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Homologs of spaP gene of NC_004631_P2

163

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) spaP
( NP_457284.1 )

secretory protein (associated with virulence)

NC_003198
(Salmonella enterica CT18)

1e-85

100

2) STBHUCCB_29360
( YP_005218436.1 )

Surface presentation of antigens protein spaP

NC_016832
(Salmonella enterica P-stx-12)

1e-85

100

3) spaP
( NP_806493.1 )

surface presentation of antigens protein SpaP

NC_004631
(Salmonella enterica Ty2)

1e-85

100

4) spaP
( YP_007927063.1 )

surface presentation of antigens protein SpaP

NC_021176
(Salmonella enterica Ty21a)

1e-85

100

5) SE451236_20545
( YP_008267096.1 )

type III secretion system protein

NC_021820
(Salmonella enterica 08-1736)

1e-85

6) spaP
( YP_005238999.1 )

surface presentation of antigens protein SpaP

NC_016856
(Salmonella enterica 14028S)

1e-85

7) spaP
( YP_002227634.1 )

surface presentation of antigens protein SpaP

NC_011274
(Salmonella enterica 287/91)

1e-85

8) SBOV29161
( YP_008506738.1 )

hypothetical protein

NC_022241
(Salmonella enterica 3114)

1e-85

9) spaP
( YP_008248698.1 )

type III secretion system protein SpaP

NC_021810
(Salmonella enterica 41578)

1e-85

10) spaP
( YP_005398253.1 )

type III secretion system secretory apparatus

NC_017046
(Salmonella enterica 798)

1e-85

11) SU5_03371
( YP_006088978.1 )

Type III secretion inner membrane protein

NC_017623
(Salmonella enterica B182)

1e-85

12) spaP
( YP_008482453.1 )

secretory protein

NC_022221
(Salmonella enterica CDC1983-67)

1e-85

13) SEEB0189_05720
( YP_008307495.1 )

type III secretion system protein

NC_021844
(Salmonella enterica CFSAN000189)

1e-85

14) CFSAN001921_02625
( YP_008253933.1 )

type III secretion system protein

NC_021814
(Salmonella enterica CFSAN001921)

1e-85

15) spaP
( YP_007473531.1 )

type III secretion system protein SpaP

NC_020307
(Salmonella enterica CFSAN001992)

1e-85

16) CFSAN002050_20750
( YP_008262021.1 )

type III secretion system protein

NC_021818
(Salmonella enterica CFSAN002050)

1e-85

17) CFSAN002069_17820
( YP_008252324.1 )

type III secretion system protein

NC_021812
(Salmonella enterica CFSAN002069)

1e-85

18) spaP
( YP_002216859.1 )

surface presentation of antigens protein SpaP

NC_011205
(Salmonella enterica CT_02021853)

1e-85

19) spaP
( YP_002115842.1 )

surface presentation of antigens protein SpaP

NC_011094
(Salmonella enterica CVM19633)

1e-85

20) STMMW_28521
( YP_005233879.1 )

secretory protein (associated with virulence)

NC_016854
(Salmonella enterica D23580)

1e-85

21) spaP
( NP_461811.1 )

surface presentation of antigens protein SpaP

NC_003197
(Salmonella enterica LT2)

1e-85

22) spaP
( YP_002244803.1 )

surface presentation of antigens protein SpaP

NC_011294
(Salmonella enterica P125109)

1e-85

23) spaP
( YP_002638466.1 )

surface presentation of antigens protein SpaP

NC_012125
(Salmonella enterica RKS4594)

1e-85

24) spaP
( YP_005213998.1 )

secretory protein (associated with virulence)

NC_016831
(Salmonella enterica RKS5078)

1e-85

25) I137_13760
( YP_008382153.1 )

type III secretion system protein

NC_021984
(Salmonella enterica S06004)

1e-85

26) spaP
( YP_217809.1 )

surface presentation of antigens protein SpaP

NC_006905
(Salmonella enterica SC-B67)

1e-85

27) spaP
( YP_001589767.1 )

surface presentation of antigens protein SpaP

NC_010102
(Salmonella enterica SGSC4150; SPB7)

1e-85

28) spaP
( YP_005182758.1 )

type III secretion system secretory apparatus

NC_016810
(Salmonella enterica SL1344)

1e-85

29) spaP
( YP_002042131.1 )

surface presentation of antigens protein SpaP

NC_011080
(Salmonella enterica SL254)

1e-85

30) spaP
( YP_002046850.1 )

surface presentation of antigens protein SpaP

NC_011083
(Salmonella enterica SL476)

1e-85

31) spaP
( YP_002147787.1 )

surface presentation of antigens protein SpaP

NC_011149
(Salmonella enterica SL483)

1e-85

32) spaP
( YP_005243871.1 )

surface presentation of antigens protein SpaP

NC_016857
(Salmonella enterica ST4/74)

1e-85

33) spaP
( YP_005248635.1 )

surface presentation of antigens protein SpaP

NC_016860
(Salmonella enterica T000240)

1e-85

34) spaP
( YP_007904012.1 )

type III secretion system protein SpaP

NC_021151
(Salmonella enterica U288)

1e-85

35) spaP
( YP_005253379.1 )

surface presentation of antigens protein SpaP

NC_016863
(Salmonella enterica UK-1)

1e-85

36) SN31241_39820
( YP_008361897.1 )

Surface presentation of antigens protein spaP

NC_021902
(Salmonella enterica USMARC-S3124.1)

1e-85

37) spaP
( YP_001569178.1 )

surface presentation of antigens protein SpaP

NC_010067
(Salmonella enterica RSK2980)

2e-85

38) spaP
( YP_002143407.1 )

surface presentation of antigens protein SpaP

NC_011147
(Salmonella enterica AKU12601)

4e-85

39) spaP
( YP_151917.1 )

secretory protein (associated with virulence)

NC_006511
(Salmonella enterica ATCC 9150)

4e-85

40) A464_2914
( YP_008323508.1 )

Type III secretion inner membrane protein

NC_021870
(Salmonella bongori N268-08)

5e-85

41) spaP
( YP_004731330.1 )

virulence associated secretory protein

NC_015761
(Salmonella bongori NCTC 12419)

5e-85

42) spaP
( NP_902294.1 )

surface presentation of antigens protein SpaP

NC_005085
(Chromobacterium violaceum ATCC 12472)

2e-71

43) fliP
( YP_008112706.1 )

flagellar biosynthesis protein FliP

NC_021505
(Pseudomonas putida NBRC 14164)

6e-63

44) spaP
( YP_001908607.1 )

surface presentation of antigens protein SpaP

NC_010694
(Erwinia tasmaniensis Et1/99)

8e-60

45) spaP
( YP_002924278.1 )

surface presentation of antigens protein SpaP

NC_012751
(Candidatus Hamiltonella defensa T5A)

1e-59

46) spaP
( YP_454249.1 )

surface presentation of antigens protein SpaP

NC_007712
(Sodalis glossinidius morsitans)

1e-59

47) EAM_2659
( YP_003539726.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

7e-59

48) spaP1
( YP_003530143.1 )

surface presentation of antigens protein SpaP

NC_013961
(Erwinia amylovora CFBP1430)

7e-59

49) spaP
( YP_005819299.1 )

surface presentation of antigens protein SpaP

NC_017445
(Erwinia sp. Ejp617)

2e-58

50) spaP
( YP_002648994.1 )

surface presentation of antigens protein SpaP

NC_012214
(Erwinia pyrifoliae Ep1/96)

4e-58

51) spaP
( YP_006216510.1 )

type III secretion system protein SpaP

NC_017731
(Providencia stuartii MRSN 2154)

4e-58

52) spaP
( YP_001907833.1 )

surface presentation of antigens protein SpaP

NC_010694
(Erwinia tasmaniensis Et1/99)

1e-57

53) spaP
( YP_005802897.1 )

surface presentation of antigens protein SpaP

NC_017390
(Erwinia pyrifoliae DSM 12163)

1e-57

54) EAM_1565
( YP_003538647.1 )

type III secretion system protein

NC_013971
(Erwinia amylovora ATCC 49946)

1e-57

55) spaP3
( YP_003530944.1 )

surface presentation of antigens protein SpaP

NC_013961
(Erwinia amylovora CFBP1430)

5e-57

56) spaP
( YP_001883216.1 )

surface presentation of antigens protein SpaP

NC_010660
(Shigella boydii CDC 3083-94)

3e-56

57) spaP
( YP_406192.1 )

surface presentation of antigens protein SpaP

NC_007607
(Shigella dysenteriae Sd197)

3e-56

58) spaP
( YP_005712045.1 )

surface presentation of antigens protein SpaP

NC_017319
(Shigella flexneri 2002017)

2e-54

59) spaP
( NP_858286.1 )

surface presentation of antigens protein SpaP

NC_004851
(Shigella flexneri 301)

2e-54

60) spaP
( YP_313370.1 )

surface presentation of antigens protein SpaP

NC_007385
(Shigella sonnei Ss046)

2e-54

61) xsaW
( YP_003375994.1 )

xanthomonas secretion apparatus protein

NC_013722
(Xanthomonas albilineans GPE PC73)

7e-54

62) spaP
( YP_007030625.1 )

surface presentation of antigens protein

NC_019670
(Pseudomonas sp. UW4)

1e-51

63) ETEC_3055
( YP_006116602.1 )

type III secretion system protein

NC_017633
(Escherichia coli ETEC H10407)

1e-50

64) spaP
( YP_001459638.1 )

surface presentation of antigens protein SpaP

NC_009800
(Escherichia coli HS)

1e-50

65) spaP
( YP_005207205.1 )

protein SpaP

NC_016830
(Pseudomonas fluorescens F113)

3e-50

66) spaP
( YP_455764.1 )

surface presentation of antigens protein SpaP

NC_007712
(Sodalis glossinidius morsitans)

2e-49

67) spaP
( YP_001007698.1 )

surface presentation of antigens protein SpaP

NC_008800
(Yersinia enterocolitica 8081)

3e-49

68) spaP
( YP_002272331.1 )

surface presentation of antigens protein SpaP

NC_011353
(Escherichia coli EC4115)

1e-48

69) spaP
( NP_289422.1 )

surface presentation of antigens protein SpaP

NC_002655
(Escherichia coli EDL933)

1e-48

70) spaP
( NP_311752.1 )

surface presentation of antigens protein SpaP

NC_002695
(Escherichia coli Sakai)

1e-48

71) spaP
( YP_003079643.1 )

surface presentation of antigens protein SpaP

NC_013008
(Escherichia coli TW14359)

1e-48

72) spaP
( YP_006314345.1 )

surface presentation of antigens protein SpaP

NC_017906
(Escherichia coli Xuzhou21)

1e-48

73) epaP
( YP_006097359.1 )

type III secretion system protein

NC_017626
(Escherichia coli 042)

1e-47

74) ECO111_3598
( YP_003235942.1 )

type III secretion protein EpaP

NC_013364
(Escherichia coli 11128)

1e-47

75) spaP
( YP_003230868.1 )

surface presentation of antigens protein SpaP

NC_013361
(Escherichia coli 11368)

1e-47

76) ECO103_3430
( YP_003223303.1 )

type III secretion protein EpaP

NC_013353
(Escherichia coli 12009)

1e-47

77) spaP
( YP_001464197.1 )

surface presentation of antigens protein SpaP

NC_009801
(Escherichia coli E24377A)

1e-47

78) spaP
( YP_002388324.1 )

surface presentation of antigens protein SpaP

NC_011741
(Escherichia coli IAI1)

1e-47

79) EKO11_0869
( YP_005276581.1 )

Yop virulence translocation R

NC_016902
(Escherichia coli KO11FL)

1e-47

80) spaP
( YP_006164025.1 )

type III secretion system protein SpaP

NC_017660
(Escherichia coli KO11FL)

1e-47

81) LY180_14720
( YP_008566010.1 )

type III secretion system protein

NC_022364
(Escherichia coli LY180)

1e-47

82) spaP
( YP_002294401.1 )

surface presentation of antigens protein SpaP

NC_011415
(Escherichia coli SE11)

1e-47

83) spaP
( YP_002413881.1 )

surface presentation of antigens protein SpaP

NC_011751
(Escherichia coli UMN026)

1e-47

84) epaP
( YP_006125736.1 )

type III secretion system protein

NC_017635
(Escherichia coli W)

1e-47

85) spaP
( YP_006174476.1 )

type III secretion system protein SpaP

NC_017664
(Escherichia coli W)

1e-47

86) spaP
( YP_006145309.1 )

surface presentation of antigens protein SpaP

NC_017646
(Escherichia coli CE10)

5e-47

87) MU9_28
( YP_007503447.1 )

Type III secretion inner membrane protein

NC_020418
(Morganella morganii KT)

1e-46

88) spaP
( YP_001723845.1 )

surface presentation of antigens protein SpaP

NC_010468
(Escherichia coli ATCC 8739)

2e-46

89) spaP
( YP_006768713.1 )

type III secretion system protein SpaP

NC_018650
(Escherichia coli 2009EL-2050)

2e-44

90) spaP
( YP_006782820.1 )

type III secretion system protein SpaP

NC_018661
(Escherichia coli 2009EL-2071)

2e-44

91) spaP
( YP_006777750.1 )

type III secretion system protein SpaP

NC_018658
(Escherichia coli 2011C-3493)

2e-44

92) spaP
( YP_002404126.1 )

surface presentation of antigens protein SpaP

NC_011748
(Escherichia coli 55989)

2e-44

93) spaP
( YP_007382760.1 )

type III secretion system protein SpaP

NC_020163
(Escherichia coli APEC O78)

2e-44

94) spaP
( YP_008399203.1 )

surface presentation of antigens protein SpaP

NC_022000
(Proteus mirabilis BB2000)

7e-43

95) spaP
( YP_002152389.1 )

surface presentation of antigens protein SpaP

NC_010554
(Proteus mirabilis HI4320)

3e-42

96) escR
( YP_003232138.1 )

type III secretion system protein

NC_013361
(Escherichia coli 11368)

5e-34

97) escR
( YP_003223490.1 )

T3SS structure protein EscR

NC_013353
(Escherichia coli 12009)

5e-34

98) escR
( YP_003236103.1 )

T3SS structure protein EscR

NC_013364
(Escherichia coli 11128)

5e-34

99) escR
( YP_003501889.1 )

type III secretion system EscR protein

NC_013941
(Escherichia coli CB9615)

5e-34

100) escR
( YP_002331425.1 )

type III secretion system protein

NC_011601
(Escherichia coli E2348/69)

5e-34

101) epaP
( YP_002273179.1 )

type III secretion system protein

NC_011353
(Escherichia coli EC4115)

5e-34

102) escR
( NP_290283.1 )

type III secretion system protein

NC_002655
(Escherichia coli EDL933)

5e-34

103) ECO55CA74_21290
( YP_006161363.1 )

type III secretion system protein YscR

NC_017656
(Escherichia coli RM12579)

5e-34

104) ECs4583
( NP_312610.1 )

type III secretion system protein

NC_002695
(Escherichia coli Sakai)

5e-34

105) escR
( YP_003080495.1 )

type III secretion system protein

NC_013008
(Escherichia coli TW14359)

5e-34

106) CDCO157_4318
( YP_006315183.1 )

type III secretion system protein

NC_017906
(Escherichia coli Xuzhou21)

5e-34

107) escR
( YP_003366517.1 )

T3SS structural protein EscR

NC_013716
(Citrobacter rodentium ICC168)

3e-32

108) epaP
( YP_006169967.1 )

Type III secretion apparatus protein

NC_017663
(Escherichia coli P12b)

4e-32

109) YE105_C0338
( YP_004296539.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_015224
(Yersinia enterocolitica 105.5R(r))

4e-31

110) HCH_03263
( YP_434447.1 )

type III secretion system protein

NC_007645
(Hahella chejuensis KCTC 2396)

4e-31

111) Y11_35451
( YP_006007044.1 )

type III secretion inner membrane protein

NC_017564
(Yersinia enterocolitica Y11)

2e-30

112) fliP1
( NP_991819.2 )

type III secretion system protein

NC_005810
(Yersinia pestis 91001)

3e-30

113) A1122_03785
( YP_005520452.1 )

type III secretion system protein YscR

NC_017168
(Yersinia pestis A1122)

3e-30

114) epaP
( YP_001608228.1 )

type III secretion system protein

NC_010159
(Yersinia pestis Angola)

3e-30

115) YPA_4012
( YP_653918.1 )

type III secretion system protein

NC_008150
(Yersinia pestis Antiqua)

3e-30

116) YPO0270
( YP_002345352.1 )

type III secretion system protein

NC_003143
(Yersinia pestis CO92)

3e-30

117) YPD4_0235
( YP_005503447.1 )

putative type III secretion apparatus protein

NC_017154
(Yersinia pestis D106004)

3e-30

118) YPD8_0240
( YP_005507323.1 )

putative type III secretion apparatus protein

NC_017160
(Yersinia pestis D182038)

3e-30

119) y0530
( NP_667867.1 )

type III secretion system protein

NC_004088
(Yersinia pestis KIM)

3e-30

120) YPN_3397
( YP_649324.1 )

type III secretion system protein

NC_008149
(Yersinia pestis Nepal516)

3e-30

121) YPDSF_3700
( YP_001165023.1 )

type III secretion system protein

NC_009381
(Yersinia pestis Pestoides F)

3e-30

122) YPZ3_0233
( YP_003566405.1 )

putative type III secretion apparatus protein

NC_014029
(Yersinia pestis Z176003)

3e-30

123) epaP
( YP_001402768.1 )

type III secretion system protein

NC_009708
(Yersinia pseudotuberculosis IP 31758)

3e-30

124) YPTB0327
( YP_068873.2 )

type III secretion system protein

NC_006155
(Yersinia pseudotuberculosis IP 32953)

3e-30

125) YPTS_0351
( YP_001870797.1 )

type III secretion system protein

NC_010634
(Yersinia pseudotuberculosis PB1/+)

3e-30

126) YPK_3902
( YP_001722620.1 )

type III secretion system protein

NC_010465
(Yersinia pseudotuberculosis YPIII)

3e-30

127) USDA257_c21640
( YP_006397503.1 )

translocation protein y4yL

NC_018000
(Sinorhizobium fredii USDA 257)

1e-29

128) C770_GR4pC1264
( YP_007193547.1 )

type III secretion apparatus protein, YscR/HrcR family

NC_019848
(Sinorhizobium meliloti GR4)

1e-29

129) YE105_P0026
( YP_004424928.1 )

type III secretion system protein

NC_015475
(Yersinia enterocolitica 105.5R(r))

4e-29

130) yscR
( YP_001004082.1 )

type III secretion system protein

NC_008791
(Yersinia enterocolitica 8081)

4e-29

131) Y11_p0741
( YP_006007922.1 )

type III secretion inner membrane protein

NC_017565
(Yersinia enterocolitica Y11)

4e-29

132) yscR
( NP_995367.1 )

type III secretion system protein

NC_005813
(Yersinia pestis 91001)

5e-29

133) yscR
( YP_001604476.1 )

type III secretion system protein

NC_010157
(Yersinia pestis Angola)

5e-29

134) YPA_CD0018
( YP_636810.1 )

type III secretion system protein

NC_008122
(Yersinia pestis Antiqua)

5e-29

135) yscR
( NP_395178.1 )

type III secretion system protein

NC_003131
(Yersinia pestis CO92)

5e-29

136) yscR
( YP_005503177.1 )

needle complex export protein

NC_017153
(Yersinia pestis D106004)

5e-29

137) yscR
( YP_005506960.1 )

needle complex export protein

NC_017157
(Yersinia pestis D182038)

5e-29

138) YPDSF_3973
( YP_001154602.1 )

type III secretion system protein

NC_009377
(Yersinia pestis Pestoides F)

5e-29

139) yscR
( YP_003560536.1 )

needle complex export protein

NC_014017
(Yersinia pestis Z176003)

5e-29

140) pYV0071
( YP_068480.1 )

type III secretion system protein

NC_006153
(Yersinia pseudotuberculosis IP 32953)

5e-29

141) YPTS_4289
( YP_001874689.1 )

type III secretion system protein

NC_010635
(Yersinia pseudotuberculosis PB1/+)

5e-29

142) PADK2_17235
( YP_006483428.1 )

type III secretion system protein YscR

NC_018080
(Pseudomonas aeruginosa DK2)

1e-28

143) pscR
( YP_005975938.1 )

type III secretion system protein

NC_017548
(Pseudomonas aeruginosa M18)

2e-28

144) pscR
( YP_005980835.1 )

type III secretion system protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

2e-28

145) pscR
( NP_250384.1 )

type III secretion system protein

NC_002516
(Pseudomonas aeruginosa PAO1)

2e-28

146) ssaR
( YP_008132244.1 )

flagellar biosynthesis protein FliP

NC_021577
(Pseudomonas aeruginosa RP73)

2e-28

147) pscR
( YP_791552.1 )

type III secretion system protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

2e-28

148) sctR
( NP_930977.1 )

type III secretion system protein

NC_005126
(Photorhabdus luminescens TTO1)

3e-28

149) G655_16715
( YP_007710183.1 )

type III secretion system protein YscR

NC_020912
(Pseudomonas aeruginosa B136-33)

3e-28

150) Meso_0110
( YP_672680.1 )

type III secretion system protein

NC_008254
(Chelativorans sp. BNC1)

3e-28

151) ascR
( YP_001144302.1 )

type III secretion system protein

NC_009350
(Aeromonas salmonicida A449)

4e-28

152) REMIM1_PE00285
( YP_008368039.1 )

type III secretion system FliP/YscR family protein

NC_021909
(Rhizobium etli Mim1)

6e-28

153) sctR
( YP_003039885.1 )

type iii secretion component protein sctr

NC_012962
(Photorhabdus asymbiotica ATCC 43949)

1e-27

154) yscR
( YP_436217.1 )

type III secretion system protein

NC_007645
(Hahella chejuensis KCTC 2396)

1e-27

155) yscR
( YP_005082209.1 )

Yop proteins translocation protein R

NC_016642
(Pseudovibrio sp. FO-BEG1)

4e-27

156) pscR
( YP_002441218.1 )

type III secretion system protein

NC_011770
(Pseudomonas aeruginosa LESB58)

5e-27

157) bscR
( YP_006967888.1 )

type III secretion protein

NC_019382
(Bordetella bronchiseptica 253)

2e-26

158) bscR
( NP_888177.1 )

type III secretion system protein

NC_002927
(Bordetella bronchiseptica RB50)

2e-26

159) bscR
( NP_884486.1 )

type III secretion system protein

NC_002928
(Bordetella parapertussis 12822)

2e-26

160) bscR
( YP_006895376.1 )

type III secretion protein

NC_018828
(Bordetella parapertussis Bpp5)

2e-26

161) NH44784_014541
( YP_008028549.1 )

Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components

NC_021285
(Achromobacter xylosoxidans NH44784-1996)

9e-26

162) mlr8766
( NP_106869.1 )

type III secretion system protein

NC_002678
(Mesorhizobium loti MAFF303099)

2e-24

163) sctR
( YP_004670658.1 )

type III secretion integral inner membrane protein

NC_015713
(Simkania negevensis Z)

1e-18

• Sequence Alignments

1) spaP in NC_003198


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  309 bits (1157),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 224/224 (100%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

2) STBHUCCB_29360 in NC_016832


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  309 bits (1157),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 224/224 (100%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

3) spaP in NC_021176


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  309 bits (1157),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 224/224 (100%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

4) spaP in NC_004631


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  309 bits (1157),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 224/224 (100%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

5) SE451236_20545 in NC_021820


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

6) spaP in NC_011149


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

7) SEEB0189_05720 in NC_021844


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

8) SBOV29161 in NC_022241


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

9) spaP in NC_006905


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

10) CFSAN002050_20750 in NC_021818


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

11) spaP in NC_011205


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

12) spaP in NC_011294


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

13) spaP in NC_011274


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

14) spaP in NC_022221


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

15) spaP in NC_016831


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

16) spaP in NC_021810


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

17) SU5_03371 in NC_017623


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

18) CFSAN002069_17820 in NC_021812


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

19) spaP in NC_011083


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

20) spaP in NC_020307


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

21) spaP in NC_011080


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

22) SN31241_39820 in NC_021902


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

23) spaP in NC_010102


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

24) spaP in NC_012125


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

25) I137_13760 in NC_021984


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

26) spaP in NC_011094


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

27) spaP in NC_016856


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

28) spaP in NC_017046


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

29) STMMW_28521 in NC_016854


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

30) spaP in NC_003197


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

31) spaP in NC_016810


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

32) spaP in NC_016857


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

33) spaP in NC_016860


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

34) spaP in NC_021151


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

35) spaP in NC_016863


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

36) CFSAN001921_02625 in NC_021814


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1155),  Expect = 1e-85, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

37) spaP in NC_010067


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  308 bits (1153),  Expect = 2e-85, Method: Compositional matrix adjust.
 Identities = 221/224 (99%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGIALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN++ALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETEAVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETE+VKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

38) spaP in NC_011147


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  307 bits (1150),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 222/224 (99%), Positives = 223/224 (99%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLSKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYL KYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

39) spaP in NC_006511


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  307 bits (1150),  Expect = 4e-85, Method: Compositional matrix adjust.
 Identities = 222/224 (99%), Positives = 223/224 (99%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLSKYSDRELVQFFENAQL  120
            MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYL KYSDRELVQFFENAQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

40) spaP in NC_015761


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  306 bits (1148),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 219/224 (98%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEGVSFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFESAQL  120
            MFVMWPIMHDAYVYFEDE+V+FNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFE+AQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKEEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDK+EIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

41) A464_2914 in NC_021870


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  306 bits (1148),  Expect = 5e-85, Method: Compositional matrix adjust.
 Identities = 219/224 (98%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNGVALLLS  60
            MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLN+VALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMWPIMHDAYVYFEDEGVSFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFESAQL  120
            MFVMWPIMHDAYVYFEDE+V+FNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFE+AQL
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  KRQYGEETETVKRDKEEIEKPSIFALLPAYALSEIKSAFKIGFYlylpfvvvdlvvssvl  180
            KRQYGEETETVKRDK+EIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  181  lalgmmmmsPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224
            LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

42) spaP in NC_005085


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  261 bits (977),  Expect = 2e-71, Method: Compositional matrix adjust.
 Identities = 168/224 (75%), Positives = 199/224 (89%), Gaps = 4/224 (1%)

Query  1    MSNDISLIALLAFSTLLPFLIASGTCFVKFSIVFVMVRNALGLQQVPSNMTLNGIALMLS  60
            M+NDISLIALLAFSTLLPF+IASGTCFVKFSIVFVMVRNALGLQQ+PSNMTLN++AL+LS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   MFVMLPVAQQAYGYYQEERVSFTSVEAVNNFVENGLDGYRGYLQKYSDPELTRFFEKAQS  120
            MFVM P+ ++AY Y+++E V+F  + ++++ V++GLDGYR+YL KYSD EL +FFE+AQ 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  QRSERDGGEAAAPD----DKPSIFALLPAYALSEIKSAFKIGFYLYLPFvvvdlvissvl  176
            +R   +  E+   D    +KPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLV+SSVL
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  177  lalGMMMMSPVTISVPIKLVLFVALDGWTLLSKGLVLQYLDLAT  220
            LALGMMMMSPVTIS PIKLVLFVALDGWTLLSKGL+LQY+D+AT
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

43) fliP in NC_021505


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  233 bits (869),  Expect = 6e-63, Method: Compositional matrix adjust.
 Identities = 143/217 (66%), Positives = 185/217 (86%), Gaps = 3/217 (1%)

Query  1    MIGLLAVASLLPFLIAAGTCYIKFSIVFVIVRNALGLQQVPSNMTLNAVALLLAMFVMSP  60
            +I+LLA ++LLPF+IA+GTC++KFSIVFV+VRNALGLQQ+PSNMTLN+VALLL+MFVM P
Sbjct  7    LIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWP  66

Query  61   VVQQGYDYYKENRVEFTRIDAVVDFLDNGLGGYREYLARYTDPDLAQFFERAQIAR---E  117
            +++++Y Y+ ++ V F  I ++   +D+GL+GYR+YL +Y+D +L QFFE AQ+ R   E
Sbjct  67   IMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGE  126

Query  118  DPRAVNSEFDERLEPSLFALLPAYALSEIKAAFKIGFYLYLPFvivdlvvssillalGMM  177
            +  +V+ + DE   PS+FALLPAYALSEIK+AFKIGFYLYLPFV+VDLVVSS+LLALGMM
Sbjct  127  ETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMM  186

Query  178  MMSPVIISVPIKLVLFVALDGWSLLSTGLVGQYLSLA  214
            MMSPV IS PIKLVLFVALDGW+LLS GL+ QY+ +A
Sbjct  187  MMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIA  223

44) spaP in NC_010694


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  223 bits (830),  Expect = 8e-60, Method: Compositional matrix adjust.
 Identities = 134/224 (60%), Positives = 191/224 (86%), Gaps = 3/224 (1%)

Query  2    LSNDISLIALLSFFTLLPFLIAGGTCFIKFSIVMVMVRNALGIQQVPSTLTLNGIALILT  61
            ++NDISLIALL+F TLLPF+IA+GTCF+KFSIV VMVRNALG+QQ+PS +TLN++AL+L+
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  62   AFVMMPVCQKVSGYIESHHIDFNNSASINQLMDQGLGSYRDYLVHYSDHELIRFFNQVQQ  121
             FVM P+ +    Y+E +++ FN+ +S+++ +D+GL++YRDYL+ YSD+EL++FF++ Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  122  QKT-GETIPEV--EEHELRSLSLITLMPAYALSEIQSAFKIAFYLYVPFVVIDMVVSSIL  178
            ++  GE    V  + +E+   S+++L+PAYALSEI+SAFKI+FYLY+PFVV+D+VVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  179  LALGMMMMSPVTISIPIKLILFVSMNGWSLLTKGMIAQYADLMT  222
            LALGMMMMSPVTIS PIKL+LFV+++GW+LL+KG+I QY D+ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

45) spaP in NC_012751


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  222 bits (828),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 157/224 (71%), Positives = 188/224 (84%), Gaps = 6/224 (2%)

Query  1    MDNDISLISILAFSTLLPFVIASGTCYIKFSIVFVMVRNALGLQQIPSNMTLNGVALLLA  60
            M+NDISLI++LAFSTLLPF+IASGTC++KFSIVFVMVRNALGLQQIPSNMTLN+VALLL+
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   SFVMMPIVKNIYEGHKNAQFDVRNLSSVIEFVENGLDGYRSYLVKYADPELTQFFEKAAS  120
             FVM PI+ + Y    + +    ++SS+   V++GLDGYR YL+KY+D EL QFFE+A  
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  DRKEEDFAGA------EEEKPSIFALLPAYALSEIKSAFKIGFYIYLPFVVVDllissil  174
             R+  + + +      E EKPSIFALLPAYALSEIKSAFKIGFY+YLPFVVVDL++SS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  175  lalgmmmmsPVTISVPIKLVLFVVLDGWTLISKGMILQYMDLAG  218
            LALGMMMMSPVTIS PIKLVLFV LDGWTL+SKG+ILQYMD+A 
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

46) spaP in NC_007712


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  222 bits (828),  Expect = 1e-59, Method: Compositional matrix adjust.
 Identities = 132/222 (60%), Positives = 187/222 (85%), Gaps = 0/222 (0%)

Query  2    LTNDMTLIVLLSFTTLLPFVIAGGTCYIKFSIVLVMVRNALGIQQIPSTLTLNGIALILT  61
            + ND++LI LL+F+TLLPF+IA+GTC++KFSIV+VMVRNALG+QQIPS +TLN++AL+L+
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  62   AFVMMPVCQNISHYIETHQTNFNNIDSTMQFVDQGLGSYRDYLVRYSDKKLIRFFCETQH  121
             FVM P+ ++   Y+E ++  FN+I S  + VD+GL++YRDYL++YSD+ L++FF ++Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  122  RQSGGEQETDLECTEENmsslslmmlmPAYALSEVQSAFKIAFFLYVPFVVIDMVVSSIL  181
            ++  GE+   +    +++   S+  L+PAYALSE++SAFKI+F+LY+PFVV+D+VVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  182  LALGMMMMSPVTISIPIKLILFVAMDGWTLLTKGLILQYADL  223
            LALGMMMMSPVTIS PIKL+LFVA+DGWTLL+KGLILQY D+
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDI  222

47) EAM_2659 in NC_013971


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  220 bits (818),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 137/224 (62%), Positives = 192/224 (86%), Gaps = 3/224 (1%)

Query  2    LSNDISLIALLSFFTLLPFIIAGGTCFIKFSIVMVMVRNALGIQQVPSTLTLNGIALIMT  61
            ++NDISLIALL+F TLLPFIIA+GTCF+KFSIV VMVRNALG+QQ+PS +TLN++AL+++
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  62   AFVMMPICQKISSYVETNHIDFNNSASVTQLMDQGLGGYRDYLVRYSDHELIRYFNKIQ-  120
             FVM PI +    Y E +++ FN+ +S+++ +D+GL+GYRDYL++YSD+EL+++F++ Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  QQQAGESAPEV--EEHQLSSLSLMTLMPAYALSEIQSAFKIAFYLYVPFvvidlvvssil  178
            ++Q GE +  V  + +++   S+ +L+PAYALSEI+SAFKI+FYLY+PFVV+DLVVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  179  lalGMMMMSPVTISIPIKLILFVAMNGWSLLTKGMIAQYTDLMT  222
            LALGMMMMSPVTIS PIKL+LFVA++GW+LL+KG+I QY D+ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

48) spaP1 in NC_013961


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  220 bits (818),  Expect = 7e-59, Method: Compositional matrix adjust.
 Identities = 137/224 (62%), Positives = 192/224 (86%), Gaps = 3/224 (1%)

Query  2    LSNDISLIALLSFFTLLPFIIAGGTCFIKFSIVMVMVRNALGIQQVPSTLTLNGIALIMT  61
            ++NDISLIALL+F TLLPFIIA+GTCF+KFSIV VMVRNALG+QQ+PS +TLN++AL+++
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  62   AFVMMPICQKISSYVETNHIDFNNSASVTQLMDQGLGGYRDYLVRYSDHELIRYFNKIQ-  120
             FVM PI +    Y E +++ FN+ +S+++ +D+GL+GYRDYL++YSD+EL+++F++ Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  121  QQQAGESAPEV--EEHQLSSLSLMTLMPAYALSEIQSAFKIAFYLYVPFvvidlvvssil  178
            ++Q GE +  V  + +++   S+ +L+PAYALSEI+SAFKI+FYLY+PFVV+DLVVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  179  lalGMMMMSPVTISIPIKLILFVAMNGWSLLTKGMIAQYTDLMT  222
            LALGMMMMSPVTIS PIKL+LFVA++GW+LL+KG+I QY D+ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

49) spaP in NC_017445


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  218 bits (813),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 132/224 (59%), Positives = 189/224 (85%), Gaps = 3/224 (1%)

Query  2    LNNDISLIAVLSFFTLLPFLIAGGTCFIKFSIVLVMMRNALGIQQVPSNLTLNGIALILS  61
            + NDISLIA+L+F TLLPF+IA+GTCF+KFSIV+VM+RNALG+QQ+PSN+TLN++AL+LS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  62   AFVMMPVCQRIADDVESRHIDFNQSGAIPQLMDDGLGSYREYLVHYSDHDLIHFFNNVQK  121
             FVM P+ +      E  ++ FN+ +++++ +D+GL++YR+YL+ YSD++L++FF+N Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  122  KR---NDDNEVDITEHELRRLPLMTLMPAYALSEIQSAFKIAFYIYIPFVVIDMVVSSIL  178
            KR   ++ + V    +E+ + ++ +L+PAYALSEI+SAFKI+FY+Y+PFVV+D+VVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  179  LALGMMMMSPVTISIPIKLILFVAMDGWSLLAKGLITQYADLMT  222
            LALGMMMMSPVTIS PIKL+LFVA+DGW+LL+KGLI QY D+ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

50) spaP in NC_012214


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  217 bits (808),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 130/224 (59%), Positives = 189/224 (85%), Gaps = 3/224 (1%)

Query  2    LNNDISLIGVLSFFTLLPFLIAGGTCFIKFSIVLVMMRNALGIQQVPSNLTLNGIALILS  61
            + NDISLI++L+F TLLPF+IA+GTCF+KFSIV+VM+RNALG+QQ+PSN+TLN++AL+LS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  62   AFVMMPVCQRIADDVESRHIDFNQSGAIPQLMDDGLGSYREYLVHYSDHDLIHFFNKVQK  121
             FVM P+ +      E  ++ FN+ +++++ +D+GL++YR+YL+ YSD++L++FF++ Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  122  KR---NDDNEVDITEHELRRLPLMTLMPAYALSEIQSAFKIAFYIYIPFVVIDMVVSSIL  178
            KR   ++ + V    +E+ + ++ +L+PAYALSEI+SAFKI+FY+Y+PFVV+D+VVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  179  LALGMMMMSPVTISIPIKLILFVAMDGWSLLAKGLITQYADLMT  222
            LALGMMMMSPVTIS PIKL+LFVA+DGW+LL+KGLI QY D+ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

51) spaP in NC_017731


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  217 bits (809),  Expect = 4e-58, Method: Compositional matrix adjust.
 Identities = 128/217 (59%), Positives = 183/217 (85%), Gaps = 7/217 (3%)

Query  1    MLALVSLATLLPFIIAAGTCYLKISIVLIMVRNAMGVQQVPSTMALNGIAMLLSLFVMMP  60
            ++AL++++TLLPFIIA+GTC++K+SIV++MVRNA+G+QQ+PS M+LN++A+LLS+FVM P
Sbjct  7    LIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWP  66

Query  61   VVQDISHYMREEKVDFGNVESVDNFVDGGLGRYKAYLQKYSDPELVQFFESVQQQRN-EE  119
            +++D   Y  +E V F ++ S+ + VD GL+ Y+ YL KYSD ELVQFFE+ Q +R+  E
Sbjct  67   IMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGE  126

Query  120  PMDA------EAHSATLFSLLPAYALSEVKSAFEIGFYIYLPFVVIDLVISSILLALGMM  173
              ++      E + +++F+LLPAYALSE+KSAF IGFY+YLPFVV+DLV+SS+LLALGMM
Sbjct  127  ETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMM  186

Query  174  MMSPVTISVPVKLILFVAIDGWSLISKGLVMQYLELA  210
            MMSPVTIS P+KL+LFVA+DGW+L+SKGL++QY+++A
Sbjct  187  MMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIA  223

52) spaP in NC_010694


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  216 bits (803),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 134/224 (60%), Positives = 190/224 (85%), Gaps = 3/224 (1%)

Query  2    LNNEISLIALLSFFTLLPFIIAGGTCFIKFSIVLVMMRNALGIQQVPSNLTLNGVALVLT  61
            + N+ISLIALL+F TLLPFIIA+GTCF+KFSIV+VM+RNALG+QQ+PSN+TLN+VAL+L+
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  62   AFVMMPVCQRISGYIEAKSLDFNERGALSQLMNEGIESYREYLVRYSDHNLILFFNNVEH  121
             FVM P+ +    Y+E   + FN+ ++LS+ ++EG+++YR+YL++YSD++L+ FF+N + 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  122  RNEVTLED---RVPDEELSQLSLLTLMPAYALSEIQSAFRIAFYLYIPFvvidlvvssil  178
            + +   E    +   +E+ + S+++L+PAYALSEI+SAF+I+FYLY+PFVV+DLVVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  179  lalGMMMMSPVTISIPIKLILFVAMDGWALLAKGLITQYLDLMT  222
            LALGMMMMSPVTIS PIKL+LFVA+DGW+LL+KGLI QY+D+ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

53) spaP in NC_017390


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  216 bits (803),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 130/224 (59%), Positives = 189/224 (85%), Gaps = 3/224 (1%)

Query  8    LNNDISLIGVLSFFTLLPFLIAGGTCFIKFSIVLVMMRNALGIQQVPSNLTLNGIALILS  67
            + NDISLI++L+F TLLPF+IA+GTCF+KFSIV+VM+RNALG+QQ+PSN+TLN++AL+LS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  68   AFVMMPVCQRIADDVESRHIDFNQSGAIPQLMDDGLGSYREYLVHYSDHDLIHFFNKVQK  127
             FVM P+ +      E  ++ FN+ +++++ +D+GL++YR+YL+ YSD++L++FF++ Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  128  KR---NDDNEVDITEHELRRLPLMTLMPAYALSEIQSAFKIAFYIYIPFVVIDMVVSSIL  184
            KR   ++ + V    +E+ + ++ +L+PAYALSEI+SAFKI+FY+Y+PFVV+D+VVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  185  LALGMMMMSPVTISIPIKLILFVAMDGWSLLAKGLITQYADLMT  228
            LALGMMMMSPVTIS PIKL+LFVA+DGW+LL+KGLI QY D+ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

54) EAM_1565 in NC_013971


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  215 bits (802),  Expect = 1e-57, Method: Compositional matrix adjust.
 Identities = 128/224 (58%), Positives = 188/224 (84%), Gaps = 3/224 (1%)

Query  2    LNNDISLIAVLSFFTLLPFIIAGGTCFIKFSIVLVMMRNALGIQQVPSNLTLNGISLILT  61
            + NDISLIA+L+F TLLPFIIA+GTCF+KFSIV+VM+RNALG+QQ+PSN+TLN+++L+L+
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  62   AFIMMPVCQRIIDDVETRHIDFNQSSAFSQFVNDGLDGYREYLVHYSDHDLIHFFNKVQQ  121
             F+M P+ +      E  ++ FN+ S++S+ V++GLDGYR+YL+ YSD++L++FF++ Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  122  R---NNDDNVANTFEHELTRLPLMTLMPAYALSEIQSAFRIAFYIYIPFVVIDMVVSSIL  178
            +    ++ +  +   +E+ + ++ +L+PAYALSEI+SAF+I+FY+Y+PFVV+D+VVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  179  LALGMMMMSPVTISIPIKLILFVAMDGWSLLTKGLIAQYAELMT  222
            LALGMMMMSPVTIS PIKL+LFVA+DGW+LL+KGLI QY ++ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

55) spaP3 in NC_013961


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  213 bits (794),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 128/224 (58%), Positives = 188/224 (84%), Gaps = 3/224 (1%)

Query  8    LNNDISLIAVLSFFTLLPFIIAGGTCFIKFSIVLVMMRNALGIQQVPSNLTLNGISLILT  67
            + NDISLIA+L+F TLLPFIIA+GTCF+KFSIV+VM+RNALG+QQ+PSN+TLN+++L+L+
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  68   AFIMMPVCQRIIDDVETRHIDFNQSSAFSQFVNDGLDGYREYLVHYSDHDLIHFFNKVQQ  127
             F+M P+ +      E  ++ FN+ S++S+ V++GLDGYR+YL+ YSD++L++FF++ Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  128  R---NNDDNVANTFEHELTRLPLMTLMPAYALSEIQSAFRIAFYIYIPFVVIDMVVSSIL  184
            +    ++ +  +   +E+ + ++ +L+PAYALSEI+SAF+I+FY+Y+PFVV+D+VVSS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  185  LALGMMMMSPVTISIPIKLILFVAMDGWSLLTKGLIAQYAELMT  228
            LALGMMMMSPVTIS PIKL+LFVA+DGW+LL+KGLI QY ++ T
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

56) spaP in NC_010660


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  211 bits (784),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 133/224 (60%), Positives = 179/224 (80%), Gaps = 8/224 (3%)

Query  1    MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQQVPSNMTLNGIALIMA  60
            M +D+SLIA L+F TLLPF++A+GTC++KFSIVFVMVRNALGLQQ+PSNMTLN++AL+++
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   LFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLIEYKQYLKKHTDLELARFFQRSE-  119
            +FVM PI++ +Y  + +    F+ IS + +  D GL  Y++YL K +D EL +FF+ ++ 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  120  -----EENADLKSAENN--DYSLFSLLPAYALSEIKDAFKIGFYLYLPFIVVDLVISSIL  172
                 EE   +K   ++    S+F+LLPAYALSEIK AFKIGFYLYLPF+VVDLV+SS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  173  LALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA  216
            LALGMMMMSP+TIS PIKLVLFVALDGW +LSK+LI QY+++++
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

57) spaP in NC_007607


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  211 bits (784),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 133/224 (60%), Positives = 179/224 (80%), Gaps = 8/224 (3%)

Query  1    MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQQVPSNMTLNGIALIMA  60
            M +D+SLIA L+F TLLPF++A+GTC++KFSIVFVMVRNALGLQQ+PSNMTLN++AL+++
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   LFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLIEYKQYLKKHTDLELARFFQRSE-  119
            +FVM PI++ +Y  + +    F+ IS + +  D GL  Y++YL K +D EL +FF+ ++ 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  120  -----EENADLKSAENN--DYSLFSLLPAYALSEIKDAFKIGFYLYLPFIVVDLVISSIL  172
                 EE   +K   ++    S+F+LLPAYALSEIK AFKIGFYLYLPF+VVDLV+SS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  173  LALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA  216
            LALGMMMMSP+TIS PIKLVLFVALDGW +LSK+LI QY+++++
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

58) spaP in NC_017319


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 135/224 (61%), Positives = 179/224 (80%), Gaps = 8/224 (3%)

Query  1    MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQQVPSNMTLNGIALIMA  60
            M +D+SLIA L+F TLLPF++A+GTC++KFSIVFVMVRNALGLQQ+PSNMTLN++AL+++
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   LFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLMEYKQYLKKHTDLELARFFQRSE-  119
            +FVM PI++ +Y  + +    F+ IS + +  D GL  Y++YL K +D EL +FF+ ++ 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  120  -----EENADLKSAEN--NDYSLFSLLPAYALSEIKDAFKIGFYLYLPFvvvdlvissil  172
                 EE   +K   +  +  S+F+LLPAYALSEIK AFKIGFYLYLPFVVVDLV+SS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  173  lalGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINIPA  216
            LALGMMMMSP+TIS PIKLVLFVALDGW +LSK+LI QY++I++
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

59) spaP in NC_004851


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 135/224 (61%), Positives = 179/224 (80%), Gaps = 8/224 (3%)

Query  1    MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQQVPSNMTLNGIALIMA  60
            M +D+SLIA L+F TLLPF++A+GTC++KFSIVFVMVRNALGLQQ+PSNMTLN++AL+++
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   LFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLMEYKQYLKKHTDLELARFFQRSE-  119
            +FVM PI++ +Y  + +    F+ IS + +  D GL  Y++YL K +D EL +FF+ ++ 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  120  -----EENADLKSAEN--NDYSLFSLLPAYALSEIKDAFKIGFYLYLPFvvvdlvissil  172
                 EE   +K   +  +  S+F+LLPAYALSEIK AFKIGFYLYLPFVVVDLV+SS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  173  lalGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINIPA  216
            LALGMMMMSP+TIS PIKLVLFVALDGW +LSK+LI QY++I++
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

60) spaP in NC_007385


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  205 bits (762),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 134/224 (60%), Positives = 179/224 (80%), Gaps = 8/224 (3%)

Query  1    MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQQVPSNMTLNGIALIMA  60
            M +D+SLIA L+F TLLPF++A+GTC++KFSIVFVMVRNALGLQQ+PSNMTLN++AL+++
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  61   LFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLMEYKQYLKKHTDLELARFFQRSE-  119
            +FVM PI++ +Y  + +    F+ IS + +  D GL  Y++YL K +D EL +FF+ ++ 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  120  -----EENADLKSAEN--NDYSLFSLLPAYALSEIKDAFKIGFYLYLPFvvvdlvissil  172
                 EE   +K   +  +  S+F+LLPAYALSEIK AFKIGFYLYLPFVVVDLV+SS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  173  lalGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA  216
            LALGMMMMSP+TIS PIKLVLFVALDGW +LSK+LI QY+++++
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIAT  224

61) xsaW in NC_013722


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  203 bits (754),  Expect = 7e-54, Method: Compositional matrix adjust.
 Identities = 119/224 (54%), Positives = 174/224 (78%), Gaps = 5/224 (2%)

Query  4    NQELSLIALIAVMALIPFLFASGTCFLKFSVVFVLLRNAIGMQQVPSNMVLNSIALMLAA  63
             +++SLIAL+A  +L+PF++ASGTCF+KFS+VFV++RNA+G+QQ+PSNM LNS+AL+L+ 
Sbjct  2    GNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSM  61

Query  64   FVMQPVITSTFHAFQETDQV-TSMDEVGPYLTTVLTPYRQYLAKYADKELVEFFQRVPST  122
            FVM P++  ++  F++ D     +  ++  +   L  YR+YL KY+D+ELV+FF+     
Sbjct  62   FVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFE----N  117

Query  123  VQNTPTTPGQGTANQSAIHQVQQPSLYALLPAYGLTELRDAFRIGFYLYLPFVVIDLIVS  182
             Q       +  + +   +++++PS++ALLPAY+L+E++ AF+IGFYLYLPFVV+DL+VS
Sbjct  118  AQLKRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVS  177

Query  183  NVLLALGMMMMSPVTISMPIKLILFVALDGWTLVSKDLMEPYMA  226
            +VLLALGMMMMSPVTIS PIKL+LFVALDGWTL+SK+L+  YM 
Sbjct  178  SVLLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMD  221

62) spaP in NC_019670


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  196 bits (726),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 129/199 (65%), Positives = 167/199 (84%), Gaps = 4/199 (2%)

Query  23   GTCYIKFSIVFVIVRNALGLQQVPSnmalnaialmlaiFVMTPVMKQGYGYYKEEQVAFT  82
            GTC++KFSIVFV+VRNALGLQQ+PSNM+LN++AL+L++FVM P+M ++Y Y+ +E+V+F 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  83   DIESVVNFAENGLGGYKDYLRKYTDPELALFFERAQAVQ---SESDIVLPADEEL-TPSL  138
            DI S+ +  ++GL+GY+DYL KY+D EL  FFE AQ  +    E++ V    +E+  PS+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  139  FSLLPAYALSEIKSAFKIGFYLYLPFVIVDLVISSILLALGMMMMSPVIISVPIKLVLFV  198
            F+LLPAYALSEIKSAFKIGFYLYLPFV+VDLV+SS+LLALGMMMMSPV IS PIKLVLFV
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  199  ALDGWALLSTGLVKQYLTL  217
            ALDGW+LLS GL+ QY+ +
Sbjct  204  ALDGWTLLSKGLILQYMDI  222

63) ETEC_3055 in NC_017633


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (713),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 139/206 (68%), Positives = 177/206 (86%), Gaps = 5/206 (2%)

Query  18   PFIIASGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYYNSQN  77
            PFIIASGT F+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   EnlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVNFFEKIQ-KVNSSEDNEVIFDD---  133
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV+FFE+ Q K + +E+ E +  D   
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  134  -DNISIISLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SI++LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

64) spaP in NC_009800


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (713),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 135/206 (66%), Positives = 173/206 (84%), Gaps = 5/206 (2%)

Query  18   PFIIASGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYYNSQN  77
            PFIIASGT F+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   ENLSFNNLASVVNFVETGMSGYKSYLIKYSEPELVNFFEKIQ-----KVnssedneeifd  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV+FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisifsLLPAYALSEIKSAFIIGFYIYLPFvvvdlvisivlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+S VLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

65) spaP in NC_006349


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

66) spaP in NC_008835


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

67) spaP in NC_009079


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

68) spaP in NC_017832


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

69) spaP in NC_009078


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

70) spaP in NC_007435


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

71) spaP in NC_009075


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

72) BPC006_II2061 in NC_018529


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

73) spaP in NC_006351


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLTRYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

74) epaP in NC_021877


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  192 bits (714),  Expect = 1e-50, Method: Compositional matrix adjust.
 Identities = 124/207 (60%), Positives = 171/207 (83%), Gaps = 3/207 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMSGASVNEFIDGGLGDYKRYLARYSDPELVRFFERAQTARLKGddadaadaddaP  138
            + +     +S++  +D GL++Y+ YL +YSD ELV+FFE AQ  R  G   ++       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG--EETETVKRDK  135

Query  139  DGLDN-SLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTISV  197
            D +++ S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  198  PIKLILFVAMDGWTLICKGLIEQYLNL  224
            PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQYMDI  222

75) spaP in NC_016830


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  191 bits (708),  Expect = 3e-50, Method: Compositional matrix adjust.
 Identities = 129/199 (65%), Positives = 166/199 (84%), Gaps = 4/199 (2%)

Query  23   GTCYIKFSIVFVIVRNALGLQQVPSnmalnaialmlaiFVMTPVMKQGHDYYKREAVTFT  82
            GTC++KFSIVFV+VRNALGLQQ+PSNM+LN++AL+L++FVM P+M ++  Y+  E VTF 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  83   DIASVVDFAENGLGSYKDYLRKYTDPELAQFFERAQ---AFQDETYAGLPADEEVE-ASL  138
            DI+S+    ++GL++Y+DYL KY+D EL QFFE AQ    + +ET +     +E+E +S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  139  FSLLPAYALSEIKSAFKIGFYLYLPFVIVDLVISSILLALGMMMMSPVIISVPIKLVLFV  198
            F+LLPAYALSEIKSAFKIGFYLYLPFV+VDLV+SS+LLALGMMMMSPV IS PIKLVLFV
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  199  ALDGWALLSTGLVKQYLTL  217
            ALDGW+LLS GL+ QY+ +
Sbjct  204  ALDGWTLLSKGLILQYMDI  222

76) epaP in NC_021174


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  189 bits (703),  Expect = 8e-50, Method: Compositional matrix adjust.
 Identities = 124/209 (60%), Positives = 169/209 (81%), Gaps = 4/209 (1%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMNGASVNDFIDGGLGGYKRYLTRYSDPALVRFFERAQAARLKgddadaadadvag  138
            + +   + +S++  +D GL+GY+ YL +YSD  LV+FFE AQ  R    + +     V  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKR----QYGEETETVKR  133

Query  139  dgpdgldNSLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVTI  198
            D  +    S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVTI
Sbjct  134  DKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTI  193

Query  199  SVPIKLILFVAMDGWTLICKGLIEQYLNL  227
            S PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  194  STPIKLVLFVALDGWTLLSKGLILQYMDI  222

77) spaP in NC_007712


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  188 bits (699),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 123/207 (60%), Positives = 168/207 (82%), Gaps = 6/207 (2%)

Query  24   PFIIASGTCYIKFSIVFVMVRNALGLQQVPSNLTLNGIALMLAMFIMGPIAGDAYNAYQE  83
            PFIIASGTC++KFSIVFVMVRNALGLQQ+PSN+TLN++AL+L+MF+M PI  DAY  +++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  84   QPVALGSAASVLEFLENSMESYRHYLQKYADPRLTEFFDRah------ggggaahdapas  137
            + V++   +S+   +++++++YR+YL KY+D  L +FF+ A+          +       
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  138  ghapsMLALLPAYALSEIKDSFRIGFYLYLPFvvvdllissvllalGMMMMSPITLSVPI  197
             + PS++ALLPAYALSEIK +F+IGFYLYLPFVVVDL++SSVLLALGMMMMSP+T+S PI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  198  KLVLFVMLDGWTLLSQGLVLQYLDMGA  224
            KLVLFV LDGWTLLS+GL+LQY+D+++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIAT  224

78) spaP in NC_008800


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  188 bits (696),  Expect = 3e-49, Method: Compositional matrix adjust.
 Identities = 131/223 (59%), Positives = 183/223 (83%), Gaps = 5/223 (2%)

Query  5    LPGDIPLLAIVAFSSLLPFVIAAGTCYLKISIVLIMVRNAMGVQQVPsglalngiallls  64
            +  DI+L+A++AFS+LLPF+IA+GTC++K+SIV++MVRNA+G+QQ+PS ++LN++ALLLS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  65   lFVMMPVIQDVNHYMRTEKVDFSNVDSVDKFIDGGLGSYTAYLKKYSDPELLNFFESLQQ  124
            +FVM P+++D   Y   E V F+++ S+ K +D GL++Y  YL KYSD EL++FFE+ Q 
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQL  120

Query  125  GR-----SEEESMAEADTREPALFSLLPAYALSEIKSAFEIGFYIYLPFVVidliissil  179
             R     +E       +   P++F+LLPAYALSEIKSAF IGFY+YLPFVV+DL++SS+L
Sbjct  121  KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVL  180

Query  180  lalgmmmmsPVTISVPVKLILFVAIDGWALISKGLIMQYMELA  222
            LALGMMMMSPVTIS P+KL+LFVA+DGW+L+SKGLI+QYM++A
Sbjct  181  LALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIA  223

79) spaP in NC_011353


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYYNSQN  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   EnlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

80) spaP in NC_002655


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYYNSQN  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   EnlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

81) spaP in NC_002695


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYYNSQN  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   EnlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

82) spaP in NC_013008


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYYNSQN  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   EnlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

83) spaP in NC_017906


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  186 bits (688),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYYNSQN  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   EnlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

84) epaP in NC_017626


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGIALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN++ALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  denisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             E+ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

85) spaP in NC_009801


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (675),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 136/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRKALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VR+ALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

86) spaP in NC_011741


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

87) spaP in NC_017660


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

88) EKO11_0869 in NC_016902


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

89) LY180_14720 in NC_022364


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

90) ECO103_3430 in NC_013353


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

91) ECO111_3598 in NC_013364


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

92) spaP in NC_013361


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

93) spaP in NC_011415


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

94) spaP in NC_011751


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

95) epaP in NC_017635


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

96) spaP in NC_017664


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (676),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiid  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

97) spaP in NC_007650


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  182 bits (675),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 121/210 (58%), Positives = 170/210 (81%), Gaps = 5/210 (2%)

Query  19   PFVVAAGSCFIKFSIVLVLVRNALGIQQVPSNLALNSIALIMSLFVMMPVAQSAYRYLQH  78
            PF++A+G+CF+KFSIV+V+VRNALG+QQ+PSN++LNS+AL++S+FVM P+ + AY Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   HPLDVMNGSSVNDFIDGGLGDYKRYLTRYSDPELVRFFERaqaarlkrddadaadadada  138
            + +   + SS++  +D GL++Y+ YL +YSD ELV+FFE       +     + ++++  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFEN-----AQLKRQYGEETETVK  132

Query  139  gdepdgldNSLFSLLPAYALTEIKSAFKIGFYLYLPFlvvdmvvssvllalGMMMMSPVT  198
             D  +    S+F+LLPAYAL+EIKSAFKIGFYLYLPF+VVD+VVSSVLLALGMMMMSPVT
Sbjct  133  RDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVT  192

Query  199  ISVPIKLILFVAMDGWTLICKGLIEQYLNL  228
            IS PIKL+LFVA+DGWTL+ KGLI QY+++
Sbjct  193  ISTPIKLVLFVALDGWTLLSKGLILQYMDI  222

98) spaP in NC_017646


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  180 bits (667),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 137/206 (67%), Positives = 173/206 (84%), Gaps = 5/206 (2%)

Query  18   PFIIASGTCFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYnnsqn  77
            PFIIASGTCF+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   enlsfnnvasvvnfvETGMSGYKSYLRKYSEPELVSFFEKIQ-----KVnssednediid  132
            E+++FN+++S+ + V+ G+ GY+ YL KYS+ ELV FFE+ Q       ++   + D  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnisiFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ SIF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

99) MU9_28 in NC_020418


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  179 bits (663),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 119/205 (59%), Positives = 173/205 (85%), Gaps = 7/205 (3%)

Query  19   PFILAAGTCYLKFSIVFVMVRNALGVQQVPSNMVLNAIAFILAMVVMFPLVSKTYAYINE  78
            PFI+A+GTC++KFSIVFVMVRNALG+QQ+PSNM LN++A++L+M VM P++  +Y Y+++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  79   NPVELSQPESLSRFTDEGLQDYRDYLFRYADKPLLYFFAQTDV----DEDAEPELSDARD  134
            + V +++  SLS+  DEGL++YRDYL++Y+D+ L+ FF ++++    +E++E    D  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  135  I---AFFPLLAAYALGEIKSAFLISFYLYLPFIVIDlvvssvllalgmmmmsPVTLSVPI  191
            I   ++F+LL+AYAL+EIKSAF I+FYLYLPF+V+DLVVSSVLLALGMMMMSPVT+S PI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  192  KLILFIALDGWSLLSTSLVSQYLEL  216
            KL+LF+ALDGW+LLS +L+ QY+++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDI  222

100) spaP in NC_010468


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  178 bits (661),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 135/206 (66%), Positives = 174/206 (85%), Gaps = 5/206 (2%)

Query  18   PFIIASGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGKEIYYNSQN  77
            PFIIASGT F+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  78   EnlsfnnvasvvnfvETGMSGYKSYLIKYSEPELVNFFEKIQ-----KVnssedneeifd  132
            E+++FN+++S+ + V+ G+ GY+ YLIKYS+ ELV+FFE+ Q       ++   + +  +
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDE  137

Query  133  ddnipifSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVTISTPI  192
             ++ +IF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPVTISTPI
Sbjct  138  IEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPI  197

Query  193  KLILFVAMDGWTMLSKGLILQYFDLS  218
            KL+LFVA+DGWT+LSKGLILQY D++
Sbjct  198  KLVLFVALDGWTLLSKGLILQYMDIA  223

101) spaP in NC_011748


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 130/201 (65%), Positives = 167/201 (84%), Gaps = 5/201 (2%)

Query  23   SGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGTEIYYNSQNEnlsf  82
            SGT F+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++E+++F
Sbjct  23   SGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTF  82

Query  83   nnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiidddnis  137
            N+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  + ++ S
Sbjct  83   NDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPS  142

Query  138  iFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVIISTPIKLILF  197
            IF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPV ISTPIKL+LF
Sbjct  143  IFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLF  202

Query  198  VAMDGWTMLSKGLILQYFDLS  218
            VA+DGWT+LSKGLILQY D++
Sbjct  203  VALDGWTLLSKGLILQYMDIA  223

102) spaP in NC_020163


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 130/201 (65%), Positives = 167/201 (84%), Gaps = 5/201 (2%)

Query  23   SGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGTEIYYNSQNEnlsf  82
            SGT F+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++E+++F
Sbjct  23   SGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTF  82

Query  83   nnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiidddnis  137
            N+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  + ++ S
Sbjct  83   NDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPS  142

Query  138  iFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVIISTPIKLILF  197
            IF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPV ISTPIKL+LF
Sbjct  143  IFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLF  202

Query  198  VAMDGWTMLSKGLILQYFDLS  218
            VA+DGWT+LSKGLILQY D++
Sbjct  203  VALDGWTLLSKGLILQYMDIA  223

103) spaP in NC_018650


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 130/201 (65%), Positives = 167/201 (84%), Gaps = 5/201 (2%)

Query  23   SGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGTEIYYNSQNEnlsf  82
            SGT F+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++E+++F
Sbjct  23   SGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTF  82

Query  83   nnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiidddnis  137
            N+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  + ++ S
Sbjct  83   NDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPS  142

Query  138  iFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVIISTPIKLILF  197
            IF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPV ISTPIKL+LF
Sbjct  143  IFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLF  202

Query  198  VAMDGWTMLSKGLILQYFDLS  218
            VA+DGWT+LSKGLILQY D++
Sbjct  203  VALDGWTLLSKGLILQYMDIA  223

104) spaP in NC_018661


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 130/201 (65%), Positives = 167/201 (84%), Gaps = 5/201 (2%)

Query  23   SGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGTEIYYNSQNEnlsf  82
            SGT F+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++E+++F
Sbjct  23   SGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTF  82

Query  83   nnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiidddnis  137
            N+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  + ++ S
Sbjct  83   NDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPS  142

Query  138  iFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVIISTPIKLILF  197
            IF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPV ISTPIKL+LF
Sbjct  143  IFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLF  202

Query  198  VAMDGWTMLSKGLILQYFDLS  218
            VA+DGWT+LSKGLILQY D++
Sbjct  203  VALDGWTLLSKGLILQYMDIA  223

105) spaP in NC_018658


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  172 bits (636),  Expect = 2e-44, Method: Compositional matrix adjust.
 Identities = 130/201 (65%), Positives = 167/201 (84%), Gaps = 5/201 (2%)

Query  23   SGTYFIKFSIVFVIVRNALGLQQVPSNMTLNGVALLLSMFVMMPVGTEIYYNSQNEnlsf  82
            SGT F+KFSIVFV+VRNALGLQQ+PSNMTLN+VALLLSMFVM P+  + Y   ++E+++F
Sbjct  23   SGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTF  82

Query  83   nnvasvvnfvETGMSGYKSYLIKYSEPELVSFFEKIQ-----KVnssedneeiidddnis  137
            N+++S+ + V+ G+ GY+ YLIKYS+ ELV FFE+ Q       ++   + +  + ++ S
Sbjct  83   NDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPS  142

Query  138  iFSLLPAYALSEIKSAFIIGFYIYLPFvvvdlvissvlltlGMMMMSPVIISTPIKLILF  197
            IF+LLPAYALSEIKSAF IGFY+YLPFVVVDLV+SSVLL+LGMMMMSPV ISTPIKL+LF
Sbjct  143  IFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLF  202

Query  198  VAMDGWTMLSKGLILQYFDLS  218
            VA+DGWT+LSKGLILQY D++
Sbjct  203  VALDGWTLLSKGLILQYMDIA  223

106) spaP in NC_022000


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  167 bits (616),  Expect = 7e-43, Method: Compositional matrix adjust.
 Identities = 109/199 (55%), Positives = 154/199 (78%), Gaps = 7/199 (3%)

Query  24   GTCYLKFSIVLVMTRNALGVQQVPSNMVLNAIALMMALFVMTPITKNICYYFIENKVDMS  83
            GTC++KFSIV+VM RNALG+QQ+PSNM LN++AL++++FVM PI  +   YF ++ V  +
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  84   SPDAIESFSNEALGDYKKYLYHYSDPDLLAFFEQAQENRPNSDG------DKENIENsll  137
               ++    +E+L++Y+ YL  YSD +L+ FFE+AQ +R  ++       DK++IE++ +
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  138  sllpay-alsEIKSAFIIGFYLYLPFIVIDLVVSCILLALGMMMMSPITLSVPLKLILFI  196
              L +  ALSEIKSAF IGFYLYLPF+V+DLVVS +LLALGMMMMSP+T+S P+KL+LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  197  AMDGWGLLSKGLINQYLDL  215
            A+DGW LLSKGLI QY+D+
Sbjct  204  ALDGWTLLSKGLILQYMDI  222

107) spaP in NC_010554


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  165 bits (608),  Expect = 3e-42, Method: Compositional matrix adjust.
 Identities = 108/199 (55%), Positives = 154/199 (78%), Gaps = 7/199 (3%)

Query  24   GTCYLKFSIVLVMTRNALGVQQVPSNMVLNAIALMMALFVMTPITKNICYYIIENKVDMS  83
            GTC++KFSIV+VM RNALG+QQ+PSNM LN++AL++++FVM PI  +   Y+ ++ V  +
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  84   SPDAIESFSNEALGDYKKYLYHYSDPDLLAFFEQAQENRPNSDG------DKENIENsll  137
               ++    +E+L++Y+ YL  YSD +L+ FFE+AQ +R  ++       DK++IE++ +
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  138  sllpay-alsEIKSAFIIGFYLYLPFIVIDLVVSCILLALGMMMMSPITLSVPLKLILFI  196
              L +  ALSEIKSAF IGFYLYLPF+V+DLVVS +LLALGMMMMSP+T+S P+KL+LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  197  AMDGWGLLSKGLINQYLDL  215
            A+DGW LLSKGLI QY+D+
Sbjct  204  ALDGWTLLSKGLILQYMDI  222

108) escR in NC_013353


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (504),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 86/185 (47%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKENVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K +++E V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

109) escR in NC_013361


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (504),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 86/185 (47%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKENVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K +++E V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

110) escR in NC_013364


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

111) escR in NC_011601


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

112) epaP in NC_011353


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

113) escR in NC_002655


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

114) ECs4583 in NC_002695


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (504),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/187 (46%), Positives = 140/187 (75%), Gaps = 9/187 (4%)

Query  29   GIGTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPIN  88
            + GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + 
Sbjct  22   ASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVT  81

Query  89   YTDSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------  139
            + D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       
Sbjct  82   FNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKP  141

Query  140  SLFILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILL  199
            S+F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++L
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  200  FILVGGW  206
            F+ ++GW
Sbjct  202  FVALDGW  208

115) escR in NC_013008


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

116) escR in NC_013941


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

117) ECO55CA74_21290 in NC_017656


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

118) CDCO157_4318 in NC_017906


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  137 bits (503),  Expect = 5e-34, Method: Compositional matrix adjust.
 Identities = 85/185 (46%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTMFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L+MF+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFFQKVDEKILSPYRGFLEKNTEKDNVEFFERAAQKK-LGNET-ILKKD-------SL  141
            D   + K  +  L  YR++L K ++++ V+FFE A  K+  G+ET  +K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LVGGW  206
             ++GW
Sbjct  204  ALDGW  208

119) escR in NC_013716


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  131 bits (481),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 82/185 (45%), Positives = 139/185 (76%), Gaps = 9/185 (4%)

Query  31   GTSFLKISIVLGILKNALGIQQVPPNMALTSVSLILTIFIMSPIILQINDNISQEPINYT  90
            GT F+K+SIV+ +++NALG+QQ+P+NM+L SV+L+L++F+M PI+ +    + +E + + 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  91   DSDFYQKVDGKIISPYRIFLENNTNKENIDFFENVA-KKKLGNET-SLKKD-------SL  141
            D     K  +  +  YR +L + +++E ++FFEN   K++ G+ET ++K+D       S+
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSI  143

Query  142  FILLPAFTMGQLEAAFKIGFLLYLPFIAIDLIISNILLALGMMMVSPVTISIPFKILLFI  201
            F LLPA++++++ +AFKIGF LYLPF+ +DL++S++LLALGMMM+SPVTIS P+K++LF+
Sbjct  144  FALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFV  203

Query  202  LIGGW  206
             ++GW
Sbjct  204  ALDGW  208

120) epaP in NC_017663


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  131 bits (479),  Expect = 4e-32, Method: Compositional matrix adjust.
 Identities = 108/174 (63%), Positives = 143/174 (83%), Gaps = 5/174 (2%)

Query  1    MTLNGVALLLSMFVMMPVGKEIYYNSQNEnlsfnnvasvvnfvETGMSGYKSYLIKYSEP  60
            MTLN+VALLLSMFVM P+  + Y   ++E+++FN+++S+ + V+ G+ GY+ YLIKYS+ 
Sbjct  50   MTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDR  109

Query  61   ELVNFFEKIQ-----KVnssedneeifdddnisifsLLPAYALSEIKSAFIIGFYIYLPF  115
            ELV+FFE+ Q       ++   + +  + ++ SIF+LLPAYALSEIKSAF IGFY+YLPF
Sbjct  110  ELVQFFENAQLKRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPF  169

Query  116  vvvdlvissvlltlGMMMMSPVTISTPIKLILFVAMDGWTMLSKGLILQYFDLS  169
            VVVDLV+SSVLL+LGMMMMSPVTISTPIKL+LFVA+DGWT+LSKGLILQY D++
Sbjct  170  VVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQYMDIA  223

121) YE105_C0338 in NC_015224


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 89/198 (45%), Positives = 145/198 (74%), Gaps = 9/198 (4%)

Query  27   GTSFLKLSIVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVHARLQDEPLP-N  85
            GT F+K+SIVF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    ++DE +  N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  86   DLGALLYHIDEHALEPYRDFLQRNTDAAQVHFFNDI-------VQTKWPVRYRDTIKPNS  138
            D+++L  H+DE +L+ YRD+L + +D   V+FF++         +T    R +D I   S
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPS  142

Query  139  LLILMPAFTLSQLTEAFKIGLLLYLPFVAIDLIVSNILLAMGMMMVSPITISLPFKLLIF  198
            ++ L+PA++LS++  AFKIG+ LYLPFV +DL+VS++LLA+GMMM+SP+TIS P+KL++F
Sbjct  143  IFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLF  202

Query  199  ILIDGWGLLLGQLVGSYL  216
            + +DGW LL   L+  Y+
Sbjct  203  VALDGWTLLSKGLILQYM  220

122) HCH_03263 in NC_007645


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  128 bits (467),  Expect = 4e-31, Method: Compositional matrix adjust.
 Identities = 84/207 (41%), Positives = 146/207 (71%), Gaps = 11/207 (5%)

Query  17   ALIPFFAVMATSFVKIAVVLGLLRNALGIQQIPPNMALYGLAIILTAYIMAPVGISAYNE  76
            +L+PF+   +T FVK+++V+ ++RNALG+QQIP+NM+L ++A++L+ ++M P+   AY  
Sbjct  15   TLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVY  74

Query  77   LSTKPISLENTQELKALMDTASQPYKEFLQRHGSEDEQTFFHET------AAEIWPEDVA  130
            +    +++++   L   +D + + Y+++L + +  +   FF+++      + E   E V 
Sbjct  75   FEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEE--TETVK  132

Query  131  KG---LEKDSFFVLIPAFTASELTSAFEIGFLIYLPFLAIDLIISNILLAMGMMMVSPMT  187
            ++   +EK S+F L+PA++ SE+ SAF IGF +YLPF+ +DL++S++LLA+GMMM+SP+T
Sbjct  133  RDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVT  192

Query  188  ISLPFKLLLFVLMDGWTRLIHGLVLAY  214
            IS P+KL+LFV +DGWT L  GL+L Y
Sbjct  193  ISTPIKLVLFVALDGWTLLSKGLILQY  219

123) hrcR in NC_011983


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  126 bits (463),  Expect = 8e-31, Method: Compositional matrix adjust.
 Identities = 86/205 (42%), Positives = 141/205 (69%), Gaps = 7/205 (3%)

Query  19   SILPVIAVVATSFTKIAVVLLIVRNAIGIQQTPPNLLVFAIAIVLSAFVMNPILQQCWQV  78
            ++LP I   +T F K+++V+++VRNA+G+QQ P+N+ + ++A++LS FVM PI+++    
Sbjct  15   TLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVY  74

Query  79   LLRADVHFDTINGLAAGLSEVGAPLKAFMMKFSDEEVRQFFVNSS-QRIWGD-TATLPAS  136
            +   DV F+ I++L+  + E     + +++K+SD E+ QFF N+  +R  G+ T T+   
Sbjct  75   FEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRD  134

Query  137  PDDIT-----VLTPSFLVSELTRAFEIGFLLYLPFLMIDFAVSAILVALGMQMMSPTVVS  191
             D+I       L P++ +SE+  AF IGF LYLPF+++D+ VS++L+ALGM MMSP  +S
Sbjct  135  KDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIS  194

Query  192  TPFKLLLFVGVDGWRRLLEGLVLSY  216
            TP+KL+LFV++DGW  L  GL+L Y
Sbjct  195  TPIKLVLFVALDGWTLLSKGLILQY  219

124) Y11_35451 in NC_017564


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  125 bits (459),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 89/199 (45%), Positives = 146/199 (74%), Gaps = 11/199 (5%)

Query  27   GTSFLKLSIVLSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVHARLQDEPLP-N  85
            GT F+K+SIV+ ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    ++DE +  N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  86   DLGALLYHIDEHALEPYRDFLQRNTDAAQVHFFNDIVQTKWP--------VRYRDTIKPN  137
            D+++L  H+DE +L+ YRD+L + +D   V+FF++  Q K+          R +D I   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  138  SLLILMPAFTLSQLTEAFKIGLLLYLPFVAIDLIVSNILLAMGMMMVSPITISLPFKLLI  197
            S++ L+PA++LS++  AFKIG+ LYLPFV +DL+VS++LLA+GMMM+SP+TIS P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  198  FILIDGWGLLLGQLVGSYL  216
            F+ +DGW LL   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

125) A1122_03785 in NC_017168


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

126) epaP in NC_010159


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  27   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  85
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  86   DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  137
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  138  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  197
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  198  FVLVDGWSLVLGQLVGSYL  216
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

127) YPA_4012 in NC_008150


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

128) fliP1 in NC_005810


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

129) YPO0270 in NC_003143


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  27   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  85
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  86   DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  137
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  138  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  197
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  198  FVLVDGWSLVLGQLVGSYL  216
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

130) YPD4_0235 in NC_017154


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  27   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  85
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  86   DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  137
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  138  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  197
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  198  FVLVDGWSLVLGQLVGSYL  216
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

131) YPD8_0240 in NC_017160


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  27   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  85
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  86   DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  137
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  138  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  197
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  198  FVLVDGWSLVLGQLVGSYL  216
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

132) y0530 in NC_004088


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

133) YPN_3397 in NC_008149


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

134) YPDSF_3700 in NC_009381


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

135) YPZ3_0233 in NC_014029


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  27   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  85
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  86   DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  137
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  138  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  197
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  198  FVLVDGWSLVLGQLVGSYL  216
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

136) epaP in NC_009708


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  27   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  85
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  86   DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  137
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  138  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  197
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  198  FVLVDGWSLVLGQLVGSYL  216
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

137) YPTB0327 in NC_006155


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

138) YPTS_0351 in NC_010634


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

139) YPK_3902 in NC_010465


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  124 bits (455),  Expect = 3e-30, Method: Compositional matrix adjust.
 Identities = 85/199 (43%), Positives = 150/199 (76%), Gaps = 11/199 (5%)

Query  47   GTAFLKLSVVFSLLRNALGVQQVPPNIAIYGLALVLTIFIMAPVGLDVQARLQNEELS-N  105
            GT F+K+S+VF ++RNALG+QQ+P+N+++ ++AL+L++F+M P+  D    +++E+++ N
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  106  DIGALAHQIDQNALVPYRDFLQRNTDIEQVTFFNDIVQNKWP--------ERYRDSVKPD  157
            DI++L+ ++D+ +L  YRD+L + +D E V FF++  Q K+          R +D +   
Sbjct  84   DISSLSKHVDE-GLDGYRDYLIKYSDRELVQFFEN-AQLKRQYGEETETVKRDKDEIEKP  141

Query  158  SLLILMPAFTLSQLNEAFKIGLLLFLPFVAIDLIVSNILLAMGMMMVSPMTLSLPFKLLV  217
            S++ L+PA++LS+++ AFKIG+ L+LPFV +DL+VS++LLA+GMMM+SP+T+S P+KL++
Sbjct  142  SIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVL  201

Query  218  FVLVDGWSLVLGQLVGSYL  236
            FV +DGW+L+   L+  Y+
Sbjct  202  FVALDGWTLLSKGLILQYM  220

140) N646_0740 in NC_022349


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/204 (47%), Positives = 150/204 (74%), Gaps = 11/204 (5%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PFI   +T FVK+++VF ++RNALG+QQIP+NM+L ++A++LS+F+M P+  ++Y Y  +
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHI-RETEAIF--------FTDAARTLWPQKYV  131
            +D++++D +S+   ++ GL+ YR++L K   RE   +F        + + + T+  +K  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK--  135

Query  132  DRLESDSlllllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISl  191
            D +E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL+VS++LLA+GMMM+SP+TIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  192  pfklllfvllDGWTKLTHGLVLSY  215
            P+KL+LFV LDGWT L+ GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

141) VEA_003362 in NC_013456


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/204 (47%), Positives = 150/204 (74%), Gaps = 11/204 (5%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PFI   +T FVK+++VF ++RNALG+QQIP+NM+L ++A++LS+F+M P+  ++Y Y  +
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHI-RETEAIF--------FTDAARTLWPQKYV  131
            +D++++D +S+   ++ GL+ YR++L K   RE   +F        + + + T+  +K  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK--  135

Query  132  DRLESDSlllllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISl  191
            D +E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL+VS++LLA+GMMM+SP+TIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  192  pfklllfvllDGWTKLTHGLVLSY  215
            P+KL+LFV LDGWT L+ GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

142) VPBB_1532 in NC_019955


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/204 (47%), Positives = 150/204 (74%), Gaps = 11/204 (5%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PFI   +T FVK+++VF ++RNALG+QQIP+NM+L ++A++LS+F+M P+  ++Y Y  +
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHI-RETEAIF--------FTDAARTLWPQKYV  131
            +D++++D +S+   ++ GL+ YR++L K   RE   +F        + + + T+  +K  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK--  135

Query  132  DRLESDSlllllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISl  191
            D +E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL+VS++LLA+GMMM+SP+TIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  192  pfklllfvllDGWTKLTHGLVLSY  215
            P+KL+LFV LDGWT L+ GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

143) ssaR in NC_021848


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/204 (47%), Positives = 150/204 (74%), Gaps = 11/204 (5%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PFI   +T FVK+++VF ++RNALG+QQIP+NM+L ++A++LS+F+M P+  ++Y Y  +
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHI-RETEAIF--------FTDAARTLWPQKYV  131
            +D++++D +S+   ++ GL+ YR++L K   RE   +F        + + + T+  +K  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK--  135

Query  132  DRLESDSlllllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISl  191
            D +E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL+VS++LLA+GMMM+SP+TIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  192  pfklllfvllDGWTKLTHGLVLSY  215
            P+KL+LFV LDGWT L+ GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

144) ssaR in NC_021847


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/204 (47%), Positives = 150/204 (74%), Gaps = 11/204 (5%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PFI   +T FVK+++VF ++RNALG+QQIP+NM+L ++A++LS+F+M P+  ++Y Y  +
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHI-RETEAIF--------FTDAARTLWPQKYV  131
            +D++++D +S+   ++ GL+ YR++L K   RE   +F        + + + T+  +K  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK--  135

Query  132  DRLESDSlllllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISl  191
            D +E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL+VS++LLA+GMMM+SP+TIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  192  pfklllfvllDGWTKLTHGLVLSY  215
            P+KL+LFV LDGWT L+ GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

145) VP1672 in NC_004603


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  123 bits (449),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 94/204 (47%), Positives = 150/204 (74%), Gaps = 11/204 (5%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVKQ  80
            PFI   +T FVK+++VF ++RNALG+QQIP+NM+L ++A++LS+F+M P+  ++Y Y  +
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  81   HDISLEDSASVEGLIESGLQPYREFLKKHI-RETEAIF--------FTDAARTLWPQKYV  131
            +D++++D +S+   ++ GL+ YR++L K   RE   +F        + + + T+  +K  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK--  135

Query  132  DRLESDSlllllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISl  191
            D +E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL+VS++LLA+GMMM+SP+TIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  192  pfklllfvllDGWTKLTHGLVLSY  215
            P+KL+LFV LDGWT L+ GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

146) USDA257_c21640 in NC_018000


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  123 bits (448),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 87/215 (41%), Positives = 145/215 (68%), Gaps = 7/215 (3%)

Query  9    IPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVALILTVYVT  68
            I++I +++   L+P+ + + T F+K+SIV+ ++RNALG+QQ P+N+ L +VAL+L+++V 
Sbjct  5    ISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVM  64

Query  69   TPLVGEMYRTLSSEQVDVQSMDSMVRAADQLRAPLQAHLTRYTDENERQFFLQAT-ERIW  127
             P++ + Y  +  E+V  + + S+ +  D+     +  L +Y+D +  QFF +A   R  
Sbjct  65   WPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQY  124

Query  128  SEEA------RASVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVSTVLMAMG  181
            +EE+      +  +   S++ L+PA+  SE+  AF IGF LYLPF+V+DL+VS+VL+A+G
Sbjct  125  GEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALG  184

Query  182  MMMVSPTLISIPLKIFLFVAVNGWSRLMHGLILSY  216
            MMM+SP  IS P+K+ LFVA++GW+ L  GLIL Y
Sbjct  185  MMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQY  219

147) C770_GR4pC1264 in NC_019848


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  122 bits (447),  Expect = 1e-29, Method: Compositional matrix adjust.
 Identities = 91/222 (41%), Positives = 148/222 (67%), Gaps = 10/222 (4%)

Query  1    MGETTNLIPIIIIVSTIGLIPLAVVTMTGFLKISIVLFLIRNALGIQQSPPNLVLYGVAL  60
            MG+  +LI+++ + +   L+P+ + + T F+K+SIV+ ++RNALG+QQ P+N+ L +VAL
Sbjct  1    MGNDISLIALLAFST---LLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVAL  57

Query  61   ILTVYVTTPLVGEMYRTLSSEPVDVQSIDSMMRAADSLRVPLQTHLKRYTDENERQFFMQ  120
            +L+++V  P++ + Y  +  E V  + I S+ +  D      +  L +Y+D +  QFF +
Sbjct  58   LLSMFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFEN  117

Query  121  AT-ERIWSEEA------RAEVKTDSLLILVPAFVSSELTRAFEIGFLLYLPFLVIDLIVS  173
            A   R  +EE+      + E+   S++ L+PA+  SE+  AF IGF LYLPF+V+DL+VS
Sbjct  118  AQLKRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVS  177

Query  174  TVLMAMGMMMVSPTLISIPLKIFLFVAVNGWSRLMHGLILSY  215
            +VL+A+GMMM+SP  IS P+K+ LFVA++GW+ L  GLIL Y
Sbjct  178  SVLLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQY  219

148) M892_04535 in NC_022269


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 93/204 (46%), Positives = 148/204 (73%), Gaps = 11/204 (5%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVTQ  80
            PFI   +T FVK+++VF ++RNALG+QQIP+NM+L ++A++LS+F+M P+  ++Y Y  +
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  81   HEISLEDSESIEGLIESGLQPYREFLKKHI-RETESVF--------FTDAARTLWPQKYV  131
            ++++++D  S+   ++ GL+ YR++L K   RE    F        + + + T+  +K  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK--  135

Query  132  DRLESDSlllllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISl  191
            D +E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL+VS++LLA+GMMM+SP+TIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  192  pfklllfvllDGWTKLTHGLVLSY  215
            P+KL+LFV LDGWT L+ GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

149) VIBHAR_01726 in NC_009783


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 93/204 (46%), Positives = 148/204 (73%), Gaps = 11/204 (5%)

Query  21   PFIAMMATSFVKLAVVFSLLRNALGVQQIPPNMALYGLAIILSIFIMAPVGFETYDYVTQ  80
            PFI   +T FVK+++VF ++RNALG+QQIP+NM+L ++A++LS+F+M P+  ++Y Y  +
Sbjct  18   PFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFED  77

Query  81   HEISLEDSESIEGLIESGLQPYREFLKKHI-RETESVF--------FTDAARTLWPQKYV  131
            ++++++D  S+   ++ GL+ YR++L K   RE    F        + + + T+  +K  
Sbjct  78   EDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK--  135

Query  132  DRLESDSlllllPAFTVSELTRAFEIGFLLYLPFIAIDLIVSNILLAMGMMMVSPMTISl  191
            D +E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL+VS++LLA+GMMM+SP+TIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  192  pfklllfvllDGWTKLTHGLVLSY  215
            P+KL+LFV LDGWT L+ GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

150) yscR in NC_008791


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

151) YE105_P0026 in NC_015475


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

152) Y11_p0741 in NC_017565


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  121 bits (441),  Expect = 4e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

153) yscR in NC_010157


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

154) YPA_CD0018 in NC_008122


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

155) yscR in NC_005813


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

156) yscR in NC_003131


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

157) yscR in NC_017153


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

158) yscR in NC_017157


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

159) YPDSF_3973 in NC_009377


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

160) yscR in NC_014017


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

161) pYV0071 in NC_006153


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

162) YPTS_4289 in NC_010635


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  120 bits (440),  Expect = 5e-29, Method: Compositional matrix adjust.
 Identities = 93/199 (47%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFVKFAVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATQDYLQANEVSLT  86
            +T FVKF++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y++ ++V++ 
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NIESVEKFFDEGLAPYRMFLKQHIQAQEYSFFVDSTKQLWPKQYA----------DRLES  136
            +I S+ K  DEGL  YR +L +  + +   FF ++  QL  +QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENA--QL-KRQYGEETETVKRDKDEIEK  140

Query  137  DSLFILLPAFTVSELTRAFEIGFLIYLPFIVIDLVISNILLAMGMMMVSPMTISlpfkll  196
             S+F LLPA+++SE+  AF IGF +YLPF+V+DLV+S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISY  215
            LFV LDGWT L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

163) PADK2_17235 in NC_018080


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  119 bits (435),  Expect = 1e-28, Method: Compositional matrix adjust.
 Identities = 88/206 (43%), Positives = 150/206 (73%), Gaps = 13/206 (6%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PFI   +T F+K ++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y+ 
Sbjct  17   LPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFE  76

Query  80   NHDVSLNDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAER------  133
            ++DV++ND +S+ + +DEG+  YR++L +   +RE   F E+++     +Y+E       
Sbjct  77   DEDVTFNDISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQL--KRQYGEETETVKR  133

Query  134  ----LDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTI  189
                ++  S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++LLA+GMMM+SP+TI
Sbjct  134  DKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTI  193

Query  190  SlpfklllfvllDGWARLTHGLVISY  215
            S P+KL+LFV LDGW+ L+ GL++ Y
Sbjct  194  STPIKLVLFVALDGWTLLSKGLILQY  219

164) pscR in NC_017548


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 150/206 (73%), Gaps = 13/206 (6%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PFI   +T F+K ++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y+ 
Sbjct  17   LPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFE  76

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAER------  133
            ++DV+++D +S+ + +DEG+  YR++L +   +RE   F E+++     +Y+E       
Sbjct  77   DEDVTFNDISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQL--KRQYGEETETVKR  133

Query  134  ----LDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTI  189
                ++  S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++LLA+GMMM+SP+TI
Sbjct  134  DKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTI  193

Query  190  SlpfklllfvllDGWARLTHGLVISY  215
            S P+KL+LFV LDGW+ L+ GL++ Y
Sbjct  194  STPIKLVLFVALDGWTLLSKGLILQY  219

165) pscR in NC_017549


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 150/206 (73%), Gaps = 13/206 (6%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PFI   +T F+K ++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y+ 
Sbjct  17   LPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFE  76

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAER------  133
            ++DV+++D +S+ + +DEG+  YR++L +   +RE   F E+++     +Y+E       
Sbjct  77   DEDVTFNDISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQL--KRQYGEETETVKR  133

Query  134  ----LDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTI  189
                ++  S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++LLA+GMMM+SP+TI
Sbjct  134  DKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTI  193

Query  190  SlpfklllfvllDGWARLTHGLVISY  215
            S P+KL+LFV LDGW+ L+ GL++ Y
Sbjct  194  STPIKLVLFVALDGWTLLSKGLILQY  219

166) pscR in NC_002516


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 150/206 (73%), Gaps = 13/206 (6%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PFI   +T F+K ++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y+ 
Sbjct  17   LPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFE  76

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAER------  133
            ++DV+++D +S+ + +DEG+  YR++L +   +RE   F E+++     +Y+E       
Sbjct  77   DEDVTFNDISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQL--KRQYGEETETVKR  133

Query  134  ----LDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTI  189
                ++  S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++LLA+GMMM+SP+TI
Sbjct  134  DKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTI  193

Query  190  SlpfklllfvllDGWARLTHGLVISY  215
            S P+KL+LFV LDGW+ L+ GL++ Y
Sbjct  194  STPIKLVLFVALDGWTLLSKGLILQY  219

167) ssaR in NC_021577


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 150/206 (73%), Gaps = 13/206 (6%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PFI   +T F+K ++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y+ 
Sbjct  17   LPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFE  76

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAER------  133
            ++DV+++D +S+ + +DEG+  YR++L +   +RE   F E+++     +Y+E       
Sbjct  77   DEDVTFNDISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQL--KRQYGEETETVKR  133

Query  134  ----LDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTI  189
                ++  S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++LLA+GMMM+SP+TI
Sbjct  134  DKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTI  193

Query  190  SlpfklllfvllDGWARLTHGLVISY  215
            S P+KL+LFV LDGW+ L+ GL++ Y
Sbjct  194  STPIKLVLFVALDGWTLLSKGLILQY  219

168) pscR in NC_008463


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  119 bits (434),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 150/206 (73%), Gaps = 13/206 (6%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PFI   +T F+K ++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y+ 
Sbjct  17   LPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFE  76

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAER------  133
            ++DV+++D +S+ + +DEG+  YR++L +   +RE   F E+++     +Y+E       
Sbjct  77   DEDVTFNDISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQL--KRQYGEETETVKR  133

Query  134  ----LDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTI  189
                ++  S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++LLA+GMMM+SP+TI
Sbjct  134  DKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTI  193

Query  190  SlpfklllfvllDGWARLTHGLVISY  215
            S P+KL+LFV LDGW+ L+ GL++ Y
Sbjct  194  STPIKLVLFVALDGWTLLSKGLILQY  219

169) sctR in NC_005126


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  118 bits (430),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 87/201 (44%), Positives = 144/201 (72%), Gaps = 13/201 (6%)

Query  27   ATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGFATQDYLRQNEVSFS  86
            +T F+K+++VF ++RNALG+QQIP+NM++ ++A++L+++VM P+   +  Y+ +++V+F+
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NAQSVDKFVEEGLTPYRNFLKQHIKPSERTFFIDSTRQIWPSQYA----------DRLEP  136
            +  S+ K V+EGL  YR++L +        FF ++  +    QY+          D +E 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLK---RQYGEETETVKRDKDEIEK  140

Query  137  DSLLILLPAFTVSELTRAFEIGFLLYLPFIAIDLIISNILLAMGMMMVSPMTISlpfkll  196
             S++ LLPA+++SE+  AF IGF LYLPF+ +DL++S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWTRLTHGLVISYGD  217
            LFV LDGWT L+ GL++ Y D
Sbjct  201  LFVALDGWTLLSKGLILQYMD  221

170) G655_16715 in NC_020912


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  118 bits (431),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 87/206 (43%), Positives = 151/206 (74%), Gaps = 13/206 (6%)

Query  20   VPFIAVMATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLR  79
            +PFI   +T F+K ++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y+ 
Sbjct  17   LPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFE  76

Query  80   NHDVSLSDSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAER------  133
            ++DV+++D +S+ + +DEG+  YR++L +   +RE   F E+++  +  +Y+E       
Sbjct  77   DEDVTFNDISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQLKR--QYGEETETVKR  133

Query  134  ----LDPDSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTI  189
                ++  S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++LLA+GMMM+SP+TI
Sbjct  134  DKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTI  193

Query  190  SlpfklllfvllDGWARLTHGLVISY  215
            S P+KL+LFV LDGW+ L+ GL++ Y
Sbjct  194  STPIKLVLFVALDGWTLLSKGLILQY  219

171) Meso_0110 in NC_008254


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  118 bits (431),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 86/214 (41%), Positives = 149/214 (70%), Gaps = 8/214 (3%)

Query  13   TIIAVMALS-FIPFIVVMGTAFTKISIVLMLLRNAIGVQQAPSGLVINSIALTLTVFVMV  71
            ++IA++A+S ++PFI+  GT F K+SIV++++RNA+G+QQ PS + +NS+AL L++FVM 
Sbjct  6    SLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMW  65

Query  72   PVGNAIITQVQQQQLGFTGWENVSQLYSVVSEAFTGYLKQFSSPRELQFFMDAA-RKMWP  130
            P+ +      +++++ F +  ++S+      +++ +YL ++S    +QFF +A  ++   
Sbjct  66   PIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYG  125

Query  131  ETLH------GQITTDNVFILLPAHVTSELTRAFQIAFLIFLPFVVVDMVVSNILLAMGA  184
            E  +      ++I   ++F LLPA   SE+  AF+I+F ++LPFVVVD+VVS++LLA+G 
Sbjct  126  EETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGM  185

Query  185  MMVPPMLVSLPIKILLFVAADGWALLLHNLVLSY  218
            MM++P+ +S PIK++LFVA DGW+LL   L+L Y
Sbjct  186  MMMSPVTISTPIKLVLFVALDGWTLLSKGLILQY  219

172) ascR in NC_009350


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 94/220 (43%), Positives = 159/220 (73%), Gaps = 9/220 (4%)

Query  4    LPDELNLIVGlallallPFIAVMATSFVKLAVVFSLLRNALGVQQIPPNMAMYGLAIILS  63
            + ++++LI  LA+ +LLPFI   +T FVK+++VF ++RNALG+QQIP+NM++ ++A++LS
Sbjct  1    MGNDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLS  60

Query  64   IYVMAPVGFATQDYLRQNEVSLAKSESVEKFLDEGIAPYRDFLKKQIKPREHAFFIDSTK  123
            ++VM P+   +  Y+ +++V++    S+ K +DEG+  YRD+L K    RE   F+++++
Sbjct  61   MFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQ  119

Query  124  QLWP--------SKYADRLEPDSLLILLPAFTVSELSRAFEIGFLIYLPFIAIDLIISNI  175
              +          +  D +E  S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++
Sbjct  120  LKRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSV  179

Query  176  LLAMGMMMVSPMTISlpfklllfvllDGWARLTHGLVISY  215
            LLA+GMMM+SP+TIS P+KL+LFV LDGW+ L+ GL++ Y
Sbjct  180  LLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQY  219

173) REMIM1_PE00285 in NC_021909


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  117 bits (426),  Expect = 6e-28, Method: Compositional matrix adjust.
 Identities = 79/194 (41%), Positives = 130/194 (68%), Gaps = 9/194 (4%)

Query  31   FIKVSVVLFLVRNALGTQTIPPNIVLYAAALILTLFISAPVIEQTYIRIADPKLRYQTLD  90
            F+K S+V+ +VRNALG Q IP+N+ L + AL+L++F+  P+++++Y+ + D  + ++ + 
Sbjct  27   FVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFNDIS  86

Query  91   DWVTAAEEGREPLRDYLKKFTSEEQRRFFLSST-KQVWPEE----MRART---TPDDFAI  142
                  +EG +  RDYL K++  E  +FF ++  K+   EE     R +     P  FA+
Sbjct  87   SLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSIFAL  146

Query  143  LVPSFLISELKRAFEIGFLLYLPFICIDLIVTTILMAMGMSMVSPTVIAVPFKLFLFVTI  202
            L P++ +SE+K AF IGF LYLPF+ +DL+V+++L+A+GM M+SP  I+ P+KL LFV++
Sbjct  147  L-PAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFVAL  205

Query  203  DGWSQLMHGLVLSY  216
            DGW+ L  GL+L Y
Sbjct  206  DGWTLLSKGLILQY  219

174) sctR in NC_012962


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 86/201 (43%), Positives = 149/201 (75%), Gaps = 17/201 (8%)

Query  27   ATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGFATQDYLRQNEVSFS  86
            +T F+K+++VF ++RNALG+QQIP+NM++ ++A++L+++VM P+   +  Y+ +++V+F+
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   NAQSVEKFLEEGMAPYRNFLKQHIKSSERTF--FIDSTRQIWPSQYA----------NRL  134
            +  S+ K ++EG+  YR++L   IK S+R +  F+++++     QY+          + +
Sbjct  84   DISSLSKHVDEGLDGYRDYL---IKYSDRELVQFFENAQL--KRQYGEETETVKRDKDEI  138

Query  135  EPDSLLILLPAFTVSELTRAFEIGFLLYLPFIAIDLIISNILLAMGMMMVSPMTISlpfk  194
            E  S++ LLPA+++SE+  AF IGF LYLPF+ +DL++S++LLA+GMMM+SP+TIS P+K
Sbjct  139  EKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIK  198

Query  195  lllfvllDGWTRLTHGLVISY  215
            L+LFV LDGWT L+ GL++ Y
Sbjct  199  LVLFVALDGWTLLSKGLILQY  219

175) yscR in NC_007645


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  116 bits (422),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 90/220 (41%), Positives = 154/220 (70%), Gaps = 13/220 (5%)

Query  5    QAIPLIGTLVLLSLIPFIAIMTTSFIKLAVVFSLLRNALGIQQIPPNMALYGLAIVLSIY  64
            + I+LI+ L + +L+PFI    T F+K+++VF ++RNALG+QQIP+NM+L ++A++LS++
Sbjct  3    NDISLIALLAFSTLLPFIIASGTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMF  62

Query  65   IMAPVGYQIADTVKEKGFDLSQSESLKELANSAIDPMSEFLTKHSSEKERGFFLESAETL  124
            +M P+  +      + +  +++  SL    + ++D   ++L K S ++E   F+E+A+  
Sbjct  63   VMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEGLDGYRDYLIKYS-DRELVQFFENAQL-  120

Query  125  WPKEYA----------ARLDTNSMLVLVPSFTISELKSAFEIGFLLYLPFIAIDLIVSNI  174
              ++Y+            ++  S++ L+P++++SE+KSAF IGF LYLPF+ +DL+VS++
Sbjct  121  -KRQYGEETETVKRDKDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSV  179

Query  175  LLAMGMMMVSPMTISlpfklllfvllDGWTRLTHGLVLSY  214
            LLA+GMMM+SP+TIS P+KL+LFV LDGWT L+ GL+L Y
Sbjct  180  LLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGLILQY  219

176) yscR in NC_016642


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  114 bits (417),  Expect = 4e-27, Method: Compositional matrix adjust.
 Identities = 83/196 (43%), Positives = 133/196 (68%), Gaps = 7/196 (3%)

Query  28   TSFIKLSVVLLLVRNALGVQQIPPNMALNALAIILSGYIMLPVFLQTFEILEKGNYSIAT  87
            T F+K+S+V+++VRNALG+QQIP+NM+LN++A++LS ++M P+  +++  +E  + ++  
Sbjct  25   TCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFND  84

Query  88   VEDMKTTFVAAKGPLEEFLAKHADSKEKAFFLEAS-RQLWPAEVA------DSMSADSIA  140
            +  +      + +   ++L K +D     FF +A  ++    E        D +   SI 
Sbjct  85   ISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSIF  144

Query  141  ILLPAYTVSQLREAFEIGFLLYLPFLAIDLVVSNILLAMGMMMVSPLTISLPFKLFLFVA  200
             LLPAY++S+++ AF IGF LYLPF+ +DLVVS++LLA+GMMM+SP+TIS P+KL LFVA
Sbjct  145  ALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFVA  204

Query  201  VDGWSRLILGLIKTYV  216
            +DGW+ L  GLI  Y+
Sbjct  205  LDGWTLLSKGLILQYM  220

177) pscR in NC_011770


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  114 bits (414),  Expect = 5e-27, Method: Compositional matrix adjust.
 Identities = 84/199 (43%), Positives = 146/199 (74%), Gaps = 13/199 (6%)

Query  27   ATSFIKMTVVFSLLRNALGVQQIPPNMAMYGLAIILSLYVMAPVGFATRDYLRNHDVSLS  86
            +T F+K ++VF ++RNALG+QQIP+NM++ ++A++LS++VM P+   +  Y+ ++DV+++
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFN  83

Query  87   DSASVERFLDEGMAPYRNFLKRQIQEREHTFFMESTRQVWPSEYAER----------LDP  136
            D +S+ + +DEG+  YR++L +   +RE   F E+++     +Y+E           ++ 
Sbjct  84   DISSLSKHVDEGLDGYRDYLIK-YSDRELVQFFENAQL--KRQYGEETETVKRDKDEIEK  140

Query  137  DSLLILLPAFTVSELTRAFEIGFLIYLPFIAIDLIISNILLAMGMMMVSPMTISlpfkll  196
             S++ LLPA+++SE+  AF IGF +YLPF+ +DL++S++LLA+GMMM+SP+TIS P+KL+
Sbjct  141  PSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLV  200

Query  197  lfvllDGWARLTHGLVISY  215
            LFV LDGW+ L+ GL++ Y
Sbjct  201  LFVALDGWTLLSKGLILQY  219

178) bscR in NC_019382


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 138/204 (68%), Gaps = 15/204 (7%)

Query  26   TTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQAG  85
             T F+K+++V+ +VRNALG+QQ+P+NM+L ++AL+LS +VM P++H      +A     +
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMH------DAYVYFED  77

Query  86   ESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTA-RHLWGEEASR-----  139
            E  T     + ++   V+ G+   R ++++ S+    +FF  +  ++  GEE+       
Sbjct  78   EDVTFN--DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK  135

Query  140  -DLSEDNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISM  198
             ++   +++ L PA+ +SE+ +AF++GF LYLPF+++DL+VS++LLA+GMMM+SPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  199  PLKLFLFVMVDGWTRLIQGLVLSY  222
            P+KL LFV +DGWT L +GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

179) bscR in NC_002927


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 138/204 (68%), Gaps = 15/204 (7%)

Query  26   TTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQAG  85
             T F+K+++V+ +VRNALG+QQ+P+NM+L ++AL+LS +VM P++H      +A     +
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMH------DAYVYFED  77

Query  86   ESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTA-RHLWGEEASR-----  139
            E  T     + ++   V+ G+   R ++++ S+    +FF  +  ++  GEE+       
Sbjct  78   EDVTFN--DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK  135

Query  140  -DLSEDNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISM  198
             ++   +++ L PA+ +SE+ +AF++GF LYLPF+++DL+VS++LLA+GMMM+SPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  199  PLKLFLFVMVDGWTRLIQGLVLSY  222
            P+KL LFV +DGWT L +GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

180) bscR in NC_002928


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 138/204 (68%), Gaps = 15/204 (7%)

Query  26   TTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQAG  85
             T F+K+++V+ +VRNALG+QQ+P+NM+L ++AL+LS +VM P++H      +A     +
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMH------DAYVYFED  77

Query  86   ESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTA-RHLWGEEASR-----  139
            E  T     + ++   V+ G+   R ++++ S+    +FF  +  ++  GEE+       
Sbjct  78   EDVTFN--DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK  135

Query  140  -DLSEDNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISM  198
             ++   +++ L PA+ +SE+ +AF++GF LYLPF+++DL+VS++LLA+GMMM+SPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  199  PLKLFLFVMVDGWTRLIQGLVLSY  222
            P+KL LFV +DGWT L +GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

181) bscR in NC_018828


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  112 bits (408),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 82/204 (41%), Positives = 138/204 (68%), Gaps = 15/204 (7%)

Query  26   TTSFLKIAVVLALVRNALGVQQVPPNMALYGLALILSAYVMAPVVHRIGTEVQALTAQAG  85
             T F+K+++V+ +VRNALG+QQ+P+NM+L ++AL+LS +VM P++H      +A     +
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMH------DAYVYFED  77

Query  86   ESGTAAPMALDAVLGVVERGVAPLRAFMLRNSQPAQRDFFLRTA-RHLWGEEASR-----  139
            E  T     + ++   V+ G+   R ++++ S+    +FF  +  ++  GEE+       
Sbjct  78   EDVTFN--DISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDK  135

Query  140  -DLSEDNLLVLTPAFLVSELTAAFQLGFLLYLPFIIIDLIVSNILLAMGMMMVSPVTISM  198
             ++   +++ L PA+ +SE+ +AF++GF LYLPF+++DL+VS++LLA+GMMM+SPVTIS 
Sbjct  136  DEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIST  195

Query  199  PLKLFLFVMVDGWTRLIQGLVLSY  222
            P+KL LFV +DGWT L +GL+L Y
Sbjct  196  PIKLVLFVALDGWTLLSKGLILQY  219

182) NH44784_014541 in NC_021285


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  110 bits (399),  Expect = 9e-26, Method: Compositional matrix adjust.
 Identities = 82/203 (41%), Positives = 133/203 (66%), Gaps = 14/203 (6%)

Query  26   TTSFLKIAVVLTLVRNALGVQQVPPNMALYGLALILSAYVMGPVVMQIGDELRAPPAVAA  85
             T F+K+++V+ +VRNALG+QQ+P+NM+L ++AL+LS +VM P+       ++ +     
Sbjct  24   GTCFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPI-------MHDAYVYFE  76

Query  86   PGTPEPDRLEGILEAVARGAEPMRAFMLKNSRAEQRDFFLRTA-RGLWGEQQARNLKEDD  144
                  + + ++   V  G +  R +++K S  E  +FF  +  +   GE+     ++ D
Sbjct  77   DEDVTFNDISSLSKHVDEGLDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKD  136

Query  145  ------LLVLIPSFLLSELTAAFQIGFLLYLPFVIIDLIVSNILLAMGMMMVSPVTISMP  198
                  ++ L+P++ LSE+ +AF+IGF LYLPFV++DL+VS++LLA+GMMM+SPVTIS P
Sbjct  137  EIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTP  196

Query  199  LKLFLFVMVDGWTRLIQGLVLSY  221
            +KL LFV +DGWT L +GL+L Y
Sbjct  197  IKLVLFVALDGWTLLSKGLILQY  219

183) mlr8766 in NC_002678


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score =  105 bits (383),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 76/184 (42%), Positives = 121/184 (66%), Gaps = 7/184 (3%)

Query  40   LVRNALGTQTIPPNIALYAVALILTMFLSAPVVEQTYDRMTDPKLHYQTFDDWVSAAKSG  99
            +VRNALG Q IP+N++L +VAL+L+MF+  P+++++Y    D  + ++ +         G
Sbjct  36   MVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYVYFEDEDVTFNDISSLSKHVDEG  95

Query  100  SEPLRDHLKKFTNEEQRQFFLSST-EKVWPAE----MRAKATVDDLSI--LVPSFLISEL  152
             +  RD L K+++ E  QFF ++   +    E     R K  ++  SI  L+P++ +SE+
Sbjct  96   LDGYRDYLIKYSDRELVQFFENAQLKRQYGEETETVKRDKDEIEKPSIFALLPAYALSEI  155

Query  153  KRAFEIGFLLYLPFIVIDLIVTTILMAMGMSMVSPTLISVPFKLFVFVAIDGWSKLMHGL  212
            K AF IGF LYLPF+V+DL+V+++L+A+GM M+SP  IS P+KL +FVA+DGW+ L  GL
Sbjct  156  KSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTISTPIKLVLFVALDGWTLLSKGL  215

Query  213  VLSY  216
            +L Y
Sbjct  216  ILQY  219

184) sctR in NC_015713


> NC_004631_P2|31|G31|29143151|NP_806493.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2|-|26936..27610|spaP|t2792|surface 
presentation of antigens protein SpaP
Length=224

 Score = 87.0 bits (311),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 134/205 (66%), Gaps = 21/205 (10%)

Query  93   SYTKIVIVLSLVRNALGVQQAPPNQVLNGIALLMTIYVMFPTGVAMYNAGKNYIQNEAPA  152
             + K+ IV+ +VRNALG+QQ P+N  LN++ALL++++VM P     Y     Y+++E  +
Sbjct  26   CFVKFSIVFVMVRNALGLQQIPSNMTLNSVALLLSMFVMWPIMHDAYV----YFEDEDVT  81

Query  153  NLFTADTASYLVNVIDKSKDPLRDFLIRNMSTAHQKNFYQLAYRSLPADY----------  202
              F   ++  L + +D + D  RD+LI+  S  +  +F++ A   L  +Y          
Sbjct  82   --FNDISS--LSKHVDEGLDGYRDYLIKY-SDRELVQFFENA--QLKRQYGEETETVKRD  134

Query  203  RNELSPNDFIVLIPAYITSQIKGAFEIGVLIYLPFFVIDLVTSNILLAMGMMMlspltia  262
            ++E+    ++ L+PAY  S+IK+AF IG  +YLPF V+DLV S++LLA+GMMM+SP+TI+
Sbjct  135  KDEIEKPSIFALLPAYALSEIKSAFKIGFYLYLPFVVVDLVVSSVLLALGMMMMSPVTIS  194

Query  263  lplkllliVMVDGWTLIIQGLVLTY  287
             P+KL+L+V +DGWTL+ +GL+L Y
Sbjct  195  TPIKLVLFVALDGWTLLSKGLILQY  219