Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of HPP12_0472 gene of NC_011498_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPP12_0472
( YP_002301106.1 )

hypothetical protein

NC_011498
(Helicobacter pylori P12)

3e-41

100

2) HPB8_483
( YP_003728504.1 )

hypothetical protein

NC_014256
(Helicobacter pylori B8)

7e-39

3) HPSA_07545
( YP_005772063.1 )

hypothetical protein

NC_017361
(Helicobacter pylori SouthAfrica7)

1e-38

4) C694_02260
( YP_006934367.1 )

hypothetical protein

NC_018939
(Helicobacter pylori 26695)

2e-38

5) C695_02260
( YP_006892932.1 )

hypothetical protein

NC_018937
(Helicobacter pylori Rif1)

2e-38

6) C730_02260
( YP_006935973.1 )

hypothetical protein

NC_018938
(Helicobacter pylori Rif2)

2e-38

7) HPF57_0103
( YP_005776817.1 )

hypothetical protein

NC_017367
(Helicobacter pylori F57)

4e-37

8) HPPC_07675
( YP_003927789.1 )

hypothetical protein

NC_014555
(Helicobacter pylori PeCan4)

1e-36

9) HPF30_1210
( YP_005774955.1 )

hypothetical protein

NC_017365
(Helicobacter pylori F30)

1e-36

10) HMPREF4655_20319
( YP_005769460.1 )

PZ2b protein

NC_017360
(Helicobacter pylori 35A)

8e-37

11) MWE_0132
( YP_006337797.1 )

hypothetical protein

NC_017926
(Helicobacter pylori XZ274)

6e-36

12) K747_09060
( YP_007978726.1 )

hypothetical protein

NC_021215
(Helicobacter pylori UM032)

3e-30

13) K748_03715
( YP_008336645.1 )

hypothetical protein

NC_021882
(Helicobacter pylori UM298)

3e-30

14) K749_05305
( YP_007980833.1 )

hypothetical protein

NC_021216
(Helicobacter pylori UM299)

3e-30

15) HPLT_08319
( YP_005773731.1 )

hypothetical protein

NC_017363
(Helicobacter pylori Lithuania75)

3e-30

• Sequence Alignments

1) HPP12_0472 in NC_011498


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97
           IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

2) HPB8_483 in NC_014256


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  153 bits (564),  Expect = 7e-39, Method: Compositional matrix adjust.
 Identities = 91/97 (94%), Positives = 95/97 (98%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTNKEYKNLLVKDMPKSVYREIEIAMGLLFEINEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPT+KEYKNLLVKD+PK V REIEIAMGLLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFLTQAMDRVLYDARARHYEMRLAKEIKKSRFG  97
           IEVMKFLTQAMDRVLYDARA+HYEMRLAKEIKK+RFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

3) HPSA_07545 in NC_017361


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  152 bits (561),  Expect = 1e-38, Method: Compositional matrix adjust.
 Identities = 87/97 (90%), Positives = 94/97 (97%), Gaps = 0/97 (0%)

Query  1   MQFPLKKELKISQKYVIPKGFDPTNKEYKNLLVKDLPKTVHREVEIAMRLLFEINEIETA  60
           MQFPLKK+LKISQKYVIPKGFDPT+KEYKNLLVKDLPK VHRE+EIAM LLFEINE+ETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFLTQAMDRVLYDVRTKHYEMRLAKNIKKSRFG  97
           IEVMKFLTQAMDRVLYD R+KHYEMRLAK+IKK+RFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

4) C694_02260 in NC_018939


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 90/97 (93%), Positives = 94/97 (97%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLRISQKYVIPKGFDPTNKEYKNFLVKDLPKLVHREVEIVMKLLFEINEVETA  60
           MQFPLKKDL+ISQKYVIPKGFDPT+KEYKN+LVKDLPKLVHRE+EI M LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFLTQAMDRVLYDARAIHYEMRLAKEIKKNRFG  97
           IEVMKFLTQAMDRVLYDARA HYEMRLAKEIKKNRFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

5) C695_02260 in NC_018937


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 90/97 (93%), Positives = 94/97 (97%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLRISQKYVIPKGFDPTNKEYKNFLVKDLPKLVHREVEIVMKLLFEINEVETA  60
           MQFPLKKDL+ISQKYVIPKGFDPT+KEYKN+LVKDLPKLVHRE+EI M LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFLTQAMDRVLYDARAIHYEMRLAKEIKKNRFG  97
           IEVMKFLTQAMDRVLYDARA HYEMRLAKEIKKNRFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

6) C730_02260 in NC_018938


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  152 bits (559),  Expect = 2e-38, Method: Compositional matrix adjust.
 Identities = 90/97 (93%), Positives = 94/97 (97%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLRISQKYVIPKGFDPTNKEYKNFLVKDLPKLVHREVEIVMKLLFEINEVETA  60
           MQFPLKKDL+ISQKYVIPKGFDPT+KEYKN+LVKDLPKLVHRE+EI M LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFLTQAMDRVLYDARAIHYEMRLAKEIKKNRFG  97
           IEVMKFLTQAMDRVLYDARA HYEMRLAKEIKKNRFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

7) HPF57_0103 in NC_017367


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  147 bits (543),  Expect = 4e-37, Method: Compositional matrix adjust.
 Identities = 87/97 (90%), Positives = 92/97 (95%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTNKEYKNLLVKDLPKSVYREVEIAMELLFEINEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPT+KEYKNLLVKDLPK V RE+EIAM LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFFTQAMDRILYDVRAKHYEMRLAKKIKKSRFG  97
           IEVMKF+TQAMDR+LYD RAKHYEMRLAK IKK+RFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

8) HPPC_07675 in NC_014555


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 87/97 (90%), Positives = 92/97 (95%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTNKEYINLLVKDLPKSVYKEIEIAMGLLFEISEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPT+KEY NLLVKDLPK V +EIEIAMGLLFEI+EVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFLTQAMDRVLYDARTKHYKMRLAKEIKKSGFG  97
           IEVMKFLTQAMDRVLYDAR+KHY MRLAKEIKK+ FG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

9) HPF30_1210 in NC_017365


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  146 bits (537),  Expect = 1e-36, Method: Compositional matrix adjust.
 Identities = 86/97 (89%), Positives = 93/97 (96%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTNKEYKNLLVKDLPKSVYREVEIAMELLFEINEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPT+KEYKNLLVKDLPK V RE+EIAM LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFFTQAIDRILYDARAKHYEMRLAQKIKKSRFG  97
           IEVMKF+TQA+DR+LYDARAKHYEMRLA+ IKK+RFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

10) HMPREF4655_20319 in NC_017360


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  146 bits (539),  Expect = 8e-37, Method: Compositional matrix adjust.
 Identities = 86/97 (89%), Positives = 92/97 (95%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTNKEYKNLLVKDLPKSVYREVEIAMELLFEINEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPT+KEYKNLLVKDLPK V RE+EIAM LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFFTQAMDRILYDVRAKHYEMRLAQKIKKSRFG  97
           IEVMKF+TQAMDR+LYD RAKHYEMRLA+ IKK+RFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

11) MWE_0132 in NC_017926


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  144 bits (528),  Expect = 6e-36, Method: Compositional matrix adjust.
 Identities = 85/97 (88%), Positives = 91/97 (94%), Gaps = 0/97 (0%)

Query  1   MQFPLKKDLKISQKYVISKGFDPTNKEYKNLLVKDLPKSVYREVEIAMELLFEINEVETA  60
           MQFPLKKDLKISQKYVI+KGFDPT+KEYKNLLVKDLPK V RE+EIAM LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFFTQAMDCILYDVRAKHYEMRLAKKIKKSRFG  97
           IEVMKF+TQAMD +LYD RAKHYEMRLAK IKK+RFG
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNRFG  97

12) K747_09060 in NC_021215


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 73/82 (90%), Positives = 78/82 (96%), Gaps = 0/82 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTNKEYKNLLVKDLPKSVYREVEIAMELLFEINEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPT+KEYKNLLVKDLPK V RE+EIAM LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFFTQAMERILYDVRAKH  82
           IEVMKF+TQAM+R+LYD RAKH
Sbjct  61  IEVMKFLTQAMDRVLYDARAKH  82

13) K748_03715 in NC_021882


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 73/82 (90%), Positives = 78/82 (96%), Gaps = 0/82 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTNKEYKNLLVKDLPKSVYREVEIAMELLFEINEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPT+KEYKNLLVKDLPK V RE+EIAM LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFFTQAMERILYDVRAKH  82
           IEVMKF+TQAM+R+LYD RAKH
Sbjct  61  IEVMKFLTQAMDRVLYDARAKH  82

14) K749_05305 in NC_021216


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 73/82 (90%), Positives = 78/82 (96%), Gaps = 0/82 (0%)

Query  1   MQFPLKKDLKISQKYVIPKGFDPTNKEYKNLLVKDLPKSVYREVEIAMELLFEINEVETA  60
           MQFPLKKDLKISQKYVIPKGFDPT+KEYKNLLVKDLPK V RE+EIAM LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFFTQAMERILYDVRAKH  82
           IEVMKF+TQAM+R+LYD RAKH
Sbjct  61  IEVMKFLTQAMDRVLYDARAKH  82

15) HPLT_08319 in NC_017363


> NC_011498_P1|34|G34|210134667|YP_002301106.1|Helicobacter_pylori_P12|-|39196..39489|-|HPP12_0472|hypothetical 
protein
Length=97

 Score =  125 bits (456),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 83/95 (88%), Positives = 91/95 (96%), Gaps = 0/95 (0%)

Query  1   MQFPLKKDLRISQKYVIPKGFDPTNKEYkkllvkdlsksvHREVEIAMELLFEINEVETA  60
           MQFPLKKDL+ISQKYVIPKGFDPT+KEYK+LLVKDL+K VHRE+EIAM LLFEINEVETA
Sbjct  1   MQFPLKKDLKISQKYVIPKGFDPTKKEYKNLLVKDLPKLVHREIEIAMGLLFEINEVETA  60

Query  61  IEVMKFLTQVMDRVLHDTRARHYEMRLAKEIKKKR  95
           IEVMKFLTQ MDRVL D+RA+HYEMRLAKEIKK+R
Sbjct  61  IEVMKFLTQAMDRVLYDARAKHYEMRLAKEIKKNR  95