Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
DNA_binding protein |
NC_018594 (Streptococcus pneumoniae A45) |
2e-27 |
98 |
|
DNA_binding protein |
NC_011900 (Streptococcus pneumoniae ATCC 700669) |
4e-21 |
100 |
|
hypothetical protein |
NC_008533 (Streptococcus pneumoniae D39) |
4e-21 |
100 |
|
putative DNA_binding protein |
NC_017591 (Streptococcus pneumoniae INV104) |
4e-21 |
100 |
|
hypothetical protein |
NC_012466 (Streptococcus pneumoniae JJA) |
4e-21 |
100 |
|
hypothetical protein |
NC_003098 (Streptococcus pneumoniae R6) |
4e-21 |
100 |
|
putative transcriptional regulator |
NC_014494 (Streptococcus pneumoniae AP200) |
1e-20 |
95 |
|
hypothetical protein |
NC_011072 (Streptococcus pneumoniae G54) |
1e-20 |
95 |
|
hypothetical protein |
NC_018630 (Streptococcus pneumoniae gamPNI0373) |
1e-20 |
95 |
|
hypothetical protein |
NC_012467 (Streptococcus pneumoniae P1031) |
1e-20 |
95 |
|
hypothetical protein |
NC_017905 (Streptococcus parasanguinis FW213) |
2e-20 |
95 |
|
hypothetical protein |
NC_004368 (Streptococcus agalactiae NEM316) |
4e-20 |
66 |
|
hypothetical protein |
NC_016749 (Streptococcus macedonicus ACA-DC 198) |
6e-20 |
70 |
|
Cro/CI family transcriptional regulator |
NC_017620 (Streptococcus suis D9) |
1e-19 |
73 |
|
XRE family transcriptional regulator |
NC_017619 (Streptococcus suis SS12) |
1e-19 |
70 |
|
DNA-binding protein |
NC_012926 (Streptococcus suis BM407) |
2e-19 |
70 |
|
hypothetical protein |
NC_016749 (Streptococcus macedonicus ACA-DC 198) |
2e-19 |
69 |
|
Cro/CI family transcriptional regulator |
NC_004116 (Streptococcus agalactiae 2603V/R) |
1e-18 |
70 |
|
Cro/CI family transcriptional regulator |
NC_017567 (Streptococcus dysgalactiae ATCC 12394) |
1e-18 |
70 |
|
hypothetical protein |
NC_021006 (Streptococcus pneumoniae SNP034156) |
5e-18 |
70 |
|
hypothetical protein |
NC_021028 (Streptococcus pneumoniae SNP034183) |
5e-18 |
70 |
|
hypothetical protein |
NC_021026 (Streptococcus pneumoniae SNP994038) |
5e-18 |
70 |
|
hypothetical protein |
NC_021005 (Streptococcus pneumoniae SNP994039) |
5e-18 |
70 |
|
phage associated transcriptional regulator |
NC_017581 (Streptococcus thermophilus JIM 8232) |
3e-17 |
66 |
|
Transcriptional regulator, Cro/CI family |
NC_021486 (Streptococcus agalactiae ILRI005) |
9e-17 |
60 |
|
DNA_binding protein |
NC_012004 (Streptococcus uberis 0140J) |
3e-16 |
59 |
|
Cro/CI family transcriptional regulator |
NC_008024 (Streptococcus pyogenes MGAS10750) |
2e-15 |
63 |
|
Cro/CI family transcriptional regulator |
NC_008023 (Streptococcus pyogenes MGAS2096) |
2e-15 |
63 |
|
phage associated transcriptional regulator |
NC_007296 (Streptococcus pyogenes MGAS6180) |
2e-15 |
63 |
|
Cro/CI family transcriptional regulator |
NC_008021 (Streptococcus pyogenes MGAS9429) |
2e-15 |
63 |
|
helix-turn-helix family protein |
NC_018936 (Streptococcus pyogenes A20) |
6e-15 |
58 |
|
Cro/CI family transcriptional regulator |
NC_007297 (Streptococcus pyogenes MGAS5005) |
6e-15 |
58 |
|
repressor protein |
NC_002737 (Streptococcus pyogenes SF370) |
6e-15 |
58 |
|
transcriptional regulator, XRE family |
NC_021011 (Eubacterium siraeum 70/3) |
7e-13 |
44 |
|
putative transcriptional regulator, Cro/CI family |
NC_022238 (Streptococcus constellatus C1050) |
8e-13 |
54 |
|
hypothetical protein |
NC_020995 (Enterococcus casseliflavus EC20) |
1e-12 |
49 |
|
hypothetical protein |
NC_020995 (Enterococcus casseliflavus EC20) |
3e-12 |
49 |
|
transcriptional regulator, HTH-type |
NC_018664 (Clostridium acidurici 9a) |
3e-12 |
50 |
|
Cro/CI family transcriptional regulator |
NC_009442 (Streptococcus suis 05ZYH33) |
4e-12 |
53 |
|
Cro/CI family transcriptional regulator |
NC_009443 (Streptococcus suis 98HAH33) |
4e-12 |
53 |
|
Cro/CI family transcriptional regulator |
NC_012926 (Streptococcus suis BM407) |
4e-12 |
53 |
|
Cro/CI family transcriptional regulator |
NC_012924 (Streptococcus suis SC84) |
4e-12 |
53 |
|
putative Xre family DNA-binding protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
6e-12 |
44 |
|
transcriptional regulator, HTH-type |
NC_018664 (Clostridium acidurici 9a) |
7e-12 |
47 |
|
transcriptional regulator, XRE family |
NC_021022 ([Ruminococcus] obeum A2-162) |
8e-12 |
47 |
|
transcriptional regulator |
NC_018017 (Desulfitobacterium dehalogenans ATCC 51507) |
9e-12 |
55 |
|
transcriptional regulator |
NC_019903 (Desulfitobacterium dichloroeliminans LMG P-21439) |
2e-11 |
44 |
|
putative transcriptional regulator |
NC_018068 (Desulfosporosinus acidiphilus SJ4) |
2e-11 |
44 |
|
XRE family transcriptional regulator |
NC_011830 (Desulfitobacterium hafniense DCB-2) |
3e-11 |
53 |
|
hypothetical protein |
NC_007907 (Desulfitobacterium hafniense Y51) |
3e-11 |
53 |
|
hypothetical protein |
NC_012468 (Streptococcus pneumoniae 70585) |
3e-11 |
47 |
|
hypothetical protein |
NC_010582 (Streptococcus pneumoniae CGSP14) |
3e-11 |
47 |
|
transcriptional regulator, XRE family |
NC_021042 (Faecalibacterium prausnitzii L2/6) |
4e-11 |
48 |
|
transcriptional regulator |
NC_016584 (Desulfosporosinus orientis DSM 765) |
8e-11 |
47 |
|
helix-turn-helix domain-containing protein |
NC_014828 (Ethanoligenens harbinense YUAN-3) |
1e-10 |
46 |
|
hypothetical protein |
NC_012781 (Eubacterium rectale ATCC 33656) |
2e-10 |
42 |
|
transcriptional regulator, XRE family |
NC_018867 (Dehalobacter sp. CF) |
2e-10 |
47 |
|
transcriptional regulator, XRE family |
NC_018866 (Dehalobacter sp. DCA) |
2e-10 |
47 |
|
XRE family transcriptional regulator |
NC_016641 (Paenibacillus terrae HPL-003) |
2e-10 |
42 |
|
transcriptional regulator |
NC_018515 (Desulfosporosinus meridiei DSM 13257) |
3e-10 |
44 |
|
Helix-turn-helix. |
NC_021013 (Ruminococcus bromii L2-63) |
4e-10 |
44 |
|
Helix-turn-helix. |
NC_021015 ([Ruminococcus] torques L2-14) |
5e-10 |
43 |
|
Helix-turn-helix. |
NC_021019 (Eubacterium cylindroides T2-87) |
6e-10 |
47 |
|
transcriptional repressor, putative |
NC_018584 (Listeria monocytogenes ATCC 19117) |
6e-10 |
44 |
|
Cro/Cl family transcriptional regulator |
NC_021830 (Listeria monocytogenes J1-220) |
7e-10 |
44 |
|
transcriptional repressor |
NC_008555 (Listeria welshimeri SLCC5334) |
7e-10 |
44 |
|
putative Xre family DNA-binding protein |
NC_016052 (Tetragenococcus halophilus NBRC 12172) |
7e-10 |
42 |
|
putative transcriptional regulator |
NC_018068 (Desulfosporosinus acidiphilus SJ4) |
2e-09 |
47 |
|
hypothetical protein |
NC_014498 (Streptococcus pneumoniae 670-6B) |
3e-09 |
54 |
|
helix-turn-helix domain-containing protein |
NC_014828 (Ethanoligenens harbinense YUAN-3) |
3e-09 |
55 |
|
transcriptional regulator, XRE family |
NC_021013 (Ruminococcus bromii L2-63) |
3e-09 |
52 |
|
putative transcriptional regulator |
NC_022237 (Streptococcus intermedius C270) |
4e-09 |
54 |
|
putative Xre family DNA-binding protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
4e-09 |
43 |
|
putative Xre family DNA-binding protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
5e-09 |
45 |
|
hypothetical protein |
NC_012467 (Streptococcus pneumoniae P1031) |
8e-09 |
52 |
|
putative Xre family DNA-binding protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
8e-09 |
47 |
|
putative Xre family DNA-binding protein |
NC_016048 (Oscillibacter valericigenes Sjm18-20) |
6e-08 |
47 |
|
hypothetical protein |
NC_017195 (Bacillus subtilis RO-NN-1) |
8e-08 |
45 |
|
DNA-binding protein |
NC_017297 (Clostridium botulinum 230613) |
1e-07 |
53 |
|
DNA-binding protein |
NC_009699 (Clostridium botulinum Langeland) |
1e-07 |
53 |
|
transcriptional regulator, XRE family |
NC_021031 (Butyrivibrio fibrisolvens 16/4) |
5e-07 |
47 |
|
transcriptional regulator, XRE family |
NC_021020 (Faecalibacterium prausnitzii SL3/3) |
3e-06 |
49 |
|
XRE family transcriptional regulator |
NC_017167 (Alicyclobacillus acidocaldarius Tc-4-1) |
1e-04 |
42 |
|
Predicted transcriptional regulators |
NC_021020 (Faecalibacterium prausnitzii SL3/3) |
1e-04 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_011900_P1' AND ph.id_pai_orf='34' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc