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Homologs of HPB8_726 gene of NC_014256_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) HPB8_726
( YP_003728747.1 )

chitin synthase regulatory factor 3

NC_014256
(Helicobacter pylori B8)

2e-109

100

2) K750_04185
( YP_007982193.1 )

hypothetical protein

NC_021217
(Helicobacter pylori UM037)

2e-106

3) HELPY_0828
( YP_003057564.1 )

hypothetical protein

NC_012973
(Helicobacter pylori B38)

5e-106

4) HPG27_478
( YP_002266107.1 )

hypothetical protein

NC_011333
(Helicobacter pylori G27)

5e-106

5) HPSJM_02690
( YP_003928451.1 )

hypothetical protein

NC_014560
(Helicobacter pylori SJM180)

7e-106

6) HPKB_0822
( YP_005762330.1 )

hypothetical protein

NC_017354
(Helicobacter pylori 52)

5e-105

7) HPPN135_02540
( YP_005789725.1 )

hypothetical protein

NC_017379
(Helicobacter pylori Puno135)

7e-105

8) HPLT_02570
( YP_005772658.1 )

hypothetical protein

NC_017362
(Helicobacter pylori Lithuania75)

8e-105

9) K747_06655
( YP_007979518.1 )

hypothetical protein

NC_021215
(Helicobacter pylori UM032)

3e-104

10) K748_07905
( YP_008337435.1 )

hypothetical protein

NC_021882
(Helicobacter pylori UM298)

3e-104

11) K749_01295
( YP_007980056.1 )

hypothetical protein

NC_021216
(Helicobacter pylori UM299)

3e-104

12) HPPC_02550
( YP_003926800.1 )

hypothetical protein

NC_014555
(Helicobacter pylori PeCan4)

4e-104

13) HPOK113_0541
( YP_007536655.1 )

hypothetical protein

NC_020508
(Helicobacter pylori OK113)

6e-104

14) HPAG1_0493
( YP_627234.1 )

hypothetical protein

NC_008086
(Helicobacter pylori HPAG1)

2e-103

15) HPP12_0525
( YP_002301159.1 )

hypothetical protein

NC_011498
(Helicobacter pylori P12)

2e-102

16) HPIN_04305
( YP_005782170.1 )

hypothetical protein

NC_017372
(Helicobacter pylori India7)

6e-102

17) HPB14_04025
( YP_006219520.1 )

hypothetical protein

NC_017733
(Helicobacter pylori HUP-B14)

2e-98

18) HPELS_03925
( YP_005424905.1 )

hypothetical protein

NC_017063
(Helicobacter pylori ELS37)

3e-98

19) jhp0468
( NP_223186.1 )

hypothetical protein

NC_000921
(Helicobacter pylori J99)

2e-97

20) HPF57_0549
( YP_005777263.1 )

hypothetical protein

NC_017367
(Helicobacter pylori F57)

7e-97

21) HP0519
( NP_207316.1 )

hypothetical protein

NC_000915
(Helicobacter pylori 26695)

2e-96

22) C694_02670
( YP_006934440.1 )

hypothetical protein

NC_018939
(Helicobacter pylori 26695)

2e-96

23) C695_02670
( YP_006893005.1 )

hypothetical protein

NC_018937
(Helicobacter pylori Rif1)

2e-96

24) C730_02670
( YP_006936046.1 )

hypothetical protein

NC_018938
(Helicobacter pylori Rif2)

2e-96

25) HPF32_0499
( YP_005775723.1 )

hypothetical protein

NC_017366
(Helicobacter pylori F32)

3e-95

26) K751_03215
( YP_007983623.1 )

hypothetical protein

NC_021218
(Helicobacter pylori UM066)

7e-95

27) hp2017_0498
( YP_005783486.1 )

hypothetical protein

NC_017374
(Helicobacter pylori 2017)

4e-93

28) hp2018_0500
( YP_005791328.1 )

hypothetical protein

NC_017381
(Helicobacter pylori 2018)

4e-93

29) hp908_0518
( YP_005765021.1 )

hypothetical protein

NC_017357
(Helicobacter pylori 908)

4e-93

30) KHP_0799
( YP_005793191.1 )

hypothetical protein

NC_017382
(Helicobacter pylori 51)

3e-88

31) HPPC18_02480
( YP_006228762.1 )

hypothetical protein

NC_017742
(Helicobacter pylori PeCan18)

1e-85

32) HPGAM_02650
( YP_005780253.1 )

hypothetical protein

NC_017371
(Helicobacter pylori Gambia94/24)

9e-86

33) MWE_1004
( YP_006338492.1 )

hypothetical protein

NC_017926
(Helicobacter pylori XZ274)

6e-85

34) HPPN120_02515
( YP_005788181.1 )

hypothetical protein

NC_017378
(Helicobacter pylori Puno120)

6e-79

35) Hac_0877
( YP_664658.1 )

hypothetical protein

NC_008229
(Helicobacter acinonychis Sheeba)

6e-76

36) HMPREF0462_0902
( YP_005785469.1 )

Sel1 repeat superfamily protein

NC_017375
(Helicobacter pylori 83)

2e-71

37) HMPREF4655_21086
( YP_005770173.1 )

Sel1 repeat superfamily protein

NC_017360
(Helicobacter pylori 35A)

2e-71

38) HPF16_0835
( YP_005779070.1 )

hypothetical protein

NC_017368
(Helicobacter pylori F16)

6e-71

39) HPOK310_0809
( YP_007538443.1 )

hypothetical protein

NC_020509
(Helicobacter pylori OK310)

9e-71

40) HPSA_02530
( YP_005771122.1 )

hypothetical protein

NC_017361
(Helicobacter pylori SouthAfrica7)

7e-67

41) HPSA20_0559
( YP_008471520.1 )

sel1 repeat family protein

NC_022130
(Helicobacter pylori SouthAfrica20)

3e-62

42) HPSH112_04455
( YP_006227585.1 )

hypothetical protein

NC_017741
(Helicobacter pylori Shi112)

5e-58

43) HPCU_02830
( YP_005766642.1 )

hypothetical protein

NC_017358
(Helicobacter pylori Cuz20)

7e-58

44) HCD_06400
( YP_006221492.1 )

hypothetical protein

NC_017735
(Helicobacter cetorum MIT 99-5656)

2e-57

45) HPSH417_02470
( YP_006224141.1 )

hypothetical protein

NC_017739
(Helicobacter pylori Shi417)

5e-57

46) HPSH169_02660
( YP_006225724.1 )

hypothetical protein

NC_017740
(Helicobacter pylori Shi169)

1e-56

47) HPAKL86_03920
( YP_007018854.1 )

hypothetical protein

NC_019563
(Helicobacter pylori Aklavik86)

2e-56

48) HPSAT_04180
( YP_005768480.1 )

hypothetical protein

NC_017359
(Helicobacter pylori Sat464)

3e-56

49) HPSH_04330
( YP_001910331.1 )

hypothetical protein

NC_010698
(Helicobacter pylori Shi470)

7e-56

50) HPAKL86_02925
( YP_007018657.1 )

hypothetical protein

NC_019563
(Helicobacter pylori Aklavik86)

8e-50

• Sequence Alignments

1) HPB8_726 in NC_014256


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  388 bits (1458),  Expect = 2e-109, Method: Compositional matrix adjust.
 Identities = 283/283 (100%), Positives = 283/283 (100%), Gaps = 0/283 (0%)

Query  1    MFKDFYRTTlsfnplllllvlllpfslCIADEYISISDDWDERARNQWDEIARNHKTYYF  60
            MFKDFYRTTLSFNPLLLLLVLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYYF
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYYF  60

Query  61   ENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIK  120
            ENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIK
Sbjct  61   ENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIK  120

Query  121  gygsgllggalvlgRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLAF  180
            GYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLAF
Sbjct  121  GYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLAF  180

Query  181  TSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQM  240
            TSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQM
Sbjct  181  TSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQM  240

Query  241  GEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283
            GEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  241  GEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

2) K750_04185 in NC_021217


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  378 bits (1422),  Expect = 2e-106, Method: Compositional matrix adjust.
 Identities = 267/284 (95%), Positives = 273/284 (97%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkplllllvlllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAQGLGMKKDLKQALKTYRHVVRMFSNKSTNYFANNFRLPNLV  180
            KGYGSGLLGGAL+LGRMQAQGLGMKKDLKQ LKTYRHVVRMFSNKSTNYFANNFRLPNL 
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGVRKQKNRGKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLG RK+K+R+KKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

3) HELPY_0828 in NC_012973


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  377 bits (1416),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 266/284 (94%), Positives = 272/284 (96%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsslksllllpvlllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLS    LLLL +LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAEGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNIILLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGVRKQKNRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLG RK+K+RAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

4) HPG27_478 in NC_011333


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  377 bits (1416),  Expect = 5e-106, Method: Compositional matrix adjust.
 Identities = 266/284 (94%), Positives = 274/284 (97%), Gaps = 1/284 (0%)

Query  10   MFKDFYRTTlsflnplllllvlllsfslCIADEYISISDDWDERARNQWDEIARNHKTYY  69
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  70   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAI  129
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  130  KgygsgllggalilgRMQAEGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  189
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  190  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  249
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  250  MGEILYRIGIAYKEGLGVRKQKDRAKKFLQKSAEFGYEKAMEAL  293
            MGEILYRIGIAYKEGLG RK+KDRAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

5) HPSJM_02690 in NC_014560


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  376 bits (1414),  Expect = 7e-106, Method: Compositional matrix adjust.
 Identities = 267/284 (95%), Positives = 273/284 (97%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkslllllvlllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAQGLGMKKDLKQALKTYRHVVRMFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LGRMQAQGLGMKKDLKQ LKTYRHVVRMFSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRKKKNRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRKKK+RAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

6) HPKB_0822 in NC_017354


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  374 bits (1404),  Expect = 5e-105, Method: Compositional matrix adjust.
 Identities = 267/284 (95%), Positives = 273/284 (97%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkplllllvlllsfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgYMQAEGLGMKKDLKQALKTYRHVVRMFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LG MQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRK+K RAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

7) HPPN135_02540 in NC_017379


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  373 bits (1402),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 263/284 (93%), Positives = 272/284 (96%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkplllllvlllsfslCMADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL++LL     C+ADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAQGLGMKKDLKQALKTYRHVIRMFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LGRMQAQGLGMKKDLKQ LKTYRHV+RMFSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGVRKQKNRGKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLG RK+K+R+KKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

8) HPLT_02570 in NC_017362


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  373 bits (1401),  Expect = 8e-105, Method: Compositional matrix adjust.
 Identities = 264/284 (93%), Positives = 272/284 (96%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkplllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KGYGSGMLGGALILGRMQAQGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  180
            KGYGSG+LGGAL+LGRMQAQGLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSSLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNIILLKQQ  240
            FTSMLIGSRFIDLS+LSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRK+K RAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

9) K747_06655 in NC_021215


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  371 bits (1394),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 265/284 (94%), Positives = 272/284 (96%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkslllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAKNAI  120
            FENGLDHFNQGQY+QAFKDF+LAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgYMQAEGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LG MQA+GLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

10) K748_07905 in NC_021882


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  371 bits (1394),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 265/284 (94%), Positives = 272/284 (96%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkslllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAKNAI  120
            FENGLDHFNQGQY+QAFKDF+LAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgYMQAEGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LG MQA+GLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

11) K749_01295 in NC_021216


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  371 bits (1394),  Expect = 3e-104, Method: Compositional matrix adjust.
 Identities = 265/284 (94%), Positives = 272/284 (96%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkslllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAKNAI  120
            FENGLDHFNQGQY+QAFKDF+LAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgYMQAEGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LG MQA+GLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

12) HPPC_02550 in NC_014555


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  370 bits (1392),  Expect = 4e-104, Method: Compositional matrix adjust.
 Identities = 264/284 (93%), Positives = 272/284 (96%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkplllllvlllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQASKDFKLAQEYGIGLGNVYLAKMYLEGKGVKVDYKKAQFYAENAI  120
            FENGLDHFNQGQY+QA KDFKLAQEY+IGLG+VYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAQGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LGRMQAQGLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLSWEDIAEISSNIILLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTL WEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

13) HPOK113_0541 in NC_020508


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  370 bits (1390),  Expect = 6e-104, Method: Compositional matrix adjust.
 Identities = 264/284 (93%), Positives = 272/284 (96%), Gaps = 1/284 (0%)

Query  10   IFKDFYRTTlsflkplllllvlllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  69
            +FKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  70   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQLYAQNAI  129
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQ+YAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  130  KgygsgllggalilgRMQAEGLGMKKDLKQVLKTYRYVVRMFSNKSTNYFANNFRLPNLA  189
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQVLKTYR VVRMFSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  190  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQQ  249
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  250  MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL  293
            MGEILYRIGIAYKEGLGTRK+K RAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

14) HPAG1_0493 in NC_008086


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  368 bits (1383),  Expect = 2e-103, Method: Compositional matrix adjust.
 Identities = 262/284 (93%), Positives = 271/284 (96%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkplllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGIGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIG+GSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KGYGSGFLGGALILGYMQAEGLGMKKDLKQALKTYRHVIRIFSNKSTNYFANNFRLPNLA  180
            KGYGSG+LGGAL+LG MQA+GLGMKKDLKQ LKTYRHV+R+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRK+K RAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

15) HPP12_0525 in NC_011498


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  365 bits (1370),  Expect = 2e-102, Method: Compositional matrix adjust.
 Identities = 267/285 (94%), Positives = 272/285 (96%), Gaps = 3/285 (1%)

Query  1    MFKDFYRTTlsflkplllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgYMQAEGLGMKKDLKQALKTYRHVVRMFSNKSTN-FANNFRLPNLA  179
            KGYGSGLLGGAL+LG MQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN FANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  180  EFTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  239
             FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  240  QMGEILYRIGIAYKEGLGTRKKKNRAKKFLQKSAEFGYEKAMEAL  284
            QMGEILYRIGIAYKEGLGTRKKK+RAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

16) HPIN_04305 in NC_017372


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  363 bits (1364),  Expect = 6e-102, Method: Compositional matrix adjust.
 Identities = 263/285 (93%), Positives = 270/285 (95%), Gaps = 3/285 (1%)

Query  1    MFKDFYRTTlsflkplllllglllsfslCMADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL+ LL     C+ADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLNHFNQGQYKQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGL+HFNQGQY+QAFKDF+LAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAQGLGMKKDLKQALKTYRHVVRMFSNKSTN-FANNFRLPNLA  179
            KGYGSGLLGGAL+LGRMQAQGLGMKKDLKQ LKTYRHVVRMFSNKSTN FANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  180  EFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNIILLKQ  239
             FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNIILLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  240  QMGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSIEFGYEKAMEAL  284
            QMGEILYRIGIAYKEGLGTRK+K RAKKFLQKS EFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

17) HPB14_04025 in NC_017733


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  352 bits (1321),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 266/284 (94%), Positives = 273/284 (97%), Gaps = 1/284 (0%)

Query  1    MFKDFYRTTlsflkplllllvlllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAEGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  180
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQQ  240
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRkkkdkakkflqkSAEFGYEKAMEAL  284
            MGEILYRIGIAYKEGLGTRKKKD+AKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

18) HPELS_03925 in NC_017063


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  351 bits (1317),  Expect = 3e-98, Method: Compositional matrix adjust.
 Identities = 253/284 (90%), Positives = 262/284 (93%), Gaps = 9/284 (3%)

Query  1    MFEDFYRTTlsflkpfllllglllpfslCIADEYISINDDWDE--------TARNHKTYY  52
            MF DFYRTTLSF   +LLL+ LL     CIADEYISI+DDWDE         ARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  112
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KgygsgllggalilgRMQAQGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  172
            KGYGSGLLGGAL+LGRMQAQGLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  173  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNITLLKQQ  232
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  233  MGEILYRIGIAYKEGLGVRKQKNRGKKFLQKSAEFGYEKAMEAL  276
            MGEILYRIGIAYKEGLG RK+K+R+KKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

19) jhp0468 in NC_000921


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  348 bits (1307),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 252/284 (89%), Positives = 262/284 (93%), Gaps = 2/284 (0%)

Query  1    MFEDFYRTTlsflrslllllglllpfslCIADEYISISDDWDERARNQWDETARNHKTYY  60
            MF DFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDE ARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGNVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLG+VYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAEGLGMKKDLKQALKTYRHVVRMFSNKSAN-FANKFGSNLAE  179
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ LKTYRHVVRMFSNKS+N FAN+F      
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  180  FTSMLIGSRFIDLSGLSANPIKFGNKFGILVKKALQIKDNTLSWEDIAEISSNIILLKQQ  239
            FTSMLIGSRFIDLSGLSANPIKFG+KFGILV K+ QIKD+TL WEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283
            MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

20) HPF57_0549 in NC_017367


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  346 bits (1300),  Expect = 7e-97, Method: Compositional matrix adjust.
 Identities = 249/284 (88%), Positives = 263/284 (93%), Gaps = 2/284 (0%)

Query  1    MFKDFYRTTfsflkplllllglllpfslCIAGEYISISDDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTT+SF   LLLL+ LL     CIA+EYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKTAQEYGIGLGSVYLAKMYLDGKGVKVDYKKAQLYAENAI  120
            FENGLDHFNQGQY+QAFKDFK AQEY+IGLGSVYLAKMYL+GKGVKVDYKKAQ+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KGYGSGMLGGALILGRMQAQGLGMKKDLKQALKTYRHVVRIFSNKSTN-FANKFGSNLAE  179
            KGYGSG+LGGAL+LGRMQAQGLGMKKDLKQ LKTYRHVVR+FSNKSTN FAN+F      
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  180  FTSMLIGSRFIDLSSLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQQ  239
            FTSMLIGSRFIDLS+LSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  240  MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL  283
            MGEILYRIGIAYKEGLGTRK+K RAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

21) C694_02670 in NC_018939


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  345 bits (1294),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 257/285 (91%), Positives = 263/285 (93%), Gaps = 11/285 (3%)

Query  1    MFKDFYRTTlsflkplllllvlllpfslCIADEYISISDDWDE--------IVRNHKTYY  52
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDE        I RNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYQQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAI  112
            FENGLDHFNQGQYQQAFKDF+LAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KgygsgllggalilgRMQAEGLGMKKDLKQALKTYRHVVRMFSNKSTN-FANNFRLPNLA  171
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN FANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  EFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQ  231
             FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  232  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  276
            QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

22) HP0519 in NC_000915


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  345 bits (1294),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 257/285 (91%), Positives = 263/285 (93%), Gaps = 11/285 (3%)

Query  1    MFKDFYRTTlsflkplllllvlllpfslCIADEYISISDDWDE--------IVRNHKTYY  52
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDE        I RNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYQQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAI  112
            FENGLDHFNQGQYQQAFKDF+LAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KgygsgllggalilgRMQAEGLGMKKDLKQALKTYRHVVRMFSNKSTN-FANNFRLPNLA  171
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN FANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  EFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQ  231
             FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  232  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  276
            QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

23) C695_02670 in NC_018937


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  345 bits (1294),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 257/285 (91%), Positives = 263/285 (93%), Gaps = 11/285 (3%)

Query  1    MFKDFYRTTlsflkplllllvlllpfslCIADEYISISDDWDE--------IVRNHKTYY  52
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDE        I RNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYQQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAI  112
            FENGLDHFNQGQYQQAFKDF+LAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KgygsgllggalilgRMQAEGLGMKKDLKQALKTYRHVVRMFSNKSTN-FANNFRLPNLA  171
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN FANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  EFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQ  231
             FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  232  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  276
            QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

24) C730_02670 in NC_018938


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  345 bits (1294),  Expect = 2e-96, Method: Compositional matrix adjust.
 Identities = 257/285 (91%), Positives = 263/285 (93%), Gaps = 11/285 (3%)

Query  1    MFKDFYRTTlsflkplllllvlllpfslCIADEYISISDDWDE--------IVRNHKTYY  52
            MFKDFYRTTLSF   LLLL++LL     CIADEYISISDDWDE        I RNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYQQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAI  112
            FENGLDHFNQGQYQQAFKDF+LAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KgygsgllggalilgRMQAEGLGMKKDLKQALKTYRHVVRMFSNKSTN-FANNFRLPNLA  171
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN FANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  EFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQ  231
             FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNI LLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  232  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  276
            QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

25) HPF32_0499 in NC_017366


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  341 bits (1281),  Expect = 3e-95, Method: Compositional matrix adjust.
 Identities = 248/280 (89%), Positives = 256/280 (92%), Gaps = 2/280 (0%)

Query  1    MLKDFYRTTlsllnpllllwglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            M+KDFYRTTLS+   LLLL  LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKVQFYAKNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKK QFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgRMQAEGLGMKKDLKQALKTYRSVVRMFSNKSTN-FVNKFGSNLAE  179
            KGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ LKTYR VVRMFSNKSTN F N+F      
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSLQIKDKTLLWEDIAEISSNIILLKQQ  239
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KS QIKDKTLLWEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  240  MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKA  279
            MGEILYRIGIAYKEGLGTRK+K RAKKFLQKSAEFGYEKA
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

26) K751_03215 in NC_021218


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  340 bits (1275),  Expect = 7e-95, Method: Compositional matrix adjust.
 Identities = 261/280 (94%), Positives = 269/280 (97%), Gaps = 1/280 (0%)

Query  1    MFKDFYRTTlsflkplllllvlllpfslCIADEYISISYDWDERARNQWDEIARNHKTYY  60
            MFKDFYRTTLSF   LLLL++LL     CIADEYISIS DWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KGYGSGFLGGALILGYMQAQGLGMKKDLKQALKTYRHVVRIFSNKSTNYFANNFRLPNLA  180
            KGYGSG+LGGAL+LG MQAQGLGMKKDLKQ LKTYRHVVR+FSNKSTNYFANNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  FTSMLIGSRFIDLSSLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  240
            FTSMLIGSRFIDLS+LSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  241  MGEILYRIGIAYKEGLGTRkkkdkakkflqkSAEFGYEKA  280
            MGEILYRIGIAYKEGLGTRKKKD+AKKFLQKSAEFGYEKA
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

27) hp2017_0498 in NC_017374


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  334 bits (1253),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 260/285 (92%), Positives = 268/285 (95%), Gaps = 3/285 (1%)

Query  1    MFEDFYRTTlsflkplllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MF DFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgYMQAEGLGMKKDLKQALKTYRHVVRMfsnkstn-ftnnfRLPNLA  179
            KGYGSGLLGGAL+LG MQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN F+NNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  180  EFTSMLIGSRFIDLSGLSANPIKFGNKFGILVKKALQIKDNTLSWEDIAEISSNIILLKQ  239
             FTSMLIGSRFIDLSGLSANPIKFG+KFGILV K+ QIKD+TL WEDIAEISSNIILLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  240  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  284
            QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

28) hp2018_0500 in NC_017381


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  334 bits (1253),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 260/285 (92%), Positives = 268/285 (95%), Gaps = 3/285 (1%)

Query  1    MFEDFYRTTlsflkplllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MF DFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgYMQAEGLGMKKDLKQALKTYRHVVRMfsnkstn-ftnnfRLPNLA  179
            KGYGSGLLGGAL+LG MQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN F+NNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  180  EFTSMLIGSRFIDLSGLSANPIKFGNKFGILVKKALQIKDNTLSWEDIAEISSNIILLKQ  239
             FTSMLIGSRFIDLSGLSANPIKFG+KFGILV K+ QIKD+TL WEDIAEISSNIILLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  240  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  284
            QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

29) hp908_0518 in NC_017357


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  334 bits (1253),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 260/285 (92%), Positives = 268/285 (95%), Gaps = 3/285 (1%)

Query  1    MFEDFYRTTlsflkplllllglllpfslCIADEYISISDDWDERARNQWDEIARNHKTYY  60
            MF DFYRTTLSF   LLLL+ LL     CIADEYISISDDWDERARNQWDEIARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  61   FENGLDHFNQGQYKQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  120
            FENGLDHFNQGQY+QAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  121  KgygsgllggalilgYMQAEGLGMKKDLKQALKTYRHVVRMfsnkstn-ftnnfRLPNLA  179
            KGYGSGLLGGAL+LG MQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN F+NNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  180  EFTSMLIGSRFIDLSGLSANPIKFGNKFGILVKKALQIKDNTLSWEDIAEISSNIILLKQ  239
             FTSMLIGSRFIDLSGLSANPIKFG+KFGILV K+ QIKD+TL WEDIAEISSNIILLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  240  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  284
            QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

30) KHP_0799 in NC_017382


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  318 bits (1191),  Expect = 3e-88, Method: Compositional matrix adjust.
 Identities = 243/284 (86%), Positives = 253/284 (90%), Gaps = 10/284 (3%)

Query  1    MFKDFYRTTfsflkplllllglllpfslCIAGEYISISDDWDE--------IARNHKTYY  52
            MFKDFYRTT+SF   LLLL+ LL     CIA+EYISISDDWDE        IARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYQQAFEDFKTAQEYSIWLGSVYLAKMYLEGKGVKVDYKKAQFYAKNAI  112
            FENGLDHFNQGQYQQAF DFK AQEYSI LGSVYLAKMYLEGKGVKVDYKKAQFYA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KGYGSGMLGGALILGYMQAEGLGMKKDLKQVLKTYRHVVRIFSNKSTN-FVNKFGSNLAE  171
            KGYGSG+LGGAL+LG MQA+GLGMKKDLKQVLKTYRHVVR+FSNKSTN F N+F      
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNIILLKQQ  231
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KSTQIKDKTLLWEDIAEISSNIILLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  232  MGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSAEFGYEKAMEAL  275
            MGEILYRIGIAYKEGLGTRK+K RAKKFLQKSAEFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

31) HPPC18_02480 in NC_017742


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  309 bits (1158),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 243/285 (86%), Positives = 257/285 (91%), Gaps = 11/285 (3%)

Query  1    MFEDFYRTTlsflkpfllllglllpfslCIADEYISINDDWDE--------TARNHKTYY  52
            MF DFYRTTLSF   +LLL+ LL     CIADEYISI+DDWDE         ARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYKQAFKDFRLAQEYGIGLGSVYLAKMYLEGKGVKVDYKKVQLYAENAI  112
            FENGLDHFNQGQY+QAFKDF+LAQEY+IGLGSVYLAKMYLEGKGVKVDYKK Q+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KgygsgllggtlilgRMQAEGLGMKKDLKQALKTYRHVVRMfsnkstn-ftnnfRLPNLA  171
            KGYGSGLLGG+L+LGRMQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN F+NNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  EFTSMLIGSRFIDLSGLSANPEKFGKKFGILVKKALQIKDNTLSWEDIAEISSNIILLKQ  231
             FTSMLIGSRFIDLSGLSANP KFGKKFGILV K+ QIKD+TL WEDIAEISSNIILLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  232  QMGEILYRIGIAYKEGLGVRKKKDRAKKFLQKSAEFGYEKAMEAL  276
            QMGEILYRIGIAYKEGLG RKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

32) HPGAM_02650 in NC_017371


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  309 bits (1159),  Expect = 9e-86, Method: Compositional matrix adjust.
 Identities = 245/285 (86%), Positives = 259/285 (91%), Gaps = 11/285 (3%)

Query  1    MFEDFYRTTlsflkpfllllglllpfslCIADEYISINDDWDE--------TARNHKTYY  52
            MF DFYRTTLSF   +LLL+ LL     CIADEYISI+DDWDE         ARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYKQAFKDFREAQEYGIGLGSVYLAKMYLEGKGVKVDYKKAQLYAKNAI  112
            FENGLDHFNQGQY+QAFKDF+ AQEY+IGLGSVYLAKMYLEGKGVKVDYKKAQ+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KgygsgllggtlilgRMQAEGLGMKKDLKQALKTYRHVVRMfsnkstn-ftnnfRLPNLA  171
            KGYGSGLLGG+L+LGRMQA+GLGMKKDLKQ LKTYRHVVRMFSNKSTN F+NNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  EFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKALQIKDNTLSWEDIAEISSNIILLKQ  231
             FTSMLIGSRFIDLSGLSANPIKFGKKFGILV K+ QIKD+TL WEDIAEISSNIILLKQ
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQ  238

Query  232  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  276
            QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL
Sbjct  239  QMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

33) MWE_1004 in NC_017926


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  307 bits (1149),  Expect = 6e-85, Method: Compositional matrix adjust.
 Identities = 228/284 (81%), Positives = 247/284 (87%), Gaps = 10/284 (3%)

Query  1    MFKDFYHTTfsflkpllfllglllpfslCIADGYISIS--------PTWDEYTQKYKTYY  52
            MFKDFY+TT+SF   LL+L+ LL     CIAD YISIS          WDE +++ KTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDNFNQGQYQQAFKNFRKAQEYGIGLGSVYLAKMYLEGKGVKVDYKKAQLYAKNAI  112
            FENGLD+FNQGQYQQAFK+F+ AQEY+IGLGSVYLAKMYLEGKGVKVDYKKAQ+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KRYGSGMLGGALILGRMQAEGLGMKKDLKQALKTYRSVVRIFSNKSTN-FVNKFGSNLAE  171
            K YGSG+LGGAL+LGRMQA+GLGMKKDLKQ LKTYR VVR+FSNKSTN F N+F      
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVNKSSQIKDKTLLWEDIAEISSNITLLKQQ  231
            FTSMLIGSRFIDLSGLSANPIKFGKKFGILV KS+QIKDKTLLWEDIAEISSNI LLKQQ
Sbjct  180  FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQ  239

Query  232  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSIEFGYEKAMEAL  275
            MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKS EFGYEKAMEAL
Sbjct  240  MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

34) HPPN120_02515 in NC_017378


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  287 bits (1073),  Expect = 6e-79, Method: Compositional matrix adjust.
 Identities = 216/261 (83%), Positives = 241/261 (93%), Gaps = 2/261 (0%)

Query  2    PFSLCIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYKQAFKDFKLAQ  61
            PFSLCIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQY+QAFKDFKLAQ
Sbjct  24   PFSLCIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQ  83

Query  62   EYSIGLGNVYLAKMYLEGKGVKVDYKKAQLYAKNAIKgygsgllggalilgRMQAEGLGM  121
            EYSIGLG+VYLAKMYLEGKGVKVDYKKAQ+YA+NAIKGYGSGLLGGAL+LGRMQA+GLGM
Sbjct  84   EYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGM  143

Query  122  KKDLKQALNTYRQALRVFSNKGIN-FHNNFRLPDLTEMTGMLIGARFIDLSGLSANPIKF  180
            KKDLKQ L+TYR+ +R+FSNK+ N F NNFRLP+L+  T+MLIG+RFIDLSGLSANPIKF
Sbjct  144  KKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA-FTSMLIGSRFIDLSGLSANPIKF  202

Query  181  EKQFANMVEFVSGIKNEPIAPYDAAEISSNIILLKQQMGEILYRIGIAYqkglgtkkkke  240
             K+F+ +V   + IK+  +   D AEISSNIILLKQQMGEILYRIGIAY+ GLGT+KKK+
Sbjct  203  GKKFGILVMKSTQIKDKTLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKD  262

Query  241  kakkflqkSAEFGYEKAMEAL  261
            +AKKFLQKSAEFGYEKAMEAL
Sbjct  263  RAKKFLQKSAEFGYEKAMEAL  283

35) Hac_0877 in NC_008229


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  277 bits (1035),  Expect = 6e-76, Method: Compositional matrix adjust.
 Identities = 231/287 (81%), Positives = 253/287 (89%), Gaps = 14/287 (4%)

Query  1    MFKDFYRTTlsflkplllllglllpfslCIADEYISI--------RDDWDKIARNHKTYY  52
            MFKDFYRTTLSF   LLLL+ LL     CIADEYISI        R++WD IARNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDHFNQGQYKQAFKDFREAQEYGIGLGNVYLAKMYLEGKGVKVDYKKAQLYAKNAI  112
            FENGLDHFNQGQY+QAFKDF+ AQEY+IGLG+VYLAKMYLEGKGVKVDYKKAQ+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KGYGSGFLGGALILGHMQTEGLGMKKDLKQALKTYRHVVRIFSNKSTN-FANNFR-PNLA  170
            KGYGSG+LGGAL+LG+MQ++GLGMKKDLKQ LKTYRHVVR+FSNKSTN FANNFR PNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  171  EFTSMLIGTRFIDLSGLSANPEKFGKKFGRLTSLAIQAGIPHKTPSWEDIAEISNNIILL  230
             FTSMLIG+RFIDLSGLSANP KFGKKFG L   + Q  I +KT  WEDIAEIS+NIILL
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQ--IKDKTLLWEDIAEISSNIILL  236

Query  231  KQQMGEILYRIGIAYKEGLGTkkkknkakkflqkSAEFGYEKAMEAL  277
            KQQMGEILYRIGIAYKEGLGT+KKK++AKKFLQKSAEFGYEKAMEAL
Sbjct  237  KQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

36) HMPREF0462_0902 in NC_017375


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  262 bits (979),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 207/287 (73%), Positives = 239/287 (84%), Gaps = 18/287 (6%)

Query  10   MFKDFYRTTfsflkpllfllglllpfslCIADGYISIN--------PTWDEYTQKYKTYY  61
            MFKDFYRTT+SF   LL+L+ LL     CIAD YISI+          WDE +++ KTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  62   FENGLDNFNKGQYKQAFKDFRKAQEYGIGLGSVYLAKMYLEGKGVKVDYKKAQLYAKNAI  121
            FENGLD+FN+GQY+QAFKDF+ AQEY+IGLGSVYLAKMYLEGKGVKVDYKKAQ+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  122  KGYGSGMLGGALILGYMQTEGLGMKKDLKQVLNTYRHVVRILSNKGIN-FHNNFRLPNLA  180
            KGYGSG+LGGAL+LG MQ++GLGMKKDLKQVL+TYRHVVR++SNK+ N F NNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  QTIGIAIGLRFIDLSGLSANPKKFGKKFEKLEDFNTYIHANSEVPNAPSL-EDIAEISSN  239
             T ++ IG RFIDLSGLSANP KFGKKF  L      +  ++++ +   L EDIAEISSN
Sbjct  180  FT-SMLIGSRFIDLSGLSANPIKFGKKFGIL------VMKSTQIKDKTLLWEDIAEISSN  232

Query  240  IILLKQQMGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSTEFGYEKA  286
            IILLKQQMGEILYRIGIAYKEGLGTRK+K RAKKFLQKS+EFGYEKA
Sbjct  233  IILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

37) HMPREF4655_21086 in NC_017360


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  262 bits (980),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 204/290 (71%), Positives = 236/290 (82%), Gaps = 16/290 (5%)

Query  10   MFKDFYRTTfsllkplllllglllpfslCIADGYVSIS--------PTWDEYTQNYKTYY  61
            MFKDFYRTT+S+   LLLL+ LL     CIAD Y+SIS          WDE ++N KTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  62   FENGLDNFNKGQYKQAFKNFRKAQEYGIGLGSVYLAKMYLEGKGVKVDYKKAQLYAKNAI  121
            FENGLD+FN+GQY+QAFK+F+ AQEY+IGLGSVYLAKMYLEGKGVKVDYKKAQ+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  122  KRYGSGMLGGALILGYMQAEGLGMKKDLKQALNTYRHVVRILSNKGIN-FHNTFRLLDLA  180
            K YGSG+LGGAL+LG MQA+GLGMKKDLKQ L+TYRHVVR++SNK+ N F N FRL +LA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  181  QVAGIAIGARFIDLSGLSANPKKFGKKFEKLEDFKYFLHSNGEVPDALSLAEIAEISSNI  240
              +++ IG+RFIDLSGLSANP KFGKKF  L      + S      +L   +IAEISSNI
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILV-----MKSTQIKDKTLLWEDIAEISSNI  233

Query  241  ILLKQQMGEILYRIGIAYQEGLGTRKQKSRAKKFLQKSTEFGYEKAMEAL  290
            ILLKQQMGEILYRIGIAY+EGLGTRK+K RAKKFLQKS+EFGYEKAMEAL
Sbjct  234  ILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

38) HPF16_0835 in NC_017368


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  260 bits (972),  Expect = 6e-71, Method: Compositional matrix adjust.
 Identities = 208/290 (72%), Positives = 236/290 (82%), Gaps = 16/290 (5%)

Query  1    MFKDFYRTTfsflkplllllglllpfslCIADGYVSIS--------PTWDEYTQNYKTYY  52
            MFKDFYRTT+SF   LLLL+ LL     CIAD Y+SIS          WDE ++N KTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDNFNKDQYKQAFKNFRKAQEYGIGLGSVYLAKMYLEGKGVKVDYKKAQLYAKNAI  112
            FENGLD+FN++QY+QAFK+F+ AQEY+IGLGSVYLAKMYLEGKGVKVDYKKAQ+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KRYGSGMLGGALILGYMQAQGLGMKKDLKQALNTYRHVVRILSNKGIN-FHNTFRLLDLA  171
            K YGSG+LGGAL+LG MQAQGLGMKKDLKQ L+TYRHVVR++SNK+ N F N FRL +LA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  QATGIAIGVRFIDLSGLSTNPKKFGKKFEKLEDFKYFLHSNGEVPDALSVEDIAEISSNI  231
              T++ IG RFIDLSGLS+NP KFGKKF  L      + S      +L  EDIAEISSNI
Sbjct  180  -FTSMLIGSRFIDLSGLSANPIKFGKKFGILV-----MKSTQIKDKTLLWEDIAEISSNI  233

Query  232  ILLKQQMGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSTEFGYEKAMEAL  281
            ILLKQQMGEILYRIGIAYKEGLGTRK+K RAKKFLQKS+EFGYEKAMEAL
Sbjct  234  ILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

39) HPOK310_0809 in NC_020509


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  260 bits (970),  Expect = 9e-71, Method: Compositional matrix adjust.
 Identities = 205/290 (71%), Positives = 230/290 (80%), Gaps = 16/290 (5%)

Query  1    MFKDFYRTTfsflkpllfllglllpfslCIADGYISIN--------PTWDEYTRNHKTYY  52
            MFKDFYRTT+SF   LL+L+ LL     CIAD YISI+          WDE +RNHKTYY
Sbjct  1    MFKDFYRTTLSFNPLLLLLVLLLPFSL-CIADEYISISDDWDERARNQWDEIARNHKTYY  59

Query  53   FENGLDNFNKGQYKQAFKNFRKAQEYDIGLGSVYLAKMYLEGKGVKVDYKKAQLYAKNAI  112
            FENGLD+FN+GQY+QAFK+F+ AQEY IGLGSVYLAKMYLEGKGVKVDYKKAQ+YA+NAI
Sbjct  60   FENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAI  119

Query  113  KRYGSGMLGCTLILGRMQAEGLGMKKDLKQALKTYRRVVRRLSNKGIN-FHNNFRLPNLA  171
            K YGSG+LG +L+LGRMQA+GLGMKKDLKQ LKTYR+VVR +SNK+ N F NNFRLPNLA
Sbjct  120  KGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLA  179

Query  172  QTTGIAIGLQFIDLSGLSANPkkfgkkfekfedfkyfLHSNSEVPDALSWEDIAEISSNI  231
              T++ IG +FIDLSGLSANP                + S      +L WEDIAEISSNI
Sbjct  180  -FTSMLIGSRFIDLSGLSANP-----IKFGKKFGILVMKSTQIKDKTLLWEDIAEISSNI  233

Query  232  ILLKQQMGEILYRIGIAYKEGLGTRKQKSRAKKFLQKSVEFGYEKAMEAL  281
            ILLKQQMGEILYRIGIAYKEGLGTRK+K RAKKFLQKS EFGYEKAMEAL
Sbjct  234  ILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL  283

40) HPSA_02530 in NC_017361


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  246 bits (920),  Expect = 7e-67, Method: Compositional matrix adjust.
 Identities = 187/261 (72%), Positives = 214/261 (82%), Gaps = 20/261 (7%)

Query  29   CIADEHKYISISEDWDL--------YTRQYKTYYFENGLDNFNKGQYKQAFKDFREAQEY  80
            CIADE  YISIS+DWD          +R+ KTYYFENGLD+FN+GQY+QAFKDF+ AQEY
Sbjct  28   CIADE--YISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEY  85

Query  81   GIGLGSVYLAKMYLEGKGVKVDYKKAQLYAQNAIKGHGSGMLGGALILGYMQAQGLGMKK  140
            +IGLGSVYLAKMYLEGKGVKVDYKKAQ+YAQNAIKG GSG+LGGAL+LG MQAQGLGMKK
Sbjct  86   SIGLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKK  145

Query  141  DLKQALKTYTHVVRMLSNKGINVYNHTF----FGFA---IASQFIDLSGLSANPKEFGKQ  193
            DLKQ LKTY HVVRM+SNK+ N + + F    ++F+   I+S+FIDLSGLSANP  FGK+
Sbjct  146  DLKQVLKTYRHVVRMFSNKSTNYFANNFRLPNLAFTSMLIGSRFIDLSGLSANPIKFGKK  205

Query  194  FERLENLKKAIQDIGEININFVDIAEFSSNIILLKQQMGEILYRIGIVYKEGLGVRKQKS  253
            F  L  + K+ Q I +  +   DIAE+SSNIILLKQQMGEILYRIGI YKEGLG RK+K 
Sbjct  206  FGIL--VMKSTQ-IKDKTLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKD  262

Query  254  RAKKFLQKSAEFGYEKAMEAL  274
            RAKKFLQKSAEFGYEKAMEAL
Sbjct  263  RAKKFLQKSAEFGYEKAMEAL  283

41) HPSA20_0559 in NC_022130


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  231 bits (862),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 188/261 (73%), Positives = 219/261 (84%), Gaps = 20/261 (7%)

Query  29   CIADEYISISDDWDL--------FTRQYKTYYFENGLDNFNKGQYKQAFKDFKTAEEYGI  80
            CIADEYISISDDWD         ++R+ KTYYFENGLD+FN+GQY+QAFKDFK A+EY+I
Sbjct  28   CIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSI  87

Query  81   GLGSVYLAKMYLEGKGVKVDYKKAQLYAQNAIKGYGSGMLGGVLILGYMQAQGLGMKKDL  140
            GLGSVYLAKMYLEGKGVKVDYKKAQ+YAQNAIKGYGSG+LGG L+LG MQAQGLGMKKDL
Sbjct  88   GLGSVYLAKMYLEGKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDL  147

Query  141  KQALKTYKHVVRMLSNKGVNVYNH----TVFGFA---IASQFIDLSGLSANPKRFGKQFE  193
            KQ LKTY+HVVRM+SNK+ N + +      ++F+   I+S+FIDLSGLSANP +FGK+F 
Sbjct  148  KQVLKTYRHVVRMFSNKSTNYFANNFRLPNLAFTSMLIGSRFIDLSGLSANPIKFGKKFG  207

Query  194  RLENLKSSLQGNGEIHNMTSYEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRkkke  253
             L    + ++++  +      EDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKK+
Sbjct  208  ILVMKSTQIKDKTLL-----WEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKD  262

Query  254  kakkflqkSAEFGYEKAMEAL  274
            +AKKFLQKSAEFGYEKAMEAL
Sbjct  263  RAKKFLQKSAEFGYEKAMEAL  283

42) HPSH112_04455 in NC_017741


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  217 bits (809),  Expect = 5e-58, Method: Compositional matrix adjust.
 Identities = 174/244 (72%), Positives = 212/244 (87%), Gaps = 2/244 (0%)

Query  34   DCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEYGIGLGSVYLAKMYLE  93
            D R    WD+ A++ KT +   GL+++N GQY+QAF+ F+ AQEY+IGLGSVYLAKMYLE
Sbjct  41   DERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLE  100

Query  94   GKGVKADYKKVQLYAKNAIKgygsgllggalilgRMQAEGLGMKKDLKQALNTYRQVLRV  153
            GKGVK DYKK Q+YA+NAIKGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ L+TYR+V+R+
Sbjct  101  GKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRM  160

Query  154  FSNKGIN-FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVSGIKNE  212
            FSNK+ N F NNFRLP+L+  T+MLIG+RFIDLS+L+ANPIKF K+F+ +V   + IK+ 
Sbjct  161  FSNKSTNYFANNFRLPNLA-FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDK  219

Query  213  PIVPYDVAEISSNIILLKQQMGEILYRIGIAYQEGLGTkkkkekakkflqkSAEFGYEKA  272
             ++  D+AEISSNIILLKQQMGEILYRIGIAY+EGLGT+KKK++AKKFLQKSAEFGYEKA
Sbjct  220  TLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

Query  273  MEAL  276
            MEAL
Sbjct  280  MEAL  283

43) HPCU_02830 in NC_017358


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  217 bits (807),  Expect = 7e-58, Method: Compositional matrix adjust.
 Identities = 173/244 (71%), Positives = 211/244 (87%), Gaps = 2/244 (0%)

Query  34   DCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWVQEYGIGLGSVYLAKMYLE  93
            D R    WD+ A++ KT +   GL+++N GQY+QAF+ F+  QEY+IGLGSVYLAKMYLE
Sbjct  41   DERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLE  100

Query  94   GKGVKADYKKVQLYAKNAIKgygsgllggalilgRMQAEGLGMKKDLKQALNTYRQVLRV  153
            GKGVK DYKK Q+YA+NAIKGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ L+TYR+V+R+
Sbjct  101  GKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRM  160

Query  154  FSNKGIN-FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVSGIKNE  212
            FSNK+ N F NNFRLP+L+  T+MLIG+RFIDLS+L+ANPIKF K+F+ +V   + IK+ 
Sbjct  161  FSNKSTNYFANNFRLPNLA-FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDK  219

Query  213  PIVPYDVAEISSNIILLKQQMGEILYRIGIAYQEGLGTkkkkekakkflqkSAEFGYEKA  272
             ++  D+AEISSNIILLKQQMGEILYRIGIAY+EGLGT+KKK++AKKFLQKSAEFGYEKA
Sbjct  220  TLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

Query  273  MEAL  276
            MEAL
Sbjct  280  MEAL  283

44) HCD_06400 in NC_017735


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  215 bits (799),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 143/246 (59%), Positives = 195/246 (80%), Gaps = 12/246 (4%)

Query  2    NALKEELKTQEENLAKKHA---LKHGLENFNKGQYEQALKDFKTAQEIGIGLGSAYLAKM  58
            +   E  + Q +++A++H    + +GL++FN+GQY+QA+KDFK AQE +IGLGS YLAKM
Sbjct  38   DDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKM  97

Query  59   YLEGKGVKVDYKKAQIYAQNAIKEHGSGMLGGVLILGQMQAEGLGMKKDLKKALNNYRQV  118
            YLEGKGVKVDYKKAQ+YAQNAIK  GSG+LGG L+LG+MQA+GLGMKKDLK+ L+ YR+V
Sbjct  98   YLEGKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHV  157

Query  119  VLALANKGTKGLT-----SGAGLIGGLVGSKIIDLSGLNGNPEDFKTKFSTYLAKT----  169
            V  ++NK+T+ ++     +  ++ + L+GS++IDLSGL++NP  F  KF+  + K+    
Sbjct  158  VRMFSNKSTNYFANNFRLPNLAFTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIK  217

Query  170  DKVMNFNDSGEVMNNINLLRQEMGEILYRIGIAYKEGLGTKKKESQAKKFLQKATEFGYE  229
            DK +  +D +E+ +NI LL+Q+MGEILYRIGIAYKEGLGT+KK  +AKKFLQK++EFGYE
Sbjct  218  DKTLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYE  277

Query  230  KAMEAL  235
            KAMEAL
Sbjct  278  KAMEAL  283

45) HPSH417_02470 in NC_017739


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  214 bits (796),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 175/244 (72%), Positives = 212/244 (87%), Gaps = 2/244 (0%)

Query  34   DCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEHGIGLGSVYLAKMYLE  93
            D R    WD+ A++ KT +   GL+++N GQY+QAF+ F+ AQE +IGLGSVYLAKMYLE
Sbjct  41   DERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLE  100

Query  94   GKGVKRDYKKAQLYAKNAIKgygsgllggalilgRMQAEGLGMKKDLKQALNTYRQVLRV  153
            GKGVK DYKKAQ+YA+NAIKGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ L+TYR+V+R+
Sbjct  101  GKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRM  160

Query  154  FSNKGIN-FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVSGIKNE  212
            FSNK+ N F NNFRLP+L+  T+MLIG+RFIDLS+L+ANPIKF K+F+ +V   + IK+ 
Sbjct  161  FSNKSTNYFANNFRLPNLA-FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDK  219

Query  213  PIVPYDIAEISSNIILLKQQMGEILYRIGIAYQEGLGTkkkkekakkflqkSAEFGYEKA  272
             ++  DIAEISSNIILLKQQMGEILYRIGIAY+EGLGT+KKK++AKKFLQKSAEFGYEKA
Sbjct  220  TLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

Query  273  MEAL  276
            MEAL
Sbjct  280  MEAL  283

46) HPSH169_02660 in NC_017740


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  213 bits (792),  Expect = 1e-56, Method: Compositional matrix adjust.
 Identities = 174/244 (72%), Positives = 212/244 (87%), Gaps = 2/244 (0%)

Query  34   DCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEYGIGLGSVYLAKMYLE  93
            D R    WD+ A++ KT +   GL+++N GQY+QAF+ F+ AQEY+IGLGSVYLAKMYLE
Sbjct  41   DERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLE  100

Query  94   GKGVKRDYKKAQLYAKNAIKgygsgllggalilgRMQAEGLGMKKDLKQALNTYRQVLRV  153
            GKGVK DYKKAQ+YA+NAIKGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ L+TYR+V+R+
Sbjct  101  GKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRM  160

Query  154  FSNKGIN-FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVFGIKNE  212
            FSNK+ N F NNFRLP+L+  T+MLIG+RFIDLS+L+ANPIKF K+F+ +V     IK+ 
Sbjct  161  FSNKSTNYFANNFRLPNLA-FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDK  219

Query  213  PIVPYDVAEISSNIILLKQQIGEILYRIGIAYQEGLGTkkkkekakkflqkSAEFGYEKA  272
             ++  D+AEISSNIILLKQQ+GEILYRIGIAY+EGLGT+KKK++AKKFLQKSAEFGYEKA
Sbjct  220  TLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

Query  273  MEAL  276
            MEAL
Sbjct  280  MEAL  283

47) HPAKL86_03920 in NC_019563


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  212 bits (787),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 169/244 (70%), Positives = 213/244 (88%), Gaps = 2/244 (0%)

Query  34   DCRITCVWDEYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEHGIGLGSVYLAKMYLE  93
            D R    WDE A++ KT +   GL+++N GQY+QAF+ F+ AQE +IGLGSVYLAKMYLE
Sbjct  41   DERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLE  100

Query  94   GKGVKMDYKKAQLYAKNAIKgygsgllggalilgRMQAEGLGMKKDLKQALNTYRQALRV  153
            GKGVK+DYKKAQ+YA+NAIKGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ L+TYR+ +R+
Sbjct  101  GKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRM  160

Query  154  FSNKGTKFY-DNFRLPDLTEMTGMLIGARFIDLSSLSANPIKFEKQFAKMMEFVSDIKNE  212
            FSNK+T+++ +NFRLP+L+  T+MLIG+RFIDLS+LSANPIKF K+F+ ++   ++IK+ 
Sbjct  161  FSNKSTNYFANNFRLPNLA-FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDK  219

Query  213  PIVPYDAAEISNNIILLKQQMGEILYKIGIAYQEGLGTkkkkekakkflqkSAEFGYEKA  272
             ++  D AEIS+NIILLKQQMGEILY+IGIAY+EGLGT+KKK++AKKFLQKSAEFGYEKA
Sbjct  220  TLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

Query  273  MEDL  276
            ME L
Sbjct  280  MEAL  283

48) HPSAT_04180 in NC_017359


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  212 bits (787),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 174/244 (72%), Positives = 210/244 (87%), Gaps = 2/244 (0%)

Query  34   DCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEYGIGLGSVYLAKMYLE  93
            D R    WD+ A++ KT +   GL+++N GQY+QAF+ F+ AQEY+IGLGSVYLAKMYLE
Sbjct  41   DERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLE  100

Query  94   GKGVKRDYKKAQLYAKNAIKgygsgllggalilgRMQAEGLGMKKDLKQALNTYRQALRV  153
            GKGVK DYKKAQ+YA+NAIKGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ L+TYR+ +R+
Sbjct  101  GKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRM  160

Query  154  FSNKGIN-FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVFGIKNE  212
            FSNK+ N F NNFRLP+L+  T+MLIG+RFIDLS+L+ANPIKF K+F+ +V     IK+ 
Sbjct  161  FSNKSTNYFANNFRLPNLA-FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDK  219

Query  213  PIVPYDAAEISSNIILLKQQMGEILYRIGIAYQEGLGTkkkkekakkflqkSAEFGYEKA  272
             ++  D AEISSNIILLKQQMGEILYRIGIAY+EGLGT+KKK++AKKFLQKSAEFGYEKA
Sbjct  220  TLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

Query  273  MEAL  276
            MEAL
Sbjct  280  MEAL  283

49) HPSH_04330 in NC_010698


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  210 bits (781),  Expect = 7e-56, Method: Compositional matrix adjust.
 Identities = 173/244 (71%), Positives = 210/244 (87%), Gaps = 2/244 (0%)

Query  34   DCRITCVWDQYAKEFKTNFCKFGLNNLNYGQYKQAFQFFRWAQEYGIGLGSVYLAKMYLE  93
            D R    WD+ A++ KT +   GL+++N GQY+QAF+ F+ AQEY+IGLGSVYLAKMYLE
Sbjct  41   DERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLE  100

Query  94   GKGVKRDYKKAQLYAKNAIKgygsgllggalilgRMQAEGLGMKKDLKQALNTYRQALRV  153
            GKGVK DYKKAQ+YA+NAIKGYGSGLLGGAL+LGRMQA+GLGMKKDLKQ L+TYR+ +R+
Sbjct  101  GKGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRM  160

Query  154  FSNKGIN-FHNNFRLPDLTEMTGMLIGARFIDLSSLNANPIKFEKQFANMVEFVFGIKNE  212
            FSNK+ N F NNFRLP+L+  T+MLIG+RFIDLS+L+ANPIKF K+F+ +V     IK+ 
Sbjct  161  FSNKSTNYFANNFRLPNLA-FTSMLIGSRFIDLSGLSANPIKFGKKFGILVMKSTQIKDK  219

Query  213  PIVPYDAAEISSNIILLKQQIGEILYRIGIAYQEGLGTkkkkekakkflqkSAEFGYEKA  272
             ++  D AEISSNIILLKQQ+GEILYRIGIAY+EGLGT+KKK++AKKFLQKSAEFGYEKA
Sbjct  220  TLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKA  279

Query  273  MEAL  276
            MEAL
Sbjct  280  MEAL  283

50) HPAKL86_02925 in NC_019563


> NC_014256_P1|31|G31|298736221|YP_003728747.1|Helicobacter_pylori_B8|+|32623..33474|-|HPB8_726|chitin 
synthase regulatory 
factor 3
Length=283

 Score =  189 bits (703),  Expect = 8e-50, Method: Compositional matrix adjust.
 Identities = 137/247 (56%), Positives = 194/247 (79%), Gaps = 18/247 (7%)

Query  6    EKSKIEKENVA---KMYAFRHGLENFNKGQYEQALKDFKAAQEIGIGLGNAYLAKMYLEG  62
            E+++ + +++A   K Y F +GL++FN+GQY+QA+KDFK AQE +IGLG+ YLAKMYLEG
Sbjct  42   ERARNQWDEIARNHKTYYFENGLDHFNQGQYQQAFKDFKLAQEYSIGLGSVYLAKMYLEG  101

Query  63   KGVEVDYKKAQIYAQNAIKERGSGILGGALVLGQMQAEGLGMKKNPKKALNTYRQVVLML  122
            KGV VDYKKAQ+YAQNAIK  GSG+LGGALVLG+MQA+GLGMKK+ K+ L+TYR+VV M+
Sbjct  102  KGVKVDYKKAQFYAQNAIKGYGSGLLGGALVLGRMQAQGLGMKKDLKQVLKTYRHVVRMF  161

Query  123  ANKGLP--SGGLENLKFGLVNDLVSSFGGQAIDLSGLNANSDDFKQRFTTHFFMVGKTGV  180
            +NK+    +  +   ++++ + L+   G++ IDLSGL+AN+  F ++F    +++  T +
Sbjct  162  SNKSTNYFANNFRLPNLAFTSMLI---GSRFIDLSGLSANPIKFGKKFGI--LVMKSTQI  216

Query  181  D-----W---LQLSNHIIVLKQEMGEILYRIGIAYKEGLGVRKQKNKAQKFLQKATEFGY  232
                  W    ++S++II+LKQ+MGEILYRIGIAYKEGLG RK+K++A+KFLQK++EFGY
Sbjct  217  KDKTLLWEDIAEISSNIILLKQQMGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGY  276

Query  233  EKAMEAM  239
            EKAMEA+
Sbjct  277  EKAMEAL  283