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Homologs of virB2-1 gene of NC_011498_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) virB2-1
( YP_002301103.1 )

VirB2 type IV secretion protein

NC_011498
(Helicobacter pylori P12)

2e-42

100

2) HP0443
( NP_207241.1 )

hypothetical protein

NC_000915
(Helicobacter pylori 26695)

3e-42

3) C694_02250
( YP_006934365.1 )

hypothetical protein

NC_018939
(Helicobacter pylori 26695)

3e-42

4) C695_02250
( YP_006892930.1 )

hypothetical protein

NC_018937
(Helicobacter pylori Rif1)

3e-42

5) C730_02250
( YP_006935971.1 )

hypothetical protein

NC_018938
(Helicobacter pylori Rif2)

3e-42

6) virB2-1
( YP_005776819.1 )

VirB2 type IV secretion protein

NC_017367
(Helicobacter pylori F57)

3e-41

7) K747_09070
( YP_007978724.1 )

virB2 type IV secretion protein

NC_021215
(Helicobacter pylori UM032)

5e-41

8) K748_03705
( YP_008336643.1 )

virB2 type IV secretion protein

NC_021882
(Helicobacter pylori UM298)

5e-41

9) K749_05295
( YP_007980831.1 )

virB2 type IV secretion protein

NC_021216
(Helicobacter pylori UM299)

5e-41

10) HPSA_07555
( YP_005772065.1 )

hypothetical protein

NC_017361
(Helicobacter pylori SouthAfrica7)

1e-40

11) HPPC_07685
( YP_003927791.1 )

hypothetical protein

NC_014555
(Helicobacter pylori PeCan4)

1e-35

12) MWE_0135
( YP_006337798.1 )

hypothetical protein

NC_017926
(Helicobacter pylori XZ274)

4e-31

13) HMPREF4655_20322
( YP_005769461.1 )

hypothetical protein

NC_017360
(Helicobacter pylori 35A)

9e-30

14) virB2-1
( YP_005774953.1 )

VirB2 type IV secretion protein

NC_017365
(Helicobacter pylori F30)

1e-27

15) HCBAA847_2053
( YP_007601902.1 )

hypothetical protein

NC_020555
(Helicobacter cinaedi ATCC BAA-847)

8e-04

• Sequence Alignments

1) virB2-1 in NC_011498


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  165 bits (609),  Expect = 2e-42, Method: Compositional matrix adjust.
 Identities = 100/100 (100%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60
           MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

2) C694_02250 in NC_018939


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIVG  60
           MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIG+LIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

3) HP0443 in NC_000915


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIVG  60
           MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIG+LIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

4) C695_02250 in NC_018937


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIVG  60
           MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIG+LIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

5) C730_02250 in NC_018938


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  164 bits (607),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 99/100 (99%), Positives = 100/100 (100%), Gaps = 0/100 (0%)

Query  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIVG  60
           MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIG+LIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

6) virB2-1 in NC_017367


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  161 bits (595),  Expect = 3e-41, Method: Compositional matrix adjust.
 Identities = 95/100 (95%), Positives = 98/100 (98%), Gaps = 0/100 (0%)

Query  1   MKIKHKGIRMFKQIRRMMSLAMLMPSFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIIG  60
           MK KHKGIRMFKQIRRMMSLA+LMPSFLLAAPDYKQKFTQILDFISNDFIKAIG+LII+G
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRLGEIGWKCVGIIIITADISNAKTLSQWLF  100
           TCIYAYKNWDRLGEIGWKCVGIIIITA ISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

7) K747_09070 in NC_021215


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  160 bits (592),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 96/100 (96%), Positives = 99/100 (99%), Gaps = 0/100 (0%)

Query  1   MKIKHKGIRMFKQIRRMMSLAMLMPSFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIVG  60
           MK KHKGIRMFKQIRRMMSLA+LMPSFLLAAPDYKQKFTQILDFISNDFIKAIG+LIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRFGEIGWKCVGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDR+GEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

8) K748_03705 in NC_021882


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  160 bits (592),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 96/100 (96%), Positives = 99/100 (99%), Gaps = 0/100 (0%)

Query  1   MKIKHKGIRMFKQIRRMMSLAMLMPSFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIVG  60
           MK KHKGIRMFKQIRRMMSLA+LMPSFLLAAPDYKQKFTQILDFISNDFIKAIG+LIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRFGEIGWKCVGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDR+GEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

9) K749_05295 in NC_021216


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  160 bits (592),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 96/100 (96%), Positives = 99/100 (99%), Gaps = 0/100 (0%)

Query  1   MKIKHKGIRMFKQIRRMMSLAMLMPSFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIVG  60
           MK KHKGIRMFKQIRRMMSLA+LMPSFLLAAPDYKQKFTQILDFISNDFIKAIG+LIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRFGEIGWKCVGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDR+GEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

10) HPSA_07555 in NC_017361


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  159 bits (587),  Expect = 1e-40, Method: Compositional matrix adjust.
 Identities = 93/100 (93%), Positives = 98/100 (98%), Gaps = 0/100 (0%)

Query  1   MKTKHKEIRMFKKVRRMMSLAMLMPSFLLAAPDYRQKFTQILDFISNDFIKAIGGLIIVG  60
           MKTKHK IRMFK++RRMMSLA+LMPSFLLAAPDY+QKFTQILDFISNDFIKAIG+LIIVG
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRLGEIGWKCAGIIIITAAISNAKTLSQWLF  100
           TCIYAYKNWDRLGEIGWKC GIIIITAAISNAKTLSQWLF
Sbjct  61  TCIYAYKNWDRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

11) HPPC_07685 in NC_014555


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  142 bits (524),  Expect = 1e-35, Method: Compositional matrix adjust.
 Identities = 85/91 (94%), Positives = 90/91 (99%), Gaps = 0/91 (0%)

Query  1   MFKKVCRMMSLAMLMPNFLLAAPDYKQKFTQILDFISNDFIKAIGGLIIVGTCIYAYKNW  60
           MFK++ RMMSLA+LMP+FLLAAPDYKQKFTQILDFISNDFIKAIG+LIIVGTCIYAYKNW
Sbjct  10  MFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVGTCIYAYKNW  69

Query  61  DRLGEIGWKCVGIIIITAAISNAKTLSQWLF  91
           DRLGEIGWKCVGIIIITAAISNAKTLSQWLF
Sbjct  70  DRLGEIGWKCVGIIIITAAISNAKTLSQWLF  100

12) MWE_0135 in NC_017926


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 76/79 (97%), Positives = 79/79 (100%), Gaps = 0/79 (0%)

Query  1   MLMPSFLLAAPDYKQKFTQILDFISNDFMKAIGGLIIVGTCIYAYKNWDRLGEIGWKCVG  60
           +LMPSFLLAAPDYKQKFTQILDFISNDF+KAIG+LIIVGTCIYAYKNWDRLGEIGWKCVG
Sbjct  22  ILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVGTCIYAYKNWDRLGEIGWKCVG  81

Query  61  IIIITAAISNAKTLSQWLF  79
           IIIITAAISNAKTLSQWLF
Sbjct  82  IIIITAAISNAKTLSQWLF  100

13) HMPREF4655_20322 in NC_017360


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  123 bits (449),  Expect = 9e-30, Method: Compositional matrix adjust.
 Identities = 69/76 (91%), Positives = 74/76 (98%), Gaps = 0/76 (0%)

Query  1   MKIKHKGIRMFKQIRRVMSLAMLMPSFLLAESDYKQKFTQILDFISNDFIKAIGGLIIIG  60
           MK KHKGIRMFKQIRR+MSLA+LMPSFLLA +DYKQKFTQILDFISNDFIKAIG+LII+G
Sbjct  1   MKTKHKGIRMFKQIRRMMSLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVG  60

Query  61  TCIYAYKNWDRLGEIG  76
           TCIYAYKNWDRLGEIG
Sbjct  61  TCIYAYKNWDRLGEIG  76

14) virB2-1 in NC_017365


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 69/72 (96%), Positives = 71/72 (99%), Gaps = 0/72 (0%)

Query  1   MVAPDYKQKFTQILDFISNDFIKAIGGLIIVGTCIYAYKNWDRLGEIGWKCVGIIIITAA  60
           + APDYKQKFTQILDFISNDFIKAIG+LIIVGTCIYAYKNWDRLGEIGWKCVGIIIITAA
Sbjct  29  LAAPDYKQKFTQILDFISNDFIKAIGSLIIVGTCIYAYKNWDRLGEIGWKCVGIIIITAA  88

Query  61  ISNAKTLSQWLF  72
           ISNAKTLSQWLF
Sbjct  89  ISNAKTLSQWLF  100

15) HCBAA847_2053 in NC_020555


> NC_011498_P1|31|G31|210134664|YP_002301103.1|Helicobacter_pylori_P12|-|37367..37669|virB2-1|HPP12_0469|VirB2 
type IV secretion 
protein
Length=100

 Score = 37.2 bits (121),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 34/82 (42%), Positives = 51/82 (63%), Gaps = 2/82 (2%)

Query  23   AISMLLPEVALCA-DLNSMVTKIFSWVKTALV-AIGTLIIIAVGIYFLKNLERWKEIFVQ  80
            ++++L+P   L A D +   T+I+  +   ++ AIG+LII++  IY  KN +R  EI  +
Sbjct  19   SLAILMPSFLLAAPDYKQKFTQILDFISNDFIKAIGSLIIVGTCIYAYKNWDRLGEIGWK  78

Query  81   CVGIIAATLLIMNADTISQWAF  102
            CVGII  T  I NA T+SQW F
Sbjct  79   CVGIIIITAAISNAKTLSQWLF  100