Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
TraG/TraD family protein |
NC_009656 (Pseudomonas aeruginosa PA7) |
0.0 |
100 |
|
hypothetical protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
0.0 |
99 |
|
TraG/TraD family protein |
NC_018080 (Pseudomonas aeruginosa DK2) |
0.0 |
99 |
|
TraG/TraD family protein |
NC_020912 (Pseudomonas aeruginosa B136-33) |
0.0 |
99 |
|
conjugal transfer protein TraG |
NC_021577 (Pseudomonas aeruginosa RP73) |
0.0 |
99 |
|
hypothetical protein |
NC_008463 (Pseudomonas aeruginosa UCBPP-PA14) |
0.0 |
99 |
|
conjugative coupling factor TraD |
NC_004129 (Pseudomonas protegens Pf-5) |
0.0 |
80 |
|
hypothetical protein |
NC_007005 (Pseudomonas syringae B728a) |
0.0 |
74 |
|
hypothetical protein |
NC_015740 (Pseudomonas stutzeri ATCC 17588) |
0.0 |
70 |
|
hypothetical protein |
NC_012912 (Dickeya zeae Ech1591) |
0.0 |
67 |
|
conjugative coupling factor TraD |
NC_015422 (Alicycliphilus denitrificans K601) |
0.0 |
70 |
|
hypothetical protein |
NC_008825 (Methylibium petroleiphilum PM1) |
0.0 |
70 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
0.0 |
70 |
|
membrane protein |
NC_018828 (Bordetella parapertussis Bpp5) |
0.0 |
70 |
|
hypothetical protein |
NC_009138 (Herminiimonas arsenicoxydans ) |
0.0 |
70 |
|
Conjugative coupling factor TraD |
NC_017845 (Pectobacterium sp. SCC3193) |
0.0 |
69 |
|
hypothetical protein |
NC_009719 (Parvibaculum lavamentivorans DS-1) |
0.0 |
70 |
|
hypothetical protein |
NC_011662 (Thauera sp. MZ1T) |
0.0 |
70 |
|
hypothetical protein |
NC_008782 (Acidovorax sp. JS42) |
0.0 |
70 |
|
conjugative coupling factor TraD |
NC_018028 (Pseudomonas stutzeri CCUG 29243) |
0.0 |
70 |
|
hypothetical protein |
NC_008344 (Nitrosomonas eutropha C91) |
0.0 |
71 |
|
hypothetical protein |
NC_010688 (Xanthomonas campestris B100) |
0.0 |
69 |
|
Hypothetical Protein |
NC_020815 (Xanthomonas citri Aw12879) |
0.0 |
69 |
|
hypothetical protein |
NC_013421 (Pectobacterium wasabiae WPP163) |
0.0 |
69 |
|
hypothetical protein |
NC_016147 (Pseudoxanthomonas spadix BD-a59) |
0.0 |
68 |
|
VirD4, type IV secretory pathway, VirD4 components |
NC_007973 (Cupriavidus metallidurans CH34) |
0.0 |
70 |
|
hypothetical protein |
NC_011770 (Pseudomonas aeruginosa LESB58) |
0.0 |
70 |
|
hypothetical protein |
NC_012691 (Tolumonas auensis DSM 9187) |
0.0 |
69 |
|
VirD4, Type IV secretory pathway, VirD4 components |
NC_007086 (Xanthomonas campestris 8004) |
0.0 |
69 |
|
hypothetical protein |
NC_014910 (Alicycliphilus denitrificans BC) |
0.0 |
70 |
|
plasmid-transfer-protein |
NC_010170 (Bordetella petrii DSM 12804) |
0.0 |
70 |
|
hypothetical protein |
NC_014640 (Achromobacter xylosoxidans A8) |
0.0 |
70 |
|
hypothetical protein |
NC_007508 (Xanthomonas campestris 85-10) |
0.0 |
70 |
|
Type IV secretory pathway, VirD4 components |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
0.0 |
69 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
0.0 |
70 |
|
hypothetical protein |
NC_010002 (Delftia acidovorans SPH-1) |
0.0 |
70 |
|
hypothetical protein |
NC_017532 (Pseudomonas stutzeri DSM 4166) |
0.0 |
70 |
|
hypothetical protein |
NC_011901 (Thioalkalivibrio sulfidophilus HL-EbGR7) |
0.0 |
70 |
|
hypothetical protein |
NC_015379 (Pseudomonas brassicacearum NFM421) |
0.0 |
68 |
|
Type IV secretory pathway, VirD4 components |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
0.0 |
71 |
|
hypothetical protein |
NC_008782 (Acidovorax sp. JS42) |
0.0 |
71 |
|
hypothetical protein |
NC_008782 (Acidovorax sp. JS42) |
0.0 |
70 |
|
conjugal transfer protein TraG |
NC_021491 (Pseudomonas putida H8234) |
0.0 |
67 |
|
hypothetical protein |
NC_010501 (Pseudomonas putida W619) |
0.0 |
67 |
|
hypothetical protein |
NC_017986 (Pseudomonas putida ND6) |
0.0 |
66 |
|
hypothetical protein |
NC_018220 (Pseudomonas putida DOT-T1E) |
0.0 |
66 |
|
hypothetical protein |
NC_009512 (Pseudomonas putida F1) |
0.0 |
66 |
|
hypothetical protein |
NC_015733 (Pseudomonas putida S16) |
0.0 |
67 |
|
conjugative coupling factor TraD |
NC_015422 (Alicycliphilus denitrificans K601) |
0.0 |
71 |
|
hypothetical protein |
NC_020800 (Xanthomonas axonopodis Xac29-1) |
0.0 |
69 |
|
conjugal transfer protein TraG |
NC_021491 (Pseudomonas putida H8234) |
0.0 |
66 |
|
hypothetical protein |
NC_017549 (Pseudomonas aeruginosa NCGM2.S1) |
0.0 |
70 |
|
protein VirD4 |
NC_016830 (Pseudomonas fluorescens F113) |
0.0 |
66 |
|
hypothetical protein |
NC_008752 (Acidovorax citrulli AAC00-1) |
0.0 |
71 |
|
putative traG-like protein |
NC_012660 (Pseudomonas fluorescens SBW25) |
0.0 |
66 |
|
Type IV secretory pathway, VirD4 components |
NC_021285 (Achromobacter xylosoxidans NH44784-1996) |
0.0 |
71 |
|
hypothetical protein |
NC_018080 (Pseudomonas aeruginosa DK2) |
0.0 |
71 |
|
type IV secretory pathway, VirD4 components |
NC_017671 (Stenotrophomonas maltophilia D457) |
0.0 |
71 |
|
hypothetical protein |
NC_017958 (Tistrella mobilis KA081020-065) |
0.0 |
71 |
|
hypothetical protein |
NC_007492 (Pseudomonas fluorescens Pf0-1) |
0.0 |
67 |
|
hypothetical protein |
NC_006513 (Aromatoleum aromaticum EbN1) |
0.0 |
70 |
|
type IV secretion-system coupling protein DNA-binding domain-containing protein |
NC_015460 (Gallibacterium anatis UMN179) |
0.0 |
59 |
|
conjugal transfer protein TraG |
NC_021743 (Mannheimia haemolytica D153) |
0.0 |
56 |
|
VirD4, Type IV secretory pathway, VirD4 component |
NC_020833 (Mannheimia haemolytica USDA-ARS-USMARC-183) |
0.0 |
56 |
|
VirD4, Type IV secretory pathway, VirD4 component |
NC_020834 (Mannheimia haemolytica USDA-ARS-USMARC-185) |
0.0 |
56 |
|
conjugal transfer protein TraG |
NC_021883 (Mannheimia haemolytica USMARC_2286) |
0.0 |
56 |
|
hypothetical protein |
NC_010170 (Bordetella petrii DSM 12804) |
0.0 |
73 |
|
hypothetical protein |
NC_016809 (Haemophilus influenzae 10810) |
0.0 |
55 |
|
hypothetical protein |
NC_007146 (Haemophilus influenzae 86-028NP) |
0.0 |
55 |
|
conserved hypothetical protein p35 |
NC_017451 (Haemophilus influenzae R2866) |
0.0 |
55 |
|
hypothetical protein |
NC_010519 (Haemophilus somnus 2336) |
0.0 |
55 |
|
hypothetical protein |
NC_015964 (Haemophilus parainfluenzae T3T1) |
0.0 |
55 |
|
conjugative coupling factor TraD, SXT/TOL subfamily |
NC_021082 (Mannheimia haemolytica M42548) |
0.0 |
55 |
|
conjugal transfer protein TraD |
NC_016808 (Pasteurella multocida 36950) |
0.0 |
55 |
|
hypothetical protein |
NC_011993 (Escherichia coli LF82) |
0.0 |
60 |
|
TraG-family protein |
NC_017634 (Escherichia coli NRG 857C) |
0.0 |
60 |
|
putative plasmid transfer protein |
NC_011745 (Escherichia coli ED1a) |
0.0 |
60 |
|
TraG-family protein |
NC_014121 (Enterobacter cloacae ATCC 13047) |
0.0 |
58 |
|
hypothetical protein |
NC_003919 (Xanthomonas axonopodis 306) |
0.0 |
72 |
|
putative plasmid transfer protein |
NC_009832 (Serratia proteamaculans 568) |
0.0 |
59 |
|
plasmid transfer protein |
NC_014304 (Erwinia billingiae Eb661) |
0.0 |
60 |
|
hypothetical protein |
NC_010102 (Salmonella enterica SGSC4150; SPB7) |
0.0 |
57 |
|
conjugal transfer protein TraG |
NC_021818 (Salmonella enterica CFSAN002050) |
0.0 |
61 |
|
conjugative coupling factor TraD |
NC_015567 (Serratia plymuthica AS9) |
0.0 |
59 |
|
conjugal transfer protein TraD |
NC_015566 (Serratia sp. AS12) |
0.0 |
59 |
|
conjugal transfer protein TraD |
NC_017573 (Serratia sp. AS13) |
0.0 |
59 |
|
plasmid transfer protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
0.0 |
59 |
|
TraG-family protein |
NC_013421 (Pectobacterium wasabiae WPP163) |
0.0 |
58 |
|
hypothetical protein |
NC_008309 (Haemophilus somnus 129PT) |
0.0 |
54 |
|
putative plasmid transfer protein |
NC_009832 (Serratia proteamaculans 568) |
0.0 |
60 |
|
plasmid transfer protein |
NC_013892 (Xenorhabdus bovienii SS-2004) |
0.0 |
59 |
|
type IV secretory pathway, VirD4 components |
NC_017856 (Methylophaga sp. JAM7) |
0.0 |
54 |
|
hypothetical protein |
NC_007484 (Nitrosococcus oceani ATCC 19707) |
0.0 |
54 |
|
conjugative coupling factor TraD, PFGI-1 class |
NC_022268 (Serratia sp. ATCC 39006) |
0.0 |
57 |
|
putative plasmid transfer protein |
NC_009832 (Serratia proteamaculans 568) |
0.0 |
59 |
|
hypothetical protein |
NC_013892 (Xenorhabdus bovienii SS-2004) |
0.0 |
59 |
|
plasmid transfer protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
0.0 |
59 |
|
hypothetical protein |
NC_003198 (Salmonella enterica CT18) |
0.0 |
58 |
|
VirD4, Type IV secretory pathway, VirD4 component |
NC_016832 (Salmonella enterica P-stx-12) |
0.0 |
58 |
|
hypothetical protein |
NC_012125 (Salmonella enterica RKS4594) |
0.0 |
58 |
|
hypothetical protein |
NC_004631 (Salmonella enterica Ty2) |
0.0 |
58 |
|
hypothetical protein |
NC_017445 (Erwinia sp. Ejp617) |
0.0 |
57 |
|
hypothetical protein |
NC_014532 (Halomonas elongata DSM 2581) |
0.0 |
60 |
|
hypothetical protein |
NC_017641 (Escherichia coli UMNK88) |
1e-180 |
60 |
|
ATPase domain |
NC_016112 (Methylomicrobium alcaliphilum 20Z) |
1e-180 |
54 |
|
hypothetical protein |
NC_021176 (Salmonella enterica Ty21a) |
2e-180 |
58 |
|
TraG-family protein |
NC_008800 (Yersinia enterocolitica 8081) |
2e-180 |
57 |
|
hypothetical protein |
NC_009708 (Yersinia pseudotuberculosis IP 31758) |
3e-180 |
56 |
|
plasmid transfer protein |
NC_010554 (Proteus mirabilis HI4320) |
2e-179 |
58 |
|
TraG-family protein |
NC_016816 (Pantoea ananatis LMG 5342) |
7e-178 |
56 |
|
TraG-family protein |
NC_016845 (Klebsiella pneumoniae HS11286) |
2e-177 |
60 |
|
hypothetical protein |
NC_022082 (Klebsiella pneumoniae JM45) |
2e-177 |
60 |
|
traG-like protein |
NC_018691 (Alcanivorax dieselolei B5) |
1e-176 |
60 |
|
TraG-family plasmid transfer protein |
NC_017554 (Pantoea ananatis PA13) |
1e-176 |
55 |
|
hypothetical protein |
NC_014029 (Yersinia pestis Z176003) |
8e-177 |
59 |
|
hypothetical protein |
NC_010067 (Salmonella enterica RSK2980) |
4e-176 |
56 |
|
hypothetical protein |
NC_012779 (Edwardsiella ictaluri 93-146) |
2e-175 |
61 |
|
conjugative coupling factor TraD |
NC_015572 (Methylomonas methanica MC09) |
5e-175 |
54 |
|
plasmid transfer protein |
NC_014228 (Xenorhabdus nematophila ATCC 19061) |
2e-174 |
59 |
|
Type IV secretory pathway, VirD4 components |
NC_020181 (Enterobacter aerogenes EA1509E) |
1e-168 |
56 |
|
hypothetical protein |
NC_008739 (Marinobacter aquaeolei VT8) |
5e-166 |
51 |
|
Type IV secretory pathway VirD4 component |
NC_021870 (Salmonella bongori N268-08) |
1e-164 |
57 |
|
type IV secretory pathway, VirD4 component |
NC_018522 (Klebsiella pneumoniae 1084) |
7e-164 |
57 |
|
hypothetical protein |
NC_012731 (Klebsiella pneumoniae NTUH-K2044) |
7e-164 |
57 |
|
protein TraD |
NC_011035 (Neisseria gonorrhoeae NCCP11945) |
3e-141 |
50 |
|
conjugative coupling factor TraD, TOL family |
NC_016616 (Dechlorosoma suillum PS) |
1e-138 |
48 |
|
hypothetical protein |
NC_015554 (Alteromonas sp. SN2) |
2e-133 |
46 |
|
hypothetical protein |
NC_006513 (Aromatoleum aromaticum EbN1) |
8e-129 |
44 |
|
conjugal transfer protein TraD |
NC_017580 (Shewanella baltica OS117) |
3e-122 |
47 |
|
hypothetical protein |
NC_014366 (gamma proteobacterium HdN1) |
5e-122 |
44 |
|
hypothetical protein |
NC_014366 (gamma proteobacterium HdN1) |
5e-122 |
44 |
|
hypothetical protein |
NC_008752 (Acidovorax citrulli AAC00-1) |
3e-116 |
43 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='EF611301' AND ph.id_pai_orf='34' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc