Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
VirB2 type IV secretion protein |
NC_011498 (Helicobacter pylori P12) |
2e-42 |
100 |
|
hypothetical protein |
NC_000915 (Helicobacter pylori 26695) |
3e-42 |
99 |
|
hypothetical protein |
NC_018939 (Helicobacter pylori 26695) |
3e-42 |
99 |
|
hypothetical protein |
NC_018937 (Helicobacter pylori Rif1) |
3e-42 |
99 |
|
hypothetical protein |
NC_018938 (Helicobacter pylori Rif2) |
3e-42 |
99 |
|
VirB2 type IV secretion protein |
NC_017367 (Helicobacter pylori F57) |
3e-41 |
95 |
|
virB2 type IV secretion protein |
NC_021215 (Helicobacter pylori UM032) |
5e-41 |
96 |
|
virB2 type IV secretion protein |
NC_021882 (Helicobacter pylori UM298) |
5e-41 |
96 |
|
virB2 type IV secretion protein |
NC_021216 (Helicobacter pylori UM299) |
5e-41 |
96 |
|
hypothetical protein |
NC_017361 (Helicobacter pylori SouthAfrica7) |
1e-40 |
93 |
|
hypothetical protein |
NC_014555 (Helicobacter pylori PeCan4) |
1e-35 |
94 |
|
hypothetical protein |
NC_017926 (Helicobacter pylori XZ274) |
4e-31 |
97 |
|
hypothetical protein |
NC_017360 (Helicobacter pylori 35A) |
9e-30 |
91 |
|
VirB2 type IV secretion protein |
NC_017365 (Helicobacter pylori F30) |
1e-27 |
96 |
|
hypothetical protein |
NC_020555 (Helicobacter cinaedi ATCC BAA-847) |
8e-04 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_011498_P1' AND ph.id_pai_orf='31' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc