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PAthogenisity Island DataBase (PAI DB)

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Homologs of EFAU085_00716 gene of NC_021994_R1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EFAU085_00716
( YP_008394240.1 )

Type IV secretory pathway, VirB4 component

NC_021994
(Enterococcus faecium AUS0085)

0.0

100

2) EFAU004_02794
( YP_005355992.1 )

Type IV secretory pathway, VirB4 components

NC_017022
(Enterococcus faecium Aus0004)

0.0

3) CD630_11100
( YP_001087599.1 )

hydrolase

NC_009089
(Clostridium difficile 630)

0.0

4) Ethha_1897
( YP_004092150.1 )

hypothetical protein

NC_014828
(Ethanoligenens harbinense YUAN-3)

0.0

5) RHOM_01865
( YP_004837427.1 )

hypothetical protein

NC_015977
(Roseburia hominis A2-183)

0.0

6) CK5_22630
( YP_007805589.1 )

hypothetical protein

NC_021022
([Ruminococcus] obeum A2-162)

0.0

7) DCF50_p28
( YP_006912019.1 )

TrsE-like protein

NC_018867
(Dehalobacter sp. CF)

0.0

8) Closa_3715
( YP_003823858.1 )

TraE protein

NC_014376
(Clostridium saccharolyticum WM1)

0.0

9) OBV_30220
( YP_004882726.1 )

TraE family protein

NC_016048
(Oscillibacter valericigenes Sjm18-20)

0.0

10) CXIVA_10150
( YP_004708084.1 )

hypothetical protein

NC_015737
(Clostridium sp. SY8519)

0.0

11) HMPREF0389_00238
( YP_005054142.1 )

type IV conjugative transfer system protein TraE

NC_016630
(Filifactor alocis ATCC 35896)

0.0

12) EF2320
( NP_815976.1 )

traE protein

NC_004668
(Enterococcus faecalis V583)

0.0

13) CK1_03230
( YP_007782325.1 )

hypothetical protein

NC_021014
(Ruminococcus sp. SR1/5)

0.0

14) EUBREC_3574
( YP_002939434.1 )

hypothetical protein

NC_012781
(Eubacterium rectale ATCC 33656)

0.0

15) FP2_22350
( YP_007837874.1 )

Domain of unknown function DUF87.

NC_021042
(Faecalibacterium prausnitzii L2/6)

0.0

16) FP2_21750
( YP_007837827.1 )

hypothetical protein

NC_021042
(Faecalibacterium prausnitzii L2/6)

0.0

17) SEQ_1263
( YP_002746553.1 )

conjugal transfer protein

NC_012471
(Streptococcus equi 4047)

0.0

18) HMPREF0389_00184
( YP_005054195.1 )

type IV conjugative transfer system protein TraE

NC_016630
(Filifactor alocis ATCC 35896)

0.0

19) SANR_1310
( YP_008501018.1 )

conjugal transfer protein

NC_022239
(Streptococcus anginosus C238)

0.0

20) CD630_18560
( YP_001088362.1 )

hydrolase

NC_009089
(Clostridium difficile 630)

0.0

21) HMPREF0389_00661
( YP_005054801.1 )

type IV conjugative transfer system protein TraE

NC_016630
(Filifactor alocis ATCC 35896)

0.0

22) CDR20291_1790
( YP_003218280.1 )

conjugal transfer protein

NC_013316
(Clostridium difficile R20291)

0.0

23) SZO_12860
( YP_002744803.1 )

conjugal transfer protein

NC_012470
(Streptococcus equi H70)

0.0

24) SANR_1350
( YP_008501056.1 )

putative conjugal transfer protein

NC_022239
(Streptococcus anginosus C238)

0.0

25) SDE12394_07195
( YP_006013467.1 )

conjugal transfer protein

NC_017567
(Streptococcus dysgalactiae ATCC 12394)

0.0

26) SAIL_7550
( YP_008117374.1 )

TrsE-like protein

NC_021507
(Streptococcus agalactiae ILRI112)

0.0

27) SIR_0990
( YP_008512923.1 )

putative conjugal transfer protein

NC_022246
(Streptococcus intermedius B196)

0.0

28) CD630_04180
( YP_001086885.1 )

conjugative transposon protein

NC_009089
(Clostridium difficile 630)

0.0

29) GGS_1239
( YP_006859874.1 )

transfer complex protein

NC_018712
(Streptococcus dysgalactiae RE378)

0.0

30) SII_1013
( YP_008497184.1 )

putative conjugal transfer protein

NC_022237
(Streptococcus intermedius C270)

0.0

31) SDSE_1348
( YP_006904900.1 )

Type IV secretion system protein virB4

NC_019042
(Streptococcus dysgalactiae AC-2713)

0.0

32) Ethha_1760
( YP_004092017.1 )

hypothetical protein

NC_014828
(Ethanoligenens harbinense YUAN-3)

0.0

33) SPAP_0880
( YP_003876471.1 )

type IV secretory pathway, VirB4 component

NC_014494
(Streptococcus pneumoniae AP200)

0.0

34) FMG_0960
( YP_001692268.1 )

hypothetical protein

NC_010376
(Finegoldia magna ATCC 29328)

0.0

35) SANR_1858
( YP_008501527.1 )

putative conjugal transfer protein

NC_022239
(Streptococcus anginosus C238)

0.0

36) SEQ_0742
( YP_002746087.1 )

conjugal transfer protein

NC_012471
(Streptococcus equi 4047)

0.0

37) Apre_1815
( YP_003142390.1 )

putative type IV secretory pathway VirB4 protein

NC_013164
(Anaerococcus prevotii DSM 20548)

0.0

38) RHOM_10340
( YP_004839111.1 )

hypothetical protein

NC_015977
(Roseburia hominis A2-183)

0.0

39) SIR_1329
( YP_008513260.1 )

conjugal transfer protein

NC_022246
(Streptococcus intermedius B196)

0.0

40) RHOM_15395
( YP_004840117.1 )

hypothetical protein

NC_015977
(Roseburia hominis A2-183)

0.0

41) RUM_20000
( YP_007830040.1 )

Domain of unknown function DUF87.

NC_021039
(Ruminococcus champanellensis 18P13)

0.0

42) CKL_0284
( YP_001393686.1 )

hypothetical protein

NC_009706
(Clostridium kluyveri DSM 555)

0.0

43) Closa_0291
( YP_003820554.1 )

hypothetical protein

NC_014376
(Clostridium saccharolyticum WM1)

0.0

44) SSUD9_1136
( YP_006080585.1 )

conjugal transfer protein

NC_017620
(Streptococcus suis D9)

0.0

45) RHOM_13655
( YP_004839769.1 )

hypothetical protein

NC_015977
(Roseburia hominis A2-183)

0.0

46) CKR_0238
( YP_002470703.1 )

hypothetical protein

NC_011837
(Clostridium kluyveri NBRC 12016)

0.0

47) EUBREC_0779
( YP_002936699.1 )

hypothetical protein

NC_012781
(Eubacterium rectale ATCC 33656)

5e-144

48) EUBREC_2716
( YP_002938580.1 )

hypothetical protein

NC_012781
(Eubacterium rectale ATCC 33656)

5e-144

49) Rumal_3886
( YP_004090196.1 )

TrsE protein

NC_014825
(Ruminococcus albus 7)

3e-142

50) MGAS10750_Spy1690
( YP_603184.1 )

TrsE

NC_008024
(Streptococcus pyogenes MGAS10750)

5e-142

• Sequence Alignments

1) EFAU085_00716 in NC_021994


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score = 1280 bits (4858),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 799/799 (100%), Positives = 799/799 (100%), Gaps = 0/799 (0%)

Query  1    MSKKEIPRETEKTKLTRAQRKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGV  60
            MSKKEIPRETEKTKLTRAQRKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGV
Sbjct  1    MSKKEIPRETEKTKLTRAQRKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGV  60

Query  61   FSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEI  120
            FSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEI
Sbjct  61   FSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEI  120

Query  121  APQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLG  180
            APQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLG
Sbjct  121  APQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLG  180

Query  181  YFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNA  240
            YFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNA
Sbjct  181  YFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNA  240

Query  241  KTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQtkaiktikrkit  300
            KTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKIT
Sbjct  241  KTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKIT  300

Query  301  DLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVAD  360
            DLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVAD
Sbjct  301  DLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVAD  360

Query  361  TKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFV  420
            TKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFV
Sbjct  361  TKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFV  420

Query  421  PFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVF  480
            PFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVF
Sbjct  421  PFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVF  480

Query  481  LTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDF  540
            LTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDF
Sbjct  481  LTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDF  540

Query  541  VLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPE  600
            VLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPE
Sbjct  541  VLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPE  600

Query  601  ADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVT  660
            ADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVT
Sbjct  601  ADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVT  660

Query  661  ANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIE  720
            ANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIE
Sbjct  661  ANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIE  720

Query  721  NILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIP  780
            NILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIP
Sbjct  721  NILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIP  780

Query  781  HNTQLYKIMTTRLNEVAGV  799
            HNTQLYKIMTTRLNEVAGV
Sbjct  781  HNTQLYKIMTTRLNEVAGV  799

2) EFAU004_02794 in NC_017022


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score = 1279 bits (4852),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 798/799 (99%), Positives = 799/799 (100%), Gaps = 0/799 (0%)

Query  1    MSKKEIPRETEKTKLTRAQRKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGV  60
            MSKKEIPRETEKTKLTRAQRKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGV
Sbjct  1    MSKKEIPRETEKTKLTRAQRKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGV  60

Query  61   FSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEI  120
            FSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEI
Sbjct  61   FSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEI  120

Query  121  APQGDDFDDIRAEYTGILQKRLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLG  180
            APQGDDFDDIRAEYTGILQK+LANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLG
Sbjct  121  APQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLG  180

Query  181  YFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNA  240
            YFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNA
Sbjct  181  YFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNA  240

Query  241  KTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQtkaiktikrkit  300
            KTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKIT
Sbjct  241  KTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKIT  300

Query  301  DLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVAD  360
            DLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVAD
Sbjct  301  DLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVAD  360

Query  361  TKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFV  420
            TKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFV
Sbjct  361  TKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFV  420

Query  421  PFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVF  480
            PFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVF
Sbjct  421  PFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVF  480

Query  481  LTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDF  540
            LTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDF
Sbjct  481  LTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDF  540

Query  541  VLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPE  600
            VLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPE
Sbjct  541  VLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPE  600

Query  601  ADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVT  660
            ADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVT
Sbjct  601  ADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVT  660

Query  661  ANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIE  720
            ANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIE
Sbjct  661  ANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIE  720

Query  721  NILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIP  780
            NILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIP
Sbjct  721  NILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIP  780

Query  781  HNTQLYKIMTTRLNEVAGV  799
            HNTQLYKIMTTRLNEVAGV
Sbjct  781  HNTQLYKIMTTRLNEVAGV  799

3) CD630_11100 in NC_009089


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  877 bits (3323),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 514/804 (64%), Positives = 673/804 (84%), Gaps = 6/804 (0%)

Query  6    TKKTREAAGNRRKLTRAEKKQIAEAIRKAKGDGKARTAQQTIPYLAMYPDGICKVTEKRY  65
            +KK      ++ KLTRA++K+I   IRK KGDG+++TAQQ+IPY  MYPDG+C+V+   +
Sbjct  2    SKKEIPRETEKTKLTRAQRKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVF  61

Query  66   SKCVMFEDINYQLAQADDKTAIFENWCDFLNYFDASVSVQLSFINQGTQREQAEKAISIP  125
            SKC+ F DI+YQLAQ+D +TAIFE+ CD+ NY DAS+ +Q+SF+N+  +  Q  K++ I+
Sbjct  62   SKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEIA  121

Query  126  AQEDAFNSIRTEYSDMLKNQLSKGNNGLVKHKYITFTVEADNKAAAKSRLSRIETDVLNN  185
            +Q D F+ IR+EY+++L++QL++GNNG+VK KY+TFT+EA++  AA++RL RI  D+L  
Sbjct  122  PQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLGY  181

Query  186  FKVLGVTARPLSGYEHLKVLHGVFHPEGEPFSFSFDWLTPSGLTTKDFIAPSSFHFGEGR  245
            FK +G  A+ + G E+L++LHGV+HP+GE F+F   WL+PSGL+TKDFIAPSS+ FG+++
Sbjct  182  FKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAK  241

Query  246  YFRMGKKIGAASFLEILAPELNDRMLADILDLETGVIVNLHIRSIDQSEAIKTIKRKITD  305
             F MG K GA SFL+IL+PEL+D MLAD+L+ E+GV+VNLH+++I+Q+ AIKTIKRKITD
Sbjct  242  TFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKITD  301

Query  306  LDKMKIEEQKKAVRSGYDMDIIPSDLATFGSEAKNLLQDLQSRNERMFLLTFLVVNMADT  365
            LD MKI EQKKAVRSGYDMDI+PSDLAT+G +AK+LL  LQ+RNER+F LTFLV+N+ADT
Sbjct  302  LDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVADT  361

Query  366  KRKLENDIFAAAGIAQKYNCRLTRLDYQQEAGLLSSVPIGENLIPIQRGLTTSSTAIFIP  425
            K+KL+ND+F AAG+AQK NC L RLDYQQE GL SS+P+G N I IQR+LTTSS A+F+P
Sbjct  362  KQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVP  421

Query  426  FITQELFQTGQALYYGLNALSNNMILCDRKQLKNPNGLILGTPGSGKSFAAKREMTNAFL  485
            F+TQELFQ G A+YYG+NA S NMI+ DRKQ + PN+L LGTPGSGKS + K E+ + FL
Sbjct  422  FVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFL  481

Query  486  ITDDDIIICDPEAEYFSLVQRLNGQVIRLSPTGRGIDGKPQYVNPMDINLNYSEDDNPLA  545
             T DDI+I DPEAEY++LV+RL+GQVIRLSPT++      ++VNP+DINLNYSEDDNPLA
Sbjct  482  TTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSK------DFVNPLDINLNYSEDDNPLA  535

Query  546  LKSDFILSLCELVIGGKEGLQPVDKTVIDRAVRNVYRPFLADPDPAKMPILGDLYDELLR  605
            LKSDF+LS+CELV+GGK+GL++++KTVIDRAVR +YRP+LADP P +MPIL+DL   LL 
Sbjct  536  LKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLD  595

Query  606  QPEPEAARIAAALELYVSGSLNVFNHRTNVELNNRLVCFDIkqlgkqlkklgmlIVQDQT  665
            Q  PEA R+A AL+LYVSGSLNVFNHRTNV++ NRLV FDIK+LGKQLKKLGMLIVQDQ 
Sbjct  596  QHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQI  655

Query  666  WNRVTINRAEKKSTRYYMDEFHLLLKEEQTAAYSVEIWKRFRKWGGIPTAITQNVKDLLA  725
            W RVT NR++ K+T+Y+ DEFHLLLKEEQTAAYS EIWKRFRKWGGIPT+ TQNVKDLL+
Sbjct  656  WGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLS  715

Query  726  SREVENIFENSDFVLMLNQAQGDRTILAKQLNISPQQMKYVIHTEAGEGLIFYGNVVLPF  785
            S E+ENI+ENSDF+ +LNQA GDR ILA +LN+S +Q KY+ ++E+GEGL+++ NVVLPF
Sbjct  716  SPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPF  775

Query  786  VDRFPKDTELYRVMTTKPEEVSSL  809
             + +P +T+LY++MTT+ +EV+++
Sbjct  776  TNPIPHNTQLYKIMTTRLNEVAGV  799

4) Ethha_1897 in NC_014828


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  872 bits (3301),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/786 (63%), Positives = 660/786 (84%), Gaps = 3/786 (0%)

Query  1    MSHAERRQIEAAVAKAQQTDKKKQSAQDSIPFQRMFPDGICRVTDSYYTKTVQFQDINYQ  60
            +++A+R++I+A + K +  D + ++AQ+SIP++ M+PDG+CRV+ + ++K ++F DI+YQ
Sbjct  15   LTRAQRKEIDAVIRKYK-GDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQ  73

Query  61   LNQNEDKTAIFEGWCDFLNYFDSSIKFQLSFLNLSATRDSFAKSVTIPPQGDDFDSLRSE  120
            L Q + +TAIFE  CD+ NY D+SI +Q+SFLN       +AKS  I+PQGDDFD +R+E
Sbjct  74   LAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAE  133

Query  121  YTEMLRNQLAKGNNGLIKTKYLTFGIEADSLKAAKPRLERIEIDILNNFKHLGVTATSLN  180
            YT +L++QLA+GNNG++KTKYLTF IEA+S+KAA++RL RI +D+L  FK +G  A  ++
Sbjct  134  YTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMD  193

Query  181  GADRLRLLHDILRMDAPEPFRFSWDWLAPSGLSVKDFIAPSSFEFKSGSMFSMGRQVGAV  240
            G +RL LLH++ + D+ E F F W WLAPSGLS KDFIAPSS+ F ++  F+MG + GAV
Sbjct  194  GWERLNLLHGVYHPDG-EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAV  252

Query  241  SFLQILAPELNDRMLADFLDMESSLIVTMHIQSIDQVSAIKTVKRKITDLDSMKIQEQKK  300
            SFLQIL+PEL+D MLADFL+ ES+++V +H+Q+I+Q  AIKT+KRKITDLD+MKI EQKK
Sbjct  253  SFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKK  312

Query  301  AIRSGYDMDIIPSDLATYGEEAKKLLQDLQSRNERMFLVTFLVLNVAENRQRLDNNVFQA  360
            A+RSGYDMDI+PSDLATYGE+AKKLL  LQ+RNER+F +TFLVLNVA+ +Q+L+N+VFQA
Sbjct  313  AVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQA  372

Query  361  SSLAQKYNCALTRLDFRQEEGLMSSLPLGLNQVEIQRGLTTSSTAIFIPFTTQELFQTGR  420
            +++AQK NC+L RLD++QE+GL SSLPLG+NQ+ IQR+LTTSS A+F+PF TQELFQ G 
Sbjct  373  AGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGG-  431

Query  421  EALYCGLNALSNNLIMVDRKLLKNPNGLILGTPGAGKSFAAKREIVNVFLVTNDDIIVCD  480
             A+Y G+NA S N+IM+DRK  + PN+L LGTPG+GKS + K EIV+VFL T DDI++ D
Sbjct  432  AAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISD  491

Query  481  PEAEYGPLIERLHGQIIKISPASTDYINPMDINLNYSEEENPLSLKSDFILSLCELIVGG  540
            PEAEY PL+ RLHGQ+I++SP+S D++NP+DINLNYSE++NPL+LKSDF+LS+CEL++GG
Sbjct  492  PEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGG  551

Query  541  KEGLQPVEKTVIDRCVRLVYRNYLSDPRPESMPVLEDLYNELRRQDEKEAQYVATALEIY  600
            K+GL+++EKTVIDR VR++YR YL+DPRPE+MP+L DL + L  Q+  EA+ VA AL++Y
Sbjct  552  KNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLY  611

Query  601  VTGSLNVFNHRTTVNVRNRVISYDIRELGKQLKKIGMLIVQDQVWNRVTVNRAVGKSTRY  660
            V+GSLNVFNHRT V++ NR++S+DI+ELGKQLKK+GMLIVQDQ+W RVT NR+ GK+T+Y
Sbjct  612  VSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWY  671

Query  661  YIDEFHLLLKEEQTAAYSVEIWKRFRKWGGIPTGITQNIKDLLSSREIENIFENSDYIYM  720
            + DEFHLLLKEEQTAAYS EIWKRFRKWGGIPTG TQN+KDLLSS EIENI+ENSD+I +
Sbjct  672  FADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITL  731

Query  721  LNQASGDRQILAKQLGISPHQLSYVTHSGEGEGLLFYGNVILPFVDHFPKSTELYRVMTT  780
            LNQASGDR+ILA +L +S +Q  Y+ +S  GEGLL++ NV+LPF + +P +T+LY++MTT
Sbjct  732  LNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTT  791

Query  781  KPQEVT  786
            + +EV+
Sbjct  792  RLNEVA  797

5) RHOM_01865 in NC_015977


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  869 bits (3290),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 497/788 (64%), Positives = 653/788 (83%), Gaps = 3/788 (0%)

Query  7    KKKLSRADKKQIEAAIARANRTDKKGKSAQDSIPYERMWPDGICRISDSHYTKTIQFQDI  66
            K KL+RA++K+I+A I R  + D +  +AQ+SIPYE M PDG+CR+S + ++K I+F DI
Sbjct  12   KTKLTRAQRKEIDAVI-RKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADI  70

Query  67   NYQLSQNEDKTAIFEGWCDFLNYFDSSIHFQLSFLNLAASEETFANSISIPPQRDAFDSI  126
            +YQL+Q + +TAIFE  CD+ NY D+SIH+Q+SFLN       +A+S+ I+PQ D FD I
Sbjct  71   SYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDI  130

Query  127  REEYTTMLQNQLARGNNGLIKTKYLTFGIDADSIKAAKPRLERIETDILNNFKRLGVAAR  186
            R EYT +LQ+QLA GNNG++KTKYLTF I+A+S+KAA++RL RI  D+L  FK +G  A+
Sbjct  131  RAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAH  190

Query  187  TLDGKERLFQLHAVFHMDEQLPFQFEWDWLAPSGLSTKDFIAPSSFEFRTGKQFRMGKKY  246
             +DG ERL  LH+V+H D ++ F+F+W WLAPSGLSTKDFIAPSS+ F  +K F MG KY
Sbjct  191  VMDGWERLNLLHGVYHPDGEI-FNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKY  249

Query  247  GAVSFLQILAPELNDRLLADFLDMESSLIVSMHIQSVDQVKAIKTVKRKITDLDRSKIEE  306
            GAVSFLQIL+PEL+D +LADFL+ ES+++V++H+Q+++Q KAIKT+KRKITDLD  KI E
Sbjct  250  GAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAE  309

Query  307  QKKAVRAGYDMDIIPSDLATYGSEAKKLLQDLQSRNERMFLLTFLVLNTADNPRQLGNNI  366
            QKKAVR+GYDMDI+PSDLATYG +AKKLL  LQ+RNER+F LTFLVLN AD  ++L N++
Sbjct  310  QKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDV  369

Query  367  FQAGSIAQKYNCQLTRLDFQQEEGLMSCLPLGLNQIEIQRGLTTSSTAIFVPFTTQELFQ  426
            FQA+++AQK NC L RLD+QQE+GL S LPLG+NQI IQR+LTTSS A+FVPF TQELFQ
Sbjct  370  FQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQ  429

Query  427  NGKEALYYGINALSNNLIMVDRKLLKNPNGLILGTPGSGKSFSAKREIANCFLLTSDDVI  486
             G  A+YYGINA S N+IM+DRK  + PN+L LGTPGSGKS S K EI + FL T+DD++
Sbjct  430  GG-AAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIF  488

Query  487  ICDPEAEYAPLVERLHGQVIKISPTSTNYINPMDLNLDYSDDESPLSLKSDFILSLCELI  546
            I DPEAEY PLV RLHGQVI++SPTS +++NP+D+NL+YS+D++PL+LKSDF+LS+CEL+
Sbjct  489  ISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELV  548

Query  547  VGGKEGLQPVQKTIIDRCVRLVYNEYLNDPKPENMPILEDLYNLLREQEEKEAQYIATAL  606
            +GGK+GL++++KT+IDR VR++Y  YL DP+PENMPIL DL + L +Q+  EA+ +A AL
Sbjct  549  MGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQAL  608

Query  607  EIYVTGSLNVFNHQSNVDIDNRIVCYDIKELGKQLKKIGMLVVQDQVWNRVTINRAAHKS  666
            ++YV+GSLNVFNH++NVDI+NR+V +DIKELGKQLKK+GML+VQDQ+W RVT NR+  K+
Sbjct  609  DLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKA  668

Query  667  TRYYIDEMHLLLKEEQTAAYTVEIWKRFRKWGGIPTGITQNVKDLLSSREVENIFENSDF  726
            T+Y+ DE HLLLKEEQTAAY+ EIWKRFRKWGGIPTG TQNVKDLLSS E+ENI+ENSDF
Sbjct  669  TWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDF  728

Query  727  VYMLNQAGGDRQILAKQLGISTHQLSYVTHSGEGEGLLFYGSTILPFVDHFPKNTELYRI  786
            + +LNQA+GDR+ILA +L +ST+Q  Y+ +S  GEGLL++ + +LPF + +P NT+LY+I
Sbjct  729  ITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKI  788

Query  787  MTTKPQEL  794
            MTT+ +E+
Sbjct  789  MTTRLNEV  796

6) CK5_22630 in NC_021022


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  867 bits (3283),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 518/796 (66%), Positives = 671/796 (85%), Gaps = 6/796 (0%)

Query  12   KNPVKRKLTRAEKKEIAAVIQAAKGDGKPRTAQQTIPYLQMYPDGICRVTEKKYSKSLVF  71
            ++  K KLTRA++KEI AVI+  KGDG+P+TAQQ+IPY  MYPDG+CRV+   +SK + F
Sbjct  8    RETEKTKLTRAQRKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEF  67

Query  72   EDINYQLAQADDKTAIFENWCDFLNYFDASVSVQLSFINQGARKEKAQAAIEIPAQDDAF  131
             DI+YQLAQ+D +TAIFE+ CD+ NY DAS+ +Q+SF+N+     +   ++EI++Q+D F
Sbjct  68   ADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDF  127

Query  132  NSIRREYADMLKNQLEKGNNGLEKCKYITFSIEADNLAAAKARLSRIETDVLNNFKVLGV  191
            + IR EY+++L++QL +GNNG+ K KY+TF+IEA+++ AA+ARL RI  D+L  FK +G 
Sbjct  128  DDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGA  187

Query  192  TARPMNGQERLNVLHGIFHPEGEPFRFSWDWLVPSGLTTKDFIAPSSFRFGDGRTFRMGR  251
             A+ M+G ERLN+LHG++HP+GE F F W WL PSGL+TKDFIAPSS+ FG+++TF MG 
Sbjct  188  VAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGG  247

Query  252  KLGAVSFLEILAPELNDRMLSDILDLENGIIVNLHIRSIDQSEAIKTIKRKITDLDKMKI  311
            K GAVSFL+IL+PEL+D ML+D+L+ E+G++VNLH+++I+Q+ AIKTIKRKITDLD MKI
Sbjct  248  KYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKI  307

Query  312  EEQKKAVRSGYDMDIIPSDLATFGSEAKNLLQDLQSRNERMFLLTFLVVNMADTKRKLDN  371
             EQKKAVRSGYDMDI+PSDLAT+G +AK+LL  LQ+RNER+F LTFLV+N+ADTK+KL+N
Sbjct  308  AEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNN  367

Query  372  DIFATAGFAQKNNCALTRLDYLQEAGFMSSIPLGENLIPIQRGLTTSSTAIFIPFITQEL  431
            D+F +AG AQK+NC+L RLDY QE G+ SS+PLG N I IQR+LTTSS A+F+PF+TQEL
Sbjct  368  DVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQEL  427

Query  432  FQRGAALYYGLNALSNNMILCDRKQLKNPNGLILGTPGSGKSFAAKREMTNAFLITDDDI  491
            FQ GAA+YYG+NA S NMI+ DRKQ + PN+L LGTPGSGKS + K E+ + FL T DDI
Sbjct  428  FQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDI  487

Query  492  IICDPEAEYFSLVQRLGGQVIRLSPAGKGMDGKPQYVNPMDINLNYSEDDNPLALKSDFI  551
            +I DPEAEY++LV+RL GQVIRLSP++K      ++VNP+DINLNYSEDDNPLALKSDF+
Sbjct  488  FISDPEAEYYPLVKRLHGQVIRLSPTSK------DFVNPLDINLNYSEDDNPLALKSDFV  541

Query  552  LSLCELVIGGKEGLQPVEKTVIDRAVRNVYRPFLADPDPAKMPILGDLYNELLKQPEPEA  611
            LS+CELV+GGK+GL+++EKTVIDRAVR +YRP+LADP P +MPIL+DL + LL Q  PEA
Sbjct  542  LSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPEA  601

Query  612  ARIAAALELYVSGSLNVFNHRTNVELSNRLVCFDIkqlgkqlkklgmlIVQDQVWNRVTV  671
             R+A AL+LYVSGSLNVFNHRTNV+++NRLV FDIK+LGKQLKKLGMLIVQDQ+W RVT 
Sbjct  602  DRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTA  661

Query  672  NRAEKKATRYYMDEFHLLLKEEQTAAYSVEIWKRFRKWGGIPTAITQNVKDLLSSREVEN  731
            NR++ KAT+Y+ DEFHLLLKEEQTAAYS EIWKRFRKWGGIPT+ TQNVKDLLSS E+EN
Sbjct  662  NRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIEN  721

Query  732  IFENSDFVLMLNQAQGDRAILAKQLNISPQQMKYVTHTEAGEGLIFYGNVVLPFIDRFPT  791
            I+ENSDF+ +LNQA GDR ILA +LN+S +Q KY+ ++E+GEGL+++ NVVLPF + +P 
Sbjct  722  ILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIPH  781

Query  792  DTELYCLLTTKPEEVS  807
            +T+LY ++TT+ +EV+
Sbjct  782  NTQLYKIMTTRLNEVA  797

7) DCF50_p28 in NC_018867


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  864 bits (3271),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 512/773 (67%), Positives = 649/773 (84%), Gaps = 2/773 (0%)

Query  1    MIARNKNNKKEKTAQDTIPFQKMYPDGICRVTDTLYTKTIRFHDINYQLAQNEDKTAIFE  60
            +I + K + +  TAQ++IP++ MYPDG+CRV+  +++K I F DI+YQLAQ + +TAIFE
Sbjct  26   VIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFE  85

Query  61   SWCDFLNYFDSSIHFQLSFLNMTANADDYESSISINPQQDDFDSIRSEYTEMLHSQLSKG  120
              CD+ NY D+SIH+Q+SFLN   ++ +Y  S+ I PQ DDFD IR+EYT +L+ QL++G
Sbjct  86   KLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANG  145

Query  121  NNGLMKTKYLTFGIEAENIKIAKPRLERIENDLRNGFKRLGATVDSLDGKERLKLCHNIL  180
            NNG++KTKYLTF IEAE++K A++RL RI  DL   FK +GA  + +DG ERL+L H + 
Sbjct  146  NNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVY  205

Query  181  RMDGNEPFHFDWKWLVPSGLSVKDFIAPSSFEFREGRVFRTGGKFGAVSFLQILAPELND  240
            + DG E F+FDWKWL PSGLS KDFIAPSS+ F +++ F  GGK+GAVSFLQIL+PEL+D
Sbjct  206  HPDG-EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSD  264

Query  241  RILADFLDIESNLLVTMHIQSVDQtkaiktikrkitDLDKMKIEEQKKAVRSGYDMDIIP  300
             +LADFL+ ES +LV +H+Q+++QTKAIKTIKRKITDLD MKI EQKKAVRSGYDMDI+P
Sbjct  265  DMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILP  324

Query  301  SDLATYGGEAKKLLADLQSRNERMFLMTFLILNTAETKQQLENTVFQASGIAQKHNCTLV  360
            SDLATYG +AKKLL+ LQ+RNER+F +TFL+LN A+TKQ+L+N VFQA+G+AQKHNC LV
Sbjct  325  SDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLV  384

Query  361  RLDYQQEQGFMSSLPLGLNQTVIQRSLTTSSTAIFVPFTTQELFQSSGEALYYGLNALSN  420
            RLDYQQEQG+ SSLPLG+NQ  IQRSLTTSS A+FVPF TQELFQ+ G A+YYG+NA S 
Sbjct  385  RLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQG-GAAMYYGINAKSR  443

Query  421  NLIMVDRKRLKNPNGLILGTPGSGKSFSAKREITNIFLITTDDIIICDPEAEYYPLVNRL  480
            N+IM+DRK+ + PN+L LGTPGSGKS S K EI ++FL T DDI+I DPEAEYYPLV+RL
Sbjct  444  NMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRL  503

Query  481  NGQVVKISPTSTDFVNPMDINLNYSEDDSPLSLKSDFILSLCELIVGGKEGLMPVEKSII  540
            +GQV+++SPTS DFVNP+DINLNYSEDD+PL+LKSDF+LS+CEL++GGK+GL ++EK++I
Sbjct  504  HGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVI  563

Query  541  DRCVRLIYADYLSDPVPEKMPILEDLYNALKEQDEKEAQHIRAALEIYVTGSLNVFNHRT  600
            DR VR+IY  YL+DP PE+MPIL DL +AL +Q+  EA+++  AL++YV+GSLNVFNHRT
Sbjct  564  DRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRT  623

Query  601  NVDIKNRLVCFDIKELGKQLKKLGMLVVQDQVWNRVTVNRSEKRSTRYYMDEFHLLLKEE  660
            NVDI NRLV FDIKELGKQLKKLGML+VQDQ+W RVT NRS+ ++T+Y+ DEFHLLLKEE
Sbjct  624  NVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEE  683

Query  661  QTAAYSVEIWKRFRKWGGIPTGITQNVKDLLSSREVENIFENSDFVYMLNQASGDRQILA  720
            QTAAYS EIWKRFRKWGGIPTG TQNVKDLLSS E+ENI+ENSDF+ +LNQASGDR+ILA
Sbjct  684  QTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILA  743

Query  721  KQLNISPHQLSYVTHSGEGEGLLFYGNVILPFTDKYPKDTELYRIMTTKPTEA  773
             +LN+S +Q  Y+ +S  GEGLL++ NV+LPFT+  P +T+LY+IMTT+  E 
Sbjct  744  ERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

8) Closa_3715 in NC_014376


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  849 bits (3214),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 477/790 (61%), Positives = 651/790 (83%), Gaps = 3/790 (0%)

Query  22   SHLSAAEQKQVQTVIDRARGDRTVPHSAQESIPFQRMFPDGICRVTDNYYTKTIQFQDIN  81
            + L+ A++K++++VI + +GD   PH+AQ+SIP++ M+PDG+CRV+   ++K I+F DI+
Sbjct  13   TKLTRAQRKEIDAVIRKYKGD-GRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADIS  71

Query  82   YQLAQQEDQTAIFEEWCSFLNFFDSSIRFELSFMNMATDASNFEKMVRIPYQKDHFNPVR  141
            YQLAQ + QTAIFE  C + N+ D+SI++++SF+N   D+ ++ K   I+ Q D+F+ +R
Sbjct  72   YQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIR  131

Query  142  TEYSTMLRRQLAQGNNGLTKTKYLTFGIEAESMKQAKPRLIHIEIDLMNNFKRLGVRAKL  201
            +EY+ +L++QLA+GNNG+ KTKYLTF IEAES+K A++RL +I +DL+  FK +G  A +
Sbjct  132  AEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHV  191

Query  202  LNGKERLHLMHDMFHMGDHDRFNFDWKWLPESGLSVKDFIAPTGFAFPKNRVFQMGGMYG  261
            ++G ERL+L+H+++H  D + FNFDWKWL+ SGLS KDFIAP+++ F + + F MGG YG
Sbjct  192  MDGWERLNLLHGVYH-PDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYG  250

Query  262  SMSYLQITASDLSDQLLKDFLDMESSQIVTMHIQSVDQNKAIKSIKHTITELDRSKIEEQ  321
            ++S+LQI +++LSD++L DFL+ ES+ +V +H+Q+++Q KAIK+IK+ IT+LD  KI EQ
Sbjct  251  AVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQ  310

Query  322  KKAVRSGYDMDIIPSDLATYGKDAKALLKELQSQNERMFLLTFLVMNTGETEQELEANVF  381
            KKAVRSGYDMDI+PSDLATYG DAK LL  LQ++NER+F LTFLV+N ++T Q L+ +VF
Sbjct  311  KKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVF  370

Query  382  QASSIAQKYNCNLRRLDFQQEQGLMSCLPLAQNLIEIQRSMTTSSTAIFVPFTTQELFQT  441
            QA+++AQK NC L RLD+QQEQGL S LPL+ N I IQRS+TTSS A+FVPF TQELFQ 
Sbjct  371  QAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQG  430

Query  442  GKEALYYGLNALSNNLIMVDRKKLKNPNGLILGTPGSGKSFSAKREIANAFLVTDDDVIV  501
            G  A+YYG+NA S N+IM+DRK+ + PN+L LGTPGSGKS S K EI + FL T DD+++
Sbjct  431  G-AAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFI  489

Query  502  CDPEAEYTALVQKFEGQVIKISPSSTQYINPMDINANYSEEDNPIALKADFILSLCELIV  561
             DPEAEY +LV++++GQVI++SP+S +++NP+DIN NYSE+DNP+ALK+DF+LS+CEL++
Sbjct  490  SDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVM  549

Query  562  GGKEGLQPVEKTVIDRCVHQIYQTYFEHPVPENMPVLQDLYEALLRQDEKEAHHVATALE  621
            GGK+GL+++EKTVIDR V+ IY+ Y+ +P PENMP+L DL  ALL Q+  EA++VA AL+
Sbjct  550  GGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALD  609

Query  622  IYVTGSLNLFNHRTNVDINNRLVCYDIKELGKQLKKIGMLVVQDQVWGRVTANRNAGKAT  681
            +YV+GSLN+FNHRTNVDI NRLV +DIKELGKQLKK+GML+VQDQ+WGRVTANR+ GKAT
Sbjct  610  LYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKAT  669

Query  682  RYYMDEFHLLLKEEQTAAYSVEIWKRFRKWGGIPTGITQNVKDLLSSREVTNIFENSDFI  741
            +Y+ DEFHLLLKEEQTAAYS EIWKRFRKWGGIPTG TQNVKDLLSS E+ NI+ENSDFI
Sbjct  670  WYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFI  729

Query  742  YMLNQAAGDRQILADQLNISPHQLSYVTHSGEGEGLLFYGNVILPFVDRFPTDLELYRIM  801
             +LNQA+GDR+ILA++LN+S +Q  Y+ +S  GEGLL++ NV+LPF + +P + +LY+IM
Sbjct  730  TLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIM  789

Query  802  TTKLTEVQEV  811
            TT+L EV  V
Sbjct  790  TTRLNEVAGV  799

9) OBV_30220 in NC_016048


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  847 bits (3208),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 482/766 (63%), Positives = 641/766 (84%), Gaps = 2/766 (0%)

Query  29   KKQSAQDSIPFQRMYPDGICKVADGRYTKTIQFQDINYQLNQNEDKTAIFESWCDFLNYF  88
            + ++AQ+SIP++ MYPDG+C+V+ G ++K I+F DI+YQL Q + +TAIFE  CD+ NY 
Sbjct  35   RPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYV  94

Query  89   DSSIPFQLSFLNLSAMQGSFARSVTIPPQGDGFDDLRAEYTQMLQNQFAKGNNGLVKTKY  148
            D+SI +Q+SFLN       +A+S  I+PQGD+FDD+RAEYT +LQ+Q+A+GNNG+VKTKY
Sbjct  95   DASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKY  154

Query  149  LTFGVSAESVRAAKPRLERVETDVLNNFKRLGVSAEGLNGAQRLKLMHDIFHMDDHEQFR  208
            LTF + AESV+AA++RL R+  D+L  FK +G  A+ ++G +RL+L+H+++H D+ E F 
Sbjct  155  LTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG-EIFN  213

Query  209  FSWDWLPHTGLGVKDFIAPSSFEFKNGNMCRIGQQYAAVSFLQILAPELNDRMLADILDM  268
            F W WL+ +GL+ KDFIAPSS+ F N++   +G +Y+AVSFLQIL+PEL+D MLAD+L+ 
Sbjct  214  FDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNT  273

Query  269  ESSLVVTMHIQSIDQVSAIKTIKRKITDLDKMKIEEQKKAVRAGYDMDIIPSDLATYGTE  328
            ES+++V +H+Q+I+Q  AIKTIKRKITDLD MKI EQKKAVR+GYDMDI+PSDLATYG +
Sbjct  274  ESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGED  333

Query  329  AKKLLQDLQSRNERMFLVTFLILNTADTKQQLDNNVFQASSIAQKYNCALTRLDYRQEEG  388
            AKKLL  LQ+RNER+F +TFL+LN ADTKQ+L+N+VFQA+++AQK NC+L RLDY+QE+G
Sbjct  334  AKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQG  393

Query  389  LMSSLPMGLNEIEIQRGLTTSSTAIFVPFTTQELFQTGREALYCGLNALSNNLIMVDRKL  448
            L SSLP+G+N+I IQR+LTTSS A+FVPF TQELFQ G  A+Y G+NA S N+IM+DRK 
Sbjct  394  LASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGG-AAMYYGINAKSRNMIMLDRKQ  452

Query  449  QKNPNGLILGTPGSGKSFSAKREIFNVFLVTNDDIIICDPESEYGALVRRLGGQVINISP  508
             + PN+L LGTPGSGKS S K EI +VFL T DDI+I DPE+EY +LV+RL GQVI +SP
Sbjct  453  ARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSP  512

Query  509  TSADFINPMDLNLNYSDDENPLSLKSDFILSLCELIVGGKDGLQPVEKTIIDRCVRLVYR  568
            TS DF+NP+D+NLNYS+D+NPL+LKSDF+LS+CEL++GGK+GL+++EKT+IDR VR++YR
Sbjct  513  TSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYR  572

Query  569  NYLNDPRPENMPVLGDLYDELRRQDEKEAQYIATALEIYVTGSLNVFNHRTNINISNRVV  628
             YL DPRPENMP+L+DL   L  Q+  EA+ +A AL++YV+GSLNVFNHRTN++I+NR+V
Sbjct  573  PYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLV  632

Query  629  SFDIKELGKQLKKIGMLIVQDAVWNRVTENRAEKKSTRYYIDEMHLLLREEQTAAYTVEI  688
            SFDIKELGKQLKK+GMLIVQD +W RVT NR++ K+T+Y+ DE HLLL+EEQTAAY+ EI
Sbjct  633  SFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEI  692

Query  689  WKRFRKWGGIPTGVTQNVKDLLSSREVENIFENSDYIYMLNQAAGDRQILAKQLNISPHQ  748
            WKRFRKWGGIPTG TQNVKDLLSS E+ENI+ENSD+I +LNQA+GDR+ILA +LN+S +Q
Sbjct  693  WKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQ  752

Query  749  LSYVTHSGEGEGLLFYGNIILPFVDRFPKDTQLYRVMTTKLSEAVE  794
              Y+ +S  GEGLL++ N++LPF + +P +TQLY++MTT+L+E   
Sbjct  753  QKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEVAG  798

10) CXIVA_10150 in NC_015737


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  837 bits (3168),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 481/797 (61%), Positives = 648/797 (82%), Gaps = 5/797 (0%)

Query  4    MQKKPAPRNVKLPANLTKSERKQVQRIVDLASKNDGVPRTAQQSIPFERMFPDGICRVGD  63
            M KK  PR+    ++LT+++RK+++ ++    K DG P+TAQQSIP+E M+PDG+CRV+ 
Sbjct  1    MSKKEIPRETE-KTKLTRAQRKEIDAVIR-KYKGDGRPHTAQQSIPYEVMYPDGVCRVSP  58

Query  64   NYYTRTVQFQDINYQLAQQEDKTAIFEEWCSFLNFFDSSIHFELSFMNMATDAESFEKSI  123
              +++ ++F DI+YQLAQ + +TAIFE  C + N+ D+SIH+++SF+N   D+  + KS+
Sbjct  59   GVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSF  118

Query  124  RIPPQKDGYNSVRAEYTQMLKTQLSQGNNGLTKTKYLTFGIEADSIKQAKPRLAHVMNDI  183
             I+PQ D+++ +RAEYT +L+ QL++GNNG+ KTKYLTF IEA+S+K A++RL ++  D+
Sbjct  119  EIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDL  178

Query  184  LNNFRQLGVMAKPLNGKERLKLMHDMFHMGEPEDRFRFDWKWLAKSGLSVKDFIAPTAFA  243
            L  F+ +G +A  ++G ERL+L+H+++H +   + F FDWKWLA SGLS KDFIAP+++ 
Sbjct  179  LGYFKSMGAVAHVMDGWERLNLLHGVYHPDG--EIFNFDWKWLAPSGLSTKDFIAPSSLC  236

Query  244  FPGSRYFQMGNLYGAMSYLAITASDLSDQLLKDFLDMESSQIVTMHIQSVDQTEAIKTVK  303
            F  ++ F MG  YGA+S+L I +++LSD++L DFL+ ES+ +V +H+Q+++QT AIKT+K
Sbjct  237  FGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIK  296

Query  304  HTITELDRSKIEEQKKAVRSGYDMDIIPSDLATYGKDAKALLQELQSQNERMFLITFLVM  363
            + IT+LD  KI EQKKAVRSGYDMDI+PSDLATYG DAK LL  LQ++NER+F +TFLV+
Sbjct  297  RKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVL  356

Query  364  NTGKTKQELETNVFQASSIAQKHNCMLRRLSYQQEDALMSCLPLAKNLIEIQRALTTSST  423
            N + TKQ L+ +VFQA+++AQKHNC L RL YQQE++L S LPL+ N I IQR+LTTSS 
Sbjct  357  NVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSV  416

Query  424  AIFVPFTTQELFQNRKEALYYGLNALSNNLIMVDRKALKNPNGLILGTPGSGKSFSAKRE  483
            A+FVPF TQELFQ    A+YYG+NA S N+IM+DRK  + PN+L LGTPGSGKS S K E
Sbjct  417  AVFVPFVTQELFQG-GAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSE  475

Query  484  IANAFLVTDDDIIICDPEAEYTALVQKFDGQVIHISPVSTQYINPMDINSNYSEEDNPVA  543
            I + FL T DDI+I DPEAEY +LV++++GQVI++SP S +++NP+DIN NYSE+DNP+A
Sbjct  476  IVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLA  535

Query  544  LKADFILSLCELIVGGKEGLQPVEKTVIDRCVHQIYQNYFNDPRPENMPLLEDLYFALLA  603
            LK+DF+LS+CEL++GGK+GL+++EKTVIDR V+ IY+ Y+ DPRPENMP+L DL  ALL 
Sbjct  536  LKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLD  595

Query  604  QEEKEAHHVATALEIYVKGSLNLFNHRTNVDIENRLVCYDIKELGKQLKKIGMLIVQDQV  663
            Q+  EA++VA AL++YV GSLN+FNHRTNVDI NRLV +DIKELGKQLKK+GMLIVQDQ+
Sbjct  596  QHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQI  655

Query  664  WGRVTANRSAGKATRYYMDEFHLLLKEEQTAAYSVEIWKRFRKWGGIPTGITQNVKDLLS  723
            WGRVTANRS GKAT+Y+ DEFHLLLKEEQTAAYS EIWKRFRKWGGIPTG TQNVKDLLS
Sbjct  656  WGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLS  715

Query  724  SHEVENIFENSDFIYMLNQAAGDRQILARQLNISTHQLSYVTHSGEGEGLLFYGNVILPF  783
            S E+ENI+ENSDFI +LNQA+GDR+ILA +LN+ST+Q  Y+ +S  GEGLL++ NV+LPF
Sbjct  716  SPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPF  775

Query  784  VDHFPTDLELYRIMTTK  800
             + +P + +LY+IMTT+
Sbjct  776  TNPIPHNTQLYKIMTTR  792

11) HMPREF0389_00238 in NC_016630


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  832 bits (3149),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 448/786 (57%), Positives = 648/786 (83%), Gaps = 3/786 (0%)

Query  28   ARLGRTEKQRLTLAVKKAKRDGKIPKSAQQTIAYQEIYPDGLCKVKDKLYTKTMQFSDIN  87
            ++L R++++ +   ++K K DG+ P +AQQ+I+Y+ +YPDG+C+V   +++K ++F+DI+
Sbjct  13   TKLTRAQRKEIDAVIRKYKGDGR-PHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADIS  71

Query  88   YQLARPEDKTQIFELWCDFFNYMDPSIKIQLSFVNEYVNRMDYEKSIDIPKREDGFDDVR  147
            YQLA+P+ +T IFE  CD++NY+D+SI IQ+SF+N  V+ ++Y KS++I+ + D+FDD+R
Sbjct  72   YQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIR  131

Query  148  KEYSEMLSAQLGKGNNGLIRKKYLTFGIYAEDMKTARLRLERIEADLIGNMKALGVKART  207
             EY+ +L  QL++GNNG+++ KYLTF I AE +K+AR RL RI  DL+G  K++G  A+ 
Sbjct  132  AEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHV  191

Query  208  LSGLERLKVLHNAFHPGGQEKLRFAWDSIVKTGLSTKDFISPSSFDFRDSKTFHMGSTLG  267
            + G ERL++LH  +HP+G E + F W  +  +GLSTKDFI+PSS+ F ++KTF MG+  G
Sbjct  192  MDGWERLNLLHGVYHPDG-EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYG  250

Query  268  AVSFVQIIAPELNDRMLSDLLNLDSASTVTFHIRSLNQAEAIKAVKRKLTDIEKGKIEEQ  327
            AVSF+QI++PEL+D ML+D+LN +S+  V +H+++++Q+ AIK++KRK+TD++  KI EQ
Sbjct  251  AVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQ  310

Query  328  KKAVRSGYDMDVLPPDLITYAQEAKNLLNSLQSHNERLFLVTMLIMNTSESRKKLENSIF  387
            KKAVRSGYDMD+LP+DL TY+++AK+LL  LQ++NERLF +T L++N +++++KL+N +F
Sbjct  311  KKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVF  370

Query  388  QTAGIVQKHNCSLKRLDFLQEQGLMSSLPIGENHIEIERSLTTSSIAIFIPFTTEELFMD  447
            Q+AG+ QKHNC+L RLD+ QEQGL SSLP+G N+I I+RSLTTSS+A+F+PF T+ELF +
Sbjct  371  QAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQG  430

Query  448  GESLYYGLNALSHNLIMADRKRLKNPNGLFLGVPGSGKSFAAKREIVNAFLITEDDVIIS  507
            G ++YYG+NA S+N+IM DRK+ + PN+L LG PGSGKS + K EIV+ FL T DD++IS
Sbjct  431  GAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFIS  490

Query  508  DPEAEYAPLVNRLGGQVVKLSPVSKHYVNPMDINPDYSDEEDPLTLKSDFILSLCELIVG  567
            DPEAEY PLV+RL GQV++LSP SK++VNP+DIN +YS++++PL+LKSDF+LS+CEL++G
Sbjct  491  DPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMG  550

Query  568  GKDGLQPVEKTIIDRCTRLVYRNYLTDPKPKNMPILGDLHALLKEQPEAEAARIATALEI  627
            GK+GL+++EKT+IDR  R++YR YL+DP+P NMPIL+DLH  L +Q  +EA R+A AL++
Sbjct  551  GKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDL  610

Query  628  YVTGSLNVFNHRTNVNLNNRLICYDIKELGKALKKIAMLILQDQVWNRVTLNRAAHKTTW  687
            YV+GSLNVFNHRTNV++ NRL+ +DIKELGK LKK++MLI+QDQ+W RVT NR+  K+TW
Sbjct  611  YVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATW  670

Query  688  FYQDEFHLMLKDEQTAAYSVEVWKRFRKWGGVPSGLTQNIKDLLASREIENIFENSDFIY  747
            ++ DEFHL+LK+EQTAAYS E+WKRFRKWGG+P+G TQN+KDLL+S EIENI+ENSDFI 
Sbjct  671  YFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFIT  730

Query  748  MLSQAAGDRAILAKQLGISPTQLSYVTHSNPGEGLLFYGNTIIPFVDHFPHN-HLYSIMT  806
            +L+QA+GDR ILA +L +S  Q  Y+ +S+PGEGLL++ N ++PF + +PHN +LY IMT
Sbjct  731  LLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMT  790

Query  807  TRPEDL  812
            TR +++
Sbjct  791  TRLNEV  796

12) EF2320 in NC_004668


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  827 bits (3131),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 483/799 (61%), Positives = 641/799 (81%), Gaps = 6/799 (0%)

Query  28   KATLRLTPDAKLNSRDKRRLAASVSKAKRDGRLPKTAQQTIPYQEMCRDGICIVGDRYFT  87
            K   R T  +KL   +++ + A + K K DGR P TAQQ+IPY+ M  DG+C V+   F+
Sbjct  4    KEIPRETEKTKLTRAQRKEIDAVIRKYKGDGR-PHTAQQSIPYEVMYPDGVCRVSPGVFS  62

Query  88   KQIQFYDVNYQLAQNEDKNLIFENYCDFLNYFDSSIKVQLSFLNQRADMEEYQKSIHIPE  147
            K I+F D++YQLAQ + +  IFE+ CD+ NY D+SI +Q+SFLN++ D  +Y KS++I+ 
Sbjct  63   KCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAP  122

Query  148  QTDAFNGIRREYSGMLKGQLARGNNGLTKTKYITFGIEADSLKEAKPRLERIEADVLANF  207
            Q D F++IR EY+G+L+ QLA GNNG+ KTKY+TF IEA+S+K A++RL RI  D+L+ F
Sbjct  123  QGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLGYF  182

Query  208  KVLGVRAHSLDGYERLAILHRMFHPADNQKFKFAWDAIW--KTGLSSKDFIAPDSFTFKS  265
            K +G  AH +DG ERL +LH ++HP D + F+F W   W   +GLS+KDFIAP S+ F +
Sbjct  183  KSMGAVAHVMDGWERLNLLHGVYHP-DGEIFNFDWK--WLAPSGLSTKDFIAPSSLCFGN  239

Query  266  GQYFQIGRTYGAVSFLQILAPELTDRMLADFLDLENSMVVTLHIQSIDQSAAIKNIKRKI  325
            ++ F +G  YGAVSFLQIL+PEL+D MLADFL+ E++++V LH+Q+I+Q+ AIK IKRKI
Sbjct  240  AKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKI  299

Query  326  TDLDRMKIEEQKKAVRAGYDMDIIPSDLATFGSEAKTLLEDLQSRNERMFLVTLLVMNHA  385
            TDLD MKI EQKKAVR+GYDMDI+PSDLAT+G +AK LL  LQ+RNER+F +T+LV+N A
Sbjct  300  TDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVA  359

Query  386  RTRQKLENNIFQAAGIAQKYNCALRRLDYQQEQGLMSSLPLGLNQIAIQRGLTTSSTAIF  445
             T+QKL+N++FQAAG+AQK NC+L RLDYQQEQGL SSLPLG+NQI IQR+LTTSS A+F
Sbjct  360  DTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVF  419

Query  446  VPFTTQELFMNGEALYYGLNALSNNLIMADRKKLKNPNGLILGTPGSGKSFSAKREITNA  505
            VPF TQELF  G A+YYG+NA S N+IM DRK+ + PN+L LGTPGSGKS S K EI + 
Sbjct  420  VPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSV  479

Query  506  FLITQDDIAIIDPEQEYSPLVQRLGGQVIDISPASDQYINPMDLTLNYSEDDNPLTLKSD  565
            FL T DDI I DPE EY PLV+RL GQVI +SP+S +++NP+D+ LNYSEDDNPL+LKSD
Sbjct  480  FLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSD  539

Query  566  FILSLMELIVGGKAGLEPVEKTVVDRCVHMVYRDYLQDPKPEKMPVLGDLYRLLREQPEA  625
            F+LS+ EL++GGK GLE++EKTV+DR V+++YR YL DP+PE+MP+L+DL + L +Q  +
Sbjct  540  FVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVP  599

Query  626  EAQRLATALEIYVTGSLNVFNHQTNVEIKSRIVCYVIKNLGKQLKKFGMQVVQDQVWGRV  685
            EA+R+A AL++YV+GSLNVFNH+TNV+I +R+V + IK+LGKQLKK+GM +VQDQ+WGRV
Sbjct  600  EADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRV  659

Query  686  SENREAHKSTRLYIDEMHLLLREEQTAAYTVEIWKRFRKWGGIPTGITQNVKDLLASREI  745
            + NR   K+T+ + DE HLLL+EEQTAAY+ EIWKRFRKWGGIPTG TQNVKDLL+S EI
Sbjct  660  TANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEI  719

Query  746  ANIFENSDFIYMLNQAGGDRQILAKQLNISPHQLGYVTNSNAGEGLLFYGNVIIPFVDHF  805
             NI+ENSDFI +LNQA+GDR+ILA +LN+S +Q  Y+ NS++GEGLL++ NV++PF + +
Sbjct  720  ENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPI  779

Query  806  PKDTELYSIMTTRPEDLAE  824
            P +T+LY IMTTR +++A 
Sbjct  780  PHNTQLYKIMTTRLNEVAG  798

13) CK1_03230 in NC_021014


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  823 bits (3116),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/764 (64%), Positives = 630/764 (83%), Gaps = 2/764 (0%)

Query  54   PTTAQQSIPYIRMLQDGICQVTKTFFSKTIQFYDINYQLALNEDKTTIFENYCDFLNYFD  113
            P TAQQSIPY  M  DG+C+V+   FSK I+F DI+YQLA  + +T+IFE+ CD+ NY D
Sbjct  36   PHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVD  95

Query  114  SSISVQLSFINQQVDVAEFEKSIDIPDQNDDFNAIREEYRIMLKNQLSKGNNGLVKTKYI  173
            +SI +Q+SF+N++VD  ++ KS++I+ Q DDF+ IR EY  +L++QL++GNNG+VKTKY+
Sbjct  96   ASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYL  155

Query  174  TFGIEAESLKVARPRLERIETDILNNFKVLGAQAHSLNGLERLEILYHVFNQDRIEPFKF  233
            TF IEAES+K AR+RL RI  D+L  FK +GA AH ++G ERL++L  V++ D  E F+F
Sbjct  156  TFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPD-GEIFNF  214

Query  234  QYKMLPETGLKTKDFIAPTSFNFSKNQTFLMGRTMGSVSYLQILAPELTDRMLADFLDVD  293
            + K L+ +GL TKDFIAP+S+ F++ +TF MG   G+VS+LQIL+PEL+D MLADFL+ +
Sbjct  215  DWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTE  274

Query  294  DSINVNIHIQSIDQssaikmikskisDLDKMKIEEQKRAVRSGYDMDVLPSDLVTYGEEA  353
             ++ VN+H+Q+I+Q+ AIK IK KI+DLD MKI EQK+AVRSGYDMD+LPSDL TYGE+A
Sbjct  275  SGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDA  334

Query  354  KNLLEDLQSRNERMFLVTVLVMNTAKKRQKLDNNIFQVQGIAQKYNCSLKQLDYQQEAAL  413
            K+LL  LQ+RNER+F +T LV+N A  +QKL+N++FQ  G+AQK NC+L +LDYQQE +L
Sbjct  335  KKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGL  394

Query  414  MSCIPLGVNRIEIQRGLTTSSTAIFVPFTTQELFQEGEALYYGLNALSNNMIMVDRKRLK  473
             S +PLGVN+I IQR+LTTSS A+FVPF TQELFQ G A+YYG+NA S NMIM+DRK+ +
Sbjct  395  ASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQAR  454

Query  474  NPNGLILGTPGSGKSFSAKREITNCFLITEDDIIICDPEAEYSPLVQALHGQVVRVSPVS  533
             PN+L LGTPGSGKS S K EI + FL T DDI+I DPEAEY PLV+ LHGQV+R+SP S
Sbjct  455  CPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTS  514

Query  534  DQYINPMDLNLNYSEEDNPLSLKADFILSLCELIVGGKNGLEPVEKTIIDRCVRLVYQEY  593
             +++NP+D+NLNYSE+DNPL+LK+DF+LS+CEL++GGKNGLE++EKT+IDR VR++Y+ Y
Sbjct  515  KDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPY  574

Query  594  LADPVPEKMPILEDLYNLLRKQEEPEAQRLATSLEIYVTGSLNVFNHQTNVDINNRIVCF  653
            LADP PE+MPIL DL + L  Q+ PEA+R+A +L++YV+GSLNVFNH+TNVDI NR+V F
Sbjct  575  LADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSF  634

Query  654  DIKELGKQLKKIGMLVIQDQVWNRVTMNRSAHKSTRYYVDEFHLLLKEEQTAAYSVEIWK  713
            DIKELGKQLKK+GML++QDQ+W RVT NRS  K+T+Y+ DEFHLLLKEEQTAAYS EIWK
Sbjct  635  DIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWK  694

Query  714  RFRKWGGIPTGITQNIKDLLSSREIENIFENSDFIYMLNQASGDRQILAKQLNISPTQLS  773
            RFRKWGGIPTG TQN+KDLLSS EIENI+ENSDFI +LNQASGDR+ILA +LN+S  Q  
Sbjct  695  RFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQK  754

Query  774  YVTNSNEGEGLLFYGNVIIPFVDRFPKNS-LYKIMTTRLEETSE  816
            Y+ NS+ GEGLL++ NV++PF + +P N+ LYKIMTTRL+E + 
Sbjct  755  YIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEVAG  798

14) EUBREC_3574 in NC_012781


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  814 bits (3083),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 478/752 (64%), Positives = 621/752 (83%), Gaps = 2/752 (0%)

Query  1    MLQDGICQVTKTFFSKTIQFYDINYQLALNEDKTTIFENYCDFLNYFDSSISVQLSFINQ  60
            M  DG+C+V+   FSK I+F DI+YQLA  + +T+IFE+ CD+ NY D+SI +Q+SF+N+
Sbjct  48   MYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNR  107

Query  61   QVDVAEFEKSIDIPDQNDDFNAIREEYRTMLKNQLSKGNNGLVKTKYITFGIEAESLKVA  120
            +VD  ++ KS++I+ Q DDF+ IR EY  +L++QL++GNNG+VKTKY+TF IEAES+K A
Sbjct  108  KVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAA  167

Query  121  RPRLERIEADILNNFKVLGAQAHSLNGLERLEILYHVFNQDRIEPFKFQYKMLPETGLKT  180
            R+RL RI  D+L  FK +GA AH ++G ERL++L  V++ D  E F+F+ K L+ +GL T
Sbjct  168  RARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPD-GEIFNFDWKWLAPSGLST  226

Query  181  KDFIAPTSFNFSKNQTFLMGKTMGSVSYLQILAPELTDRMLADFLDVDDSINVNIHIQSI  240
            KDFIAP+S+ F++ +TF MG   G+VS+LQIL+PEL+D MLADFL+ + ++ VN+H+Q+I
Sbjct  227  KDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAI  286

Query  241  DQssaikmikskisDLDKMKIEEQKRAVRSGYDMDVLPSDLVTYGEEAKNLLEDLQSRNE  300
            +Q+ AIK IK KI+DLD MKI EQK+AVRSGYDMD+LPSDL TYGE+AK+LL  LQ+RNE
Sbjct  287  EQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNE  346

Query  301  RMFLVTVLVMNTAKKRQKLDNNIFQVQGIAQKYNCSLKQLDYQQEAALMSCIPLGVNRIE  360
            R+F +T LV+N A  +QKL+N++FQ  G+AQK NC+L +LDYQQE +L S +PLGVN+I 
Sbjct  347  RLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIK  406

Query  361  IQRGLTTSATAIFVPFTTQELFQEGEALYYGLNALSNNMIMVDRKRLKNPNGLILGTPGS  420
            IQR+LTTS+ A+FVPF TQELFQ G A+YYG+NA S NMIM+DRK+ + PN+L LGTPGS
Sbjct  407  IQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGS  466

Query  421  GKSFSAKREITNCFLITEDDIIICDPEAEYYPLVQALHGQVIRISPVSDQYINPMDLNLN  480
            GKS S K EI + FL T DDI+I DPEAEYYPLV+ LHGQVIR+SP S +++NP+D+NLN
Sbjct  467  GKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLN  526

Query  481  YSEEDNPLSLKADFILSLCELIVGGKNGLEPVEKTIIDRCVRLVYQEYLADPVPEKMPIL  540
            YSE+DNPL+LK+DF+LS+CEL++GGKNGLE++EKT+IDR VR++Y+ YLADP PE+MPIL
Sbjct  527  YSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPIL  586

Query  541  EDLYNLLRKQEEPEAQRLATSLEIYVTGSLNVFNHRTNVDINNRIVCFDIKELGKQLKKI  600
             DL + L  Q+ PEA+R+A +L++YV+GSLNVFNHRTNVDI NR+V FDIKELGKQLKK+
Sbjct  587  SDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKL  646

Query  601  GMLIVQDQVWNRVTINRSAHKSTRYYVDEFHLLLKEEQTAAYSVEIWKRFRKWGGIPTGI  660
            GMLIVQDQ+W RVT NRS  K+T+Y+ DEFHLLLKEEQTAAYS EIWKRFRKWGGIPTG 
Sbjct  647  GMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGA  706

Query  661  TQNIKDLLASREIENIFENSDFIYMLNQASGDRQILAKQLNISPTQLSYVTNSNEGEGLL  720
            TQN+KDLL+S EIENI+ENSDFI +LNQASGDR+ILA +LN+S  Q  Y+ NS+ GEGLL
Sbjct  707  TQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLL  766

Query  721  FYGNVIIPFVDRFPKNS-LYKIMTTRPEETAE  751
            ++ NV++PF + +P N+ LYKIMTTR +E A 
Sbjct  767  IFENVVLPFTNPIPHNTQLYKIMTTRLNEVAG  798

15) FP2_22350 in NC_021042


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  804 bits (3045),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 465/765 (61%), Positives = 624/765 (82%), Gaps = 2/765 (0%)

Query  29   PRTAQQSIPMQRMFEDGTCRVKANYYTRTIQYQDINYQLAQQEDKTAIFEEWCSFLNFFD  88
            P+TAQQSIP + M+ DG CRV +  +++ I++ DI+YQLAQ + +TAIFE  C + N+ D
Sbjct  36   PHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVD  95

Query  89   SSIKFELSFVNMATDSTEFEKSIRIPYQKDGFDDVRAEYSQMLRQQLAKGNNGLTKTKFI  148
            +SI +++SF+N   D+ ++ KS+ I+ Q D+FDD+RAEY+ +L++QLA+GNNG+ KTK++
Sbjct  96   ASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYL  155

Query  149  TFGVEGESMAQVKPRLDHIQNDLLNNFHRLGVQAKPLNGVQRLKLMHDMFNMDGASKFHF  208
            TF +E+ES+   ++RL +I  DLL  F  +G  A  ++G +RL+L+H++++ DG   F+F
Sbjct  156  TFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGEI-FNF  214

Query  209  DWKDLVKSGLSVKDAIAPTAFAFKNSRTFQMGGIFCAASFLSITASDISDQLLKDFLDMD  268
            DWK L  SGLS KD IAP+++ F N++TF MGG + A SFL I ++++SD++L DFL+ +
Sbjct  215  DWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTE  274

Query  269  SSQIVTMHIQSVDQNKAIKTVKRTITELDRSTIEEQKKAIRSGYDIDILPSDLKTYGRDA  328
            S+ +V +H+Q+++Q KAIKT+KR IT+LD   I EQKKA+RSGYD+DILPSDL TYG DA
Sbjct  275  SGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDA  334

Query  329  KALLKELQSQNERMFLVTFLVLNTGRTEQELENNVFQASSIAQKHNCNLCRLDYQQEQGL  388
            K LL  LQ++NER+F +TFLVLN + T Q L+N+VFQA+++AQKHNC L RLDYQQEQGL
Sbjct  335  KKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGL  394

Query  389  MSSLPLADCQIEIQRGLTTSSTAIFIPFTTQELYQSGKESLYYGLNALSNNLIMVDRKKL  448
             SSLPL+  QI IQR+LTTSS A+F+PF TQEL+Q+G  ++YYG+NA S N+IM+DRK+ 
Sbjct  395  ASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGG-AAMYYGINAKSRNMIMLDRKQA  453

Query  449  KNPNGLILGTPGSGKSFSAKREIANAFLVTDDDIIVNDPEGEYSPLVNRLKGQVIKISPN  508
            + PN+L LGTPGSGKS S K EI + FL T DDI+++DPE+EY PLV+RL GQVI++SP 
Sbjct  454  RCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPT  513

Query  509  STQFINPMDINANYSEEDNPLSLKADFILSLCELVVGGKEGLLPVEKTVIDRCVHLIYRK  568
            S +F+NP+DIN NYSE+DNPL+LK+DF+LS+CELV+GGK+GL ++EKTVIDR V++IYR 
Sbjct  514  SKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRP  573

Query  569  YFADPCPENMPILEDLYNALLQQDEKEAHHVATALEIYVKGSLNLFNHRTNVNVNNRIVC  628
            Y+ADP PENMPIL DL +ALL+Q+  EA++VA AL++YV GSLN+FNHRTNV++ NR+V 
Sbjct  574  YLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVS  633

Query  629  YDIKELGKQMKKLGMLIVQDQVWGRVTANRSSGKSTRYYMDEMHLLLKEEQTAAYSVEIW  688
            +DIKELGKQ+KKLGMLIVQDQ+WGRVTANRS GK+T+Y+ DE HLLLKEEQTAAYS EIW
Sbjct  634  FDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIW  693

Query  689  KRFRKWGGIPTGLTQNVKDLLSSREVENIFENSDMIIMLNQAAGDRQILAKQLNISPHQL  748
            KRFRKWGGIPTG TQNVKDLLSS E+ENI+ENSD I +LNQA+GDR+ILA +LN+S +Q 
Sbjct  694  KRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQ  753

Query  749  SYVTHSGEGEGLLFFGNVILPFVDRFPTDLELYRIMTTKLGEVSE  793
             Y+ +S  GEGLL+F NV+LPF + +P + +LY+IMTT+L EV+ 
Sbjct  754  KYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEVAG  798

16) FP2_21750 in NC_021042


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  798 bits (3022),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 478/766 (63%), Positives = 631/766 (83%), Gaps = 2/766 (0%)

Query  20   PRTAQESIPFQRMFEDGTCRVRPGYYTRTIQYQDINYQLAQQEDKTAIFEEWCSFLNFFD  79
            P+TAQ+SIP++ M+ DG CRV PG +++ I++ DI+YQLAQ + +TAIFE  C + N+ D
Sbjct  36   PHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVD  95

Query  80   SSIHFELSFVNTATDSADFEKSIRIPYQQDGFDDVRAEYSQMLRQQLSKGNNGLTKTKFL  139
            +SIH+++SF+N   D+ ++ KS+ I+ Q D+FDD+RAEY+ +L++QL++GNNG+ KTK+L
Sbjct  96   ASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYL  155

Query  140  TYGIEGDSMEQVKPRLEHIQNDLMNNFHRLGVLAKPLDGTERLRLMHGMLNMDGANKFHF  199
            T+ IE++S+   ++RL +I  DL+  F  +G +A  +DG ERL L+HG+ + DG + F+F
Sbjct  156  TFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG-EIFNF  214

Query  200  NWKDLVPSGLSVKDAIAPTALAFKNSRTFQMGGIFGAVSFLNITASDLSDQLLKDFLDMD  259
            +WK L PSGLS KD IAP++L F N++TF MGG +GAVSFL+I +++LSD++L DFL+ +
Sbjct  215  DWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTE  274

Query  260  SSQIVTMHIQSVDQNKAIKTIKHTITELDRSKIEEQKKAVRAGYDMDVLPSDLATYGRDA  319
            S+ +V +H+Q+++Q KAIKTIK+ IT+LD  KI EQKKAVR+GYDMD+LPSDLATYG DA
Sbjct  275  SGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDA  334

Query  320  KALLKELQSQNERMFLVTFLVLNTGKTEQELETNVFQAVSIAQKHNCELCRLDFQQEQGL  379
            K LL  LQ++NER+F +TFLVLN + T Q L+ +VFQA ++AQKHNC L RLD+QQEQGL
Sbjct  335  KKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGL  394

Query  380  MSSLPLADCQIEIQRGLTTSSTAIFVPFTTQELFDNGKESLYYGLNALSNNLIMVDRKKL  439
             SSLPL+  QI IQR+LTTSS A+FVPF TQELF+ G  ++YYG+NA S N+IM+DRK+ 
Sbjct  395  ASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGG-AAMYYGINAKSRNMIMLDRKQA  453

Query  440  KNPNGLILGTPGSGKSFSAKREICNAFLVTdddiiiADPEAEYAPLVERLHGQVIHISPA  499
            + PN+L LGTPGSGKS S K EI + FL T DDI+I+DPEAEY PLV RLHGQVI++SP+
Sbjct  454  RCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPT  513

Query  500  STQYINPMDINSNYSEEDNPLALKADFVLSLCELVVGGKEGLQPVEKTVIDRCVHVIYRK  559
            S +++NP+DIN NYSE+DNPLALK+DFVLS+CELV+GGK+GL+++EKTVIDR V+VIYR 
Sbjct  514  SKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRP  573

Query  560  YFENPLPENMPLLEDLYNALLTQDEPEARHVAAALEIYVKGSLNIFNHHTNVDINNRIVC  619
            Y+ +P PENMP+L DL +ALL Q+ PEA +VA AL++YV GSLN+FNH+TNVDI NR+V 
Sbjct  574  YLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVS  633

Query  620  FDIkqlgkqlkklgmlIVQDAVWGRVTANREAGKSTRYFVDEFHLLLKEEQTAAYSVEIW  679
            FDIK+LGKQLKKLGMLIVQD +WGRVTANR  GK+T+YF DEFHLLLKEEQTAAYS EIW
Sbjct  634  FDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIW  693

Query  680  KRFRKWGGIPTGLTQNCKDLLSSPEVSNIFENSDMIIMLNQANGDRQILAKQLNISPHQL  739
            KRFRKWGGIPTG TQN KDLLSSPE+ NI+ENSD I +LNQA+GDR+ILA +LN+S +Q 
Sbjct  694  KRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQ  753

Query  740  SYVTHSGSGEGLLFYGNTILPFVDHFPHDLELYKIMTTKLSEVTGA  785
             Y+ +S +GEGLL++ N +LPF + +PH+ +LYKIMTT+L+EV+G 
Sbjct  754  KYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEVAGV  799

17) SEQ_1263 in NC_012471


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  722 bits (2730),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 407/768 (53%), Positives = 591/768 (77%), Gaps = 4/768 (0%)

Query  39   FMKEEKKETVQDTIPYKRMLKDGICQIEKNKFNKTIRFLDINYRLMEEIDQEGIFSEFSS  98
            +  + + +T Q++IPY  M  DG+C++    F+K I F DI+Y+L +   Q +IF  +  
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  99   FLNFFDSSVEVEFSYINSIGENEEINKLIDIKENIDDFNEIRNEYRQMLLNQSSKGNNGL  158
            + N+ D+S++++FS++N   +  +  K ++I  + DDF++IR EY  +L +Q ++GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  159  SKSMYITFTIEAEDLKQAKSRLERMEMDVLNNFKQMGVKAYVLDGEERLKTIHDILNPND  218
             K+ Y+TFTIEAE +K A++RL R+  D+L  FK MG  A V+DG ERL+ +H++ +P++
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  219  KLVFSFED--LKYSGLTTKEYIVPPSFNFSKPTYFKTGEVFAEVNFLQLLASDIKDEMLS  276
              +F+F+   L  SGL+TK++I P+S+ F+++  F  G  ++ V+FLQ+L++++ D+ML+
Sbjct  210  E-IFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLA  268

Query  277  EFLALEENMIVTFHIRAIDQMEAIKHVKRKITDLDKMKLEENKKAIRAGYDMDILPSDLV  336
            +FL  E  ++V +H++AI+Q  AIK +KRKITDLD MK+ E+KKA+R+GYDMDILPSDL 
Sbjct  269  DFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLA  328

Query  337  TYGAEAKNLLSELQNHDEKMFLITILFMNTSKSKGKLDNTVFTLKSIANRHNCSLKNLNY  396
            TYG +AK+LL+ LQ ++E++F +T+L +N + +K KL+N VF   ++A++HNC+L  L+Y
Sbjct  329  TYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDY  388

Query  397  RQEQGLVASLPLGINEVEIERGLTTSAAAIFIPFTTEELFIKGESLYYGLNALSRNIIMA  456
            +QEQGL +SLPLG+N++ I+R+LTTS+ A+F+PF T+ELF  G ++YYG+NA SRN+IM 
Sbjct  389  QQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIML  448

Query  457  DRKKLKNPNGLILGTPGSGKSFAAKREITNAFLitdddiiiadPEAEYSPLVEALKGQVI  516
            DRK+ + PN+L LGTPGSGKS + K EI + FL T DDI+I+DPEAEY PLV  L GQVI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  517  RISPISKDYVNPLDINIDYADEDNPLSLKSDFILSLFELVVGEKK-LSAEEISVIDRCLP  575
            R+SP SKD+VNPLDIN++Y+++DNPL+LKSDF+LS+ ELV+G K+ L A E +VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  576  ILYKTYFENPVPENMPILEDLYNLLQKQEEIVGKKLAVEMEIYVKGSLNVFNHRTNVDTN  635
            ++Y+ Y+ +P PENMPIL DL + L  Q+   + ++A  +++YV GSLNVFNHRTNVD  
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  636  NRVVCYDIKELGKQLKKIGMLVVQDQVWNRVTINRASKKATRYYVDEFHLLLKEPQTANY  695
            NR+V +DIKELGKQLKK+GML+VQDQ+W RVT NR+  KAT+Y+ DEFHLLLKE QTA Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  696  SIEIWKRFRKWGGMPTGLTQNIKDLLASPEIENIFDNTDFILMLNQAGTDRDILAKKLNI  755
            S EIWKRFRKWGG+PTG TQN+KDLL+SPEIENI++N+DFI +LNQA+ DR ILA +LN+
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  756  SKHQLSYVTNSGEGEGLIFYGNTIVPFIDQFPKNTKLYSLITTKPEEV  803
            S +Q  Y+ NS  GEGL+++ N ++PF + +P NT+LY ++TT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

18) HMPREF0389_00184 in NC_016630


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  707 bits (2674),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 405/769 (53%), Positives = 596/769 (78%), Gaps = 4/769 (0%)

Query  56   FMKEEKKETVQDTIPYKRMLKDGICQIEKNKFNKTIRFLDINYRLMEEADQesifsefss  115
            +  + + +T Q++IPY  M  DG+C++    F+K I F DI+Y+L +   Q +IF  +  
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  116  flnffnssVEVEFSYINSIGENEEISKLIDIKENMDDFNEIRNEYRQMLLNQSSKGNNGL  175
            + N+ ++S++++FS++N   +  + +K ++I  + DDF++IR EY  +L +Q ++GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  176  SKSMYLTFTIEAEDLKQAKSRLERMEMDVLNNFKQMGVKAYVLDGEERLKVIHDILNPND  235
             K+ YLTFTIEAE +K A++RL R+  D+L  FK MG  A V+DG ERL+++H++ +P++
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  236  KLVFSFED--LKYSGLTTKEYIVPPSFNFSKPTYFKSGEVFAEVNFLQLLASDIKDEMLS  293
              +F+F+   L  SGL+TK++I P+S+ F+++  F  G  ++ V+FLQ+L++++ D+ML+
Sbjct  210  E-IFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLA  268

Query  294  EFLALEENMVVTFHIKAIDQMEAIKNVKRKITDLDKMKLEENKKAIRAGYDIDILPSDLV  353
            +FL  E  ++V +H++AI+Q  AIK +KRKITDLD MK+ E+KKA+R+GYD+DILPSDL 
Sbjct  269  DFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLA  328

Query  354  TYGTEAKNLLSELQNHDEKMFLVTILFMNMSKSKGKLDNTVFTLKSIANRHNCSLKNLNY  413
            TYG +AK+LL+ LQ ++E++F +T+L +N++ +K KL+N VF   ++A++HNC+L  L+Y
Sbjct  329  TYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDY  388

Query  414  RQEQGLVASLPLGINEVEIERGLTTSAAAIFIPFTTEELFIKGESLYYGLNALSRNIIMA  473
            +QEQGL +SLPLG+N++ I+R+LTTS+ A+F+PF T+ELF  G ++YYG+NA SRN+IM 
Sbjct  389  QQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIML  448

Query  474  DRKKLKNPNGLILGTPGSGKSFAAKREITNAFLitdddiiiadPEAEYAPLVGALKGQVI  533
            DRK+ + PN+L LGTPGSGKS + K EI + FL T DDI+I+DPEAEY PLV  L GQVI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  534  KISPISKDYVNPLDINIDYADEDNPLSLKSDFILSLFELVVGEKK-LSAEEISVIDRCLP  592
            ++SP SKD+VNPLDIN++Y+++DNPL+LKSDF+LS+ ELV+G K+ L A E +VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  593  ILYKAYFENPVSENMPILEDLYNLLQKQEETVGKKLAVEMEIYVKGSLNVFNHRTNVDTN  652
            ++Y++Y+ +P +ENMPIL DL + L  Q+   + ++A  +++YV GSLNVFNHRTNVD  
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  653  NRVVCYDIKELGKQLKKIGMLVVQDQVWNRVTINRASKKATRYYVDEFHLLLKEPQTANY  712
            NR+V +DIKELGKQLKK+GML+VQDQ+W RVT NR+  KAT+Y+ DEFHLLLKE QTA Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  713  SIEIWKRFRKWGGMPTGLTQNIKDLLASPEIENIFDNTDFILMLNQAGTDRDILAKKLNI  772
            S EIWKRFRKWGG+PTG TQN+KDLL+SPEIENI++N+DFI +LNQA+ DR ILA +LN+
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  773  SKHQLSYVTNSGEGEGLLFYGNTIVPFIDQFPKNTKLYSLITTKLSETG  821
            S +Q  Y+ NS  GEGLL++ N ++PF + +P NT+LY ++TT+L+E +
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEVA  797

19) SANR_1310 in NC_022239


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  706 bits (2671),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 404/768 (53%), Positives = 595/768 (78%), Gaps = 4/768 (0%)

Query  39   FMKEEKKETVQDTIPYKRMLKDGICQIEKNKFNKTIRFLDINYRLMEEADQesifsefss  98
            +  + + +T Q++IPY  M  DG+C++    F+K I F DI+Y+L +   Q +IF  +  
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  99   flnffnssVEVEFSYVNSIGENDEISKLIDIKENIDDFNEIRNEYRQMLLNQSSKGNNGL  158
            + N+ ++S++++FS++N   +  + +K ++I  + DDF++IR EY  +L +Q ++GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  159  SKSMYLTFTIEAEDLKQAKSRLERMEMDVLNNFKQMGVKAYVLDGEERLKVIHDILNPND  218
             K+ YLTFTIEAE +K A++RL R+  D+L  FK MG  A V+DG ERL+++H++ +P++
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  219  KLVFSFED--LKYSGLTTKEYIVPPSFNFSKPTYFKSGEVFAEVNFLQLLVSDIKDEMLS  276
              +F+F+   L  SGL+TK++I P+S+ F+++  F  G  ++ V+FLQ+L +++ D+ML+
Sbjct  210  E-IFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLA  268

Query  277  EFLALEENMVVTFHIKAIDQMEAIKNVKRKITDLDKMKLEENKKAIRAGYDIDILPSDLV  336
            +FL  E  ++V +H++AI+Q  AIK +KRKITDLD MK+ E+KKA+R+GYD+DILPSDL 
Sbjct  269  DFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLA  328

Query  337  TYGTEAKNLLSELQNHDEKMFLVTILFMNMSKSKGKLDNTVFTLKSIANRHNCSLKNLNY  396
            TYG +AK+LL+ LQ ++E++F +T+L +N++ +K KL+N VF   ++A++HNC+L  L+Y
Sbjct  329  TYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDY  388

Query  397  RQEQGLVASLPLGINEVEIERGLTTSAAAIFIPFTTEELFIKGESLYYGLNALSRNIIMA  456
            +QEQGL +SLPLG+N++ I+R+LTTS+ A+F+PF T+ELF  G ++YYG+NA SRN+IM 
Sbjct  389  QQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIML  448

Query  457  DRKKLKNPNGLILGTPGSGKSFAAKREITNAFLitdddiiiadPEAEYAPLVEALKGQVI  516
            DRK+ + PN+L LGTPGSGKS + K EI + FL T DDI+I+DPEAEY PLV  L GQVI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  517  KISPISKDYVNPLDINIDYADEDNPLSLKSDFILSLFELVVGEKK-LSAEEISVIDRCLP  575
            ++SP SKD+VNPLDIN++Y+++DNPL+LKSDF+LS+ ELV+G K+ L A E +VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  576  ILYKAYFENPTPENMPVLEDLYNLLQKQEETVGKKLAVEMEIYVKGSLNVFNHRTSVDTS  635
            ++Y++Y+ +P PENMP+L DL + L  Q+   + ++A  +++YV GSLNVFNHRT+VD +
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  636  NRVVCYDIKELGKQLKKIGMLVVQDQVWNRVTINRASKKATRYYVDEFHLLLKEPQTANY  695
            NR+V +DIKELGKQLKK+GML+VQDQ+W RVT NR+  KAT+Y+ DEFHLLLKE QTA Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  696  SIEIWKRFRKWGGMPTGLTQNIKDLLASPEIENIFDNTDFILMLNQAGTDRDILAKKLNI  755
            S EIWKRFRKWGG+PTG TQN+KDLL+SPEIENI++N+DFI +LNQA+ DR ILA +LN+
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  756  SKHQLSYVTNSGEGEGLLFYGNTIVPFVDQFPKNTRLYSLITTKPEEV  803
            S +Q  Y+ NS  GEGLL++ N ++PF + +P NT+LY ++TT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

20) CD630_18560 in NC_009089


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  683 bits (2582),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 403/768 (53%), Positives = 587/768 (77%), Gaps = 5/768 (0%)

Query  45   FRKEPKRYTVEDTIPYLRLLKSGICQIDENHFNKSIAFEDINYQLALEEDRDLIFNQFAN  104
            ++ + +  T +++IPY  +   G+C++    F+K I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  105  FLNSFDPSISIEFSYINQLGRNEEMKSAIQIPDKGDGFDDIRLEFREMLKSQIVKGNNGL  164
            + N  D+SI I+FS++N+     +   +++I+ +GD+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  165  KKSKYVTFTVEADNLEQATSKLERMEIDILSSFKSMGVRAESLNGEERLKILHDVLNPN-  223
             K+KY+TFT+EA+++  A ++L R+ +D+L+ FKSMG  A+ ++G ERL++LH+V +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  224  KTFEFSYKDLKKKE-STKTYIAPDEFNFTPSRYFKFGKFIGAASHFQILASELSDRMLAE  282
              F+F  K L     STK +IAP  + F  ++ F  G   GA S +QIL++ELSD MLA+
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  283  FLDIDDNINISFHIKAIEQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLIT  342
            FL+ +  + +++H++AIEQ+ AIK +KRK TD+D MKI E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  343  YGEDVKSLLKDLQTRDERMFVVTIIFMNFARTIQKLDNTISQISSIANKHNCKLKRLDHS  402
            YGED K LL  LQTR+ER+F +T++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  403  QEQGLISVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSANSLYYGLNALSHNLIMA  462
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  463  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILTTDDDVIICDPEGEYGNLVRQFKGEVI  522
            DRK+ + PN+L LGTPGSGKS S K E+ + +LTT DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  523  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  581
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  582  KIYGKYFENPILENMPILQDLYDMLKNQEEKVGKKLATEMEIYVTGSLNVFNNRSNVDLN  641
             IY  Y+ +P  ENMPIL DL   L +Q+   + ++A  +++YV+GSLNVFN+R+NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  642  KQLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASY  700
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  701  SVEIWKRFRKWGGIPTGITQNVKDLLMSNEIENIFDNTDFVLMLNQASGDREILARKLKI  760
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  761  SQPQLKYVTNSNAGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEV  808
            S  Q KY+ NS++GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

21) HMPREF0389_00661 in NC_016630


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  681 bits (2576),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 398/768 (52%), Positives = 588/768 (77%), Gaps = 5/768 (0%)

Query  33   FKKEPKRHTVEDTLPYLRMLKSGICQSDEKHFSKSIAFEDINYQLALEEDRDLIFNQFAN  92
            +K + + HT ++++PY  M   G+C+     FSK I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  93   FLNSFDPSVKIELSYINQLGRNEEMQSAIQIPDKKDGFDEIRLEFREMLKNQIVKGNNGL  152
            + N  D+S+ I++S++N+     +   +++I+ + D+FD+IR E+  +L++Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  153  RKSKYITFTVEADNMEQAISKLERLEIDILSSLKSMGVRAESLNGEERLKILHDVLNP-G  211
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ ++G ERL++LH+V +P G
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  212  KTFEFSYKDLKKKE-STKSYITPDEFNFTPSRYFKFGKFIGAISHFQILASELSDRMLAE  270
              F+F  K L     STK +I+P  + F  ++ F  G   GA+S +QIL++ELSD MLA+
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  271  FLDIDDNINISFHIKAIEQSEAIKMVKRKNTDIDKMRIEENKKAVRAGYDMDILPSDLIT  330
            FL+ +  + +++H++AIEQ+ AIK +KRK TD+D M+I E+KKAVR+GYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  331  YGEDVKSLLKDLQTRDERMFVVTIIFMNFARTVQKLENAIAQISSIANKHNCKLKRLDHA  390
            YGED K LL  LQTR+ER+F +T++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  391  QEQGLVSVLPLGVNKLEINRGLTSSSTAVFIPFTTEELFINSSNSLYYGLNALSHNLIMA  450
            QEQGL S LPLGVN++ I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  451  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFNGEVI  510
            DRK+ + PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LV++++G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  511  KVSSKSKDYLNPLDINMNYGDGDTPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  569
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  570  KIYEKYFNEPEPKNMPILQDLYDMLKNQEEKVGKKLATEMEIYVTGSLNVFNHQSNVDLN  629
             IY  Y+ +P P NMPIL DL   L +Q+   + ++A  +++YV+GSLNVFNH++NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  630  KQLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKEEQTASY  688
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLKEEQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  689  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  748
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  749  SKPQLKYVTNSNAGEGLLFFGNTIVPFIDKFPKDTILYQKMTTKPEEV  796
            S  Q KY+ NS++GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

22) CDR20291_1790 in NC_013316


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  677 bits (2558),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/768 (52%), Positives = 584/768 (77%), Gaps = 5/768 (0%)

Query  33   FKKEPKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAFQDINYQLALDEDRDLIFNQFAN  92
            +K + +  T +++IPY  +   G+C++    FSK I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  93   FLNSFDPSISIEFSYINQLGRNEEMKSAIQIPDKKDGFDDIRFEFREMLKSQIVKGNNGL  152
            + N  D+SI I+FS++N+     +   +++I+ + D+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  153  KKSKYVTFTVEADNLEQATSKLERLEIDILSSLKSMGVRAESLNGEERLKILHDVLNPN-  211
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ ++G ERL++LH+V +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  212  KTFKFSYKDLKKRE-STKTYIVPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSE  270
              F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD ML++
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  271  FLDIDDNINISFHIRAIDQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLIT  330
            FL+ +  + +++H++AI+Q+ AIK +KRK TD+D MKI E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  331  YGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDHS  390
            YGED K LL  LQTR+ER+F ++++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  391  QEQGLVSVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMA  450
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  451  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVI  510
            DRK+ + PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  511  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  569
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  570  KIYEKYFEHPTPDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLN  629
             IY  Y+ +P P+NMPIL DL   L +Q+   + ++A  +++YVSGSLNVFNHR+NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  630  KKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASY  688
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  689  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  748
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  749  SLPQLRYVTNSNEGEGLLFFGNTIVPFIDKFPKDTILYQKMTTKPEEV  796
            S  Q +Y+ NS+ GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

23) SZO_12860 in NC_012470


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  677 bits (2559),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/797 (51%), Positives = 597/797 (75%), Gaps = 6/797 (0%)

Query  15   NKKALRSQKRDLKQNKGKIKKDSNILDLIFKKEPKRYTVEDTIPYLRLLKSGICQLDEKH  74
            +KK +  +    K  +++ +K+ + +   +K + +  T +++IPY  +   G+C++    
Sbjct  2    SKKEIPRETEKTKLTRAQ-RKEIDAVIRKYKGDGRPHTAQQSIPYEVMYPDGVCRVSPGV  60

Query  75   FSKSIAFQDINYQLALDEDRDLIFNQFANFLNSFDPSIAIEFSYINQLGRNEEMKSAIQI  134
            FSK I F DI+YQLA  + +  IF+++ ++ N  D+SI I+FS++N+     +   +++I
Sbjct  61   FSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEI  120

Query  135  PNKGDGFDDIRLEFREMLKSQIVKGNNGLKKSKYVTFTVEADNFEQATSKLERLEIDILS  194
            + +GD+FDDIR E+  +L+ Q+ +GNNG+ K+KY+TFT+EA++   A ++L R+ +D+L+
Sbjct  121  APQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLG  180

Query  195  NLKGMGVRAESLTGEERLKILHDILNPN-KTFEFSYKDLKKKE-STKTYIVPDEFNFMPS  252
             +K+MG  A+ + G ERL++LH++ +P+   F+F  K L     STK +I P  + F  +
Sbjct  181  YFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGNA  240

Query  253  RYFKFGKFIGATSHFQILASELSDRMLSEFLDIDDNINISFHIKAIDQSEAIKMVKRKNT  312
            + F  G   GA S +QIL++ELSD ML++FL+ +  + +++H++AI+Q+ AIK +KRK T
Sbjct  241  KTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKIT  300

Query  313  DIDKMRIEENKKAVRSGYDMDILPSDLITYGEDVKSLLKDLQTRDERMFVVSIVFMNFAR  372
            D+D M+I E+KKAVRSGYDMDILPSDL TYGED K LL  LQTR+ER+F ++++ +N A 
Sbjct  301  DLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVAD  360

Query  373  TVQKLDNTIAQISSIANKHNCKLKRLDHTQEQGLVSVLPLGVNKIEIDRGLTSSSTAVFM  432
            T QKL+N + Q +++A+KHNC L RLD  QEQGL S LPLGVN+I I+R+LT+SS AVF+
Sbjct  361  TKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFV  420

Query  433  PFTTEELFINSSNSLYYGLNALSHNLIMADRKKLKNPNGLILGTPGSGKSFSAKREMANA  492
            PF T+ELF +++ ++YYG+NA S+N+IM DRK+ + PN+L LGTPGSGKS S K E+ + 
Sbjct  421  PFVTQELF-QGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSV  479

Query  493  ILVTDDDVIICDPEGEYGNLVRQFKGEVIKVSSKSKDYLNPLDINMNYGDGDAPLKDKAN  552
            +L T DD++I DPE+EY  LV+++ G+VI++S+ SKD++NPLDIN+NY+++D PL  K++
Sbjct  480  FLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLNYSEDDNPLALKSD  539

Query  553  FIMSMLELVVGG-SGLTAEEKSVIDRCLPKIYEKYFENPTPDNMPILQDLYDMLKGQEEK  611
            F++S  ELV+GG +GL A EK+VIDR +  IY  Y+ +P P+NMPIL DL   L +Q+  
Sbjct  540  FVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPILSDLHKALLDQHVP  599

Query  612  VGKKLATEMEIYVSGSLNVFNHRSNVDLNKKLLCFDIKELGSQLKKIGMLVIQDQVWNKV  671
             + ++A  +++YVSGSLNVFNHR+NVD+ ++L+ FDIKELG QLKK+GML++QDQ+W +V
Sbjct  600  EADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRV  659

Query  672  SQNRGN-KATRYYIDEFHLLLKDEQTASYSVEIWKRFRKWGGIPTGITQNVKDLLMSKEI  730
            + NR++ KAT+Y+ DEFHLLLK+EQTA+YS EIWKRFRKWGGIPTG TQNVKDLL S EI
Sbjct  660  TANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEI  719

Query  731  ENIFDNTDFVLMLNQASGDREILARKLKISLPQLRYVTNSNEGEGLLFFGNTIVPFLDKF  790
            ENI++N+DF+ +LNQASGDR ILA +L++S  Q +Y+ NS+ GEGLL+F N ++PF + +
Sbjct  720  ENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPI  779

Query  791  PKDTILYQKMTTKPEEV  807
            P +T LY+ MTT+ +EV
Sbjct  780  PHNTQLYKIMTTRLNEV  796

24) SANR_1350 in NC_022239


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  676 bits (2555),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 397/768 (52%), Positives = 586/768 (77%), Gaps = 5/768 (0%)

Query  45   FRKEPKRYTVEDTIPYLRLLKSGICQIDEKHFNKSIAFEDINYQLALEEDRDLIFNQFAN  104
            ++ + +  T +++IPY  +   G+C++    F+K I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  105  FLNSFDPSVSIEFSYINQLGRNEEMKSAIQIPDKKDGFDDIRLEFREMLKSQIVKGNNGL  164
            + N  D+S+ I+FS++N+     +   +++I+ + D+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  165  KKSKYVTFTVEADNLEQATSKLERLEIDILSSLKSMGVRAESLNGEERLKILHDVLNPN-  223
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ ++G ERL++LH+V +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  224  KTFEFSYKDLKKKE-STKTYIVPDEFNFTPSRYFKFGKFIGAASHFQILASELSDRMLAE  282
              F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD MLA+
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  283  FLDIDDNINISFHIKAIEQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLIT  342
            FL+ +  + +++H++AIEQ+ AIK +KRK TD+D MKI E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  343  YGEDVKSLLKDLQTRDERMFVVTIIFMNFARTIQKLDNTISQISSIANKHNCKLKRLDHS  402
            YGED K LL  LQTR+ER+F +T++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  403  QEQGLISVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSANSLYYGLNALSHNLIMA  462
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  463  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILTTDDDVIICDPEGEYGNLVRQFKGEVI  522
            DRK+ + PN+L LGTPGSGKS S K E+ + +LTT DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  523  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  581
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  582  KIYEKYFENPKPCNMPILQNLYDMLKNQEEKVGKKLATEMEIYVTGSLNVFNHQSNVDLN  641
             IY  Y+ +P+P NMPIL +L   L +Q+   + ++A  +++YV+GSLNVFNH++NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  642  KQLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASY  700
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  701  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  760
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  761  SQPQLRYVTNSNAGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEV  808
            S  Q +Y+ NS++GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

25) SDE12394_07195 in NC_017567


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  676 bits (2556),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 397/768 (52%), Positives = 584/768 (77%), Gaps = 5/768 (0%)

Query  45   FRKEQKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAFQDINYQLALDEDRDLIFNQFAN  104
            ++ + +  T +++IPY  +   G+C++    FSK I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  105  FLNSFDPSIAIEFSYINQLGRNEEMKSAIQIPDKGDGFDDIRLEFREMLKSQIVKGNNGL  164
            + N  D+SI I+FS++N+     +   +++I+ +GD+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  165  KKSKYVTFTVEADNLEQATSKLERLEIDILSNLKSMGVRAESLTGEERLKILHDILNPN-  223
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ + G ERL++LH++ +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  224  KTFEFSYKDLKKKE-STKTYIVPDEFNFMPSRYFKFGKFIGATSHFQILASELSDRMLSE  282
              F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD ML++
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  283  FLDIDDNINISFHIKAIDQSEAIKMVKRKNTDIDKMRIEENKKAVRSGYDMDILPSDLIT  342
            FL+ +  + +++H++AI+Q+ AIK +KRK TD+D M+I E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  343  YGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTITQISSIANKHNCKLKRLDHT  402
            YGED K LL  LQTR+ER+F ++++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  403  QEQGLVSVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMA  462
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  463  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVI  522
            DRK+ + PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  523  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  581
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  582  KIYEKYFENPTPDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLN  641
             IY  Y+ +P P+NMPIL DL   L +Q+   + ++A  +++YVSGSLNVFNHR+NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  642  KKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRG-SKATRYYIDEFHLLLKDEQTASY  700
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR+ +KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  701  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  760
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  761  SLPQLRYVTNSNEGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEV  808
            S  Q +Y+ NS+ GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

26) SAIL_7550 in NC_021507


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  675 bits (2552),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/750 (54%), Positives = 577/750 (77%), Gaps = 5/750 (0%)

Query  1    MLPEGICQLDEKNYSKTISFQDINYQLALEEDRDLIFNQFANFLNSFDPSVHIELSYVNQ  60
            M P+G+C++    +SK I F DI+YQLA  + +  IF+++ ++ N  D+S+HI++S++N+
Sbjct  48   MYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNR  107

Query  61   LGRNKDLQDAIKIADKGDFYDDVRKEFREMLKLQLAKGNNGLKKMKYITFTTEADNLEQA  120
                 +   ++ IA +GD +DD+R E+  +L+ QLA+GNNG+ K KY+TFT EA+++  A
Sbjct  108  KVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAA  167

Query  121  RAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNPDKN-FDFSYKDLKKKE-STK  178
            RA+L+R+  D+L+ FKSMG  A+ +DG ERL L+H++ +PD + F+F  K L     STK
Sbjct  168  RARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTK  227

Query  179  SHITPKIFNFAPANNFKFGKFIGAVSHFQILASELSDRMLSEFLDIDDNIYVAFHIDVVE  238
              I+P  + F+ A+ F  G   GAVS +QIL++ELSD ML++FL+ +  + V +H++ +E
Sbjct  228  DFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIE  287

Query  239  QAEAIKLIKRKNTDLDRMKIEEQKKAVRAGYDMDIIPSDINTFGADVKSMLSDLQNRDER  298
            Q+ AIK IKRK TDLD MKI EQKKAVR+GYDMDI+PSD+ T+G D K +L+ LQ R+ER
Sbjct  288  QTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNER  347

Query  299  LFVVTIAMMNFARTNQKLENTIAQISSIANRHNCQVKRLSHQQEQGLVSVLPLGVNQVEI  358
            LF +T+ ++N A T+QKL+N + Q +++A++HNC + RL  QQEQGL S LPLGVNQ+ I
Sbjct  348  LFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKI  407

Query  359  KRFLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMADRKKLKNPNGLILGTPGS  418
            +R LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM DRK+ + PN+L LGTPGS
Sbjct  408  QRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGS  466

Query  419  GKSFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSKDYLNPLDINMN  478
            GKS S K E+ + +L T DD++I DPE+EY  LVK+++G+VI++S+ SKD++NPLDIN+N
Sbjct  467  GKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLN  526

Query  479  YGDGDAPLKDKANFIMSMLELVVGG-SGLTAAEKSVIDRCLPKIYQKYFEDPKPENMPIL  537
            Y+++D PL  K++F++S  ELV+GG +GL A EK+VIDR +  IY+ Y+ DP+PENMPIL
Sbjct  527  YSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPIL  586

Query  538  GDLYDMLLSQEEGVGRKLATEMEIYVKGSLNVFNNRSNVDLNRQLLCFDIKELGTQLKKI  597
            +DL   LL Q+   + ++A  +++YV GSLNVFN+R+NVD+  +L+ FDIKELG QLKK+
Sbjct  587  SDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKL  646

Query  598  GMLVIQDQVWNKVSLNRG-SKSTRYYIDEFHLLLKDPQTASYSVEIWKRFRKWGGIPTGI  656
            GML++QDQ+W +V+ NR+ +K+T+Y+ DEFHLLLK+ QTA+YS EIWKRFRKWGGIPTG 
Sbjct  647  GMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGA  706

Query  657  TQNVKDLLTSQEIENIFDNTDFVLMLNQASGDRDILAKKLKISPYQLNYITNSNAGEGLL  716
            TQNVKDLL+S EIENI++N+DF+ +LNQASGDR ILA +L++S  Q +YI NS++GEGLL
Sbjct  707  TQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLL  766

Query  717  FFGNTIVPFIDKFPKDTMLYKLMTTKPEET  746
            +F N ++PF + +P +T LYK+MTT+ +E 
Sbjct  767  IFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

27) SIR_0990 in NC_022246


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  675 bits (2553),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/767 (53%), Positives = 583/767 (77%), Gaps = 5/767 (0%)

Query  34   KKEPKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAFQDINYQLALDEDRDLIFNQFANF  93
            K + +  T +++IPY  +   G+C++    FSK I F DI+YQLA  + +  IF+++ ++
Sbjct  31   KGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDL  90

Query  94   LNSFDPSISIEFSYINQLGRNEEMKSAIQIPDKKDGFDDIRFEFREMLKSQIVKGNNGLK  153
             N  D+SI I+FS++N+     +   +++I+ + D+FDDIR E+  +L+ Q+ +GNNG+ 
Sbjct  91   YNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMV  150

Query  154  KSKYVTFTVEADNLEQATSKLERLEIDILSNLKSMGVRAESLNGEERLKILHDVLNPN-K  212
            K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ ++G ERL++LH+V +P+  
Sbjct  151  KTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGE  210

Query  213  TFEFSYKDLKKRE-STKTYIVPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSEF  271
             F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD ML++F
Sbjct  211  IFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADF  270

Query  272  LDIDDNINISFHIRAIDQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLITY  331
            L+ +  + +++H++AI+Q+ AIK +KRK TD+D MKI E+KKAVRSGYDMDILPSDL TY
Sbjct  271  LNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATY  330

Query  332  GEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDHSQ  391
            GED K LL  LQTR+ER+F ++++ +N A T QKL+N + Q +++A+KHNC L RLD  Q
Sbjct  331  GEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQ  390

Query  392  EQGLVSVLPLGVNKIDIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMAD  451
            EQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM D
Sbjct  391  EQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIMLD  449

Query  452  RKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVIK  511
            RK+ + PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LV+++ G+VI+
Sbjct  450  RKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIR  509

Query  512  VSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLPK  570
            +S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR +  
Sbjct  510  LSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRV  569

Query  571  IYEKYFEHPTPDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLNK  630
            IY  Y+ +P P+NMPIL DL   L +Q+   + ++A  +++YVSGSLNVFNHR+NVD+ +
Sbjct  570  IYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGN  629

Query  631  KLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASYS  689
            +L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+YS
Sbjct  630  RLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYS  689

Query  690  VEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKIS  749
             EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++S
Sbjct  690  AEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLS  749

Query  750  LPQLRYVTNSNEGEGLLFFGNTIVPFIDKFPKDTILYQKMTTKPEEV  796
              Q +Y+ NS+ GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  750  TEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

28) CD630_04180 in NC_009089


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  675 bits (2553),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/768 (52%), Positives = 584/768 (77%), Gaps = 5/768 (0%)

Query  33   FKKEPKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAFQDINYQLALDEDRDLIFNQFAN  92
            +K + +  T +++IPY  +   G+C++    FSK I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  93   FLNSFDPSISIEFSYVNQLGRNEEMKSAIQIPDKKDGFDDIRFEFREMLKSQIVKGNNGL  152
            + N  D+SI I+FS++N+     +   +++I+ + D+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  153  KKSKYVTFTVEADNLEQATSKLERLEIDILSNLKSMGVRAESLNGEERLKILHDVLNPN-  211
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ ++G ERL++LH+V +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  212  KTFEFSYKDLKKRE-STKTYIVPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSE  270
              F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD ML++
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  271  FLDIDDNINISFHIRAIDQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLIT  330
            FL+ +  + +++H++AI+Q+ AIK +KRK TD+D MKI E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  331  YGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDHS  390
            YGED K LL  LQTR+ER+F ++++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  391  QEQGLVSMLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMA  450
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  451  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVI  510
            DRK+ + PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  511  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  569
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  570  KIYEKYFEHPTPDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLN  629
             IY  Y+ +P P+NMPIL DL   L +Q+   + ++A  +++YVSGSLNVFNHR+NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  630  KKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASY  688
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  689  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  748
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  749  SLPQLRYVTNSNEGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEV  796
            S  Q +Y+ NS+ GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

29) GGS_1239 in NC_018712


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  675 bits (2554),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/768 (52%), Positives = 586/768 (77%), Gaps = 5/768 (0%)

Query  45   FRKEPKRYTVEDTIPYLRLLKSGICQIDEKHFNKSIAFEDINYQLALEEDRDLIFNQFAN  104
            ++ + +  T +++IPY  +   G+C++    F+K I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  105  FLNSFDPSVSIEFSYINQLGRNEEMKSAIQIPDKKDGFDDIRLEFREMLKSQIVKGNNGL  164
            + N  D+S+ I+FS++N+     +   +++I+ + D+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  165  KKSKYVTFTVEADNLEQATSKLERLEIDILSSLKSMGVRAESLNGEERLKILHDVLNPN-  223
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ ++G ERL++LH+V +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  224  KTFEFSYKDLMKKE-STKTYIAPDEFNFTPSRYFKFGKFIGAASHFQILASELSDRMLAE  282
              F+F  K L     STK +IAP  + F  ++ F  G   GA S +QIL++ELSD MLA+
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  283  FLDIDDNINISFHIKAIEQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLIT  342
            FL+ +  + +++H++AIEQ+ AIK +KRK TD+D MKI E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  343  YGEDVKSLLKDLQTRDERMFVVTIIFMNFAKTIQKLDNTISQISSIANKHNCKLKRLDHS  402
            YGED K LL  LQTR+ER+F +T++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  403  QEQGLISVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSANSLYYGLNALSHNLIMA  462
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  463  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILTTDDDVIICDPEGEYGNLVRQFKGEVI  522
            DRK+ + PN+L LGTPGSGKS S K E+ + +LTT DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  523  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  581
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  582  KIYEKYFENPEPCNMPILQDLYDMLKGQEEKVGKKLATEMEIYVTGSLNVFNHQSNVDLN  641
             IY  Y+ +P P NMPIL DL   L +Q+   + ++A  +++YV+GSLNVFNH++NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  642  KQLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASY  700
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  701  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  760
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  761  SQPQLRYVTNSNAGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEV  808
            S  Q +Y+ NS++GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

30) SII_1013 in NC_022237


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  674 bits (2549),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 398/768 (52%), Positives = 584/768 (77%), Gaps = 5/768 (0%)

Query  33   FKKEPKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAFQDINYQLALDEDRDLIFNQFAN  92
            +K + +  T +++IPY  +   G+C++    FSK I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  93   FLNSFDPSISIEFSYINQLGRNEEMKSAIQIPDKKDGFDDIRFEFREMLKSQIVKGNNGL  152
            + N  D+SI I+FS++N+     +   +++I+ + D+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  153  KKSKYVTFTVEADNLEQATSKLERLEIDILSNLKSMGVRAESLNGEERLKILHDVLNPN-  211
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ ++G ERL++LH+V +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  212  KTFEFSYKDLKKRE-STKTYIVPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSE  270
              F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD ML++
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  271  FLDIDDNINISFHIRAIDQSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLIT  330
            FL+ +  + +++H++AI+Q+ AIK +KRK TD+D MKI E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  331  YGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDHS  390
            YGED K LL  LQTR+ER+F ++++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  391  QEQGLVSVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMA  450
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  451  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVI  510
            DRK+ + PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  511  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  569
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  570  KIYEKYFENPISDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLN  629
             IY  Y+ +P ++NMPIL DL   L +Q+   + ++A  +++YVSGSLNVFNHR+NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  630  KKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASY  688
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  689  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  748
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  749  SLPQLRYVTNSNEGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEV  796
            S  Q +Y+ NS+ GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

31) SDSE_1348 in NC_019042


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  673 bits (2545),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 396/768 (52%), Positives = 583/768 (76%), Gaps = 5/768 (0%)

Query  45   FRKEQKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAFQDINYQLALDEDRDLIFNQFAN  104
            ++ + +  T +++IPY  +   G+C++    FSK I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  105  FLNSFDPSIAIEFSYINQLGRNEEMKSAIQIPDKGDGFDDIRLEFREMLKSQIVKGNNGL  164
            + N  D+SI I+FS++N+     +   +++I+ +GD+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  165  KKSKYVTFTVEADNLEQATSKLERLEIDILSNLKSMGVRAESLTGEERLKILHDILNPN-  223
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ + G ERL++LH++ +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  224  KTFEFSYKDLKKKE-STKTYIVPDEFNFMPSRYFKFGKFIGATSHFQILASELSDRMLSE  282
              F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD ML++
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  283  FLDIDDNINISFHIKAIDQSEAIKMVKRKNTDIDKMRIEENKKAVRSGYDMDILPSDLIT  342
            FL+ +  + +++H++AI+Q+ AIK +KRK TD+D M+I E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  343  YGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTITQISSIANKHNCKLKRLDHT  402
            YGED K LL  LQTR+ER+F ++++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  403  QEQGLVSVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMA  462
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  463  DRKKLKNPNGLILGTPGSGKYFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVI  522
            DRK+ + PN+L LGTPGSGK  S K E+ + +L T DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  523  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  581
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  582  KIYEKYFENPTPDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLN  641
             IY  Y+ +P P+NMPIL DL   L +Q+   + ++A  +++YVSGSLNVFNHR+NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  642  KKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRG-SKATRYYIDEFHLLLKDEQTASY  700
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR+ +KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  701  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  760
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  761  SLPQLRYVTNSNEGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEV  808
            S  Q +Y+ NS+ GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

32) Ethha_1760 in NC_014828


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  673 bits (2545),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 384/766 (51%), Positives = 593/766 (78%), Gaps = 5/766 (0%)

Query  27   PQTAQQTIPYIEMLRDGICKVREGFYTKTVEYEDINYSVASADDQAAIFDGYCSFLNYFD  86
            P+TAQQ+IPY  M  DG+C+V  G ++K +E+ DI+Y +A +D Q+AIF+  C + NY D
Sbjct  36   PHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVD  95

Query  87   SALPFQLSFINHRSRPENRY--SVNIPPQHDKYDAIRGEYVEMLTGQIAKSNNGIVRSKY  144
            +++ +Q+SF+N++  P  +Y  S +I+PQ D +D IR+EY  +L  Q+A++NNG+V++KY
Sbjct  96   ASIHIQFSFLNRKVDP-VQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKY  154

Query  145  ITFGIEADGIGAARPRLERVEADIMSDFKKLGVQSRPLAGRERLEVLHGQLHPNSREPFA  204
            +TF IEA+++ AAR+RL R+  D+++ FK +G  ++ + G+ERL++LHG  HP++ E F 
Sbjct  155  LTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG-EIFN  213

Query  205  FSWADIPKTGMGTKDFIAPTSFDFRQSRAFRVGGTTWGAVSYMQILASELSDKllaelle  264
            F W  ++ +G++TKDFIAP+S+ F ++++F +GG   GAVS++QIL++ELSD +LA++L+
Sbjct  214  FDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKY-GAVSFLQILSPELSDDMLADFLN  272

Query  265  mdaemTITLHIQTVDQTKAIKALKGKISDIDKMKVEEQKKAVRAGYDMDILPPDLVTFSK  324
             ++ + + LH+Q+++QTKAIK++K KI+D+D MK+ EQKKAVR+GYDMDILP+DL T++ 
Sbjct  273  TESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGE  332

Query  325  DAMALLSDLQSRNERMFLLTFLILNTAPARQQLENDIFTVAGIVQKYNCALKRLDFQQEA  384
            DA  LL+ LQ+RNER+F LTFL+LN A ++Q+L+ND+F  AG+ QK NC+L RLD+QQE 
Sbjct  333  DAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQ  392

Query  385  GYMSSLILGGNSIEIQRGMTTSSTAIFVPFMTRELRMGGPAIYYGQNALSHNVIMADRKK  444
            G  SSL LG N I IQR++TTSS A+FVPF+T+EL  GG+A+YYG NA S+N+IM DRK+
Sbjct  393  GLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQ  452

Query  445  LKSANGLYLGSTGSGKSFAAKRELINVFLATRDRIIVVDPMGEYAPLVRRLGGQVIDIAP  504
             + +N+L LG+ GSGKS + K E+++VFL+T D I++ DP +EY PLV+RL GQVI ++P
Sbjct  453  ARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSP  512

Query  505  DSSHHINPMDIQMSMADEESPLSMKADFLLSLCELIVGGRDGLQPIEKTVIDRCVSLVYR  564
             S + +NP+DI+++ +++++PL++K+DF+LS+CEL++GG++GL++IEKTVIDR V ++YR
Sbjct  513  TSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYR  572

Query  565  NIALGIDTQKMPVLQDLYELLCQQPEPEAKRIATALELYCTGSLNLFNHTTNITLNSRIV  624
                +   ++MP+L DL   L +Q  PEA R+A AL+LY +GSLN+FNH TN+ + +R+V
Sbjct  573  PYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLV  632

Query  625  CVVLKGLGENLRKIAMHITNELVTSAVNANFQHGMATWCYFDEFHILLRDALTASYFVTV  684
               +K LG +L+K++M I ++ + + V AN  +G ATW + DEFH+LL++  TA+Y   +
Sbjct  633  SFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEI  692

Query  685  WKMLRKKGCVPSALTQNVKDLMASREIENILENTDFMILLSQAQGDRQILAKQLNISPHQ  744
            WK +RK G +P++ TQNVKDL++S EIENILEN+DF+ LL+QA GDR+ILA +LN+S +Q
Sbjct  693  WKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQ  752

Query  745  LSYITHSNPGDGLLFYGNTTIPFVDRFPKDTEIYRLLTTRPEDLAN  790
              YI +S+PG+GLL++ N  +PF + +P +T++Y+++TTR +++A 
Sbjct  753  QKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEVAG  798

33) SPAP_0880 in NC_014494


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  672 bits (2539),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 403/760 (54%), Positives = 586/760 (78%), Gaps = 5/760 (0%)

Query  51   TVEDTIPYIRMLPEGICQLDEKNYSKTISFQDINYQLALEEDRDLIFNQFANFLNSFDPS  110
            T +++IPY  M P+G+C++    +SK I F DI+YQLA  + +  IF+++ ++ N  D+S
Sbjct  38   TAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDAS  97

Query  111  VHIELSYVNQLGRNKDLQDAIKIADKGDFYDDVRKEFREMLKLQLAKGNNGLKKMKYITF  170
            +HI++S++N+     +   ++ IA +GD +DD+R E+  +L+ QLA+GNNG+ K KY+TF
Sbjct  98   IHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTF  157

Query  171  TTEADNLEQARAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNPDKN-FDFSYK  229
            T EA+++  ARA+L+R+  D+L+ FKSMG  A+ +DG ERL L+H++ +PD + F+F  K
Sbjct  158  TIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWK  217

Query  230  DLKKKE-STKSHITpnifnfapannfkfgkfIGAVSHFQILASELSDRMLSEFLDIDDNI  288
             L     STK  I+P+ + F+ A+ F  G   GAVS +QIL++ELSD ML++FL+ +  +
Sbjct  218  WLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGV  277

Query  289  YVAFHIDVVEQAEAIKLIKRKNTDLDRMKIEEQKKAVRAGYDMDIIPSDINTFGADVKSM  348
             V +H++ +EQ+ AIK IKRK TDLD MKI EQKKAVR+GYDMDI+PSD+ T+G D K +
Sbjct  278  LVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKL  337

Query  349  LSDLQNRDERLFVVTIVMMNFARTNQKLENTIAQISSIANRHNCQVKRLSHQQEQGLVSV  408
            L+ LQ R+ERLF +T++++N A T+QKL+N + Q +++A++HNC + RL  QQEQGL S 
Sbjct  338  LTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASS  397

Query  409  LPLGVNQVEIKRFLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMADRKKLKNP  468
            LPLGVNQ+ I+R LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM DRK+ + P
Sbjct  398  LPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIMLDRKQARCP  456

Query  469  NGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSKD  528
            N+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LVK+++G+VI++S+ SKD
Sbjct  457  NALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKD  516

Query  529  YLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAAEKSVIDRCLPKIYQKYFE  587
            ++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR +  IY+ Y+ 
Sbjct  517  FVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLA  576

Query  588  DPKPENMPILGDLYDMLLSQEEGVGRKLATEMEIYVKGSLNVFNNRSNVDLNRQLLCFDI  647
            DP+PENMPIL+DL   LL Q+   + ++A  +++YV GSLNVFN+R+NVD+  +L+ FDI
Sbjct  577  DPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDI  636

Query  648  KELGTQLKKIGMLVIQDQVWNKVSLNRG-SKSTRYYIDEFHLLLKDPQTASYSVEIWKRF  706
            KELG QLKK+GML++QDQ+W +V+ NR+ +K+T+Y+ DEFHLLLK+ QTA+YS EIWKRF
Sbjct  637  KELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRF  696

Query  707  RKWGGIPTGITQNVKDLLTSQEIENIFDNTDFVLMLNQASGDRDILAKKLKISPYQLNYI  766
            RKWGGIPTG TQNVKDLL+S EIENI++N+DF+ +LNQASGDR ILA +L++S  Q +YI
Sbjct  697  RKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYI  756

Query  767  TNSNAGEGLLFFGNTIVPFIDKFPKDTMLYKLMTTKPEEA  806
             NS++GEGLL+F N ++PF + +P +T LYK+MTT+ +E 
Sbjct  757  DNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

34) FMG_0960 in NC_010376


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  670 bits (2535),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/761 (53%), Positives = 586/761 (78%), Gaps = 7/761 (0%)

Query  51   TVEDTIPYIRMLPEGICQLDEKNYSRTISFQDINYQLALEEDRDLIFNQFANFLNSFDPS  110
            T +++IPY  M P+G+C++    +S+ I F DI+YQLA  + +  IF+++ ++ N  D+S
Sbjct  38   TAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDAS  97

Query  111  VHIELSYVNQLGRNKDLQDAIKIADKGDFYDDVRKEFREMLKLQLAKGNNGLKKMKYITF  170
            +HI++S++N+     +   ++ IA +GD +DD+R E+  +L+ QLA+GNNG+ K KY+TF
Sbjct  98   IHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTF  157

Query  171  TTEADNLEQARAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNPDKS-FDFSYK  229
            T EA+++  ARA+L+R+  D+L+ FKSMG  A+ +DG ERL L+H++ +PD   F+F  K
Sbjct  158  TIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWK  217

Query  230  DLKKKE-STKSHVTpnifnfapann-fkfGKYIGAVSHFQILASELSDRMLSEFLDIDDN  287
             L     STK  ++P+ + F+ A+     GKY GAVS +QIL++ELSD ML++FL+ +  
Sbjct  218  WLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKY-GAVSFLQILSPELSDDMLADFLNTESG  276

Query  288  IYVAFHIDVVEQAEAIKLIKRKNTDLDRMKIEEQKKAVRAGYDMDIIPSDINTFGADVKS  347
            + V +H++ +EQ+ AIK IKRK TDLD MKI EQKKAVR+GYDMDI+PSD+ T+G D K 
Sbjct  277  VLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKK  336

Query  348  MLSDLQNRDERLFVVSIVMMNFARTNQKLENTIAQISSIANRHNCQVKRLSHQQEQGLVS  407
            +L+ LQ R+ERLF ++++++N A T+QKL+N + Q +++A++HNC + RL  QQEQGL S
Sbjct  337  LLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLAS  396

Query  408  VLPLGVNQVEIKRFLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMADRKKLKN  467
             LPLGVNQ+ I+R LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM DRK+ + 
Sbjct  397  SLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIMLDRKQARC  455

Query  468  PNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSK  527
            PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LVK+++G+VI++S+ SK
Sbjct  456  PNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSK  515

Query  528  DYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAAEKSVIDRCLPKIYQKYF  586
            D++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR +  IY+ Y+
Sbjct  516  DFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYL  575

Query  587  EDPKPENMPILGDLYDMLLSQEEGVGRKLATEMEIYVKGSLNVFNNRSNVDLNRQLLCFD  646
             DP+PENMPIL+DL   LL Q+   + ++A  +++YV GSLNVFN+R+NVD+  +L+ FD
Sbjct  576  ADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFD  635

Query  647  IKELGTQLKKIGMLVIQDQVWNKVSLNRG-SKSTRYYIDEFHLLLKDPQTASYSVEIWKR  705
            IKELG QLKK+GML++QDQ+W +V+ NR+ +K+T+Y+ DEFHLLLK+ QTA+YS EIWKR
Sbjct  636  IKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKR  695

Query  706  FRKWGGIPTGITQNVKDLLTSQEIENIFDNTDFVLMLNQASGDRDILAKKLKISPYQLNY  765
            FRKWGGIPTG TQNVKDLL+S EIENI++N+DF+ +LNQASGDR ILA +L++S  Q +Y
Sbjct  696  FRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKY  755

Query  766  ITNSNAGEGLLFFGNTIVPFIDKFPKDTMLYKLMTTKPEEA  806
            I NS++GEGLL+F N ++PF + +P +T LYK+MTT+ +E 
Sbjct  756  IDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

35) SANR_1858 in NC_022239


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  670 bits (2533),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/768 (52%), Positives = 583/768 (76%), Gaps = 5/768 (0%)

Query  33   FKKEPKRYTVEDTIPYLRLLKSGICQLDEKYFSKSIAFQDINYQLALDEDRDLIFNQFAN  92
            +K + +  T +++IPY  +   G+C++    FSK I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  93   FLNSFDPSISIEFSYINQLGRNEEMKSAIQIPDKKDGFDDIRFEFREMLKSQIVKGNNGL  152
            + N  D+SI I+FS++N+     +   +++I+ + D+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  153  KKSKYVTFTVEADNLEQATSKLERLEIDILSNLKSMGVRAESLNGEERLKILHDVLNPN-  211
             K+KY+TFT+EA+++  A ++L R+ +D+L+ +KSMG  A+ ++G ERL++LH+V +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  212  KTFEFSYKDLKKRE-STKTYIVPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSE  270
              F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD ML++
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  271  FLNIDDNINISFHIRAIDQSEAIKMVKRKNTDIDKMRIEENKKAVRSGYDMDILPSDLIT  330
            FLN +  + +++H++AI+Q+ AIK +KRK TD+D M+I E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  331  YGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDHS  390
            YGED K LL  LQTR+ER+F ++++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  391  QEQGLVSMLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMA  450
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  451  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFKGEVI  510
            DRK+ + PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LV+++ G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  511  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  569
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  570  KIYEKYFENPEPCNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLN  629
             IY  Y+ +P P NMPIL DL   L +Q+   + ++A  +++YVSGSLNVFNHR+NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  630  KKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASY  688
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  689  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  748
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  749  SLLQLRYVTNSNEGEGLLFFGNTIVPFIDNFPKDTILYQKMTTKPEEV  796
            S  Q +Y+ NS+ GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

36) SEQ_0742 in NC_012471


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  670 bits (2533),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/768 (52%), Positives = 584/768 (77%), Gaps = 5/768 (0%)

Query  45   FRKEQKRYTVEDTIPYLRLLKSGICQLDEKHFSKSIAFQDINYQLALDEDRDLIFNQFAN  104
            ++ + +  T +++IPY  +   G+C++    FSK I F DI+YQLA  + +  IF+++ +
Sbjct  30   YKGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  105  FLNSFDPSIAIEFSYINQLGRNEEMKSAIQIPDKGDGFDDIRLEFREMLKSQIVKGNNGL  164
            + N  D+SI I+FS++N+     +   +++I+ +GD+FDDIR E+  +L+ Q+ +GNNG+
Sbjct  90   LYNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGM  149

Query  165  KKSKYVTFTVEADNLEQATSKLERLDIDILSNLKSMGVRAESLTVEERLKILHDILNPN-  223
             K+KY+TFT+EA+++  A ++L R+++D+L+ +KSMG  A+ +   ERL++LH++ +P+ 
Sbjct  150  VKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG  209

Query  224  KTFEFSYKDLKKKE-STKTYIVPDEFNFMPSRYFKFGKFIGATSHFQILASELSDRMLSE  282
              F+F  K L     STK +I P  + F  ++ F  G   GA S +QIL++ELSD ML++
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  283  FLDIDDNINISFHIKAIDQSEAIKMVKRKNTDIDKMRIEENKKAVRSGYDMDILPSDLIT  342
            FL+ +  + +++H++AI+Q+ AIK +KRK TD+D M+I E+KKAVRSGYDMDILPSDL T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  343  YGEDVKSLLKDLQTRDERMFVVSIVFMNFARTVQKLDNTIAQISSIANKHNCKLKRLDHT  402
            YGED K LL  LQTR+ER+F ++++ +N A T QKL+N + Q +++A+KHNC L RLD  
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  403  QEQGLVSVLPLGVNKIEIDRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMA  462
            QEQGL S LPLGVN+I I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM 
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIML  448

Query  463  DRKKLKNPNGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFNGEVI  522
            DRK+ + PN+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LV++++G+VI
Sbjct  449  DRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVI  508

Query  523  KVSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLP  581
            ++S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR + 
Sbjct  509  RLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVR  568

Query  582  KIYERYFENPTYDNMPILQDLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLN  641
             IY  Y+ +P  +NMPIL DL   L +Q+   + ++A  +++YVSGSLNVFNHR+NVD+ 
Sbjct  569  VIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIG  628

Query  642  KKLLCFDIKELGSQLKKIGMLVIQDQVWNKVSQNRGN-KATRYYIDEFHLLLKDEQTASY  700
            ++L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+Y
Sbjct  629  NRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAY  688

Query  701  SVEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKI  760
            S EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++
Sbjct  689  SAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNL  748

Query  761  SLPQLRYVTNSNEGEGLLFFGNTIVPFLDKFPKDTILYQKMTTKPEEV  808
            S  Q +Y+ NS+ GEGLL+F N ++PF + +P +T LY+ MTT+ +EV
Sbjct  749  STEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

37) Apre_1815 in NC_013164


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  662 bits (2504),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/750 (54%), Positives = 579/750 (78%), Gaps = 5/750 (0%)

Query  1    MLPEGICQLDEKNYSKTISFQDINYQLALEEDRDLIFNQFANFLNSFDPSVHIELSYVNQ  60
            M P+G+C++    +SK I F DI+YQLA  + +  IF+++ ++ N  D+S+HI++S++N+
Sbjct  48   MYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNR  107

Query  61   LGRNRDLQDAIKIADKGDFYDDVRKEFREMLKLQLAKGNNGLKKMKYITFTTEADNLEQA  120
                 +   ++ IA +GD +DD+R E+  +L+ QLA+GNNG+ K KY+TFT EA+++  A
Sbjct  108  KVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAA  167

Query  121  RAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNPDKN-FDFSYKDLKKKE-STK  178
            RA+L+R+  D+L+ FKSMG  A+ +DG ERL L+H++ +PD + F+F  K L     STK
Sbjct  168  RARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWKWLAPSGLSTK  227

Query  179  SHITpnifnfapannfkfgkfIGAVSHFQILASELSDRMLSEFLDIDDNIYVAFHIDVVE  238
              I+P+ + F+ A+ F  G   GAVS +QIL++ELSD ML++FL+ +  + V +H++ +E
Sbjct  228  DFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIE  287

Query  239  QAEAIKLIKRKNTDLDRMKIEEQKKAVRAGYDMDIIPSDINTFGADVKSMLSDLQNRDER  298
            Q+ AIK IKRK TDLD MKI EQKKAVR+GYDMDI+PSD+ T+G D K +L+ LQ R+ER
Sbjct  288  QTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNER  347

Query  299  LFVVTIVMMNFARTNQKLENTIAQISSIANRHNCQVKRLSHQQEQGLVSVLPLGVNQVEI  358
            LF +T++++N A T+QKL+N + Q +++A++HNC + RL  QQEQGL S LPLGVNQ+ I
Sbjct  348  LFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKI  407

Query  359  KRFLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMADRKKLKNPNGLILGTPGS  418
            +R LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM DRK+ + PN+L LGTPGS
Sbjct  408  QRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGS  466

Query  419  GKSFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSKDYLNPLDINMN  478
            GKS S K E+ + +L T DD++I DPE+EY  LVK+++G+VI++S+ SKD++NPLDIN+N
Sbjct  467  GKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLN  526

Query  479  YGDGDAPLKDKANFIMSMLELVVGG-SGLTAAEKSVIDRCLPKIYQKYFEDPKPENMPIL  537
            Y+++D PL  K++F++S  ELV+GG +GL A EK+VIDR +  IY+ Y+ DP+PENMPIL
Sbjct  527  YSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPIL  586

Query  538  GDLYDMLLSQEEGVGRKLATEMEIYVKGSLNVFNNRSNVDLNRQLLCFDIKELGTQLKKI  597
            +DL   LL Q+   + ++A  +++YV GSLNVFN+R+NVD+  +L+ FDIKELG QLKK+
Sbjct  587  SDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKL  646

Query  598  GMLVIQDQVWNKVSLNRG-SKSTRYYIDEFHLLLKDPQTASYSVEIWKRFRKWGGIPTGI  656
            GML++QDQ+W +V+ NR+ +K+T+Y+ DEFHLLLK+ QTA+YS EIWKRFRKWGGIPTG 
Sbjct  647  GMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGA  706

Query  657  TQNVKDLLTSQEIENIFDNTDFVLMLNQASGDRDILAKKLKISPYQLNYITNSNAGEGLL  716
            TQNVKDLL+S EIENI++N+DF+ +LNQASGDR ILA +L++S  Q +YI NS++GEGLL
Sbjct  707  TQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLL  766

Query  717  FFGNTIVPFIDKFPKDTMLYKLMTTKPEEA  746
            +F N ++PF + +P +T LYK+MTT+ +E 
Sbjct  767  IFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

38) RHOM_10340 in NC_015977


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  656 bits (2479),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 380/762 (50%), Positives = 585/762 (77%), Gaps = 6/762 (0%)

Query  21   SAQQTIPYLSMHPDGVCKLPGGLYTKTVEYEDINYSVASTEDQTAIFSGWSSFLNYFDSS  80
            +AQQ+IPY  M PDGVC+++ G+++K +E+ DI+Y +A  + QTAIF     + NY D+S
Sbjct  38   TAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDAS  97

Query  81   LPFQLSFINRRSHSRSRYQ--VNIPKADDNYNSVRDEFTGMLKNQIAKSNNGIERSKYIT  138
            + +Q+SF+NR+ ++  +Y    +I+  +D+++ +R E+TG+L++Q+A++NNG+ ++KY+T
Sbjct  98   IHIQFSFLNRKVDP-VQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLT  156

Query  139  FGIPAEGIAEARPRLERVEADVMGNFKRLGVPSEPMDGRARLALLHSQMHPGSREAFRFS  198
            F I AE++  AR+RL R+  D++G FK +G  ++ MDG+ RL LLH+  HP++ E F F 
Sbjct  157  FTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG-EIFNFD  215

Query  199  WKDIPQTGLGTKDFIAPDSLDFRQSRTFRIGQYWGAVSYLQIMASELSDKLLAEILELDA  258
            WK ++ +GL+TKDFIAP SL F +++TF +G   GAVS+LQI+++ELSD +LA++L+ ++
Sbjct  216  WKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTES  275

Query  259  EMTVTMHIQTVDQLKAIKTIKGKISDIGKMKVEEQRKAVRSGYDPDILPPDLITFSKDAA  318
             + V +H+Q+++Q KAIKTIK KI+D++ MK+ EQ+KAVRSGYD DILP+DL T++ DA 
Sbjct  276  GVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAK  335

Query  319  ELLADLQSRNERMFLLTFTVVNLAPNRQRLENDVFTVGGIAQKYNCALRRLDWQQEQGFV  378
             LL+ LQ+RNER+F LTF V+N+A  +Q+L+NDVF  +G+AQK NC+L RLD QQEQG+ 
Sbjct  336  KLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLA  395

Query  379  SSLALGYNEVEIQRGMTTSSTAIFIPFMTRELRMAGQALYYGMNALSHNVIMADRKKLKS  438
            SSL+LG N++ IQR++TTSS A+F+PF+T+EL  +G A+YYG+NA S+N+IM DRK+ + 
Sbjct  396  SSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARC  455

Query  439  ANGMYLGSTGSGKSFAAKRELLNVFLTIPQDRIIVVDPMGEYAPLVRRLGGQVIEIAPDS  498
            +N++ LG+ GSGKS + K E+++VFLT P+D I++ DP +EY PLV+RL GQVI ++P S
Sbjct  456  PNALKLGTPGSGKSMSCKSEIVSVFLTTPDD-IFISDPEAEYYPLVKRLHGQVIRLSPTS  514

Query  499  PHHLNPMDVELNMAAGESPLSMKADFLLSLCELVVGGKEGLQPIEKTVIDRCVRLVYREQ  558
             + +NP+D++LN + +++PL++K+DF+LS+CELV+GGK+GL++IEKTVIDR VR++YR  
Sbjct  515  KDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPY  574

Query  559  ALGLETAKTPLLQDLYEELLRQPEPEARRVATALELYCTGSLNLFNHPTNVKTDSRVVCI  618
              +    + P+L DL   LL Q  PEA RVA AL+LY +GSLN+FNH TNV  ++R+V +
Sbjct  575  LADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSF  634

Query  619  VLKNMGENLRKIAMHITNEFVSQAVDQNFHEGAATWCYFDEFHILLRDPLTASYFVAVWK  678
             +K++G +L+K++M I ++ +   V  N  +G ATW + DEFH+LL++  TA+Y   +WK
Sbjct  635  DIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWK  694

Query  679  MLRKKGCVPSALTQNVKDLLASREIENILDNTDFMILLSQAQSDRTILAKQLGISEHQLS  738
             +RK G +P++ TQNVKDLL+S EIENIL+N+DF+ LL+QA +DR ILA +L +S +Q  
Sbjct  695  RFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQK  754

Query  739  YITHSNSGEGLLFYGNVTIPFVDRFPRG-EIYDLLTTRPEDM  779
            YI +S++GEGLL++ NV +PF + +P+  ++Y ++TTR +++
Sbjct  755  YIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

39) SIR_1329 in NC_022246


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  653 bits (2470),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 393/767 (52%), Positives = 584/767 (77%), Gaps = 5/767 (0%)

Query  53   KKESKRYTVEDTIPYLRMLKSGICQTDERHFNKSIVFGDINYQLALDEDRDLIFNQFANF  112
            K +++  T +++IPY  M   G+C+     F+K I F+DI+YQLA  + +  IF+++ ++
Sbjct  31   KGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDL  90

Query  113  LNSFDPSVMIELSYINQLGRNEEMQSAIQIPDKKDGFDDIRLEFREMLKSQIVKGNNGLK  172
             N  D+S+ I++S++N+     +   +++I+ + D+FDDIR E+  +L+ Q+ +GNNG+ 
Sbjct  91   YNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMV  150

Query  173  KSKYVTFTVEADNMEQAISKLERLEIDILSNLKNMGVRAESLTGEERLKILHDILNP-SK  231
            K+KY+TFT+EA+++  A ++L R+ +D+L+ +K+MG  A+ + G ERL++LH++ +P + 
Sbjct  151  KTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGE  210

Query  232  TFYFSYKDLQRKE-STKTYITPDEFNFTPSRYFKFGKFIGATSHFQILASELSDRMLSEF  290
             F F  K L     STK +I+P  + F  ++ F  G   GA S +QIL++ELSD ML++F
Sbjct  211  IFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADF  270

Query  291  LDIDDNINISFHIRAIEQSQAIKMVKRKNTDIDKMRIEENKKAVRSGYDMDILPSDLITY  350
            L+ +  + +++H++AIEQ++AIK +KRK TD+D M+I E+KKAVRSGYDMDILPSDL TY
Sbjct  271  LNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATY  330

Query  351  GEDVKSLLKDLQTRDERMFVVTIVFMNFARTIQKLENSIAQISSIANKHNCKIKRLDHTQ  410
            GED K LL  LQTR+ER+F +T++ +N A T QKL+N + Q +++A+KHNC + RLD  Q
Sbjct  331  GEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQ  390

Query  411  EQGLVSVLPLGVNKLEINRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMAD  470
            EQGL S LPLGVN++ I+R+LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM D
Sbjct  391  EQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIMLD  449

Query  471  RKRLKNPNGLILGTPGSGKSFSAKREMANAiivtdddviicdPEGEYGNLVRQFDGEVIK  530
            RK+ + PN+L LGTPGSGKS S K E+ + ++ T DD++I DPE+EY  LV++++G+VI+
Sbjct  450  RKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIR  509

Query  531  VSSKSKDYLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAEEKSVIDRCLPK  589
            +S+ SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR +  
Sbjct  510  LSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRV  569

Query  590  IYEKYFDNPIKENMPILQDLYDMLKNQEEKVGKKLATEMEIYVTGSLNVFNHQSNVDLNK  649
            IY  Y+ +P  ENMPIL DL   L +Q+   + ++A  +++YV+GSLNVFNH++NVD+ +
Sbjct  570  IYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGN  629

Query  650  KLLCFDIKELGSQLKKIGMLVIQDQVWNKVSLNRGN-KATRYYIDEFHLLLKDEQTASYS  708
            +L+ FDIKELG QLKK+GML++QDQ+W +V+ NR++ KAT+Y+ DEFHLLLK+EQTA+YS
Sbjct  630  RLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYS  689

Query  709  VEIWKRFRKWGGIPTGITQNVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKIS  768
             EIWKRFRKWGGIPTG TQNVKDLL S EIENI++N+DF+ +LNQASGDR ILA +L++S
Sbjct  690  AEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLS  749

Query  769  KPQLKYVTNSNEGEGLLFFGNTIVPFIDKFPKDTILYKKMTTKPEEV  815
              Q KY+ NS+ GEGLL+F N ++PF + +P +T LYK MTT+ +EV
Sbjct  750  TEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

40) RHOM_15395 in NC_015977


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  645 bits (2437),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 388/766 (51%), Positives = 558/766 (73%), Gaps = 1/766 (0%)

Query  43   KNAEKPTTAQKTITFQKMYRDGICQVTSGFYTKMVEFYDINYDLLEIEDKGEILEEYSRL  102
            K   +P TAQ++I ++ MY DG+C+V++G ++K +EF DI+Y+L + + +  I+E    L
Sbjct  31   KGDGRPHTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDL  90

Query  103  INYFDPSIKFELFLFNRQVNEQTLIDQFDIPLQADDFDDIREEYTQMLKKQAAKGNNGII  162
             NY D+SI +++ ++NR+V+       F+I+ Q+DDFDDIR EYT +L+KQ A+GNNG++
Sbjct  91   YNYVDASIHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMV  150

Query  163  KSKYLIFGIESKGFKEARAKLVSIEADVIKNLTNLGTHAKSLDGKERLRILHEYFNQDTM  222
            K+KYL F IE+ + K ARA+L  I  D++  + ++G+ A  +DG ERL +LH  ++ D  
Sbjct  151  KTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG-  209

Query  223  EPFRFSFKELAESGKSVKDYIAPPGFDFRYPSRFKAGKMYGSVHYLDIIAPKFddellkk  282
            E F F  K LA SG S KD+IAP+++ F  +  F  G  YG+V +L+I++P + D++L  
Sbjct  210  EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLAD  269

Query  283  lldldANLTITMHMQTMDPVKAIKMLKGALTNIQKMKIEEQKKAVRSGYDMDILPTDIIT  342
            +L+ ++ + + +H+Q+++  KAIK +K  +T+++ MKI EQKKAVRSGYDMDILP+D+ T
Sbjct  270  FLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLAT  329

Query  343  YEKdtldllddlNSSNQKMVKMTFLLTCYGRNKRELENITQRVSGIIQQANCNLRCMQYL  402
            Y  D+  LL  L++ N+++ ++TFL+   +  K+ L+N   + +G+ Q+ NC L  ++Y 
Sbjct  330  YGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQ  389

Query  403  QEQGLMASAPIGCNDTGIERDLTTKSTAILVPFCTQELFMPAPAIYYGLNALSNNMIMAD  462
            QEQGL +S P+G N+  I+R LTT S A++VPF TQELF  ++A+YYG+NA S NMIM D
Sbjct  390  QEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLD  449

Query  463  RKRLRTPNGVILGTPGSGKSFSAKREILSCFLMTKDDIVVCDPEGEYFALVGALHGQVVR  522
            RK+ R PN++ LGTPGSGKS S K EI+S FL T DDI + DPE+EY++LV  LHGQV+R
Sbjct  450  RKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIR  509

Query  523  LATNSKDYLNPMDIQLSHKGDKEALKLKSDFIITLCDLIAGGKNGLENDEKGIIDECIRH  582
            L+  SKD++NP+DI+L+   D ++L LKSDF++++C+L+ GGKNGLE  EK +ID  +R 
Sbjct  510  LSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRV  569

Query  583  IYDAYFENPVPENMPILEDLYNALLEHKNKKAERIANSLVLYVHGSQNYFNHRTNVDSQN  642
            IY +Y+ +P PENMPIL DL +ALL++    A+R+A++L LYV GS N FNHRTNVD  N
Sbjct  570  IYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGN  629

Query  643  RIMCFDIRDLGNQLKELGMLIVQDAVWNRVSQNRERKIATRYYCDEFHLLLKEKQTAIYS  702
            R++ FDI++LG+QLK LGMLIVQD +W RV+ NR +  AT+Y+ DEFHLLLKE QTA YS
Sbjct  630  RLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYS  689

Query  703  VEIWKRFRKWGGIPTGLTQNVGDFLKSEEIEGILGNSDFVYLLNQNAKDQAILADKLGLS  762
             EIWKRFRKWGGIPTG TQNV D+L S EIE IL NSDF+ LLNQ + D+ ILA++L LS
Sbjct  690  AEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLS  749

Query  763  EKQLAHVTNSEPGCGLILFDNVVIPFVDKYPVDTKTFAVMNTKPEE  808
              Q   + NSEPG GL++F+NVV+PF +  P +T+ + +M T+ +E
Sbjct  750  TEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNE  795

41) RUM_20000 in NC_021039


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  645 bits (2436),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/797 (50%), Positives = 583/797 (74%), Gaps = 8/797 (1%)

Query  15   SKSKVVMGKPASQLTKEDKKILSARMAEIKSANGGKTTVQSTIPYMCMYKDGVCQVSENF  74
            SK  +      ++LT+ ++K + A +   K ++G   T Q +IPY  MY DGVC+VS   
Sbjct  2    SKKEIPRETEKTKLTRAQRKEIDAVIRKYK-GDGRPHTAQQSIPYEVMYPDGVCRVSPGV  60

Query  75   FSMTVQFYDANYSISEFEEQNNIFSKYCDVINLFDNTIKFQLTFENQNRSKEKLLKTVQI  134
            FS  ++F D +Y +++ + Q  IF K CD+ N  D +I +Q++F N++    +  K+ +I
Sbjct  61   FSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNRKVDPVQYAKSFEI  120

Query  135  PEQKDDFNAIRKEYSEMLTDKLMKGSNGQSARKFLTFGIESASYKAARAKLLSIKNDVIK  194
            + Q DDF+ IR EY+ +L  +L +G+NG    K+LTF IE+ S KAARA+L  I  D++ 
Sbjct  121  APQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKAARARLKRIGFDLLG  180

Query  195  GFKAFGVEAKLLDGRQRLEALYYALNPYRNSPFIFDWDSMLHAGMDTKDSISPSSLKFNK  254
             FK+ G  A ++DG++RL+ L    +P     F FDW  +  +G+ TKD I+PSSL F +
Sbjct  181  YFKSMGAVAHVMDGWERLNLLHGVYHP-DGEIFNFDWKWLAPSGLSTKDFIAPSSLCFGN  239

Query  255  A-DFEIGNAYGAVWGMNILAGELSDEILKDFLEMQNLFCVNIHVDPLDQIAALKFVKKKL  313
            A  F +G  YGAV  ++IL+ ELSD++L DFL+ ++   VN+HV++++Q  A+K +K+K+
Sbjct  240  AKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQAIEQTKAIKTIKRKI  299

Query  314  TNVEQMKIDEQKKASQSGYDPDILPPAIKMYIEDIEKLLADLNSKNERLFHISISLRAYA  373
            T+++ MKI EQKKA +SGYD DILP+ +  Y ED  KLL+ L+++NERLF++++ +   A
Sbjct  300  TDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRNERLFQLTFLVLNVA  359

Query  374  kskkelkllsemlkRVCQKNNCTMFPYDYRQEQTLVSTLPLCYNKIPVRREMHTSGIAIF  433
             +K+ L+        V QK+NC +   DY+QEQ L S+LPL  N+I ++R + TS++A+F
Sbjct  360  DTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQIKIQRSLTTSSVAVF  419

Query  434  VPFTTKELFQDGQATYYGINTLSGNMIRANRSRLKNPNGLILGTPGAGKSFSVKREILDC  493
            VPF T+ELFQ+G A YYGIN+ S NMI  +R + + PN+L LGTPG+GKS S K EI+  
Sbjct  420  VPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPGSGKSMSCKSEIVSV  479

Query  494  FLTTVDDIIICDPEGEYYPLVSALHGQLIRIASNSEQHLNPMDITIDDFLFSNPMEVIAN  553
            FLTT DDI+I DPE+EYYPLV  LHGQ+IR+++ S + +NP+DI ++   +S+  + +A 
Sbjct  480  FLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINLN---YSEDDNPLAL  536

Query  554  KSDFLISLCEIVVGGRYGLSAEERSVIDKCVQSIYKHFIENEPTPEKMPLLSDLQQEL-N  612
            KSDF++S+CE+V+GG+ GL A E++VID+ V+ IY+ ++  +P PE+MP+LSDL++ L +
Sbjct  537  KSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYL-ADPRPENMPILSDLHKALLD  595

Query  613  KEGEVALRVANSLEMFVNGSQNLFNHRTNIDMSNRIICFDIKELGNQLKKVGMLIVQDTV  672
            ++   A RVA++L+++V+GS N+FNHRTN+D++NR++ FDIKELG+QLKK+GMLIVQD +
Sbjct  596  QHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKKLGMLIVQDQI  655

Query  673  WNRVSANREKKKITRYYIDEFHLLLKEEQTAKYSAEIWKRFRKWGGVPTGITQNVKDLLS  732
            W RV+ANR + K T+Y+ DEFHLLLKEEQTA YSAEIWKRFRKWGG+PTG TQNVKDLLS
Sbjct  656  WGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTGATQNVKDLLS  715

Query  733  SQEVENIFDNSDFVYMLNQAAGDRDILAEKLHISKEQMKFVTNSGPGEGLIRYDKVLLPF  792
            S E+ENI++NSDF+ +LNQA+GDR ILAE+L++S EQ K++ NS PGEGL+ +++V+LPF
Sbjct  716  SPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGLLIFENVVLPF  775

Query  793  TDHFPMDTEMYKLMTTK  809
            T+ +P +T++YK+MTT+
Sbjct  776  TNPIPHNTQLYKIMTTR  792

42) CKL_0284 in NC_009706


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  642 bits (2425),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 381/762 (50%), Positives = 591/762 (78%), Gaps = 5/762 (0%)

Query  23   QSAQQTIPYKEMLKDGICKVREGYYTKTLSYEDINYAVASSDDQSTIFDGYCGFLNYFDS  82
            ++AQQ+IPY  M  DG+C+V  G ++K + + DI+Y +A +D Q++IF+  C++ NY D+
Sbjct  37   HTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDA  96

Query  83   ALPFQLSFINHRSRPENRY--SVNISPQDDDFNSIRGEFTAMLENQIAKSNNGIVRSKYI  140
            ++ +Q+SF+N++  P  +Y  S +I+PQ+DDF+ IR+E+T++L++Q+A++NNG+V++KY+
Sbjct  97   SIHIQFSFLNRKVDP-VQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYL  155

Query  141  TFGINANGIAAARPRLERIEADIVGNFKKLGVQSATLSGRERLEVLHSQLHPGGREPFRF  200
            TF I+A+++ AAR+RL RI  D++G FK +G  +  + G+ERL++LH+  HP+G E F F
Sbjct  156  TFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG-EIFNF  214

Query  201  SWDMIPKTGMGTKDFIAPTSFDFRQSRAFRVGTTWGAALYMQIMASELSDKLLAELLEVD  260
             W  ++ +G++TKDFIAP+S+ F ++++F +G   GA  ++QI+++ELSD +LA++L+ +
Sbjct  215  DWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTE  274

Query  261  AEMTITLHIqtvdqtkavktvkakltdIDRMKMDEQKKAARAGYDIDILPPDLLTYSKDA  320
            + + + LH+Q+++QTKA+KT+K K+TD+D MK+ EQKKA R+GYD+DILP+DL TY+ DA
Sbjct  275  SGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDA  334

Query  321  AALLADLQSRNERMFLLTFLVVNTAPTRQQLENDIFTVSGITQKYNCFLKRLDFQQEQGF  380
              LL+ LQ+RNER+F LTFLV+N A T+Q+L+ND+F  +G++QK NC L RLD+QQEQG+
Sbjct  335  KKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGL  394

Query  381  MSSLPLGYNGIEIQRGMTTSSTAIFVPFMTQELRMDGQALYYGMNALSHNVIMADRKKLK  440
             SSLPLG N I IQR++TTSS A+FVPF+TQEL  +G A+YYG+NA S+N+IM DRK+ +
Sbjct  395  ASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQAR  454

Query  441  SANGLYLGSTGSGKSFAAKRELINVFLATKDRIIVVDPMGEYAPLVRRLGGEVIEISPDS  500
             +N+L LG+ GSGKS + K E+++VFL+T D I++ DP +EY PLV+RL G+VI +SP S
Sbjct  455  CPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTS  514

Query  501  PHNINPMDLKLNLAGEDSPLSMKADFLLSLCELIIGGKEGLQPIEKTVIDRCVRLVYREL  560
             + +NP+D++LN + +D+PL++K+DF+LS+CEL++GGK+GL++IEKTVIDR VR++YR  
Sbjct  515  KDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPY  574

Query  561  ALGIGDGKMPLLQDLYESLCQQPEPEARRIATALELYCTGSLNMFNHPTNVQTDNRITCI  620
              +    +MP+L DL  +L +Q  PEA R+A AL+LY +GSLN+FNH TNV+ +NR+  +
Sbjct  575  LADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSF  634

Query  621  VLKSMGENLRKIAMHITNELVTQAVDENFSRSLATWCYYDEFHILLQDALSASYFVREWK  680
             +K +G +L+K++M I ++ +   V  N S++ ATW + DEFH+LL++  +A+Y    WK
Sbjct  635  DIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWK  694

Query  681  MLRKKGCVPSALTQNVKDLLASREIENILENSDFMILLSQAQGDRAILAKQLGISEHQLS  740
             +RK G +P++ TQNVKDLL+S EIENILENSDF+ LL+QA GDR ILA +L +S +Q  
Sbjct  695  RFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQK  754

Query  741  YIAHSNSGEGLLFFGNTTIPFVDRFPRG-EIYNLLTTRPEDI  781
            YI +S++GEGLL+F N  +PF + +P+  ++Y+++TTR +++
Sbjct  755  YIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

43) Closa_0291 in NC_014376


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  639 bits (2414),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 378/762 (50%), Positives = 592/762 (78%), Gaps = 5/762 (0%)

Query  23   QSAQQTIPYKEMLKDGICKVREGYYTKTLSYEDINYAVASSEDQSTIFDGYCGFLNYFDS  82
            ++AQQ+IPY  M  DG+C+V  G ++K + + DI+Y +A ++ Q++IF+  C++ NY D+
Sbjct  37   HTAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDA  96

Query  83   ALPFQLSFINHRSRPENRY--SVNISPQDDDFNSIRGEFTAMLENQIAKSNNGIVRSKYI  140
            ++ +Q+SF+N++  P  +Y  S +I+PQ+DDF+ IR+E+T++L++Q+A++NNG+V++KY+
Sbjct  97   SIHIQFSFLNRKVDP-VQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYL  155

Query  141  TFGIHADGIAAARPRLERIEADIIGNFKKLGVQSATLSGRERLEVLHSQLHPGGKEKFIF  200
            TF I+A+++ AAR+RL RI  D++G FK +G  +  + G+ERL++LH+  HP+G E F F
Sbjct  156  TFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG-EIFNF  214

Query  201  SWDMIPKTGIGTKDFIAPTSFDFRQSRAFRVGTTWGAALYMQIMASELSDKLLAELLEVD  260
             W  ++ +G++TKDFIAP+S+ F ++++F +G   GA  ++QI+++ELSD +LA++L+ +
Sbjct  215  DWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTE  274

Query  261  AEMTITLHIqtvdqtkavktvkakltdIDRMKMDEQKKAARAGYDIDILPPDLLTYSKDA  320
            + + + LH+Q+++QTKA+KT+K K+TD+D MK+ EQKKA R+GYD+DILP+DL TY+ DA
Sbjct  275  SGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDA  334

Query  321  AALLADLQSRNERMFLLTFLVVNTAPTRQQLENDIFTVSGITQKYNCFLKRLDFQQEQGF  380
              LL+ LQ+RNER+F LTFLV+N A T+Q+L+ND+F  +G++QK NC L RLD+QQEQG+
Sbjct  335  KKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGL  394

Query  381  MSSLPLGWNGIEIQRGMTTSSTAIFVPFMTQELRMDGQALYYGMNALSHNVIMADRKKLK  440
             SSLPLG N I IQR++TTSS A+FVPF+TQEL  +G A+YYG+NA S+N+IM DRK+ +
Sbjct  395  ASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQAR  454

Query  441  SANGLYLGSTGSGKSFAAKRELINVFLATKDRIIVVDPMGEYAPLVRRLGGEVIEISPNS  500
             +N+L LG+ GSGKS + K E+++VFL+T D I++ DP +EY PLV+RL G+VI +SP S
Sbjct  455  CPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTS  514

Query  501  PHHINPMDLKLNLAGEDSPLSMKADFLLSLCELIIGGKEGLQPIEKTVIDRCVRLVYREL  560
             + +NP+D++LN + +D+PL++K+DF+LS+CEL++GGK+GL++IEKTVIDR VR++YR  
Sbjct  515  KDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPY  574

Query  561  ALGIGDGKMPLLQNLYETLCQQPEPEARRIATALELYCTGSLNMFNHPTNVQTDSRITCI  620
              +    +MP+L +L  +L +Q  PEA R+A AL+LY +GSLN+FNH TNV+ ++R+  +
Sbjct  575  LADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSF  634

Query  621  VLKSMGENLRKIAMHITNELVTQAVDENFSRSLATWCYYDEFHILLQDALSASYFVRVWK  680
             +K +G +L+K++M I ++ +   V  N S++ ATW + DEFH+LL++  +A+Y   +WK
Sbjct  635  DIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWK  694

Query  681  MLRKKGCVPSALTQNVKDLLASREIENILENSDFMILLSQAQGDRAILAKQLGISEHQLS  740
             +RK G +P++ TQNVKDLL+S EIENILENSDF+ LL+QA GDR ILA +L +S +Q  
Sbjct  695  RFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQK  754

Query  741  YIAHSNSGEGLLFFGNTTIPFVDRFPRG-EIYNLLTTRPEDI  781
            YI +S++GEGLL+F N  +PF + +P+  ++Y+++TTR +++
Sbjct  755  YIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

44) SSUD9_1136 in NC_017620


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  638 bits (2413),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 385/763 (51%), Positives = 567/763 (75%), Gaps = 12/763 (1%)

Query  52   TVEDTIPIEKVYENGICRLTDGYFTKMIAFEDINYQLALEEQRDYIFNQFASFLNSFDNN  111
            T +++IP E +Y +G+CR++ G F+K I F DI+YQLA  + +  IF+++  + N  D +
Sbjct  38   TAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDAS  97

Query  112  TRLQLCFTNQLGRLEELADAITIPIKNDGLEEIRSEFRTMLQNQLEKGNNGLRQTKYIVF  171
             ++Q+ F N+     + A ++ I+ + D++++IR+E+  +LQ+QL +GNNG+ +TKY+ F
Sbjct  98   IHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTF  157

Query  172  GVKEDSYRQAKVVLSRLEIDLQAHLKGMGIRSTVLNGFERLIVLHHILNPTEHLSTL---  228
             +  +S + A+  L R+ +DL + +K+MG  + V++G ERL +LH + +P  ++  +   
Sbjct  158  TIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWK  217

Query  229  ---PDELENRDCRSIIVPDKIHFQK-KYFSMDNVLCQTSHVQILASELSDRFLTELLSLE  284
               P  L  +D   +I P  + F + K F+M+      S +QIL++ELSD  L+++L+ E
Sbjct  218  WLAPSGLSTKD---FIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTE  274

Query  285  ENMVLSLHIQALDQVDAIKLVKRKFTDVQRMTMEEQKKAYRSGYDLDIIPSDLMTYGTDL  344
              ++++LH+QA++Q  AIK +KRK+TD++ M + EQKKA RSGYD+DI+PSDL TYG D 
Sbjct  275  SGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDA  334

Query  345  KHLLNDLQSRDEKMFLVSFIILNQGLSKAKLDNAVSQLATICSRHNCMLKCLDYQQEQGL  404
            K LL  LQ+R+E++F ++F++LN + +K KL+N V Q A +  +HNC L  LDYQQEQGL
Sbjct  335  KKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGL  394

Query  405  ISALPLGMNCIKIKRQLTTSSTAVFIPFTTEELFMTSSTSIYYGLNAISHNLIMADRKKL  464
             S+LPLG+N IKI+R LTTSS AVF+PF T+ELF  +++++YYG+NA S+N+IM DRK+ 
Sbjct  395  ASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIMLDRKQA  453

Query  465  KNPNGLILGTPGSGKSFSAKREITNAILVTGDDILICDPEGEYGALVEAFGGEVIHVSAK  524
            + PN+L LGTPGSGKS S K EI + +L T DDI+I DPE+EY +LV  + G+VI++S+ 
Sbjct  454  RCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPT  513

Query  525  SKDYLNPLDINFNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAAEKSVIDRCLPKIYEA  583
            SKD++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR +  IY +
Sbjct  514  SKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRP  573

Query  584  YFENPIPENMPILQDLYELLLKQEESVGRKLATEMEIYVTGSLNVFNHRSNVDLNKSLLC  643
            Y+ +P PENMPIL DL   LL Q+ + + ++A  +++YV+GSLNVFNHR+NVD+ + L+ 
Sbjct  574  YLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVS  633

Query  644  FDIKELGTQLKKIGMLVIQDQVWNKVSQNRQSQKSTRYYIDEFHLLLKEEQTAQYSVEIW  703
            FDIKELG QLKK+GML++QDQ+W +V+ NR   K+T+Y+ DEFHLLLKEEQTA YS EIW
Sbjct  634  FDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIW  693

Query  704  KRFRKWGGIPTGLTQNVKDLLASKEIENVFDNTDFIMMLNQASGDREILARKLKISPYQL  763
            KRFRKWGGIPTG TQNVKDLL+S EIEN+++N+DFI +LNQASGDR ILA +L++S  Q 
Sbjct  694  KRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQ  753

Query  764  NYVTNSNAGEGLLFFGNTIVPFLDQFPKNTLLYQKMTTKPEEV  806
            +Y+ NS++GEGLL+F N ++PF + +P NT LY+ MTT+ +EV
Sbjct  754  KYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

45) RHOM_13655 in NC_015977


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 382/770 (50%), Positives = 585/770 (76%), Gaps = 7/770 (0%)

Query  14   KAKNRAALSAQQTIPYVAMHPDGVCKLPGGLYTKTVEYEDINYSVASTEDQTAIFGGWSS  73
            K+  R+  +AQQ+IPY  M PDGVC+++ G+++K +E+ DI+Y +A  + QTAIF     
Sbjct  31   KGDGRPH-TAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCD  89

Query  74   FLNYFDSSLPFQLSFINRRSHSRSRY--KVNIPQADDDFNSVREEFTGMLKNQIARSNNG  131
            + NY D+S+ +Q+SF+NR+ ++  +Y    +I+  +DDF+ +R E+TG+L++Q+A +NNG
Sbjct  90   LYNYVDASIHIQFSFLNRKVDP-VQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNG  148

Query  132  IERSKYITFGIPAGGIVEARPRLERVEADVMGNFKRLGVPCEPMDGRARLALLHSQMHPG  191
            + ++KY+TF I A ++  AR+RL R+  D++G FK +G   + MDG+ RL LLH+  HP+
Sbjct  149  MVKTKYLTFTIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPD  208

Query  192  NREPFRFSWKDIPQTGLGTKDYIAPDSFDFRHSRLFRVGQYWGAVSYLQILASELSDKll  251
              E F F WK ++ +GL+TKD+IAP S+ F +++ F +G   GAVS+LQIL++ELSD +L
Sbjct  209  G-EIFNFDWKWLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDML  267

Query  252  aemleldaemTVTLHIQTVDQLKAIKTIKGKISDIGKMKVEEQRKAVRAGYDPDILPPDL  311
            A+ L+ ++ + V LH+Q+++Q KAIKTIK KI+D++ MK+ EQ+KAVR+GYD DILP+DL
Sbjct  268  ADFLNTESGVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDL  327

Query  312  ITFSKDAAELLADLQSRNERMFLLTFTVVNMAPTRQRLENDVFTVGGIAQKYNCALKRLD  371
             T++ DA  LL+ LQ+RNER+F LTF V+N+A T+Q+L+NDVF  +G+AQK NC+L RLD
Sbjct  328  ATYGEDAKKLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLD  387

Query  372  WQQEQGFVSSLALGYNEVEIQRGMTTSSTAIFIPFMTRELRMDGQALYYGMNALSHNVIM  431
             QQEQG+ SSL+LG N++ IQR++TTSS A+F+PF+T+EL  +G A+YYG+NA S+N+IM
Sbjct  388  YQQEQGLASSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIM  447

Query  432  ADRKKLKSANGMYLGSTGSGKSFAAKRELLNVFLTIPQDRIIIVDPMGEYAPLVRRLGGQ  491
             DRK+ + +N++ LG+ GSGKS + K E+++VFLT P+D I+I DP +EY PLV+RL GQ
Sbjct  448  LDRKQARCPNALKLGTPGSGKSMSCKSEIVSVFLTTPDD-IFISDPEAEYYPLVKRLHGQ  506

Query  492  VIEIAPDSHHHLNPMDVELNMAAGESPLSMKADFLLSLCELVVGGKEGLQPIEKTVVDRC  551
            VI ++P S + +NP+D++LN + +++PL++K+DF+LS+CELV+GGK+GL++IEKTV+DR 
Sbjct  507  VIRLSPTSKDFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRA  566

Query  552  VRLVYREQALGLDTGKTPLLQDLYEELLKQPEPEARRVATALELYCTGSLNLFNHPTNVK  611
            VR++YR    +    + P+L DL   LL Q  PEA RVA AL+LY +GSLN+FNH TNV 
Sbjct  567  VRVIYRPYLADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVD  626

Query  612  TDSRVVCIVLKNMGENLRKIAMHITNEFVSQAVDTNFREGVATWCYFDEFHVLLRDPLTA  671
             ++R+V + +K++G +L+K++M I ++ +   V +N  +G ATW + DEFH+LL++  TA
Sbjct  627  IGNRLVSFDIKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTA  686

Query  672  SYFVAVWKMLRKKGCVPSALTQNVKDLLASREIENILDNTDFMILLSQAQSDRAILARQL  731
            +Y   +WK +RK G +P++ TQNVKDLL+S EIENIL+N+DF+ LL+QA +DR ILA +L
Sbjct  687  AYSAEIWKRFRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERL  746

Query  732  GISEHQLSYITHSNSGEGLLFYGNVTIPFVDRFP-KGEIYDLLTTRPEDM  780
             +S +Q  YI +S++GEGLL++ NV +PF + +P + ++Y ++TTR +++
Sbjct  747  NLSTEQQKYIDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

46) CKR_0238 in NC_011837


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  629 bits (2376),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 375/751 (50%), Positives = 582/751 (78%), Gaps = 5/751 (0%)

Query  1    MLKDGICKVREGYYTKTLSYEDINYAVASSDDQSTIFDGYCGFLNYFDSALPFQLSFINH  60
            M  DG+C+V  G ++K + + DI+Y +A +D Q++IF+  C++ NY D+++ +Q+SF+N+
Sbjct  48   MYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDASIHIQFSFLNR  107

Query  61   RSRPENRY--SVNISPQDDDFNSIRGEFTAMLENQIAKSNNGIVRSKYITFGINANGIAA  118
            +  P  +Y  S +I+PQ+DDF+ IR+E+T++L++Q+A++NNG+V++KY+TF I+A+++ A
Sbjct  108  KVDP-VQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTFTIEAESVKA  166

Query  119  ARPRLERIEADIVGNFKKLGVQSATLSGRERLEVLHSQLHPGGREPFRFSWDMIPKTGMG  178
            AR+RL RI  D++G FK +G  +  + G+ERL++LH+  HP+G E F F W  ++ +G++
Sbjct  167  ARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDG-EIFNFDWKWLAPSGLS  225

Query  179  TKDFIAPTSFDFRQSRAFRVGTTWGAALYMQIMASELSDKLLAELLEVDAEMTITLHIqt  238
            TKDFIAP+S+ F ++++F +G   GA  ++QI+++ELSD +LA++L+ ++ + + LH+Q+
Sbjct  226  TKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVLVNLHVQA  285

Query  239  vdqtkavktvkakltdIDRMKMDEQKKAARAGYDIDILPPDLLTYSKDAAALLADLQSRN  298
            ++QTKA+KT+K K+TD+D MK+ EQKKA R+GYD+DILP+DL TY+ DA  LL+ LQ+RN
Sbjct  286  IEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLLTKLQTRN  345

Query  299  ERMFLLTFLVVNTAPTRQQLENDIFTVSGITQKYNCFLKRLDFQQEQGFMSSLPLGYNGI  358
            ER+F LTFLV+N A T+Q+L+ND+F  +G++QK NC L RLD+QQEQG+ SSLPLG N I
Sbjct  346  ERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSLPLGVNQI  405

Query  359  EIQRGMTTSSTAIFVPFMTQELRMDGQALYYGMNALSHNVIMADRKKLKSANGLYLGSTG  418
             IQR++TTSS A+FVPF+TQEL  +G A+YYG+NA S+N+IM DRK+ + +N+L LG+ G
Sbjct  406  KIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNALKLGTPG  465

Query  419  SGKSFAAKRELINVFLATKDRIIVVDPMGEYAPLVRRLGGEVIEISPDSPHNINPMDLKL  478
            SGKS + K E+++VFL+T D I++ DP +EY PLV+RL G+VI +SP S + +NP+D++L
Sbjct  466  SGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFVNPLDINL  525

Query  479  NLAGEDSPLSMKADFLLSLCELIIGGKEGLQPIEKTVIDRCVRLVYRELALGIGDGKMPL  538
            N + +D+PL++K+DF+LS+CEL++GGK+GL++IEKTVIDR VR++YR    +    +MP+
Sbjct  526  NYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADPRPENMPI  585

Query  539  LQDLYESLCQQPEPEARRIATALELYCTGSLNMFNHPTNVQTDNRITCIVLKSMGENLRK  598
            L DL  +L +Q  PEA R+A AL+LY +GSLN+FNH TNV+ +NR+  + +K +G +L+K
Sbjct  586  LSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKELGKQLKK  645

Query  599  IAMHITNELVTQAVDENFSRSLATWCYYDEFHILLQDALSASYFVREWKMLRKKGCVPSA  658
            ++M I ++ +   V  N S++ ATW + DEFH+LL++  +A+Y    WK +RK G +P++
Sbjct  646  LGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRKWGGIPTG  705

Query  659  LTQNVKDLLASREIENILENSDFMILLSQAQGDRAILAKQLGISEHQLSYIAHSNSGEGL  718
             TQNVKDLL+S EIENILENSDF+ LL+QA GDR ILA +L +S +Q  YI +S++GEGL
Sbjct  706  ATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDNSEPGEGL  765

Query  719  LFFGNTTIPFVDRFPRG-EIYNLLTTRPEDI  748
            L+F N  +PF + +P+  ++Y+++TTR +++
Sbjct  766  LIFENVVLPFTNPIPHNTQLYKIMTTRLNEV  796

47) EUBREC_0779 in NC_012781


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  505 bits (1903),  Expect = 5e-144, Method: Compositional matrix adjust.
 Identities = 316/577 (55%), Positives = 453/577 (79%), Gaps = 1/577 (0%)

Query  2    IPKTGLSTKDFIAPdsfdfrfsrlfrVGTTWGAASYLQILASELSDKllaellemdaemT  61
            ++ +GLSTKDFIAP S+ F  ++ F +G   GA S+LQIL++ELSD +LA++L+ ++ + 
Sbjct  219  LAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVL  278

Query  62   ITLHIQTVDQaaavksikakvsDIDKMKVEEQKKAARSGYDMDILPPDLVTYSNDAKTLL  121
            + LH+Q+++Q+ A+K+IK K++D+D MK+ EQKKA RSGYDMDILP+DL TY++DAK LL
Sbjct  279  VNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLL  338

Query  122  EDLQSRNERMFLLTFLVVNMAPTRRELDNDLFTVSGIVQKYNCTLKRLDFQQEDGFLSSL  181
              LQ+RNER+F LTFLV+N+A T++ L+ND+F  +G+ QK NC L RLD+QQE+G+ SSL
Sbjct  339  TKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSL  398

Query  182  PLGHNGIEIKRGMTTSSTAIFVPFMTQELRMDGEAVYYGLNALSHNVIMANRKKLKNPNG  241
            PLG N I I+R++TTSS A+FVPF+TQEL  +G A+YYG+NA S+N+IM +RK+ + PN+
Sbjct  399  PLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNA  458

Query  242  LFLGVPGSGKSFAAKRELVNVFLATRDRIIVVDPMGEYSPLIKRLGGQVIEIAPDSPHHI  301
            L LG PGSGKS + K E+V+VFL+T D I++ DP +EY PL+KRL GQVI ++P S + +
Sbjct  459  LKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFV  518

Query  302  NPMDIDLSF-DEENPMALKADFILSLMELIVGGKDGLQPVERTVIDRCVRQMYREHLQDP  360
            NP+DI+L++ +++NP+ALK+DF+LS+ EL++GGK+GL+++E+TVIDR VR +YR  L DP
Sbjct  519  NPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADP  578

Query  361  ETSKMPTLQTLYDLLCSQPEGEAVRLATALEIYVSGSLNVFNHETNVDLNRRLVCLDLKK  420
               +MP L  L   L  Q   EA R+A AL++YVSGSLNVFNH TNVD+  RLV +D+K 
Sbjct  579  RPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKE  638

Query  421  LGAGLRTIAMLIMQDLVNSQVSMNFLRGIATWCYFDEFHVLLRDRLTASYCVAIWKMLRK  480
            LG  L+ ++MLI+QD + ++V+ N  +G ATW + DEFH+LL++  TA+Y   IWK +RK
Sbjct  639  LGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRK  698

Query  481  KGCVPSALTQNVKDFLASPEIENIFENSDFLVLLSQAQGDRQILAKQLGISPHQLSYVTH  540
             G +P++ TQNVKD+L+SPEIENI+ENSDF+ LL+QA GDR+ILA +L +S +Q  Y+ +
Sbjct  699  WGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDN  758

Query  541  TNSGEGLLFFGNTTIPFVDRFPQNTELYAIMTTRPED  577
            +++GEGLL+F N  +PF + +P+NT+LY IMTTR ++
Sbjct  759  SEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNE  795

48) EUBREC_2716 in NC_012781


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  505 bits (1903),  Expect = 5e-144, Method: Compositional matrix adjust.
 Identities = 316/577 (55%), Positives = 453/577 (79%), Gaps = 1/577 (0%)

Query  2    IPKTGLSTKDFIAPdsfdfrfsrlfrVGTTWGAASYLQILASELSDKllaellemdaemT  61
            ++ +GLSTKDFIAP S+ F  ++ F +G   GA S+LQIL++ELSD +LA++L+ ++ + 
Sbjct  219  LAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGVL  278

Query  62   ITLHIQTVDQaaavksikakvsDIDKMKVEEQKKAARSGYDMDILPPDLVTYSNDAKTLL  121
            + LH+Q+++Q+ A+K+IK K++D+D MK+ EQKKA RSGYDMDILP+DL TY++DAK LL
Sbjct  279  VNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKLL  338

Query  122  EDLQSRNERMFLLTFLVVNMAPTRRELDNDLFTVSGIVQKYNCTLKRLDFQQEDGFLSSL  181
              LQ+RNER+F LTFLV+N+A T++ L+ND+F  +G+ QK NC L RLD+QQE+G+ SSL
Sbjct  339  TKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASSL  398

Query  182  PLGHNGIEIKRGMTTSSTAIFVPFMTQELRMDGEAVYYGLNALSHNVIMANRKKLKNPNG  241
            PLG N I I+R++TTSS A+FVPF+TQEL  +G A+YYG+NA S+N+IM +RK+ + PN+
Sbjct  399  PLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARCPNA  458

Query  242  LFLGVPGSGKSFAAKRELVNVFLATRDRIIVVDPMGEYSPLIKRLGGQVIEIAPDSPHHI  301
            L LG PGSGKS + K E+V+VFL+T D I++ DP +EY PL+KRL GQVI ++P S + +
Sbjct  459  LKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKDFV  518

Query  302  NPMDIDLSF-DEENPMALKADFILSLMELIVGGKDGLQPVERTVIDRCVRQMYREHLQDP  360
            NP+DI+L++ +++NP+ALK+DF+LS+ EL++GGK+GL+++E+TVIDR VR +YR  L DP
Sbjct  519  NPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLADP  578

Query  361  ETSKMPTLQTLYDLLCSQPEGEAVRLATALEIYVSGSLNVFNHETNVDLNRRLVCLDLKK  420
               +MP L  L   L  Q   EA R+A AL++YVSGSLNVFNH TNVD+  RLV +D+K 
Sbjct  579  RPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDIKE  638

Query  421  LGAGLRTIAMLIMQDLVNSQVSMNFLRGIATWCYFDEFHVLLRDRLTASYCVAIWKMLRK  480
            LG  L+ ++MLI+QD + ++V+ N  +G ATW + DEFH+LL++  TA+Y   IWK +RK
Sbjct  639  LGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKRFRK  698

Query  481  KGCVPSALTQNVKDFLASPEIENIFENSDFLVLLSQAQGDRQILAKQLGISPHQLSYVTH  540
             G +P++ TQNVKD+L+SPEIENI+ENSDF+ LL+QA GDR+ILA +L +S +Q  Y+ +
Sbjct  699  WGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKYIDN  758

Query  541  TNSGEGLLFFGNTTIPFVDRFPQNTELYAIMTTRPED  577
            +++GEGLL+F N  +PF + +P+NT+LY IMTTR ++
Sbjct  759  SEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNE  795

49) Rumal_3886 in NC_014825


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  499 bits (1882),  Expect = 3e-142, Method: Compositional matrix adjust.
 Identities = 309/763 (41%), Positives = 521/763 (69%), Gaps = 9/763 (1%)

Query  188  TVQKTLPYQRVCDDYIFKVDDNRYSKTYKFEDINYQIAKQDEQESIFLGYCSVLNSFDTN  247
            T Q+++PY+ +  D + +V    +SK   F DI+YQ+A+ D Q +IF   C + N  D++
Sbjct  38   TAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDAS  97

Query  248  ADIQITVHNNRVNRADFERMVLIGHKGDGYDNYRDEYNDMLIEKMEQGQNGIIRNKYITV  307
             +IQ++  N +V+  ++ +   I+ +GD++D+ R EY ++L  ++ +G+NG+++ KY+T 
Sbjct  98   IHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTF  157

Query  308  TLQAADLENAQTKFNTIDLELLNAFKKVGSNIKALTSNERICLLKDIFRNVDEEIPELTA  367
            T++A  +  A+++++ I+++LL  FK +G+    + + ER+ LL ++++  D EI ++  
Sbjct  158  TIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHP-DGEIFNFDW  216

Query  368  KHFKRQA--ERGYCCPDYLEF--KKHYFMWGDKYARTMFIKDMPASLKDNLLTDIANTNL  423
            K +   +   +++  P  L F   K + M G+KY+   F++ +++ L D++L+D+ NT+ 
Sbjct  217  KWLAPSGLSTKDFIAPSSLCFGNAKTFGM-GGKYGAVSFLQILSPELSDDMLADFLNTES  275

Query  424  DVMVTVNIAPVDPYKALKIVNHQLTSMRANKLQAEKKAIQSGYTSDVINEDLKHSLIEAE  483
            +V+V +++ +++  KA+K +++++T + A K+  +KKA++SGY  D++  DL     +A 
Sbjct  276  GVLVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAK  335

Query  484  ELLDDLRSKNQKMFLDNIIIMVTAKDMEELESNTEAIEAVVRKHICSLSTLKFQQEKGLQ  543
             LL  L+++N+++F   ++++  A   + L+++     +V +KH C+L  L +QQE+GL 
Sbjct  336  KLLTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLA  395

Query  544  SVLPLGNCTLKIRRTLTTESTAVLMPFSGKEI-NHKNGKYYGLNALSNNMILFDRLQLKN  602
            S LPLG   +KI+R+LTT S AV++PF  +E+ +   + YYG+NA S NMI++DR Q + 
Sbjct  396  SSLPLGVNQIKIQRSLTTSSVAVFVPFVTQELFQGGAAMYYGINAKSRNMIMLDRKQARC  455

Query  603  PNGFILGSPGSGKSFSAKREMLNVFLATdddiiiidPEREYTNLVAALNGETIFVSPASN  662
            PN++ LG+PGSGKS S K E+++VFL+T DDI+I DPE EY  LV  L+G+ I +SP+S+
Sbjct  456  PNALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSK  515

Query  663  NFINPLDMSKDYSDDESPLVMKSDFILSFCE-CLVGKQGLTAKEKAIIDRCLTMTYGEYL  721
            +F+NPLD++ +YS+D++PL +KSDF+LSFCE  + GK+GL A EK++IDR + + Y  YL
Sbjct  516  DFVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYL  575

Query  722  IKFDPDKIPTLMEFYENLKAQPEKEAKGLALSFELYIKGNLNVFAHKTNVDVKNRVVSYD  781
                P+++P L ++   L  Q   EA  +A +++LY+ G+LNVF H+TNVD+ NR+VS+D
Sbjct  576  ADPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFD  635

Query  782  IKDLGKQLKTLGMLIVLDYVWNRITVNRAQGKRTWIYMDEIYLLFANEYSANFLYELYKR  841
            IK+LGKQLK LGMLIV D +W R+T NR+QGK TW + DE+ LL+ +E +A +  E+ KR
Sbjct  636  IKELGKQLKKLGMLIVQDQIWGRVTANRSQGKATWYFADEFHLLLKEEQTAAYSAEIWKR  695

Query  842  ARKWGGVPTGITQNVEDLLKSETARSMLSNTDFVMMLNQATSDRVQLAKILNISDNLLSY  901
             RKWGG+PTG TQNV DLL S    ++L N+DF+ +LNQA++DR  LA  LN+S +   Y
Sbjct  696  FRKWGGIPTGATQNVKDLLSSPEIENILENSDFITLLNQASGDRKILAERLNLSTEQQKY  755

Query  902  VTNSDSGQGLICCGGSIIPFRDKFPKN-NLYRLMTSSFNEVSE  943
            + NS++G+GL+     ++PF + +P N +LY++MT+ +NEV+ 
Sbjct  756  IDNSEPGEGLLIFENVVLPFTNPIPHNTQLYKIMTTRLNEVAG  798

50) MGAS10750_Spy1690 in NC_008024


> NC_021994_R1|34|G34|529233428|YP_008394240.1|Enterococcus_faecium_Aus0085|+|28234..30633|-|EFAU085_00716|Type 
IV secretory 
pathway, VirB4 component
Length=799

 Score =  498 bits (1878),  Expect = 5e-142, Method: Compositional matrix adjust.
 Identities = 308/609 (51%), Positives = 458/609 (76%), Gaps = 4/609 (0%)

Query  51   TVEDTIPYIRMLPEGICQLDEKNYSKTISFQDINYQLALEEDRDLIFNQFANFLNSFDPS  110
            T +++IPY  M P+G+C++    +SK I F DI+YQLA  + +  IF+++ ++ N  D+S
Sbjct  38   TAQQSIPYEVMYPDGVCRVSPGVFSKCIEFADISYQLAQPDTQTAIFEKLCDLYNYVDAS  97

Query  111  VHIELSYVNQLGRNKDLQDAIKIADKGDFYDDVRKEFREMLKLQLAKGNNGLKKMKYITF  170
            +HI++S++N+     +   ++ IA +GD +DD+R E+  +L+ QLA+GNNG+ K KY+TF
Sbjct  98   IHIQFSFLNRKVDPVQYAKSFEIAPQGDDFDDIRAEYTGILQKQLANGNNGMVKTKYLTF  157

Query  171  TTEADNLEQARAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNPDKN-FDFSYK  229
            T EA+++  ARA+L+R+  D+L+ FKSMG  A+ +DG ERL L+H++ +PD + F+F  K
Sbjct  158  TIEAESVKAARARLKRIGFDLLGYFKSMGAVAHVMDGWERLNLLHGVYHPDGEIFNFDWK  217

Query  230  DLKKKE-STKSHITpnifnfapannfkfgkfIGAVSHFQILASELSDRMLSEFLDIDDNI  288
             L     STK  I+P+ + F+ A+ F  G   GAVS +QIL++ELSD ML++FL+ +  +
Sbjct  218  WLAPSGLSTKDFIAPSSLCFGNAKTFGMGGKYGAVSFLQILSPELSDDMLADFLNTESGV  277

Query  289  YVAFHIDVVEQAEAIKLIKRKNTDLDRMKIEEQKKAVRAGYDMDIIPSDINTFGADVKSM  348
             V +H++ +EQ+ AIK IKRK TDLD MKI EQKKAVR+GYDMDI+PSD+ T+G D K +
Sbjct  278  LVNLHVQAIEQTKAIKTIKRKITDLDAMKIAEQKKAVRSGYDMDILPSDLATYGEDAKKL  337

Query  349  LSDLQNRDERLFVVSIVMMNFARTNQKLENTIAQISSIANRHNCQVKRLSHQQEQGLVSV  408
            L+ LQ R+ERLF ++++++N A T+QKL+N + Q +++A++HNC + RL  QQEQGL S 
Sbjct  338  LTKLQTRNERLFQLTFLVLNVADTKQKLNNDVFQAAGVAQKHNCPLVRLDYQQEQGLASS  397

Query  409  LPLGVNQVEIKRFLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMADRKKLKNP  468
            LPLGVNQ+ I+R LT+SS AVF+PF T+ELF +++ ++YYG+NA S+N+IM DRK+ + P
Sbjct  398  LPLGVNQIKIQRSLTTSSVAVFVPFVTQELF-QGGAAMYYGINAKSRNMIMLDRKQARCP  456

Query  469  NGLILGTPGSGKSFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSKD  528
            N+L LGTPGSGKS S K E+ + +L T DD++I DPE+EY  LVK+++G+VI++S+ SKD
Sbjct  457  NALKLGTPGSGKSMSCKSEIVSVFLTTPDDIFISDPEAEYYPLVKRLHGQVIRLSPTSKD  516

Query  529  YLNPLDINMNYGDGDAPLKDKANFIMSMLELVVGG-SGLTAAEKSVIDRCLPKIYQKYFE  587
            ++NPLDIN+NY+++D PL  K++F++S  ELV+GG +GL A EK+VIDR +  IY+ Y+ 
Sbjct  517  FVNPLDINLNYSEDDNPLALKSDFVLSFCELVMGGKNGLEAIEKTVIDRAVRVIYRPYLA  576

Query  588  DPKPENMPILGDLYDMLLSQEEGVGRKLATEMEIYVKGSLNVFNNRSNVDLNRQLLCFDI  647
            DP+PENMPIL+DL   LL Q+   + ++A  +++YV GSLNVFN+R+NVD+  +L+ FDI
Sbjct  577  DPRPENMPILSDLHKALLDQHVPEADRVAQALDLYVSGSLNVFNHRTNVDIGNRLVSFDI  636

Query  648  KELGTQLKK  656
            KELG QLKK
Sbjct  637  KELGKQLKK  645