Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of spaN gene of NC_003198_P5

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) spaN
( NP_457286.1 )

surface presentation of antigens protein (associated with type III secretion and virulence)

NC_003198
(Salmonella enterica CT18)

3e-135

100

2) STBHUCCB_29380
( YP_005218438.1 )

Surface presentation of antigens protein spaN

NC_016832
(Salmonella enterica P-stx-12)

3e-135

100

3) spaN
( NP_806495.1 )

antigen presentation protein SpaN

NC_004631
(Salmonella enterica Ty2)

3e-135

100

4) TY21A_14115
( YP_007927065.1 )

antigen presentation protein SpaN

NC_021176
(Salmonella enterica Ty21a)

3e-135

100

5) SPAB_03595
( YP_001589769.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

5e-134

6) SSPA2564
( YP_002143409.1 )

antigen presentation protein SpaN

NC_011147
(Salmonella enterica AKU12601)

1e-133

7) spaN
( YP_151919.1 )

antigen presentation protein SpaN

NC_006511
(Salmonella enterica ATCC 9150)

1e-133

8) SNSL254_A3097
( YP_002042133.1 )

antigen presentation protein SpaN

NC_011080
(Salmonella enterica SL254)

1e-133

9) SN31241_39840
( YP_008361899.1 )

Surface presentation of antigens protein spaN

NC_021902
(Salmonella enterica USMARC-S3124.1)

1e-133

10) SBOV29181
( YP_008506740.1 )

antigen presentation protein SpaN

NC_022241
(Salmonella enterica 3114)

3e-133

11) spaN
( YP_008307493.1 )

antigen presentation protein SpaN

NC_021844
(Salmonella enterica CFSAN000189)

3e-133

12) SeAg_B3014
( YP_002147789.1 )

antigen presentation protein SpaN

NC_011149
(Salmonella enterica SL483)

3e-133

13) SEEH1578_23270
( YP_008248700.1 )

antigen presentation protein SpaN

NC_021810
(Salmonella enterica 41578)

5e-133

14) SU5_03373
( YP_006088980.1 )

Type III secretion negative regulator

NC_017623
(Salmonella enterica B182)

5e-133

15) spaN
( YP_008252322.1 )

antigen presentation protein SpaN

NC_021812
(Salmonella enterica CFSAN002069)

5e-133

16) SeHA_C3082
( YP_002046852.1 )

antigen presentation protein SpaN

NC_011083
(Salmonella enterica SL476)

5e-133

17) spaN
( YP_008262023.1 )

antigen presentation protein SpaN

NC_021818
(Salmonella enterica CFSAN002050)

5e-133

18) invJ
( YP_002227636.1 )

surface presentation of antigens protein

NC_011274
(Salmonella enterica 287/91)

6e-133

19) invJ
( YP_008482455.1 )

surface presentation of antigens protein

NC_022221
(Salmonella enterica CDC1983-67)

6e-133

20) invJ
( YP_002244805.1 )

surface presentation of antigens protein

NC_011294
(Salmonella enterica P125109)

6e-133

21) spaN
( YP_002638468.1 )

antigen presentation protein SpaN

NC_012125
(Salmonella enterica RKS4594)

6e-133

22) invJ
( YP_005214000.1 )

surface presentation of antigens protein (associated with type III secretion and virulence)

NC_016831
(Salmonella enterica RKS5078)

6e-133

23) spaN
( YP_008382155.1 )

antigen presentation protein SpaN

NC_021984
(Salmonella enterica S06004)

6e-133

24) invJ
( YP_217811.1 )

surface presentation of antigens; secretory proteins

NC_006905
(Salmonella enterica SC-B67)

6e-133

25) spaN
( YP_008267098.1 )

antigen presentation protein SpaN

NC_021820
(Salmonella enterica 08-1736)

9e-133

26) invJ
( YP_005239001.1 )

needle length control protein

NC_016856
(Salmonella enterica 14028S)

9e-133

27) invJ
( YP_005398255.1 )

surface presentation of antigens protein (associated with type III secretion and virulence)

NC_017046
(Salmonella enterica 798)

9e-133

28) spaN
( YP_008253931.1 )

antigen presentation protein SpaN

NC_021814
(Salmonella enterica CFSAN001921)

9e-133

29) STMMW_28541
( YP_005233881.1 )

surface presentation of antigens protein (associated with type III secretion and virulence)

NC_016854
(Salmonella enterica D23580)

9e-133

30) invJ
( NP_461813.1 )

needle length control protein

NC_003197
(Salmonella enterica LT2)

9e-133

31) invJ
( YP_005182760.1 )

surface presentation of antigens protein (associated with type III secretion and virulence)

NC_016810
(Salmonella enterica SL1344)

9e-133

32) invJ
( YP_005243873.1 )

needle length control protein

NC_016857
(Salmonella enterica ST4/74)

9e-133

33) STMDT12_C29410
( YP_005248637.1 )

needle length control protein

NC_016860
(Salmonella enterica T000240)

9e-133

34) STU288_14615
( YP_007904014.1 )

antigen presentation protein SpaN

NC_021151
(Salmonella enterica U288)

9e-133

35) invJ
( YP_005253381.1 )

needle length control protein

NC_016863
(Salmonella enterica UK-1)

9e-133

36) SeD_A3202
( YP_002216861.1 )

antigen presentation protein SpaN

NC_011205
(Salmonella enterica CT_02021853)

8e-132

37) CFSAN001992_19065
( YP_007473529.1 )

antigen presentation protein SpaN

NC_020307
(Salmonella enterica CFSAN001992)

4e-131

38) SeSA_A3045
( YP_002115844.1 )

antigen presentation protein SpaN

NC_011094
(Salmonella enterica CVM19633)

4e-131

39) SARI_00081
( YP_001569176.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

8e-125

40) spaN
( YP_004731332.1 )

surface presentation of antigens protein (associated with type III secretion and virulence)

NC_015761
(Salmonella bongori NCTC 12419)

2e-112

41) A464_2916
( YP_008323510.1 )

Type III secretion host injection and negativeregulator protein (YopD); Surface presentation of antigens protein SpaN (Invasion protein InvJ)

NC_021870
(Salmonella bongori N268-08)

3e-106

• Sequence Alignments

1) spaN in NC_003198


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  474 bits (1787),  Expect = 3e-135, Method: Compositional matrix adjust.
 Identities = 336/336 (100%), Positives = 336/336 (100%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

2) STBHUCCB_29380 in NC_016832


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  474 bits (1787),  Expect = 3e-135, Method: Compositional matrix adjust.
 Identities = 336/336 (100%), Positives = 336/336 (100%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

3) TY21A_14115 in NC_021176


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  474 bits (1787),  Expect = 3e-135, Method: Compositional matrix adjust.
 Identities = 336/336 (100%), Positives = 336/336 (100%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

4) spaN in NC_004631


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  474 bits (1787),  Expect = 3e-135, Method: Compositional matrix adjust.
 Identities = 336/336 (100%), Positives = 336/336 (100%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

5) SPAB_03595 in NC_010102


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  470 bits (1772),  Expect = 5e-134, Method: Compositional matrix adjust.
 Identities = 333/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

6) SNSL254_A3097 in NC_011080


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  469 bits (1768),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 334/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

7) SN31241_39840 in NC_021902


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  469 bits (1768),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 334/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

8) SSPA2564 in NC_011147


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  469 bits (1768),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 334/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

9) spaN in NC_006511


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  469 bits (1768),  Expect = 1e-133, Method: Compositional matrix adjust.
 Identities = 334/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

10) SeAg_B3014 in NC_011149


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  468 bits (1762),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 333/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

11) spaN in NC_021844


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  468 bits (1762),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISTEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLIS+EAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

12) SBOV29181 in NC_022241


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  468 bits (1762),  Expect = 3e-133, Method: Compositional matrix adjust.
 Identities = 333/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

13) SEEH1578_23270 in NC_021810


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  467 bits (1760),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 334/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVCSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAV SSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

14) SU5_03373 in NC_017623


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  467 bits (1760),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 334/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVCSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAV SSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

15) spaN in NC_021812


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  467 bits (1760),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 334/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVCSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAV SSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

16) SeHA_C3082 in NC_011083


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  467 bits (1760),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 334/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVCSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAV SSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

17) spaN in NC_021818


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  467 bits (1759),  Expect = 5e-133, Method: Compositional matrix adjust.
 Identities = 329/336 (98%), Positives = 333/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESASEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVES SEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKAKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKK KDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

18) invJ in NC_006905


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1758),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 331/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGDLRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKG+LRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

19) invJ in NC_011294


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1758),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

20) invJ in NC_011274


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1758),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

21) invJ in NC_022221


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1758),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

22) invJ in NC_016831


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1758),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

23) spaN in NC_012125


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1758),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

24) spaN in NC_021984


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1758),  Expect = 6e-133, Method: Compositional matrix adjust.
 Identities = 332/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

25) spaN in NC_021820


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

26) invJ in NC_016856


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

27) invJ in NC_017046


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

28) STMMW_28541 in NC_016854


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

29) invJ in NC_003197


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

30) invJ in NC_016810


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

31) invJ in NC_016857


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

32) STMDT12_C29410 in NC_016860


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

33) STU288_14615 in NC_021151


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

34) invJ in NC_016863


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

35) spaN in NC_021814


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  466 bits (1756),  Expect = 9e-133, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 335/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAAWRHGAPAKSEHHNGNVSGLHHNGKSELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            P+LLAAWRH APAKSEHHNGNVSGLHHNGK+ELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPEDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKP+DKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

36) SeD_A3202 in NC_011205


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  463 bits (1744),  Expect = 8e-132, Method: Compositional matrix adjust.
 Identities = 331/336 (99%), Positives = 334/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYSGDKKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH APAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVADNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEV+DNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKLddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGK DDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

37) CFSAN001992_19065 in NC_020307


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  460 bits (1735),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 330/336 (99%), Positives = 334/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSDHKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYS++KKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGALAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH A AKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvaparmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

38) SeSA_A3045 in NC_011094


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  460 bits (1735),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 329/336 (98%), Positives = 334/336 (99%), Gaps = 0/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSDHKKDRDYGDAFVMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYS++KKDRDYGDAFVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAAWRHGALAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120
            PVLLAAWRH A AKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180
            AALLS+KNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  181  KEGAPLardvasarmaaaNTGKPddkdhkkvkdvSQLPLQPTTIADLSQLTGGDEKMPLA  240
            KEGAPLARDVA+ARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  301  DQWQNGNPQRWHLTRDDqqnpqqqqhrqqSGEEDDA  336
            DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

39) SARI_00081 in NC_010067


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  440 bits (1656),  Expect = 8e-125, Method: Compositional matrix adjust.
 Identities = 295/336 (88%), Positives = 320/336 (96%), Gaps = 1/336 (0%)

Query  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKAVEKHKTEYSDDKKDREYGDTFMMHKETAL  60
            MGDVSAVSSSGNILLPQQDEVGGLSEALKK+VEKHKTEYS+DKKDR+YGD+F+MHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PLLLAALRHGAPAKSEQHNGSVSGLHHNVKGELRIAEKLLKVTAEKSVGLVSTEA-VDKF  119
            P+LLAA RH APAKSE+HNG+VSGLHHN KGELRIAEKLLKVTAEKSVGL+S+EA VDK 
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  120  AALQSSKNRQLEGVSGKKLSADLKAVESLSELADKAAERTDDNIKVLPGDNKVIAGEGVR  179
            AAL S+KNR LE+VSGKKLSADLKAVES+SE++D+A+  +DDNIK LPGDNK IAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  180  KEGALLARDVAPSRMAAANTSKFDDKEHKKIKEASQVPLQPTTIADLSQLSGGDEKMPLA  239
            KEGA LARDVAP+RMAAANT+K DDK+HKK+K+ SQ+PLQPTTIADLSQL+GGDEKMPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  240  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQVGEFSLIPSNTQVEHRLH  299
            AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQ GEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  300  DQWQNGNPQRWHLTRDDqqnpqqqqhgqqSGEEDDA  335
            DQWQNGNPQRWHLTRDDQQNPQQQQH QQSGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

40) spaN in NC_015761


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  398 bits (1498),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 259/336 (78%), Positives = 307/336 (92%), Gaps = 3/336 (0%)

Query  1    MGDVSSVSSSRNFLLPQQDEVSGLSEALKKALEKHKTEYIDDKKDREYGDTFVMHKETAL  60
            MGDVS+VSSS N+LLPQQDEV+GLSEALKK++EKHKTEY +DKKDR+YGD+FVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAALRQGAPAKSEQHSGHASGLQHNVKGDFRIAEKLLKVTSEKSVTLVSDVKKADKT  120
            PVLLAA R+ APAKSE+H+G+ SGL+HN KG++RIAEKLLKVT+EKSV L+S   K DK+
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  AALLSSRNMQVAEVGSKKLSTDLKAV---SELADNAMGVTDDNVKAIHGDHKVIAGEGVR  177
            AALLS++N  +  V++KKLS+DLKAV   SE++DNA G++DDN+KA+ GD+K IAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  178  KDGTPLAGDVASSRMAATNTsksddkdhkkikEASQLSLQPTTIADLSQLSGGDENMPLA  237
            K+G+PLA DVA++RMAA+NT+K+DDKDHKK+K+ SQL+LQPTTIADLSQL+GGDE+MPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  238  AHSKQAMTTFPITDGVKGDDNSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  297
            A+SK  MT FP +DGVKG+D+SLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  298  DQWQNGNPQRWHLMRDDqqnpqqqqhgqHSGEEDDA  333
            DQWQNGNPQRWHL RDDQQNPQQQQH Q+SGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336

41) A464_2916 in NC_021870


> NC_003198_P5|33|G33|16761669|NP_457286.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|28511..29521|spaN|-|surface 
presentation of antigens protein (associated with 
type III secretion and virulence)
Length=336

 Score =  378 bits (1420),  Expect = 3e-106, Method: Compositional matrix adjust.
 Identities = 261/336 (78%), Positives = 308/336 (92%), Gaps = 3/336 (0%)

Query  1    MGDVSSVSSSRNFLLPQQDEVSGLSEALKKALEKHKTEYIDDKKDREYGDTFVMHKETAL  60
            MGDVS+VSSS N+LLPQQDEV+GLSEALKK++EKHKTEY +DKKDR+YGD+FVMHKETAL
Sbjct  1    MGDVSAVSSSGNILLPQQDEVGGLSEALKKTVEKHKTEYSGDKKDRDYGDAFVMHKETAL  60

Query  61   PVLLAALRQGAPAKSEQHNGHASGLQHNVKGDFRIAEKLLKVTSEKSVTlvadvkkadkt  120
            PVLLAA R+ APAKSE+HNG+ SGL+HN KG++RIAEKLLKVT+EKSV L++   K DK+
Sbjct  61   PVLLAAWRHCAPAKSEHHNGNVSGLHHNGKGELRIAEKLLKVTAEKSVGLISAEAKVDKS  120

Query  121  aallSSRNMQVAEVGSKKLSTDLKAV---SELADNAMGVTDDNVKAIHGDHKVIAGEGVR  177
            AALLS++N  +  V++KKLS+DLKAV   SE++DNA G++DDN+KA+ GD+K IAGEGVR
Sbjct  121  AALLSPKNRPLESVSGKKLSADLKAVESVSEVTDNATGISDDNIKALPGDNKAIAGEGVR  180

Query  178  KEGTPLAGDVASSRMAATNTGKSDDKDHKKIKEASQLSLQPTTIADLSQLSGGDENMPLA  237
            KEG+PLA DVA++RMAA+NTGK+DDKDHKK+K+ SQL+LQPTTIADLSQL+GGDE+MPLA
Sbjct  181  KEGAPLARDVAPARMAAANTGKPDDKDHKKVKDVSQLPLQPTTIADLSQLTGGDEKMPLA  240

Query  238  AHSKQAMTTFPITDGVKGDDNSLTYRFQRWGNDYSVNIQARQAGEFSLVPSNTQVEHRLH  297
            A+SK  MT FP +DGVKG+D+SLTYRFQRWGNDYSVNIQARQAGEFSL+PSNTQVEHRLH
Sbjct  241  AQSKPMMTIFPTADGVKGEDSSLTYRFQRWGNDYSVNIQARQAGEFSLIPSNTQVEHRLH  300

Query  298  DQWQNGNPQRWHLMrddqqnpqqqqhrqhSGEEDDA  333
            DQWQNGNPQRWHL RDDQQNPQQQQHRQ+SGEEDDA
Sbjct  301  DQWQNGNPQRWHLTRDDQQNPQQQQHRQQSGEEDDA  336