKNEIEGAMFKL  102
            + I+IK  + ++PI+FKQ R G ++  F +YKFR+M  D+ ++  + LD  +        
Sbjct  24   VSIAIK-IESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY-------  75

Query  103  KKDPRVTRLGRLLRKTSLDELPQLINVLKGEMALVGPRPPL--EREVVSYSEKDKQRLSV  160
                 +T+ G+++RKTSLDELPQL+N+LKG+MA+VGPRP+L  + E++    + + +L V
Sbjct  76   -----ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHL-V  129

Query  161  TPGCTGLWQVSGRNELSFQEMVALDLYYINNLSWLLDLKIIMKTI  205
             PG TGL QV GR++ + ++ V  D +Y++N S  LD+ II KTI
Sbjct  130  KPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTI  174

523) LRHM_1964 in NC_017482


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 70/168 (42%), Positives = 99/168 (59%), Gaps = 18/168 (10%)

Query  60   NKGPLFFKQTRVGRHGDRFKIYKFRSMVVDAEGVLHRDSALYKKYVANNYKLPVGEDPRI  119
            +KGP+ FKQ R G     FKIYKFRSM  D+  V         +  + +Y         I
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVAT------DRLDPADY---------I  76

Query  120  TRLGAFIRKSSLDELPQFINILKGDMSMVGPRPVI--EDELAEYGDHVNELLEAKPGAMG  177
            T+ G FIRK+SLDELPQ++NILKGDM++VGPRP +  + EL E   +VN  L  KPG  G
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHL-VKPGLTG  135

Query  178  LWQASGRSNIGYPERADLELYYIRHRSFHYDLIILFKNIASIFKAEGA  225
            L Q  GR N    ++ + + +Y+ ++SF  D+ I++K I + + +EG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

524) welE in NC_013198


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 70/168 (42%), Positives = 99/168 (59%), Gaps = 18/168 (10%)

Query  60   NKGPLFFKQTRVGRHGDRFKIYKFRSMVVDAEGVLHRDSALYKKYVANNYKLPVGEDPRI  119
            +KGP+ FKQ R G     FKIYKFRSM  D+  V         +  + +Y         I
Sbjct  32   SKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVAT------DRLDPADY---------I  76

Query  120  TRLGAFIRKSSLDELPQFINILKGDMSMVGPRPVI--EDELAEYGDHVNELLEAKPGAMG  177
            T+ G FIRK+SLDELPQ++NILKGDM++VGPRP +  + EL E   +VN  L  KPG  G
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHL-VKPGLTG  135

Query  178  LWQASGRSNIGYPERADLELYYIRHRSFHYDLIILFKNIASIFKAEGA  225
            L Q  GR N    ++ + + +Y+ ++SF  D+ I++K I + + +EG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

525) Mesop_5467 in NC_015675


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.2 bits (327),  Expect = 3e-20, Method: Compositional matrix adjust.
 Identities = 57/141 (41%), Positives = 89/141 (64%), Gaps = 1/141 (0%)

Query  37   GPAIFSQTRVGRGGVPFRCHKLRTMYQGTPSLPSHE-APEGAVTSVGRVLRKFKLDELPQ  95
            GP +F Q R G     F+  K+R+M Q+TP+++++   P + +T  G+ +RK  LDELPQ
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  96   FWNVLQGEMSLVGPRPCLPTQTELIECRRRLGVLEALPGITGLAQIRGIDMSNPHLLAET  155
            + N+L+G+M++VGPRP L  Q ELIE R  + V    PG+TGLAQ+ G D +  +   + 
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  156  DAAYLRTASLWLDLRILFGTL  176
            D  Y+   S+ LD+ I++ T+
Sbjct  154  DKFYVENQSFKLDMYIIYKTI  174

526) BTG_22035 in NC_018500


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.0 bits (326),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 70/167 (42%), Positives = 117/167 (71%), Gaps = 5/167 (2%)

Query  36   LLDVMFSLVGLILLMPVilifsiliilESPGSPFYLQERLGLNGKRFKVIKLRSMRNDAE  95
            ++D+  SL ++I+++P++++ SI I +ES G+  + Q+R G++ K FK+ K+RSMR+D+ 
Sbjct  4    IFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP  63

Query  96   KNGAKWAEKNDPRVTKIGLFIRKTRIDELPQLFNILKGDMSLVGPRPERPIFTE-KFERD  154
            + ++ + +  D  +TK G FIRKT +DELPQLFNILKGDM++VGPRP  +++ +  +   
Sbjct  64   NVATDRLDPAD-YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYNQYELIEK  120

Query  155  IPGFKKRLEVKPGLTGWAQVNGGYEITPKEKLNLDVYYINHASIILD  201
                + +L VKPGLTG AQV G  + T  +K++ D +Y+++ S+ LD
Sbjct  121  RTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLD  166

527) BTF1_24740 in NC_018508


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.0 bits (326),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 70/167 (42%), Positives = 117/167 (71%), Gaps = 5/167 (2%)

Query  36   LLDVMFSLVGLILLMPVilifsiliilESPGSPFYLQERLGLNGKRFKVIKLRSMRNDAE  95
            ++D+  SL ++I+++P++++ SI I +ES G+  + Q+R G++ K FK+ K+RSMR+D+ 
Sbjct  4    IFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP  63

Query  96   KNGAKWAEKNDPRVTKIGLFIRKTRIDELPQLFNILKGDMSLVGPRPERPIFTE-KFERD  154
            + ++ + +  D  +TK G FIRKT +DELPQLFNILKGDM++VGPRP  +++ +  +   
Sbjct  64   NVATDRLDPAD-YITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYNQYELIEK  120

Query  155  IPGFKKRLEVKPGLTGWAQVNGGYEITPKEKLNLDVYYINHASIILD  201
                + +L VKPGLTG AQV G  + T  +K++ D +Y+++ S+ LD
Sbjct  121  RTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLD  166

528) Cycma_0366 in NC_015914


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 91.0 bits (326),  Expect = 4e-20, Method: Compositional matrix adjust.
 Identities = 76/182 (42%), Positives = 112/182 (62%), Gaps = 8/182 (4%)

Query  44   LKRTFDVTLSIVLTVLIFSWLFPLIGLLIKLTSSGPVFFQQLRHGKDNVPFYCYKFRTMY  103
            +KR FD+ +S + +++IF  L+ L+++ IK+ S GP+ F+Q R G  N  F  YKFR+M 
Sbjct  1    MKRIFDI-FSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR  59

Query  104  VNDQADTKQATKDDPRITWIGKFLRKSSLDELPQFFNVIKGEMSIVGPRPHAMPMNYKFS  163
             +    + +       IT  GKF+RK+SLDELPQ+FN++KG+M++VGPRP A+  +Y + 
Sbjct  60   QDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP-ALYNQYELI  118

Query  164  AEIDNFMFRHTVKPGITGLAQAKGFRGETKDFYDIYSRCKLDIFYVKNWSPILDIKIIIW  223
                N +  H VKPG+TGLAQ  G   +T D      + + D FYV N S  LD+ II  
Sbjct  119  EKRTN-VNVHLVKPGLTGLAQVMGRDNNTDD-----QKVQYDKFYVENQSFKLDMYIIYK  172

Query  224  TV  225
            T+
Sbjct  173  TI  174

529) Ornrh_0868 in NC_018016


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 90.5 bits (324),  Expect = 5e-20, Method: Compositional matrix adjust.
 Identities = 69/157 (44%), Positives = 107/157 (69%), Gaps = 2/157 (1%)

Query  33   LSIANHGSPFFFQRRPGLNEKIFSIVKFKTM-NDKKDAQGNLLPDADRLTSVGKFVRKTS  91
            + I + G+  F Q RPG+++K+F I KF++M +D  +   + L  AD +T  GKF+RKTS
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTS  87

Query  92   LDEIPQLINVLKGDMSLIGprpllpeylplyneeQK-KRHSVRPGITGWAQVNGRNAISW  150
            LDE+PQL+N+LKGDM+++GPRP L +   L +   + + H V+PG+TG AQV GR+  + 
Sbjct  88   LDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

Query  151  NEKFKLDVWYVKNLSLTLDTKILFLTIKKVFKSEGIN  187
            ++K + D  YV N S+ LD  I++ TIK+ + SEG++
Sbjct  148  DQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

530) CPS_0590 in NC_003910


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 90.5 bits (324),  Expect = 6e-20, Method: Compositional matrix adjust.
 Identities = 65/143 (46%), Positives = 102/143 (72%), Gaps = 6/143 (4%)

Query  12   IFSFFGLLFAC----PFLIILTIIGYFDTGSPI-FIQERVGRNKKPFNLIKFRTMTVGTa  66
            IF +F+ L+A     P+L++++I   +++ +PI F Q+R G ++K F++ KFR+M  +T+
Sbjct  4    IFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTP  63

Query  67   svashlassas-ITNFGSFLRKTKLDELPQLWNVLKGEMSLVGPRPNLFNQTELVLERES  125
            +VA++   +A  IT+ G F+RKT LDELPQL N+LKG+M++VGPRP L+NQ EL+  R +
Sbjct  64   NVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTN  123

Query  126  RGVYNVRPGVTGLSQVNEIDMST  148
              V  V+PG+TGL+QV   D +T
Sbjct  124  VNVHLVKPGLTGLAQVMGRDNNT  146

531) CbC4_1010 in NC_015425


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 90.2 bits (323),  Expect = 7e-20, Method: Compositional matrix adjust.
 Identities = 69/167 (42%), Positives = 102/167 (62%), Gaps = 13/167 (7%)

Query  51   KVDSKGPAIFKQVRAGKDNVPFKIYKFRTMVVNAEKKRSLEIETQDIENFVFQSKSDNRI  110
            K++SKGP +FKQ R+G  N  FKIYKFR+M    +   ++  +  D  ++         I
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADY---------I  76

Query  111  TKVGAFLRKTSLDELPQLFNVLIGNMSLVGPRPEIPDVVKFYPPEYAQRL-LVLPGITGL  169
            TK G F+RKTSLDELPQLFN+L G+M++VGPRP + +   +        + LV PG+TGL
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  170  AQISGRGEIELGKTVYFDLTYIKNFSVGYDMKILFKTVLSVFKREGA  216
            AQ+ GR++   ++ V +D  Y+ N S   DM I++KT+ + +  EG 
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

532) M892_02260 in NC_022269


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 89.7 bits (321),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 71/170 (42%), Positives = 103/170 (61%), Gaps = 16/170 (9%)

Query  27   KRAFDVVISLLILLATMPLMPMIALVIVVNSKGPVIYRQLRVGRCTPEKMDLFEIMKFRT  86
            KR FD+  SL  ++  +PL+ ++++ I ++SKGP++++Q R G     K  LF I KFR+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRS  57

Query  87   MYIDAEQRSGAVWASENDPR--ITPVGRFLRKTRLDELPQLFNVLKGEMSLIGPRPERPA  144
            M     Q +  V +   DP   IT  G+F+RKT LDELPQLFN+LKG+M+++GPRP    
Sbjct  58   M----RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN  113

Query  145  FYQKLEDEIPYFVERTYGVLPGITGLAQVNQGYDSSIEDVRRKVGYDHSY  194
             Y+ +E            V PG+TGLAQV  G D++ +D  +KV YD  Y
Sbjct  114  QYELIEKRTN---VNVHLVKPGLTGLAQV-MGRDNNTDD--QKVQYDKFY  157

533) VIBHAR_02218 in NC_009783


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 89.7 bits (321),  Expect = 8e-20, Method: Compositional matrix adjust.
 Identities = 71/170 (42%), Positives = 103/170 (61%), Gaps = 16/170 (9%)

Query  27   KRAFDVVISLLILLATMPLMPMIALVIVVNSKGPVIYRQLRVGRCTPEKMDLFEIMKFRT  86
            KR FD+  SL  ++  +PL+ ++++ I ++SKGP++++Q R G     K  LF I KFR+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRS  57

Query  87   MYIDAEQRSGAVWASENDPR--ITPVGRFLRKTRLDELPQLFNVLKGEMSLIGPRPERPA  144
            M     Q +  V +   DP   IT  G+F+RKT LDELPQLFN+LKG+M+++GPRP    
Sbjct  58   M----RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN  113

Query  145  FYQKLEDEIPYFVERTYGVLPGITGLAQVNQGYDSSIEDVRRKVGYDHSY  194
             Y+ +E            V PG+TGLAQV  G D++ +D  +KV YD  Y
Sbjct  114  QYELIEKRTN---VNVHLVKPGLTGLAQV-MGRDNNTDD--QKVQYDKFY  157

534) cps2E in NC_021235


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 89.7 bits (321),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 67/164 (41%), Positives = 107/164 (66%), Gaps = 14/164 (8%)

Query  70   KLTSKGPIFFKQERVGYKGKTFDVIKLRSMRNDAEAKTGAVWAQKNDPR--VTAVGRFMR  127
            K+ SKGPI FKQ+R G K K F + K+RSMR+D    T  V +++ DP   +T  G+F+R
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD----TPNVATDRLDPADYITKTGKFIR  84

Query  128  KTRIDELPQFWNVLKGDMSMIGPRP---ERPELTERFYKQWPEFPQRLRIIPGLTGYAQI  184
            KT +DELPQ+ N+LKGDM+++GPRP   ++ EL E+    + +   +L + PGLTG AQ+
Sbjct  85   KTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK----RTNVNVHL-VKPGLTGLAQV  139

Query  185  HGGYDLKPNEKCKLDNYYIEHYSLWQDCKIAFETFKIIFTGDGA  228
             G  +   ++K + D++Y+E+ S+  D  I + T+K  ++++G 
Sbjct  140  MGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

535) VEA_003543 in NC_013456


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 89.7 bits (321),  Expect = 9e-20, Method: Compositional matrix adjust.
 Identities = 70/171 (41%), Positives = 105/171 (62%), Gaps = 16/171 (9%)

Query  14   KRTFDVLVAMFILLVTAPLFPFIALAIKITSKGPVIYRQLRVGRCTPEKMDLFQIMKFRT  73
            KR FD++ +++ +++  PL+ ++++AIKI SKGP++++Q R G     K  LF+I KFR+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRS  57

Query  74   MYIDAEQRSGAVWATENDPR--ITPIGRFLRKTRLDELPQLFNVLRGEMSMIGPRPERPA  131
            M     Q +  V +   DP   IT  G+F+RKT LDELPQLFN+L+G+M+++GPRP    
Sbjct  58   M----RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN  113

Query  132  FYQKLEDEIPYFVERTYGVLPGITGLAQVNQGYDACIEDVRRKVGFDHSYA  182
             Y+ +E            V PG+TGLAQV  G D   +D  +KV +D  Y 
Sbjct  114  QYELIEKRTN---VNVHLVKPGLTGLAQV-MGRDNNTDD--QKVQYDKFYV  158

536) wcaJ in NC_008255


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 89.4 bits (320),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 10/157 (6%)

Query  26   LFLLISIVNYALYKNVFFIQERTGLHMKPFQLIKFQTMRTIQDEHGVPLADMKR---VTG  82
            LFL+   ++      + F Q+R G+  K F++ KF++MR  QD   V+   +     +T 
Sbjct  21   LFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMR--QDTPNVATDRLDPADYITK  78

Query  83   FGKLLRITSIDELPQLFLVLTGKMSLVGPRPLPVSYDCYYTEEQRLRFEA---KPGITGL  139
             GK++R TS+DELPQLF +L G M++VGPRP    Y+ Y   E+R   +    KPG+TGL
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRP--ALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  140  AQVNGRNATSWESRFQFDSMYIKNRSFRLDMLILAKT  176
            AQV GR+  + + + Q+D  Y+ N+SF+LDM I+ KT
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

537) K210_05660 in NC_021354


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 89.1 bits (319),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 100/150 (67%), Gaps = 2/150 (1%)

Query  46   PILFKQERTGKNGKIFTMYKFRTMR-NSFDESGEFLSDDERMTTFGSKLRSLSLDELPEL  104
            PI+FKQ+R G + K+F +YKFR+MR ++ + + + L   + +T  G  +R  SLDELP+L
Sbjct  35   PIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQL  94

Query  105  FNILKGDMSVIGprpllpky-lprySKEQYKRHDVKPGLTGLAQVNGRNAISWEKRFEFD  163
            FNILKGDM+V+GPRP L +       + + + H VKPGLTGLAQV GR+  + +++ ++D
Sbjct  95   FNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYD  154

Query  164  VEYTEKVSFFYDLKSFFMTIKTVLVREGIS  193
              Y E+ SF  D+  ++ TIK  +  EG+S
Sbjct  155  KFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

538) GHH_c34090 in NC_020210


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 89.1 bits (319),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 82/190 (44%), Positives = 125/190 (66%), Gaps = 19/190 (10%)

Query  36   KRTIDIVGAIIGLVLTSPLFLLISIFYLFGESKGPIFFKQVRVGKNGKRFYIYKFRSMIV  95
            KR +DI +++ ++++  PL++L+SI   + ESKGPI FKQ R G + K F IYKFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKI-ESKGPIVFKQDRPGVKNKLFKIYKFRSM--  58

Query  96   NAEEKLKADKELYEKYLRNNYKLEPHEDPRITNLGRFLRKTSLDEIPQLINVLKGEMSLV  155
              ++  +   +          +L+P +   IT+ G+F+RKTSLDE+PQL+N+LKG+M++V
Sbjct  59   -RQDTPNVATD----------RLDPADY--ITKTGKFIRKTSLDELPQLFNILKGDMAVV  105

Query  156  GPRPVV--EEELKEYGMEVSKFLSVKPGITGYWQVSGRSEVGYPERVDVELFYVYNQSLF  213
            GPRP +  + EL E   +V+  L VKPG+TG  QV GR +    ++V+ + FYV NQS+ 
Sbjct  106  GPRPALYNQYELIEKRTNVNVHL-VKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFK  164

Query  214  LDIVILVKTV  223
            LD+ I+ KT+
Sbjct  165  LDMYIIYKTI  174

539) KUM_0481 in NC_021033


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 88.6 bits (317),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 80/189 (43%), Positives = 129/189 (69%), Gaps = 14/189 (7%)

Query  7    KRILDIIGALVLLIFTSPVLLFITILLFFANNGKPFFIQSRPGknkkifkilkfkTMRDD  66
            KRI+DI+++L  +I+  P+L++++I + + ++G   F Q RPG ++K+FKI KF++MR+D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  67   FDE-RGNLLPDQKRLTVIGKFVRKTSLDELPQLINVLIGDMSFVGPRPLLIEYIPLYSKF  125
              +   + L     +T  GKF+RKTSLDELPQL+N+L GDM+ VGPRP      +LY+++
Sbjct  62   TPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP------ALYNQY  115

Query  126  Q--SRR-----HEVRPGITGWAQVNGRNAISWEEKFKLDVWYVDNYSLSLDIKILYLTFL  178
            +   +R     H V+PG+TG AQV GR+  + ++K + D  YV+N S+ LD+ I+Y T+ 
Sbjct  116  ELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIK  175

Query  179  KVLKSEGIS  187
            + + SEG+S
Sbjct  176  NTISSEGVS  184

540) BF638R_1092 in NC_016776


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 88.4 bits (316),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 65/147 (45%), Positives = 98/147 (67%), Gaps = 2/147 (1%)

Query  44   FLQERPGRHGKIFKVIKFKTMTDE-RDAEGNLLPDDKRLTKVGKFVRSTSIDELPQLINV  102
            F Q+RPG   K+FK+ KF++M ++  +   + L     +TK GKF+R TS+DELPQL+N+
Sbjct  38   FKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNI  97

Query  103  LKGDMSFIGprpllpqylplyNK-EQARRHEVRPGITGWAQVNGRNAISWVRKFELDVWY  161
            LKGDM+ +GPRP L +   L +K  +   H V+PG+TG AQV GR+  +  +K + D  Y
Sbjct  98   LKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFY  157

Query  162  VDHCSFFLDLKIFFLTIKKVFVREGIS  188
            V++ SF LD+ I++ TIK+ +  EG+S
Sbjct  158  VENQSFKLDMYIIYKTIKNTISSEGVS  184

541) BF1110 in NC_006347


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 88.4 bits (316),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 65/147 (45%), Positives = 98/147 (67%), Gaps = 2/147 (1%)

Query  44   FLQERPGRHGKIFKVIKFKTMTDE-RDAEGNLLPDDKRLTKVGKFVRSTSIDELPQLINV  102
            F Q+RPG   K+FK+ KF++M ++  +   + L     +TK GKF+R TS+DELPQL+N+
Sbjct  38   FKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNI  97

Query  103  LKGDMSFIGprpllpqylplyNK-EQARRHEVRPGITGWAQVNGRNAISWVRKFELDVWY  161
            LKGDM+ +GPRP L +   L +K  +   H V+PG+TG AQV GR+  +  +K + D  Y
Sbjct  98   LKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFY  157

Query  162  VDHCSFFLDLKIFFLTIKKVFVREGIS  188
            V++ SF LD+ I++ TIK+ +  EG+S
Sbjct  158  VENQSFKLDMYIIYKTIKNTISSEGVS  184

542) FMG_0581 in NC_010376


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 88.4 bits (316),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 70/162 (44%), Positives = 115/162 (71%), Gaps = 3/162 (1%)

Query  18   IKRLFDILASLFGilvmaipmiiisiaiKLDSKGPVFFKQKRVKKNNKDFTILKFRTMVV  77
            +KR+FDI++SL++I++    ++++SIAIK++SKGP+ FKQ R   +NK F I KFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  78   DAPKLGMAITVGDDPRITKVGKFLRKTKLDEFPQLFNVLIGDMSFVGPRPEV-RKYVDLY  136
            D+P+++    ++    ITK GKF+RKT LDE+PQLFN+L GDM+ VGPRP +  +Y  + 
Sbjct  61   DTPNVATD-RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIE  119

Query  137  SDSDRDILKIRPGITDLASIKYRDESEILDKSDNPEKTYVEE  178
              ++ ++  ++PG+T+LA +  RD++   +K +  +K YVE+
Sbjct  120  KRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY-DKFYVEN  160

543) SPISAL_08120 in NC_021291


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 88.4 bits (316),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 56/134 (42%), Positives = 82/134 (62%), Gaps = 3/134 (2%)

Query  37   YRQLRVGRHREPFVLIKFRTMRPGTPSVATH-LADQTAITRGGQILRRTKLDELPQLWNV  95
            ++Q R G     F + KFR+MR +TP+VAT+ L     IT+ G+++R+T LDELPQL N+
Sbjct  38   FKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNI  97

Query  96   LKGDMSLVGPRPCLPSQHALIAERVARGVFSERPGITGFGQIAGVDMSDPVTLAQKDAAL  155
            LKGDM++VGPRP L +Q  LI  R    V   +PG+TG++Q+ G D +      Q D   
Sbjct  98   LKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFY  157

Query  156  V--RDLRLKTYVRC  167
            V  + ++L  Y+  
Sbjct  158  VENQSFKLDMYIIY  171

544) NT01CX_1797 in NC_008593


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 88.1 bits (315),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 68/167 (41%), Positives = 102/167 (62%), Gaps = 13/167 (7%)

Query  51   KVDSKGPAIFKQVRVGKDNKNFKIFKFRTMVVNAEKKRELNIENVDIENFVFQSKSDNRI  110
            K++SKGP +FKQ R G  NK FKI+KFR+M    +   ++  + +D  ++         I
Sbjct  29   KIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADY---------I  76

Query  111  TKVGAFLRKTSLDELPQLFNVLMGDMSLVGPRPEIPDVVKFYPPEYAQRL-LVLPGITGL  169
            TK G F+RKTSLDELPQLFN+L GDM++VGPRP + +   +        + LV PG+TGL
Sbjct  77   TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGL  136

Query  170  AQISGRGEIELGKTVYFDLTYIKKFSVGYDIEILIKTVLSVFKREGA  216
            AQ+ GR++   ++ V +D  Y+ + S   D+ I+ KT+ + +  EG 
Sbjct  137  AQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

545) cpsE3 in NC_020291


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 88.1 bits (315),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 63/155 (41%), Positives = 101/155 (66%), Gaps = 13/155 (8%)

Query  53   ESKGPVIFSQERIGVNGRKFKMYKFRSMIVDAEKYKEKLLKQNEMNGPMFKIKNDPRVTR  112
            ESKGP++F Q+R GV+ + FK+YKFRSM            +Q+  N +  ++     +T+
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSM------------RQDTPNVATDRLDPADYITK  78

Query  113  IGKFIRRTSIDELPQLLNILKGDMSLVGPRPSLPKEVEKFSPWMLERLK-VKPGLTCYWQ  171
             GKFIR+TS+DELPQL+NILKGDM++VGPRP+L ++ E +  +    +  VKPGLT   Q
Sbjct  79   TGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQ  138

Query  172  ISGRNDIQFEDWMKLDIKYVKERGTLLDIKLVIRT  206
            + GR++   ++ ++ D  YV +++  LD+ ++ +T
Sbjct  139  VMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

546) CLM_3499 in NC_012563


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 87.6 bits (313),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 78/179 (44%), Positives = 114/179 (64%), Gaps = 17/179 (9%)

Query  42   IYL-ILFL---WIKLDSKGPALFKQVRVGKDNKDFVIYKFRTMIVdaekkkkidleiedi  97
            I+L +LFL    IK++SKGP +FKQ R G  NK F IYKFR+M  D+ +           
Sbjct  16   IFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATD-------  68

Query  98   SSFVFQSKSDNRITKTGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYN  157
                 +  + + ITKTGKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      +  N
Sbjct  69   -----RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTN  123

Query  158  QRL-LVAPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSIWYDIKILFQTVFKVFKNEG  215
              + LV PG+TGLAQV GR++   ++ V YD  Y+ N S+  D+ I+++T+ + + +EG
Sbjct  124  VNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

547) Marme_0732 in NC_015276


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 87.3 bits (312),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 80/180 (45%), Positives = 108/180 (60%), Gaps = 25/180 (13%)

Query  60   VMLAIKLESKGPIFFSQVRIGLANKNASSLFKMVKFRTMVQNAESATGPVWASKNDARIT  119
            V +AIK+ESKGPI F Q R G+ NK    LFK+ KFR+M Q++ + +     +     IT
Sbjct  24   VSIAIKIESKGPIVFKQDRPGVKNK----LFKIYKFRSMRQDTPNVATDRLDP--ADYIT  77

Query  120  KVGKFMRKTRIDELPQLFNVLKGEMSMIGPRPERPGIMGKLENQIPLFNERTYG----VL  175
            K GKF+RKT +DELPQLFN+LKG+M+++GPRP        L NQ  L++ RT      V 
Sbjct  78   KTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA-------LYNQYELIEKRTNVNVHLVK  130

Query  176  PGITGLAQVYQGYDETIEDSRNKLGYDLSYSVALTSMKQWLFMDALIVWKTIVVVIMGRG  235
            PG+TGLAQV  G D+  +D  +K+ YD  + V   S K    +D  I+ KTI   I + G
Sbjct  131  PGLTGLAQV-MGRDNNTDD--QKVQYD-KFYVENQSFK----LDMYIIYKTIKNTISSEG  182

548) Riv7116_3145 in NC_019678


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 87.3 bits (312),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 66/157 (43%), Positives = 105/157 (67%), Gaps = 13/157 (8%)

Query  27   KRLLDILGSMVGLVI-LAIVFLPVAIAIKINSPGPIFFTQERYGLYGNTFRIRKFRSMVS  85
            KR++DI++S+ +++I L+++FL V+IAIKI+S GPI F Q+R G+  + F+I KFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFL-VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  86   DAEQLKSQVQNEANGHFFKSKNDFRVTKVGRFLRSTSLDELPQFWNVFSGEMSLVGTRPP  145
            D+ ++ ++  + A         D+ +TK G+F+R TSLDELPQ+ N++ G+M++VG RP+
Sbjct  61   DTPNVATDRLDPA---------DY-ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA  110

Query  146  TADEVMHYSEHHWQRLH-VKPGLTGEWQVNGRSHIKD  181
              ++      +    +H VKPGLTG  QV GR +  D
Sbjct  111  LYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD  147

549) pssAc in NC_010997


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 87.3 bits (312),  Expect = 5e-19, Method: Compositional matrix adjust.
 Identities = 80/193 (42%), Positives = 125/193 (65%), Gaps = 26/193 (13%)

Query  47   LKRLFDVYvslialiilsplliviavliRLESRGSPMFSQTRWGKDGKKITVYKFRSMLS  106
            +KR+FD++ SL A+II+ PLL+++++ I++ES+G+ +F Q R G   K + +YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  107  EACDPSGVIQTVENDARVTVLGRILRKTNLDELPQLFNVLRGDMSLVGPRCHAIGMLAGG  166
            ++  P+   + ++    +T  G+++RKT+LDELPQLFN+L+GDM++VGPR          
Sbjct  61   DT--PNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA--------  110

Query  167  MLYE--ELVPAYHRR-----HSMRPGLTGLAQMRGLRGPTDRVAKARARINADLYYIENF  219
             LY+  EL+   ++R     H ++PGLTGLAQ+ G    TD       +++ D +Y+EN 
Sbjct  111  -LYNQYELI---EKRTNVNVHLVKPGLTGLAQVMGRDNNTD-----DQKVQYDKFYVENQ  161

Query  220  SFWLDMKIIAGTI  232
            SF LDM II  TI
Sbjct  162  SFKLDMYIIYKTI  174

550) VP0231 in NC_004603


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 87.0 bits (311),  Expect = 6e-19, Method: Compositional matrix adjust.
 Identities = 61/151 (41%), Positives = 99/151 (66%), Gaps = 2/151 (1%)

Query  35   SPVLFRQTRPGLNGKPFEMVKFRTMK-DAVDEQGNLLPDSDRMTPFGEKLRNSSLDELPG  93
            +P++F+Q RPG++ K F + KFR+M+ D+ +   + L  +D +T  G  +R++SLDELP 
Sbjct  34   GPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQ  93

Query  94   LWSVLKGDMSLVGprpllmrylplyNE-EQARRHDARPGVTGWAQINGRNAISWEEKFAL  152
            L ++LKGDM++VGPRP L     L +   +   H  +PG+TG AQ+ GR+  + ++K   
Sbjct  94   LFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQY  153

Query  153  DVWYVDNQTFWLDIKILLLTVKKVFVKEGIS  183
            D  YV+NQ+F LD+ I+  T+K+ +  EG+S
Sbjct  154  DKFYVENQSFKLDMYIIYKTIKNTISSEGVS  184

551) CLD_1447 in NC_010516


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.3 bits (308),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 76/175 (44%), Positives = 111/175 (64%), Gaps = 16/175 (9%)

Query  45   ILFL---WIKLDSKGPALFKQVRVGKDNKDFVIYKFRTMIVdaekkkkidleiediSNFV  101
            +LFL    IK++SKGP +FKQ R G  NK F IYKFR+M    +   ++  +  D +++ 
Sbjct  20   LLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADY-  75

Query  102  FQSKSDNRITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL-  160
                    ITK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      K  N  + 
Sbjct  76   --------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVH  127

Query  161  LVTPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEG  215
            LV PG+TGLAQV GR++   ++ V YD  Y+ N S   D+ I+++T  + + +EG
Sbjct  128  LVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

552) CBF_3141 in NC_017297


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.3 bits (308),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 76/175 (44%), Positives = 111/175 (64%), Gaps = 16/175 (9%)

Query  45   ILFL---WIKLDSKGPALFKQVRVGKDNKDFVIYKFRTMIVdaekkkkidleiediSNFV  101
            +LFL    IK++SKGP +FKQ R G  NK F IYKFR+M    +   ++  +  D +++ 
Sbjct  20   LLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADY-  75

Query  102  FQSKSDNRITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL-  160
                    ITK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      K  N  + 
Sbjct  76   --------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVH  127

Query  161  LVTPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEG  215
            LV PG+TGLAQV GR++   ++ V YD  Y+ N S   D+ I+++T  + + +EG
Sbjct  128  LVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

553) CLI_3152 in NC_009699


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.3 bits (308),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 76/175 (44%), Positives = 111/175 (64%), Gaps = 16/175 (9%)

Query  45   ILFL---WIKLDSKGPALFKQVRVGKDNKDFVIYKFRTMIVdaekkkkidleiediSNFV  101
            +LFL    IK++SKGP +FKQ R G  NK F IYKFR+M    +   ++  +  D +++ 
Sbjct  20   LLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADY-  75

Query  102  FQSKSDNRITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL-  160
                    ITK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      K  N  + 
Sbjct  76   --------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVH  127

Query  161  LVTPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEG  215
            LV PG+TGLAQV GR++   ++ V YD  Y+ N S   D+ I+++T  + + +EG
Sbjct  128  LVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

554) N646_0518 in NC_022349


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.3 bits (308),  Expect = 9e-19, Method: Compositional matrix adjust.
 Identities = 69/171 (41%), Positives = 103/171 (61%), Gaps = 16/171 (9%)

Query  14   KRTFDVLVAMLILVVTAPLFPFIALAIKTTSKGPVIYRQLRVGRCTPEKMDLFQIMKFRT  73
            KR FD++ ++  +++  PL+ ++++AIK  SKGP++++Q R G     K  LF+I KFR+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRS  57

Query  74   MYIDAEQRSGAVWATENDPR--ITPVGRFLRKTRLDELPQLFNVLRGEMSMIGPRPERPA  131
            M     Q +  V +   DP   IT  G+F+RKT LDELPQLFN+L+G+M+++GPRP    
Sbjct  58   M----RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN  113

Query  132  FYQKLEDEIPYFVERTYGVLPGITGLAQVNQGYDACIEDVRRKVGFDHSYA  182
             Y+ +E            V PG+TGLAQV  G D   +D  +KV +D  Y 
Sbjct  114  QYELIEKRTN---VNVHLVKPGLTGLAQV-MGRDNNTDD--QKVQYDKFYV  158

555) H04402_03169 in NC_017299


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 76/175 (44%), Positives = 109/175 (63%), Gaps = 16/175 (9%)

Query  45   ILFL---WIKLDSKGPALFKQVRVGKDNKDFVIYKFRTMIVdaekkkkidleiediSSFV  101
            +LFL    IK++SKGP +FKQ R G  NK F IYKFR+M  D+ +               
Sbjct  20   LLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATD-----------  68

Query  102  FQSKSDNRITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL-  160
             +  + + ITK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      K  N  + 
Sbjct  69   -RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVH  127

Query  161  LVTPGITGLAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEG  215
            LV PG+TGLAQV GR++   ++ V YD  Y+ N S   D+ I+++T  + + +EG
Sbjct  128  LVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEG  182

556) CLB_3122 in NC_009697


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 71/168 (43%), Positives = 108/168 (65%), Gaps = 13/168 (7%)

Query  50   IKLDSKGPALFKQVRVGKDNKDFVIYKFRTMVVdaekkkkidleiediSNFVFQSKSDNR  109
            IK++SKGP +FKQ R G  NK F IYKFR+M    +   ++  +  D ++++        
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYI--------  76

Query  110  VTKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRL-LVTPGITG  168
             TK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      +  N  + LV PG+TG
Sbjct  77   -TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTG  135

Query  169  LAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTVFKVFKNEGA  216
            LAQV GR++   ++ V YD  Y+ N S   D+ I+++T+ + + +EG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

557) CBO3093 in NC_009495


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 71/168 (43%), Positives = 108/168 (65%), Gaps = 13/168 (7%)

Query  50   IKLDSKGPALFKQVRVGKDNKDFVIYKFRTMVVdaekkkkidleiediSNFVFQSKSDNR  109
            IK++SKGP +FKQ R G  NK F IYKFR+M    +   ++  +  D ++++        
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYI--------  76

Query  110  VTKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRL-LVTPGITG  168
             TK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      +  N  + LV PG+TG
Sbjct  77   -TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTG  135

Query  169  LAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTVFKVFKNEGA  216
            LAQV GR++   ++ V YD  Y+ N S   D+ I+++T+ + + +EG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

558) CLC_2995 in NC_009698


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 71/168 (43%), Positives = 108/168 (65%), Gaps = 13/168 (7%)

Query  50   IKLDSKGPALFKQVRVGKDNKDFVIYKFRTMVVdaekkkkidleiediSNFVFQSKSDNR  109
            IK++SKGP +FKQ R G  NK F IYKFR+M    +   ++  +  D ++++        
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYI--------  76

Query  110  VTKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRL-LVTPGITG  168
             TK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      +  N  + LV PG+TG
Sbjct  77   -TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTG  135

Query  169  LAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTVFKVFKNEGA  216
            LAQV GR++   ++ V YD  Y+ N S   D+ I+++T+ + + +EG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

559) CLJ_B3359 in NC_012658


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 71/168 (43%), Positives = 108/168 (65%), Gaps = 13/168 (7%)

Query  50   IKLDSKGPALFKQVRVGKDNKDFVIYKFRTMVVdaekkkkidleiediSNFVFQSKSDNR  109
            IK++SKGP +FKQ R G  NK F IYKFR+M    +   ++  +  D ++++        
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADYI--------  76

Query  110  VTKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPNEYNQRL-LVTPGITG  168
             TK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      +  N  + LV PG+TG
Sbjct  77   -TKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTG  135

Query  169  LAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTVFKVFKNEGA  216
            LAQV GR++   ++ V YD  Y+ N S   D+ I+++T+ + + +EG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

560) Sphch_2188 in NC_015593


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 86.0 bits (307),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 59/145 (41%), Positives = 92/145 (64%), Gaps = 2/145 (1%)

Query  32   IDVGRPLLFRQFRSGRGGRPFIMIKFRTMR-DLRDRQGALLPDARRVTALGRFLRRSRLD  90
            I+   P++F+Q R+G   + F + KFR+MR D  +     L  A  +T  G+F+R++ LD
Sbjct  30   IESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLD  89

Query  91   ELPELVNIARGEMDFIGPRPLLPDTVDAMG-RDGVERGLVRPGLTGLAQVSGNTLLSLEE  149
            ELP+L NI +G+M  +GPRP L +  + +  R  V+  LV+PGLTGLAQV G    + ++
Sbjct  90   ELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQ  149

Query  150  KLRFDLRYVRNRSARLDARIIARTL  174
            K+++D  YV N+S +LD  II +T+
Sbjct  150  KVQYDKFYVENQSFKLDMYIIYKTI  174

561) CLK_2487 in NC_010520


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 85.7 bits (306),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 73/168 (44%), Positives = 107/168 (64%), Gaps = 13/168 (7%)

Query  50   IKLDSKGPALFKQVRVGKDNKDFVIYKFRTMVVdaekkkkidleiediSNFVFQSKSDNR  109
            IK++SKGP +FKQ R G  NK F IYKFR+M    +   ++  +  D +++         
Sbjct  28   IKIESKGPIVFKQDRPGVKNKLFKIYKFRSM---RQDTPNVATDRLDPADY---------  75

Query  110  ITKAGKFLRKTSLDEIPQLFNVLKGNMTLVGPRPEIPDVVKHYPKEYNQRL-LVTPGITG  168
            ITK+GKF+RKTSLDE+PQLFN+LKG+M++VGPRP + +      K  N  + LV PG+TG
Sbjct  76   ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTG  135

Query  169  LAQVSGRGEIELGKTVYYDLTYIKNFSVWYDIKILFQTAFKVFKNEGA  216
            LAQV GR++   ++ V YD  Y+ N S   D+ I+++T  + + +EG 
Sbjct  136  LAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

562) VS_1535 in NC_011753


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 84.9 bits (303),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 73/169 (44%), Positives = 103/169 (61%), Gaps = 12/169 (7%)

Query  21   KRTFDFVSSLIALILLAPVFPLIAIAIVLTSRGPIFYRQLRVGKSTPEKMEIFEIMKFRS  80
            KR FD+ SSL A+I++ P++ L++IAI + S+GPI ++Q R G     K  +F I KFRS
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRS  57

Query  81   MYEDAETRSGAVWATANDPRITPVGRFLRKTRLDELPQLINVLKGEMSLIGPRPERPTFY  140
            M +D+   +      A+   IT  G+F+RKT LDELPQL+N+LKG+M+++GPRP     Y
Sbjct  58   MRQDTPNVATDRLDPADY--ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQY  115

Query  141  TKLENEIPYFADRTYGVMPGITGLAQVNQGYDTCIDDVRRKVGFDHSYA  189
              +E+           V PG+TGLAQV  G D   DD  +KV +D  Y 
Sbjct  116  ELIEKRT---NVNVHLVKPGLTGLAQV-MGRDNNTDD--QKVQYDKFYV  158

563) cpsE2 in NC_020291


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 84.7 bits (302),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 76/185 (42%), Positives = 127/185 (69%), Gaps = 13/185 (7%)

Query  34   VKRTIDIICSLMGlitlsplliiismlikiesKGPMFFCQERVGKNEKAFRMYKFRSMVV  93
            +KR +DI+ SL ++I + PLL+++S+ IKIESKGP+ F Q+R G ++K F++YKFRSM  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  94   NAEELKKKLVSQNEMSGPMFKMKEDPRVTQIGKFIRKTSIDELPQLINVLKGEMSLVGPR  153
            ++ +     V+ + +  + +       +T+ GKFIRKTS+DELPQL+N+LKG+M++VGPR
Sbjct  61   DTPN-----VATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPR  108

Query  154  PSLPDEVADFENWMMKRLE-VKPGLTCYWQVSGRNDIEFEDWMKLDVKYVAERNTLTDIK  212
            P+L ++   +E++    ++ VKPGLT   QV GR++   ++ ++ D  YV +++   D+ 
Sbjct  109  PALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  213  LICKT  217
            +I KT
Sbjct  169  IIYKT  173

564) Glo7428_0552 in NC_019745


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 84.2 bits (300),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 75/186 (41%), Positives = 119/186 (64%), Gaps = 16/186 (8%)

Query  43   KRLLDITGSLVGLLI-LTLIFIPVAIAIKLDSPGPIFFRQERYGLHGRKFYIRKFRSMVV  101
            KR++DI +SL +++I L L+F+ V+IAIK++S GPI F+Q+R G+  + F I KFRSM  
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFL-VSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  102  NAEQLKSLVSNEASGLIFKNERDPRITRVGRFLRSSSLDELPQFWNVLVGEMSLVGTRPP  161
            ++ +    V+ +      + +    IT+ G+F+R +SLDELPQ+ N+L G+M++VG RP+
Sbjct  61   DTPN----VATD------RLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA  110

Query  162  TGDEVAQYNERHWQRLN-VRPGLTGEWQVSGRSSIKDFEQVVDLDLRY-QKQWHPLYDLA  219
              ++    + R    ++ V+PGLTG  QV GR +  D +Q V+ D  Y ++Q   L D+ 
Sbjct  111  LYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTD-DQKVQYDKFYVENQSFKL-DMY  168

Query  220  IIAKTI  225
            II KTI
Sbjct  169  IIYKTI  174

565) B5T_01718 in NC_018691


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 83.9 bits (299),  Expect = 5e-18, Method: Compositional matrix adjust.
 Identities = 57/132 (44%), Positives = 88/132 (67%), Gaps = 2/132 (1%)

Query  3    KFRTMTDE-RDENGELLPDDVRLTKFGAFLRSTSLDELPELINVLKGDMSLVGPRPLLME  61
            KFR+M ++  +   + L     +TK G F+R TSLDELP+L+N+LKGDM++VGPRP L +
Sbjct  54   KFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN  113

Query  62   YLPLYSER-QYRRHEVRPGITGWAQINGRNALSWDEKFELDVWYVENRSLWLDIKILFLT  120
               L   R +   H V+PG+TG AQ+ GR+  + D+K + D  YVEN+S+ LD+ I++ T
Sbjct  114  QYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKT  173

Query  121  VLKVVKRDGISH  132
            + + +  +G+SH
Sbjct  174  IKNTISSEGVSH  185

566) OEOE_1744 in NC_008528


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 81.0 bits (288),  Expect = 3e-17, Method: Compositional matrix adjust.
 Identities = 69/171 (41%), Positives = 100/171 (59%), Gaps = 22/171 (12%)

Query  42   EPKGPIFYLHDRVGKNHKHFKLIKFRSMRADADTYFKHH--PEDYQTFVKNDYKFPAGDD  99
            E+KGPI + +DR G ++K FK+ KFRSMR D+     ++  P DY               
Sbjct  31   ESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADY---------------  75

Query  100  PRVTKFGRILRRTSLDELPQLFNIFAGQMSIVGPRPI--TEPELRYYGSNVSKLLSVLPG  157
              +TK G+++R+TSLDELPQLFNI+ G+M++VGPRP    + EL    +NV+  L V PG
Sbjct  76   --ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHL-VKPG  132

Query  158  AMGLWQATGRSDIKYPERAKIDLEYVDHIGFWYDWYIVYLTMKAIFSRAGA  208
              GL Q  GR +    ++ + D  YV++ +F  D YI+Y T+K  +S  G 
Sbjct  133  LTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183

567) ACICU_00087 in NC_010611


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 80.2 bits (285),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 54/133 (41%), Positives = 89/133 (67%), Gaps = 2/133 (1%)

Query  1    MIKFRSMK-DAFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML  59
            + KFRSM+ D+ +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L
Sbjct  52   IYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL  111

Query  60   -KDFVALYSPEQARRLEVRPGMTGLAQVSGRNELDYEERFKCDVWYVDNHNIWVDFKIMF  118
             +++  +    +     V+PG+TGLAQV GR++   +++ + D  YV+N+++ +D  I++
Sbjct  112  YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  119  KTVKVMLKREGIN  131
            KT+K  +  EG++
Sbjct  172  KTIKNTISSEGVS  184

568) A1S_0061 in NC_009085


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 80.2 bits (285),  Expect = 7e-17, Method: Compositional matrix adjust.
 Identities = 54/133 (41%), Positives = 89/133 (67%), Gaps = 2/133 (1%)

Query  1    MIKFRSMK-DAFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML  59
            + KFRSM+ D+ +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L
Sbjct  52   IYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL  111

Query  60   -KDFVALYSPEQARRLEVRPGMTGLAQVSGRNELDYEERFKCDVWYVDNHNIWVDFKIMF  118
             +++  +    +     V+PG+TGLAQV GR++   +++ + D  YV+N+++ +D  I++
Sbjct  112  YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  119  KTVKVMLKREGIN  131
            KT+K  +  EG++
Sbjct  172  KTIKNTISSEGVS  184

569) BJAB0868_00105 in NC_021729


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 79.7 bits (283),  Expect = 8e-17, Method: Compositional matrix adjust.
 Identities = 55/133 (42%), Positives = 88/133 (67%), Gaps = 2/133 (1%)

Query  1    MIKFRSMK-DTFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML  59
            + KFRSM+ DT +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L
Sbjct  52   IYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL  111

Query  60   -KDFVALYSPEQARRLEVRPGMTGLAQVSGRNELDYEERFKCDVWYVDNHNVWVDFKIMF  118
             +++  +    +     V+PG+TGLAQV GR++   +++ + D  YV+N++  +D  I++
Sbjct  112  YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  119  KTVKVMLKREGIN  131
            KT+K  +  EG++
Sbjct  172  KTIKNTISSEGVS  184

570) LSA_01630 in NC_015978


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 79.7 bits (283),  Expect = 9e-17, Method: Compositional matrix adjust.
 Identities = 54/133 (41%), Positives = 84/133 (64%), Gaps = 18/133 (13%)

Query  18   KGVFDIAMSALGLVFLSPVIAVIAYGIKHEDGGPIIYKQVRVGKDGKRFEMYKFHSMVIN  77
            K +FDI  S  +++++ P++ +++ +IK E  GPI++KQ R G   K F +YKF+SM  +
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  78   ADQLLSTLKGQNEIDGAMFKMKYDPRITKVGHFIREHSLDELPQLVNVLKGDMSLVGPRP  137
            + ++     + + +D A +       ITK G FIR  SLDELPQL N+LKGDM++VGPRP
Sbjct  62   TPNV-----ATDRLDPADY-------ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRP  109

Query  138  SLPSEVEQYTDYD  150
            +L      Y +Y+
Sbjct  110  AL------YNQYE  116

571) M636_14555 in NC_021848


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 79.4 bits (282),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 71/171 (42%), Positives = 104/171 (61%), Gaps = 16/171 (9%)

Query  14   KRTFDvlvallillvTAPLFPFIALAIKVSSKGPVIYRQLRVGRCTPEKMDLFQIMKFRT  73
            KR FD++ +L  +++  PL+ ++++AIK+ SKGP++++Q R G     K  LF+I KFR+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRS  57

Query  74   MYIDAEQRSGAVWATENDPR--ITPVGRFLRKTRLDELPQLFNVLKGEMSMIGPRPERPA  131
            M     Q +  V +   DP   IT  G+F+RKT LDELPQLFN+LKG+M+++GPRP    
Sbjct  58   M----RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN  113

Query  132  FYQKLEDEIPYFVERTYGVLPGITGLAQVNQGYDACIEDVRRKVGFDHSYA  182
             Y+ +E            V PG+TGLAQV  G D   +D  +KV +D  Y 
Sbjct  114  QYELIEKRTN---VNVHLVKPGLTGLAQV-MGRDNNTDD--QKVQYDKFYV  158

572) VP1458 in NC_004603


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 79.4 bits (282),  Expect = 1e-16, Method: Compositional matrix adjust.
 Identities = 71/171 (42%), Positives = 104/171 (61%), Gaps = 16/171 (9%)

Query  14   KRTFDvlvallillvTAPLFPFIALAIKVSSKGPVIYRQLRVGRCTPEKMDLFQIMKFRT  73
            KR FD++ +L  +++  PL+ ++++AIK+ SKGP++++Q R G     K  LF+I KFR+
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRS  57

Query  74   MYIDAEQRSGAVWATENDPR--ITPVGRFLRKTRLDELPQLFNVLKGEMSMIGPRPERPA  131
            M     Q +  V +   DP   IT  G+F+RKT LDELPQLFN+LKG+M+++GPRP    
Sbjct  58   M----RQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYN  113

Query  132  FYQKLEDEIPYFVERTYGVLPGITGLAQVNQGYDACIEDVRRKVGFDHSYA  182
             Y+ +E            V PG+TGLAQV  G D   +D  +KV +D  Y 
Sbjct  114  QYELIEKRTN---VNVHLVKPGLTGLAQV-MGRDNNTDD--QKVQYDKFYV  158

573) rfbP in NC_016603


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 78.9 bits (280),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 54/133 (41%), Positives = 87/133 (66%), Gaps = 2/133 (1%)

Query  1    MIKFRSMK-DAFDAQGNPLPDEARITPFGQKLRSTSLDEMPQLINVLKGDMSVVGPRPML  59
            + KFRSM+ D+ +   + L     IT  G+ +R TSLDE+PQL+N+LKGDM+VVGPRP L
Sbjct  52   IYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPAL  111

Query  60   -KDFVALYSPEQARRLEVRPGMTGLAQVSGRNELDYEERFKCDVWYVDNHNVWVDFKIMF  118
             +++  +    +     V+PG+TGLAQV GR++   +++ + D  YV+N++  +D  I++
Sbjct  112  YNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIY  171

Query  119  KTVKVMTKREGIN  131
            KT+K     EG++
Sbjct  172  KTIKNTISSEGVS  184

574) SpiGrapes_1585 in NC_016633


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 78.6 bits (279),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 78/185 (43%), Positives = 125/185 (68%), Gaps = 2/185 (1%)

Query  7    VKRILDILCSLSAlivffpvlvflvllvRIKLGSPVFFRQLRPGLHEQLFTLYKFRTM-T  65
            +KRI+DI+ SL A+I+F+P+L ++ + ++I   +P+ F+Q RPG+ ++LF +YKFR+M  
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  66   DKKDAQGALLPDSERLTTFGKKLRATSldelpellnillGDMSLVGPRPLLVRDMAFMSD  125
            D  +     L  ++ +T  GK +R TSLDELP+L+NIL GDM++VGPRP L  +  ++  
Sbjct  61   DTPNVATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEK  120

Query  126  -DQRRRHGVKPGLTGLAQINGRNAISWDLKLQFDLAYLEHISFYRDFSILCKTFGNVLKE  184
              +   H VKPGLTGLAQ+ GR+  + D K+Q+D  Y+E+ SF  D  I+ KT+ N +  
Sbjct  121  RTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKNTISS  180

Query  185  ADITE  189
             ++++
Sbjct  181  EGVSH  185

575) VEJY3_08780 in NC_016613


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 78.6 bits (279),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 71/173 (42%), Positives = 102/173 (59%), Gaps = 17/173 (9%)

Query  31   PVMPFIAIAIKLSSSGPVFYKQLRVGKSTPEKMMFFEIIKFRTMYQDAEQHTGAVWATEN  90
            P++ +++IAIK+ S GP+ +KQ R G     K  +F I KFR+M QD+ + +       +
Sbjct  19   PLLFLVSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRSMRQDTPNVATDRLDPAD  74

Query  91   DPRITPVGRFLRKTRLDEIPQLFNVVKGDMSLIGPRPERPSFYSKLESAIPYFADRTYGV  150
               IT  G+F+RKT LDE+PQLFN++KGDM+++GP   RP++Y++ E            V
Sbjct  75   Y--ITKTGKFIRKTSLDELPQLFNILKGDMAVVGP---RPALYNQYELIEKRTNVNVHLV  129

Query  151  MPGITGLAQVNQGYDTCIDDVRRKVGYDHSYALSLCSMKSWLSMDMSIITKTI  203
             PG+TGLAQV  G D   DD  +KV YD  Y       +  + +DM II KTI
Sbjct  130  KPGLTGLAQV-MGRDNNTDD--QKVQYDKFYV-----ENQSFKLDMYIIYKTI  174

576) SAPIG0143 in NC_017333


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 78.4 bits (278),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 55/134 (42%), Positives = 91/134 (68%), Gaps = 15/134 (11%)

Query  1    MCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVE  60
            M +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       
Sbjct  58   MRQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA------  110

Query  61   LFSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELY  114
            L++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++Y
Sbjct  111  LYNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  115  ISIRTLMVVITGEG  128
            I  +T+   I++EG
Sbjct  169  IIYKTIKNTISSEG  182

577) SAT0131_00116 in NC_017347


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 78.4 bits (278),  Expect = 2e-16, Method: Compositional matrix adjust.
 Identities = 55/134 (42%), Positives = 91/134 (68%), Gaps = 15/134 (11%)

Query  1    MCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVE  60
            M +++ + ++++ D   D IT+ GKFIRKT +DELPQL+N++KG+M+ +GPRP       
Sbjct  58   MRQDTPNVATDRLD-PADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPA------  110

Query  61   LFSS-EIIGFEQRC-----LVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELY  114
            L++  E+I  E+R      LV PGLTGLAQ+ G  + T +QK++YD  Y+++ S+ +++Y
Sbjct  111  LYNQYELI--EKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMY  168

Query  115  ISIRTLMVVITGEG  128
            I  +T+   I++EG
Sbjct  169  IIYKTIKNTISSEG  182

578) BF638R_1460 in NC_016776


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 78.1 bits (277),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 64/142 (46%), Positives = 96/142 (68%), Gaps = 6/142 (4%)

Query  1    MIRFFDIVFSLLGILLLSPVFLLLYIAICLESKGGGFYKQLRVGRYGGDFYVYKFRSMRV  60
            M R+FDI  SL +I+++ P+++L+ IAI +ESKG   +KQ R G     F +YKFRSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   GADKKGLITVGGRDPR--ITRTGYLIRKYKLDELPQLFNVLKGDMSLVGPRPEV-RKYVD  117
            ++ +   ++ +  DP   IT+TG +IRK  LDELPQLFN+LKGDM++VGPRP +  +Y  
Sbjct  61   DTPN---VATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL  117

Query  118  LYTDEQKKVLSVRPGITDYASI  139
            +    + +V  V+PG+T+ A +
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQV  139

579) wcfS in NC_003228


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 78.1 bits (277),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 64/142 (46%), Positives = 96/142 (68%), Gaps = 6/142 (4%)

Query  1    MIRFFDIVFSLLGILLLSPVFLLLYIAICLESKGGGFYKQLRVGRYGGDFYVYKFRSMRV  60
            M R+FDI  SL +I+++ P+++L+ IAI +ESKG   +KQ R G     F +YKFRSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   GADKKGLITVGGRDPR--ITRTGYLIRKYKLDELPQLFNVLKGDMSLVGPRPEV-RKYVD  117
            ++ +   ++ +  DP   IT+TG +IRK  LDELPQLFN+LKGDM++VGPRP +  +Y  
Sbjct  61   DTPN---VATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL  117

Query  118  LYTDEQKKVLSVRPGITDYASI  139
            +    + +V  V+PG+T+ A +
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQV  139

580) BF1445 in NC_006347


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 78.1 bits (277),  Expect = 3e-16, Method: Compositional matrix adjust.
 Identities = 64/142 (46%), Positives = 96/142 (68%), Gaps = 6/142 (4%)

Query  1    MIRFFDIVFSLLGILLLSPVFLLLYIAICLESKGGGFYKQLRVGRYGGDFYVYKFRSMRV  60
            M R+FDI  SL +I+++ P+++L+ IAI +ESKG   +KQ R G     F +YKFRSMR 
Sbjct  1    MKRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQ  60

Query  61   GADKKGLITVGGRDPR--ITRTGYLIRKYKLDELPQLFNVLKGDMSLVGPRPEV-RKYVD  117
            ++ +   ++ +  DP   IT+TG +IRK  LDELPQLFN+LKGDM++VGPRP +  +Y  
Sbjct  61   DTPN---VATDRLDPADYITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL  117

Query  118  LYTDEQKKVLSVRPGITDYASI  139
            +    + +V  V+PG+T+ A +
Sbjct  118  IEKRTNVNVHLVKPGLTGLAQV  139

581) M634_10035 in NC_021847


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 77.6 bits (275),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 64/149 (43%), Positives = 89/149 (60%), Gaps = 16/149 (10%)

Query  36   IALAIKVSSKGPVIYRQLRVGRCTPEKMDLFQIMKFRTMYIDAEQRSGAVWATENDPR--  93
            +++AIK+ SKGP++++Q R G     K  LF+I KFR+M     Q +  V +   DP   
Sbjct  24   VSIAIKIESKGPIVFKQDRPG----VKNKLFKIYKFRSM----RQDTPNVATDRLDPADY  75

Query  94   ITPVGRFLRKTRLDELPQLFNVLKGEMSMIGPRPERPAFYQKLEDEIPYFVERTYGVLPG  153
            IT  G+F+RKT LDELPQLFN+LKG+M+++GPRP     Y+ +E            V PG
Sbjct  76   ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYELIEKRTN---VNVHLVKPG  132

Query  154  ITGLAQVNQGYDACIEDVRRKVGFDHSYA  182
            +TGLAQV  G D   +D  +KV +D  Y 
Sbjct  133  LTGLAQV-MGRDNNTDD--QKVQYDKFYV  158

582) Oweho_3317 in NC_016599


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 77.1 bits (273),  Expect = 6e-16, Method: Compositional matrix adjust.
 Identities = 60/146 (42%), Positives = 96/146 (66%), Gaps = 12/146 (8%)

Query  31   VFFKQKRSGLNGISFILYKFQSMGQGNGEISP-----------WGKFLRRTSLDELPQLI  79
            + FKQ R+G++   F +YKF+SM Q+  +++             GKF+R+TSLDELPQL+
Sbjct  36   IVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLDELPQLF  95

Query  80   NIVKGDMNFIGPRpll-peylelyteeQYKRHSVKPGLTGWAQVNGRNAISWERQFEMDL  138
            NI+KGDM  +GPRP L  +Y  +    + + H VKPGLTG AQV GR+  + +++ + D 
Sbjct  96   NILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDK  155

Query  139  YYVQHQSIYLDLKVLAKTFLKVFTSS  164
            +YV++QS+ LD+ ++ KT+ + ++S 
Sbjct  156  FYVENQSFKLDMYIIYKTIKNTISSE  181

583) FIC_00351 in NC_013062


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 76.3 bits (270),  Expect = 1e-15, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 131/188 (70%), Gaps = 12/188 (6%)

Query  7    KRLIDFTAALVGLIILSPVFLLITLCLAIANSGKPFFFQKRPGikekifsiikfkTM-ND  65
            KR++D+ ++L ++II+ P+++L+++ + I + G   F Q RPG+K+K+F I KF++M +D
Sbjct  2    KRIFDIFSSLYAIIIFLPLLFLVSIAIKIESKGPIVFKQDRPGVKNKLFKIYKFRSMRQD  61

Query  66   RRDSKGDLL--SDYKRLTRIGSFVRKTSLDEIPQLINVLKGEMSLIGprpllpeylplyT  123
              +   D L  +DY  +T+ G F+RKTSLDE+PQL+N+LKG+M+++GPRP L +   L  
Sbjct  62   TPNVATDRLDPADY--ITKTGKFIRKTSLDELPQLFNILKGDMAVVGPRPALYNQYEL--  117

Query  124  SIQKRR----HEVRPGITGWAQVNGRNAISWEDKFTFDVWYVDNlslsldlkillMTVKK  179
             I+KR     H V+PG+TG AQV GR+  + ++K  +D  YV+N S+ LD+ I+  T+K+
Sbjct  118  -IEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQKVQYDKFYVENQSFKLDMYIIYKTIKN  176

Query  180  VFKSEGIN  187
             + SEG++
Sbjct  177  TISSEGVS  184

584) Echvi_0061 in NC_019904


> U10927|34|G34|16579852|AAL26667.1|Staphylococcus_aureus_M|+|25458..26015|cap1N|-|type 
8 capsule synthesis gene
Length=185

 Score = 75.5 bits (267),  Expect = 2e-15, Method: Compositional matrix adjust.
 Identities = 65/154 (43%), Positives = 101/154 (66%), Gaps = 2/154 (1%)

Query  35   IDFKGNPFFVQDRigkggkifkifkLRTMK-DIVQSNGDLLPDKERLTLLGRWLRKASLD  93
            I+ KG   F QDR G   K+FKI+K+R+M+ D  +   D L   + +T  G+ +RK+SLD
Sbjct  30   IESKGPIVFKQDRPGVKNKLFKIYKFRSMRQDTPNVATDRLDPADYITKTGKFIRKTSLD  89

Query  94   ELPQFLNVALGDMSLIGPRP-LLVDYLPLYSKEESKRHAVKPGITGLAQVNGRNTISWKE  152
            ELPQ++N+  GDM+++GPRP L  +Y  +  + + + H VKPG+TGLAQV GR+  +  +
Sbjct  90   ELPQLFNILKGDMAVVGPRPALYNQYELIEKRTNVNVHLVKPGLTGLAQVMGRDNNTDDQ  149

Query  153  KFAYDLEYVNRISFKLDVRILVKSVRKPFDVKDV  186
            K  YD  YV+  SFKLD+ I+ K++++ +   +V
Sbjct  150  KVQYDKFYVENQSFKLDMYIIYKTIKNTISSEGV  183