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PAthogenisity Island DataBase (PAI DB)

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Homologs of EXA25 gene of DQ437742

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) NCGM2_1805
( YP_005980050.1 )

hypothetical protein

NC_017549
(Pseudomonas aeruginosa NCGM2.S1)

3e-158

100

2) PA14_59630
( YP_792953.1 )

hypothetical protein

NC_008463
(Pseudomonas aeruginosa UCBPP-PA14)

3e-144

3) PA2223
( NP_250913.1 )

hypothetical protein

NC_002516
(Pseudomonas aeruginosa PAO1)

6e-50

4) PSPA7_2654
( YP_001348014.1 )

hypothetical protein

NC_009656
(Pseudomonas aeruginosa PA7)

3e-48

• Sequence Alignments

1) NCGM2_1805 in NC_017549


> DQ437742|31|G26|90569563|ABD94634.1|Pseudomonas_aeruginosa_6077|+|31697..32725|-|EXA25|hypothetical 
protein
Length=342

 Score =  550 bits (2077),  Expect = 3e-158, Method: Compositional matrix adjust.
 Identities = 342/342 (100%), Positives = 342/342 (100%), Gaps = 0/342 (0%)

Query  1    MAEPIRTDTMMTKLYFDLLSSPAEAHSSIQKSLSAQALSTTVPILEFPSETVYAYASYIS  60
            MAEPIRTDTMMTKLYFDLLSSPAEAHSSIQKSLSAQALSTTVPILEFPSETVYAYASYIS
Sbjct  1    MAEPIRTDTMMTKLYFDLLSSPAEAHSSIQKSLSAQALSTTVPILEFPSETVYAYASYIS  60

Query  61   ALSIGQRIDPAFTQSLTSAISNLAGRPVAVSDIYQKIHETTLRTPVEMGVRPNSITFEEY  120
            ALSIGQRIDPAFTQSLTSAISNLAGRPVAVSDIYQKIHETTLRTPVEMGVRPNSITFEEY
Sbjct  61   ALSIGQRIDPAFTQSLTSAISNLAGRPVAVSDIYQKIHETTLRTPVEMGVRPNSITFEEY  120

Query  121  QTAINQQAISMAQDMQDGDKGEKVEALQANMQFLYGQEINTDFVARNELAAGQRAKTVAI  180
            QTAINQQAISMAQDMQDGDKGEKVEALQANMQFLYGQEINTDFVARNELAAGQRAKTVAI
Sbjct  121  QTAINQQAISMAQDMQDGDKGEKVEALQANMQFLYGQEINTDFVARNELAAGQRAKTVAI  180

Query  181  VQGHITIGYGFDTFVHEESELNSLNLVDSTRQKVLPALQLSTSDPNFWSVYASLGQRLTD  240
            VQGHITIGYGFDTFVHEESELNSLNLVDSTRQKVLPALQLSTSDPNFWSVYASLGQRLTD
Sbjct  181  VQGHITIGYGFDTFVHEESELNSLNLVDSTRQKVLPALQLSTSDPNFWSVYASLGQRLTD  240

Query  241  DDGLLLFSAKARAVVQHLAGDQFSGRWEGLPAAVKTVVLDLYYQYGQWQKFPKFQQAIIS  300
            DDGLLLFSAKARAVVQHLAGDQFSGRWEGLPAAVKTVVLDLYYQYGQWQKFPKFQQAIIS
Sbjct  241  DDGLLLFSAKARAVVQHLAGDQFSGRWEGLPAAVKTVVLDLYYQYGQWQKFPKFQQAIIS  300

Query  301  HDWPEAIHELRNWNGMPNDPNLSVTKRLEERAKYLAISFNYE  342
            HDWPEAIHELRNWNGMPNDPNLSVTKRLEERAKYLAISFNYE
Sbjct  301  HDWPEAIHELRNWNGMPNDPNLSVTKRLEERAKYLAISFNYE  342

2) PA14_59630 in NC_008463


> DQ437742|31|G26|90569563|ABD94634.1|Pseudomonas_aeruginosa_6077|+|31697..32725|-|EXA25|hypothetical 
protein
Length=342

 Score =  504 bits (1900),  Expect = 3e-144, Method: Compositional matrix adjust.
 Identities = 303/342 (89%), Positives = 326/342 (96%), Gaps = 0/342 (0%)

Query  1    MAEAIRKDAMMTKLYFDLLNSPAEAHSSIQKSLSVQAISTTVPILEFPSETVYAYASYIN  60
            MAE+IR D+MMTKLYFDLL+SPAEAHSSIQKSLS QA+STTVPILEFPSETVYAYASYI+
Sbjct  1    MAEPIRTDTMMTKLYFDLLSSPAEAHSSIQKSLSAQALSTTVPILEFPSETVYAYASYIS  60

Query  61   ALSIGQRIDPAFTQSLTSAISNLAGRPIAVSDIYQKIHETTLRTPVEMGVRPNSITFEEY  120
            ALSIGQRIDPAFTQSLTSAISNLAGRP+AVSDIYQKIHETTLRTPVEMGVRPNSITFEEY
Sbjct  61   ALSIGQRIDPAFTQSLTSAISNLAGRPVAVSDIYQKIHETTLRTPVEMGVRPNSITFEEY  120

Query  121  QATINQQAINMVQDMQDGDKGEKVEALQANMQFLYGQEINTDFIARNELAAGQRAKTVAI  180
            Q++INQQAI+M QDMQDGDKGEKVEALQANMQFLYGQEINTDF+ARNELAAGQRAKTVAI
Sbjct  121  QTAINQQAISMAQDMQDGDKGEKVEALQANMQFLYGQEINTDFVARNELAAGQRAKTVAI  180

Query  181  VQGHITIGYGFDTFVHEASELNSLNLVGSTRQKVLPALQLSTSDPGFWSVYALLGQSLTD  240
            VQGHITIGYGFDTFVHE SELNSLNLV+STRQKVLPALQLSTSDP FWSVYA LGQ LTD
Sbjct  181  VQGHITIGYGFDTFVHEESELNSLNLVDSTRQKVLPALQLSTSDPNFWSVYASLGQRLTD  240

Query  241  DDGLLLFSAKARAVVQRIASNQFAGKWNGLPPAIKTVALDLYYQYGQTGNFPKFQQAINS  300
            DDGLLLFSAKARAVVQ++A++QF+G+W+GLP+A+KTV LDLYYQYGQ  +FPKFQQAI S
Sbjct  241  DDGLLLFSAKARAVVQHLAGDQFSGRWEGLPAAVKTVVLDLYYQYGQWQKFPKFQQAIIS  300

Query  301  HDWPAVIHELRNWNGVPNDPLQFITKRLEERAKYLAISFNYE  342
            HDWP  IHELRNWNG+PNDP   +TKRLEERAKYLAISFNYE
Sbjct  301  HDWPEAIHELRNWNGMPNDPNLSVTKRLEERAKYLAISFNYE  342

3) PA2223 in NC_002516


> DQ437742|31|G26|90569563|ABD94634.1|Pseudomonas_aeruginosa_6077|+|31697..32725|-|EXA25|hypothetical 
protein
Length=342

 Score =  190 bits (706),  Expect = 6e-50, Method: Compositional matrix adjust.
 Identities = 126/280 (45%), Positives = 183/280 (66%), Gaps = 11/280 (3%)

Query  62   QGGLTGQLTQVISQTAGRPVLVFDDYFKVHEVTIRTVAETGG-ANSISVSDLQVQLNQQI  120
            + ++T  LT  IS+ AGRPV V D Y K+HE T+RT  E G  +NSI+  + Q  +NQQ 
Sbjct  69   DPAFTQSLTSAISNLAGRPVAVSDIYQKIHETTLRTPVEMGVRPNSITFEEYQTAINQQA  128

Query  121  NTFIQDRIDGDKADKVSRLQSNISYLIEMGINIDFTARHELPPGGRGNRATIPTSDPNGE  180
             +  QD  DGDK++KV  LQ+N+ +L    IN DF AR+EL++G R++  +I       +
Sbjct  129  ISMAQDMQDGDKGEKVEALQANMQFLYGQEINTDFVARNELAAGQRAKTVAI------VQ  182

Query  181  SGVTIGYGFDVGQHDESGIQALNIAESTRKKIRPALGLKGANTATFQALAQLIPVLTDED  240
            + +TIGYGFD   H+ES +++LN+ +STR+K+ PAL L  ++       A L   LTD+D
Sbjct  183  GHITIGYGFDTFVHEESELNSLNLVDSTRQKVLPALQLSTSDPNFWSVYASLGQRLTDDD  242

Query  241  GLSLFTAKMIKVTDRMKV-KFQ-QWSTLPPAVKTIVTDLYYHYGEYSSFPNFETAISQSD  298
            GL LF+AK   V +++   +F  +W  LP+AVKT+V DLYY+YG+   FP+F+ AI   D
Sbjct  243  GLLLFSAKARAVVQHLAGDQFSGRWEGLPAAVKTVVLDLYYQYGQWQKFPKFQQAIISHD  302

Query  299  WLAAIRELRNWNGTPNSTDPSDGIARRLNNRADYLQRSLG  338
            W  AI+ELRNWNG PN  DP+ ++++RL++RA YL  S+ 
Sbjct  303  WPEAIHELRNWNGMPN--DPNLSVTKRLEERAKYLAISFN  340

4) PSPA7_2654 in NC_009656


> DQ437742|31|G26|90569563|ABD94634.1|Pseudomonas_aeruginosa_6077|+|31697..32725|-|EXA25|hypothetical 
protein
Length=342

 Score =  184 bits (684),  Expect = 3e-48, Method: Compositional matrix adjust.
 Identities = 129/300 (43%), Positives = 196/300 (66%), Gaps = 14/300 (4%)

Query  34   PITIYANQIPYYINDTWLANWSVAAR--TGMAQSLIDSINTTIGRPMVVSDHYFRGHEIS  91
            PI  ++++  Y    + ++  S++ R   + +QSL  +I+   GRP+ VSD Y + HE +
Sbjct  43   PILEFPSETVY-AYASYISALSIGQRIDPAFTQSLTSAISNLAGRPVAVSDIYQKIHETT  101

Query  92   IRTVPETGG-SNLITMSDLSAKLNSQINTFIQDRIDEDKEAKVALIQQSMESLAAEQINS  150
            +RT  E G  +N IT  +  + +N Q  +  QD  D DK  KV  +Q +M+ L +++IN+
Sbjct  102  LRTPVEMGVRPNSITFEEYQTAINQQAISMAQDMQDGDKGEKVEALQANMQFLYGQEINT  161

Query  151  DFTARHELPAGSRPNTVTIPQAGDSAITVGYGFDLGQHDEQELISMGIPVSTRDKVRPGL  210
            DF AR+EL+AG R++TV+I Q+    IT+GYGFD   H+E EL S+ +  STR+KV P+L
Sbjct  162  DFVARNELAAGQRAKTVAIVQG---HITIGYGFDTFVHEESELNSLNLVDSTRQKVLPAL  218

Query  211  GLSRTDPN---IYSALALIIPPFTDDDGMVLFSTKLNRVAGAVRS-KFSDVWSGLPPAVR  266
             LS +DPN   +Y++L+     +TDDDG++LFS+K   V   + + +FS+ W GLP+AV+
Sbjct  219  QLSTSDPNFWSVYASLG---QRLTDDDGLLLFSAKARAVVQHLAGDQFSGRWEGLPAAVK  275

Query  267  TVAVDIYYQYGQGKVFPNFEAAIRQHDWAAVVYELRNWDGHPNVPGDYRTNRLNDRADYL  326
            TV +D+YYQYGQ + FP+F+ AI  HDW+  + ELRNW+G PN P    T+RL++RA YL
Sbjct  276  TVVLDLYYQYGQWQKFPKFQQAIISHDWPEAIHELRNWNGMPNDPNLSVTKRLEERAKYL  335