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Homologs of hrcJ gene of AY597278

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcJ
( NP_791211.1 )

type III secretion protein HrcJ

NC_004578
(Pseudomonas syringae DC3000)

4e-95

2) HrcJ
( YP_234287.1 )

type III secretion protein HrcJ

NC_007005
(Pseudomonas syringae B728a)

7e-95

3) hrcJ
( YP_273534.1 )

type III secretion component protein HrcJ

NC_005773
(Pseudomonas syringae 1448A)

1e-92

4) Pmen_0028
( YP_001185535.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_009439
(Pseudomonas mendocina ymp)

2e-71

5) rscJ
( YP_006322242.1 )

type III secretion apparatus lipoprotein RscJ

NC_017911
(Pseudomonas fluorescens A506)

7e-64

6) rscJ
( YP_002870391.1 )

putative type III secretion protein

NC_012660
(Pseudomonas fluorescens SBW25)

2e-61

7) Marme_1087
( YP_004312198.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_015276
(Marinomonas mediterranea MMB-1)

2e-56

8) hrcJ
( YP_001906477.1 )

HrcJ protein

NC_010694
(Erwinia tasmaniensis Et1/99)

3e-56

9) hrcJ
( YP_050190.1 )

type III secretion system protein

NC_004547
(Pectobacterium atrosepticum SCRI1043)

1e-55

10) PC1_2197
( YP_003017772.1 )

YscJ/HrcJ family type III secretion apparatus lipoprotein

NC_012917
(Pectobacterium carotovorum PC1)

3e-55

11) Ser39006_2905
( YP_008523287.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_022268
(Serratia sp. ATCC 39006)

3e-55

12) PCC21_022750
( YP_006646931.1 )

type III secretion protein

NC_018525
(Pectobacterium carotovorum PCC21)

3e-55

13) Dd1591_1899
( YP_003004228.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_012912
(Dickeya zeae Ech1591)

5e-55

14) hrcJ
( YP_005804077.1 )

type III secretion innermembrane protein HrcJ

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-54

15) hrcJ
( YP_002650060.1 )

Hrp/hrc secretion/translocation pathway protein HrcJ

NC_012214
(Erwinia pyrifoliae Ep1/96)

1e-54

16) Dd586_1896
( YP_003333460.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_013592
(Dickeya dadantii Ech586)

1e-54

17) hrcJ
( YP_005818269.1 )

hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcJ protein

NC_017445
(Erwinia sp. Ejp617)

2e-54

18) hrcJ
( YP_003883232.1 )

type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)

NC_014500
(Dickeya dadantii 3937)

2e-54

19) D781_3927
( YP_007346302.1 )

type III secretion apparatus lipoprotein, YscJ/HrcJ family

NC_020064
(Serratia marcescens FGI94)

2e-54

20) hrcJ
( YP_003539952.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

2e-54

21) hrcJ
( YP_003529902.1 )

type III secretion inner-membrane protein HrcJ

NC_013961
(Erwinia amylovora CFBP1430)

2e-54

• Sequence Alignments

1) hrcJ in NC_004578


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  340 bits (1276),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 234/268 (88%), Positives = 256/268 (96%), Gaps = 0/268 (0%)

Query  1    MNFLSAgllllcmlllggcSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60
            M FLSAGLLLLCML+LGGCSDETDLFTG+SEQDSNEV+ARLADQHIDARKRLEK GVVVT
Sbjct  1    MRFLSAGLLLLCMLMLGGCSDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVT  60

Query  61   VATSEMNRAVRVLDAAGLPRRSRTTLGEIFKKEGVISTPLEERARYIYALSQELEATLSQ  120
            VAT +MNRAVRVLDAAGLPR+SRT+LGEIFKKEGVISTPLEERARYIYALSQELEATLSQ
Sbjct  61   VATQDMNRAVRVLDAAGLPRQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQ  120

Query  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST  180
            IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHS+ALDPDSVRGRIQQMVASSIPGMST
Sbjct  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMST  180

Query  181  QSVDSKKFSIVFVPAAEFQETTQWVSFGPFKLDSTNLPFWNLMlwvapvglalvlligal  240
            Q+ +SKKFSIVFVPA+EFQETTQWVSFGPFKLDS NLPFWNLMLW+ P ++ALVLLI  +
Sbjct  181  QAAESKKFSIVFVPASEFQETTQWVSFGPFKLDSVNLPFWNLMLWLVPGAVALVLLIVVM  240

Query  241  lvRSDWRASLLRRIGFGSRGRSTLPARA  268
            L+R+DWRA++L+R+G+G RG S LPAR+
Sbjct  241  LLRGDWRAAVLQRVGLGRRGSSNLPART  268

2) HrcJ in NC_007005


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  339 bits (1273),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 234/268 (88%), Positives = 259/268 (97%), Gaps = 0/268 (0%)

Query  1    MKFLSAGLLLICMVLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVT  60
            M+FLSAGLLL+CM++LGGCSDETDLFTG+SEQDSNEV+ARLADQHIDARKRLEK GVVVT
Sbjct  1    MRFLSAGLLLLCMLMLGGCSDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVT  60

Query  61   VATSDMNRAVRVLNAAGLPRQSRASLGDIFKKEGVISTPLEERARYIYALSQELEATLSQ  120
            VAT DMNRAVRVL+AAGLPRQSR+SLG+IFKKEGVISTPLEERARYIYALSQELEATLSQ
Sbjct  61   VATQDMNRAVRVLDAAGLPRQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQ  120

Query  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMST  180
            IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHS+ALDPDSVRGRIQQMVASSIPGMST
Sbjct  121  IDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMST  180

Query  181  QSAESKKFSIVFVPATEFQETTQWVSFGPFKLDSANLPFWNLMlwlvpvglavllliial  240
            Q+AESKKFSIVFVPA+EFQETTQWVSFGPFKLDS NLPFWNLMLWLVP ++A++LLI+ +
Sbjct  181  QAAESKKFSIVFVPASEFQETTQWVSFGPFKLDSVNLPFWNLMLWLVPGAVALVLLIVVM  240

Query  241  llRSDWRASVLGRIGLAGRSRSTVPARA  268
            LLR+DWRA+VL R+GL+ R+ S +PAR+
Sbjct  241  LLRGDWRAAVLQRVGLGRRGSSNLPART  268

3) hrcJ in NC_005773


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  332 bits (1245),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 214/248 (87%), Positives = 239/248 (97%), Gaps = 0/248 (0%)

Query  21   DETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGLPR  80
            DETDLFTG+SEQDSNEV+ARLADQHIDARKRLEK GVVVTVAT DMNRAVRVL+AAGLPR
Sbjct  21   DETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLPR  80

Query  81   QSRASLGDIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG  140
            QSR+SLG+IFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG
Sbjct  81   QSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG  140

Query  141  EPVQPASAAVFIKHSAALDPDSVRGRIQQMVASSIPGMSAQSAESKKFSIVFVPATEFQE  200
            EPVQPASAAVFIKHS+ALDPDSVRGRIQQMVASSIPGMS+Q+AESKKFSIVFVPA+EFQE
Sbjct  141  EPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQE  200

Query  201  TTQWASFGPFKLDSEELPFWHLMlwlvpagvvvllliialllRSDWRAALLRRIGFGARS  260
            TTQW SFGPFKLDS +LPFW+LMLWLVP++V ++LLI+ +LLR+DWRAA+L+R+G+G R+
Sbjct  201  TTQWVSFGPFKLDSVNLPFWNLMLWLVPGAVALVLLIVVMLLRGDWRAAVLQRVGLGRRG  260

Query  261  RSTVPARA  268
             S +PAR+
Sbjct  261  SSNLPART  268

4) Pmen_0028 in NC_009439


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  261 bits (977),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 170/252 (68%), Positives = 216/252 (86%), Gaps = 4/252 (1%)

Query  19   SDRTDLFSGLSELDANEVIASLGEHRISARKRAEKAGVVVTVDTAEINRAVRVLEAAGLP  78
            SD TDLF+G+SE D+NEVIA L++++I ARKR EK+GVVVTV T ++NRAVRVL+AAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  79   RRARTSLGEIFKKEGVISTPLEERARYIYALSQELESTLSQIDGVIVARVHVVLPERIAP  138
            R++RTSLGEIFKKEGVISTPLEERARYIYALSQELE+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASAAVFIKHAASLEPDAVQRRIQQMVVSSIPGLASTGVESSEKFSIVFVPAAEL  198
            GEPVQPASAAVFIKH+++L+PD+V+ RIQQMV SSIPG+++ + ES  KFSIVFVPA+E+
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESK-KFSIVFVPASEF  198

Query  199  QDADTLVPFGPFLIESQKLGFWQlmswliplggllllavltllVRQDWRSVLLRRVRPRQ  258
            Q++   V+FGPF ++S +L FW+LM WL+P +  L+L ++ +L+R DWR+ +L+RV    
Sbjct  199  QETTQWVSFGPFKLDSVNLPFWNLMLWLVPGAVALVLLIVVMLLRGDWRAAVLQRV---G  255

Query  259  PASHNVSTLPSR  270
             + +  S LP+R
Sbjct  256  LGRRGSSNLPAR  267

5) rscJ in NC_017911


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  236 bits (881),  Expect = 7e-64, Method: Compositional matrix adjust.
 Identities = 133/201 (67%), Positives = 171/201 (86%), Gaps = 0/201 (0%)

Query  21   GDRVELHRQLSEQEANEVVAELADKHIRAQKTPAKDGVVVTVNTNDIGRAVRTLEAAGLP  80
            +D  +L   +SEQ++NEV+A LAD+HI A+K   K+GVVVTV T+D+ RAVR L+AAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  81   RLARTTMGDTFRKEGVISTPLEERARYIYALSQELETTLSKIDGVIVARVHVVLPERIAP  140
            R +RT++G+ F+KEGVISTPLEERARYIYALSQELE+TLS+IDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASASVFIKHDPRLDPDNIRARVRRMVASSIPGMTTAVDNPQKLTVVFVPASTYQ  200
            GEPVQPASA+VFIKH   LDPD++R+R+++MVASSIPGM+T   +++K+++VFVPAS +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  201  EQQRLVYFGPFLVPGDDLGFW  221
            E  + V FGPF + + +L FW
Sbjct  200  ETTQWVSFGPFKLDSVNLPFW  220

6) rscJ in NC_012660


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  228 bits (850),  Expect = 2e-61, Method: Compositional matrix adjust.
 Identities = 129/201 (65%), Positives = 168/201 (84%), Gaps = 0/201 (0%)

Query  28   GDRVELHRQLSEQEANEVIAELADKHIRARKIPTKDGVTVSVDTNDIGRAVRTLEAVGLP  87
            +D  +L   +SEQ++NEVIA LAD+HI ARK   K+GV V+V T+D+ RAVR L+A GLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  88   KLARATLGDTFRKEGVISTPLEERARYIYALSQELEATLSNIDGVIVARVHVVLPERIAP  147
            + +R++LG+ F+KEGVISTPLEERARYIYALSQELEATLS+IDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  148  GEPVQPASASVFIKHDPRLDPDNIRARVRRMVASSIPGMTTAVDNPQKLTVIFVPAVAYQ  207
            GEPVQPASA+VFIKH   LDPD++R+R+++MVASSIPGM+T   +++K++++FVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  208  EQKRLVYFGPFLIPADDRSFW  228
            E  + V FGPF + + + +FW
Sbjct  200  ETTQWVSFGPFKLDSVNLPFW  220

7) Marme_1087 in NC_015276


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  212 bits (787),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 120/200 (60%), Positives = 161/200 (81%), Gaps = 5/200 (2%)

Query  22   QDIELHKKLSEEDANEVIAELASRHIEAEKKATKEGVTVLVEASSMARAVRILEAAGLPR  81
            ++ +L   +SE+D+NEVIA LA +HI+A K+  K GV V V +  M RAVR+L+AAGLPR
Sbjct  21   DETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLPR  80

Query  82   KPRANFGEVFKKEGVISSPLEERARYIYALSQELESTISQIDGILIARVHVVLPERIAPG  141
            ++R+++GE+FKKEGVIS+PLEERARYIYALSQELE+T+SQIDG+++ARVHVVLPERIAPG
Sbjct  81   QSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPG  140

Query  142  EAVQPASSAVFIKHRPDLDPDVIRPRIERLVRTSIPGLSEKPD---KLSVVFVVTKAYQE  198
            E+VQPAS+AVFIKH   LDPD +R RI+++V +SIPG+S ++    K+S+VFV +  +QE
Sbjct  141  EPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQE  200

Query  199  QQQLVRVGPFLMDASDL--W  216
              Q V  GPF +D+ +L  W
Sbjct  201  TTQWVSFGPFKLDSVNLPFW  220

8) hrcJ in NC_010694


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  210 bits (783),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 123/195 (64%), Positives = 162/195 (84%), Gaps = 2/195 (1%)

Query  21   DDRVELNHGLTENDANEVAAELGRYHIQAEKRNNKDGITVLVNAEELNRAVHILDAAGLP  80
             D  +L  G++E+D+NEV A L+  HI+A KR +K+G+ V V ++++NRAV++LDAAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT+LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAARS--DKDLAIVFVPAETYQ  198
            GEPVQPASAAVFIK    LDPD +  RI++MVASS+PG+++++   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  199  DKPTEVSFGPFRVTP  213
            +    VSFGPF++ +
Sbjct  200  ETTQWVSFGPFKLDS  214

9) hrcJ in NC_004547


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  208 bits (775),  Expect = 1e-55, Method: Compositional matrix adjust.
 Identities = 122/202 (61%), Positives = 167/202 (83%), Gaps = 2/202 (0%)

Query  19   GEPIELNRGLSENDANEAISMLGRYQIGAEKRVEKTGVTLVIDAKNMERAVNILNAAGLP  78
            ++  +L  G+SE+D+NE I+ L+  +I+A KR+EK GV + + +++M+RAV +L+AAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  79   KQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVMVARVHVVLPERIAP  138
            +QSRT+LGE+F+K GVISTPLEERARYIYALSQE+EATL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASAAVFIKYRAELEPDGMEPRIRRMVASSIPGLSGK--DDKELAIVFVPAEPYQ  196
            GEPVQPASAAVFIK  + L+PD++  RI++MVASSIPG+S +  + K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  197  DTIPVVTLGPFTLTPDEMRRWQ  218
            +T   V++GPF L + ++  W+
Sbjct  200  ETTQWVSFGPFKLDSVNLPFWN  221

10) PC1_2197 in NC_012917


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  208 bits (772),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 121/202 (60%), Positives = 167/202 (83%), Gaps = 2/202 (0%)

Query  19   GEPIELNRGLSENDANEAISMLGRYQIGAEKRVDKTGVTLVIDAKNMERAVNILNAAGLP  78
            ++  +L  G+SE+D+NE I+ L+  +I+A KR++K GV + + +++M+RAV +L+AAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  79   KQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVLVARVHVVLPERIAP  138
            +QSRT+LGE+F+K GVISTPLEERARYIYALSQE+EATL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASAAVFIKYRAELEPDGMEPRIRRMVASSIPGLSGK--DDKELAIVFVPAEPYQ  196
            GEPVQPASAAVFIK  + L+PD++  RI++MVASSIPG+S +  + K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  197  DTIPVVTLGPFTLTPDEMRRWQ  218
            +T   V++GPF L + ++  W+
Sbjct  200  ETTQWVSFGPFKLDSVNLPFWN  221

11) Ser39006_2905 in NC_022268


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  208 bits (772),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 122/208 (59%), Positives = 169/208 (82%), Gaps = 5/208 (2%)

Query  22   GDQVELHRGLSENDANEVIAALGGYHIEAEKRLDKTGVTILLDKKDIDRAVNILSAAGLP  81
            +D+ +L  G+SE+D+NEVIA L++ HI+A KRL+K GV + +  +D++RAV +L AAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  82   RQARTNLGEVFQKSGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAP  141
            RQ+RT+LGE+F+K GVISTPLEERARYIYALSQE+E+TL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  142  GEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPYI  199
            GEP+QPASAAVFIK    L+PDS+  RI++MVASSIPG++ ++   K ++IVFVPA  + 
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  200  DHIPMISLGPFQFTPQEMA---QLQWVV  224
            +    +S+GPF++ + +++    + W+V
Sbjct  200  ETTQWVSFGPFKLDSVNLPFWNLMLWLV  227

12) PCC21_022750 in NC_018525


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  207 bits (770),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 121/202 (60%), Positives = 167/202 (83%), Gaps = 2/202 (0%)

Query  19   GEPIELNRGLSENDANEAISMLGRYQIGAEKRVDKTGVTLVIDAKNMERAVNILNAAGLP  78
            ++  +L  G+SE+D+NE I+ L+  +I+A KR++K GV + + +++M+RAV +L+AAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  79   KQSRTNLGEVFQKSGVISTPLEERARYIYALSQEVEATLAQIDGVLVARVHVVLPERIAP  138
            +QSRT+LGE+F+K GVISTPLEERARYIYALSQE+EATL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  139  GEPVQPASAAVFIKYRAELEPDGMEQRIRRMVASSIPGLSGK--DDKELAIVFVPAEPYQ  196
            GEPVQPASAAVFIK  + L+PD++  RI++MVASSIPG+S +  + K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  197  DTIPVVTLGPFTLTPDEMRRWQ  218
            +T   V++GPF L + ++  W+
Sbjct  200  ETTQWVSFGPFKLDSVNLPFWN  221

13) Dd1591_1899 in NC_012912


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  207 bits (768),  Expect = 5e-55, Method: Compositional matrix adjust.
 Identities = 121/198 (62%), Positives = 164/198 (83%), Gaps = 2/198 (1%)

Query  23   GDRVELHRGLSENDANEVIAALGGYHIGAEKRTDKAGVSILIDVKDMERAVNILNAAGLP  82
            +D  +L  G+SE+D+NEVIA L++ HI+A KR +K+GV + +  +DM+RAV +L+AAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  83   RQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAP  142
            RQ+RT+LG++F+K GVISTPLEERARYIYALSQE+E+TL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  143  GEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPYK  200
            GEP+QPASAAVFIK    L+PDS+  RI++MVASSIPG++ ++   K ++IVFVPA  ++
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  201  DHIPKVSLGPFQLTPQTM  218
            +    VS+GPF+L +  +
Sbjct  200  ETTQWVSFGPFKLDSVNL  217

14) hrcJ in NC_017390


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  205 bits (762),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 122/191 (64%), Positives = 158/191 (83%), Gaps = 2/191 (1%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGLP  80
            +D+ +L  G++E+D+NEV A L+  HI+A K  +K+G+ V V + ++NRAV++LDAAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT+LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK    LDPD +  RI++MVASS+PG++ ++   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  199  DKPPKVSFGPF  209
            +    VSFGPF
Sbjct  200  ETTQWVSFGPF  210

15) hrcJ in NC_012214


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  205 bits (762),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 122/191 (64%), Positives = 158/191 (83%), Gaps = 2/191 (1%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGLP  80
            +D+ +L  G++E+D+NEV A L+  HI+A K  +K+G+ V V + ++NRAV++LDAAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT+LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK    LDPD +  RI++MVASS+PG++ ++   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  199  DKPPKVSFGPF  209
            +    VSFGPF
Sbjct  200  ETTQWVSFGPF  210

16) Dd586_1896 in NC_013592


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  205 bits (764),  Expect = 1e-54, Method: Compositional matrix adjust.
 Identities = 120/193 (63%), Positives = 162/193 (84%), Gaps = 2/193 (1%)

Query  23   GDRVELHRGLSENDANEVIAALGGYHIGAEKRTDKAGVSILIDVKDMERSVNILNAAGLP  82
            +D  +L  G+SE+D+NEVIA L++ HI+A KR +K+GV + +  +DM+R+V +L+AAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  83   RQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAP  142
            RQ+RT+LG++F+K GVISTPLEERARYIYALSQE+E+TL+QIDGV+VARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  143  GEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKSE--KDLAIVFVPAEPYK  200
            GEP+QPASAAVFIK    L+PDS+  RI++MVASSIPG++ ++   K ++IVFVPA  ++
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  201  DHIPTVSLGPFQL  213
            +    VS+GPF+L
Sbjct  200  ETTQWVSFGPFKL  212

17) hrcJ in NC_017445


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  205 bits (761),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 122/191 (64%), Positives = 158/191 (83%), Gaps = 2/191 (1%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLANKDGITVMVDAAELNRAVHILDAAGLP  80
            +D+ +L  G++E+D+NEV A L+  HI+A K  +K+G+ V V + ++NRAV++LDAAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT+LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDIIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK    LDPD +  RI++MVASS+PG++ ++   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  199  DKPPKVSFGPF  209
            +    VSFGPF
Sbjct  200  ETTQWVSFGPF  210

18) hrcJ in NC_014500


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  205 bits (761),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 121/194 (63%), Positives = 161/194 (83%), Gaps = 2/194 (1%)

Query  2    ELHRGLSENDANEVIAALGGYHIGAEKRTEKTGVSILIDVKDMERAVNILNAAGLPRQAR  61
            +L  G+SE+D+NEVIA L++ HI+A KR EK GV + +  +DM+RAV +L+AAGLPRQ+R
Sbjct  24   DLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLPRQSR  83

Query  62   TNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAPGEPI  121
            T+LG++F+K GVISTPLEERARYIYALSQE+E+TL+QIDGV+VARVHVVLPERIAPGEP+
Sbjct  84   TSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPGEPV  143

Query  122  QPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKS--DKDLAIVFVPAEPYKDHIP  179
            QPASAAVFIK    L+PDS+  RI++MVASSIPG++ ++   K ++IVFVPA  +++   
Sbjct  144  QPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQETTQ  203

Query  180  TVSLGPFQLTPQTM  193
             VS+GPF+L +  +
Sbjct  204  WVSFGPFKLDSVNL  217

19) D781_3927 in NC_020064


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  205 bits (761),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 121/195 (63%), Positives = 163/195 (84%), Gaps = 2/195 (1%)

Query  22   GDETVLNSNLSESDANDIVAALNHYHIAADKRVEKSGVSVLVAAADIERSVNILDAAGLP  81
            +DET L + +SE D+N+++A L + HI A KR+EK+GV V VA+ D++R+V +LDAAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  82   RKARTNLGEVFQKSGVISSPMEERARYIYALSQEVESTLSQIDGVVVARVHVVLPERIAP  141
            R++RT+LGE+F+K GVIS+P+EERARYIYALSQE+E+TLSQIDGV+VARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  142  GEPVQPASASVFIKYADSLDPDSIEPRIRRLVATSIPGLVGR--EDKDLAIVFVPAKAWR  199
            GEPVQPASA+VFIK + +LDPDS+  RI+++VA+SIPG+  +  E K ++IVFVPA   +
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  200  DQTPVVNLGPFALTP  214
            + T  V++GPF L +
Sbjct  200  ETTQWVSFGPFKLDS  214

20) hrcJ in NC_013971


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  204 bits (760),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 122/191 (64%), Positives = 157/191 (83%), Gaps = 2/191 (1%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLTNKEGITVLVDAAELNRAVHILDAAGLP  80
            +D+ +L  G++E+D+NEV A L+  HI+A K  +K G+ V V + ++NRAV++LDAAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT+LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK    LDPD +  RI++MVASS+PG++ ++   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  199  DKPPQVSFGPF  209
            +    VSFGPF
Sbjct  200  ETTQWVSFGPF  210

21) hrcJ in NC_013961


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  204 bits (760),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 122/191 (64%), Positives = 157/191 (83%), Gaps = 2/191 (1%)

Query  21   NDQVELNHGLTENDANEVAAELGRYHIQAEKLTNKEGITVLVDAAELNRAVHILDAAGLP  80
            +D+ +L  G++E+D+NEV A L+  HI+A K  +K G+ V V + ++NRAV++LDAAGLP
Sbjct  20   SDETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVVVTVATQDMNRAVRVLDAAGLP  79

Query  81   RPARTNLGEVFQKNGVISTPLEERARYIYALSQEVESTLSQIDGVIVARVHVVLPERIAP  140
            R +RT+LGE+F+K+GVISTPLEERARYIYALSQE+E+TLSQIDGVIVARVHVVLPERIAP
Sbjct  80   RQSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAP  139

Query  141  GEPVQPASAAVFIKYRPDLDPDVIEPRIRRMVASSLPGLAGRS--DKDLAIVFVPAESYQ  198
            GEPVQPASAAVFIK    LDPD +  RI++MVASS+PG++ ++   K ++IVFVPA  +Q
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  199  DKPPQVSFGPF  209
            +    VSFGPF
Sbjct  200  ETTQWVSFGPF  210

22) VPBB_1548 in NC_019955


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  116 bits (423),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 81/188 (44%), Positives = 130/188 (70%), Gaps = 7/188 (3%)

Query  21   QTELYTNVSQKEGNEMLSILLSEGVVATKEPDKDNKVKLMVDSSQIAFAVDALKRKGYPR  80
            +T+L+T +S++++NE+++ L  + + A K  +K+  V + V + ++  AV  L   G PR
Sbjct  22   ETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVV-VTVATQDMNRAVRVLDAAGLPR  80

Query  81   EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRP  140
            +  ++L E+F K+++IS+PL ERAR +YA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   QSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  141  GERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  195
            GE   PASA+VFIKH++ +  DS   +I+ +V +SI G++ +     ++S+V VP+SE +
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  196  VTTQSNQF  203
             TTQ   F
Sbjct  200  ETTQWVSF  207

23) N646_0755 in NC_022349


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 130/188 (70%), Gaps = 7/188 (3%)

Query  20   QTELYTNVTQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDSSQIAFAVDALKRKGYPR  79
            +T+L+T ++++++NE+++ L  + + A K  +K+  V + V + ++  AV  L   G PR
Sbjct  22   ETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVV-VTVATQDMNRAVRVLDAAGLPR  80

Query  80   EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRP  139
            +  ++L E+F K+++IS+PL ERAR +YA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   QSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  140  GERPTPASASVFIKHAADIALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  194
            GE   PASA+VFIKH++ +  DS   +I+ +V +SI G++ +     ++S+V VP+SE +
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  195  VATQNNQF  202
             +TQ   F
Sbjct  200  ETTQWVSF  207

24) VEA_003344 in NC_013456


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 79/188 (43%), Positives = 130/188 (70%), Gaps = 7/188 (3%)

Query  20   QTELYTNVTQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDSSQIAFAVDALKRKGYPR  79
            +T+L+T ++++++NE+++ L  + + A K  +K+  V + V + ++  AV  L   G PR
Sbjct  22   ETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVV-VTVATQDMNRAVRVLDAAGLPR  80

Query  80   EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRP  139
            +  ++L E+F K+++IS+PL ERAR +YA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   QSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  140  GERPTPASASVFIKHAADIALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  194
            GE   PASA+VFIKH++ +  DS   +I+ +V +SI G++ +     ++S+V VP+SE +
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  195  IATQNNQF  202
             +TQ   F
Sbjct  200  ETTQWVSF  207

25) M892_04620 in NC_022269


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  116 bits (424),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 82/190 (44%), Positives = 131/190 (69%), Gaps = 7/190 (3%)

Query  16   QTELYTGVSQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDNAQIAFAVDALKRKGYPR  75
            +T+L+TG+S++++NE+++ L  + + A K  +K+  V + V   ++  AV  L   G PR
Sbjct  22   ETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVV-VTVATQDMNRAVRVLDAAGLPR  80

Query  76   EQFSTLKEVFPKDDLISSPLAERARLIYAKSQELSSTLSQIDGVLVARVHVVLEDQNLRP  135
            +  ++L E+F K+++IS+PL ERAR IYA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   QSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  136  GERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  190
            GE   PASA+VFIKH++ +  DS   +I+ +V +SI G++ +     ++S+V VP+SE +
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  191  VTSQGNQFES  200
             T+Q   F +
Sbjct  200  ETTQWVSFGP  209

26) VIBHAR_01707 in NC_009783


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  116 bits (425),  Expect = 7e-28, Method: Compositional matrix adjust.
 Identities = 82/190 (44%), Positives = 131/190 (69%), Gaps = 7/190 (3%)

Query  25   QTELYTGVSQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDNAQIAFAVDALKRKGYPR  84
            +T+L+TG+S++++NE+++ L  + + A K  +K+  V + V   ++  AV  L   G PR
Sbjct  22   ETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVV-VTVATQDMNRAVRVLDAAGLPR  80

Query  85   EQFSTLKEVFPKDDLISSPLAERARLIYAKSQELSSTLSQIDGVLVARVHVVLEDQNLRP  144
            +  ++L E+F K+++IS+PL ERAR IYA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   QSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  145  GERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  199
            GE   PASA+VFIKH++ +  DS   +I+ +V +SI G++ +     ++S+V VP+SE +
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  200  VTSQGNQFES  209
             T+Q   F +
Sbjct  200  ETTQWVSFGP  209

27) VP1690 in NC_004603


> AY597278|33|G33|51103065|AAT96211.1|Pseudomonas_viridiflava_PNA3.3a|-|28416..29222|hrcJ|-|HrcJ
Length=268

 Score =  115 bits (420),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 80/188 (43%), Positives = 130/188 (70%), Gaps = 7/188 (3%)

Query  21   QTELYTNVSQKEGNEMLSILLSEGVVATKEPDKDNKVKLMVDSSQIAFAVDALKRKGYPR  80
            +T+L+T +S++++NE+++ L  + + A K  +K+  V + V + ++  AV  L   G PR
Sbjct  22   ETDLFTGMSEQDSNEVIARLADQHIDARKRLEKGGVV-VTVATQDMNRAVRVLDAAGLPR  80

Query  81   EQFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRP  140
            +  ++L E+F K+++IS+PL ERAR +YA SQEL +TLSQIDGV+VARVHVVL ++ + P
Sbjct  81   QSRTSLGEIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPER-IAP  139

Query  141  GERPTPASASVFIKHAADVALDSYVPQIKLLVNNSIEGLNYD-----RISVVMVPSSEVR  195
            GE   PASA+VFIKH++ +  DS   +I+ +V +SI G++ +     ++S+V VP+SE +
Sbjct  140  GEPVQPASAAVFIKHSTALDPDSVRGRIQQMVASSIPGMSTQAAESKKFSIVFVPASEFQ  199

Query  196  VATQSNQF  203
             +TQ   F
Sbjct  200  ETTQWVSF  207