Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
Extended-spectrum beta-lactamase PER-1 precursor |
NC_017162 (Acinetobacter baumannii 1656-2) |
5e-135 |
100 |
|
beta-lactamase |
NC_015703 (Runella slithyformis DSM 19594) |
3e-55 |
41 |
|
beta-lactamase class A |
NC_017770 (Solitalea canadensis DSM 3403) |
4e-54 |
43 |
|
beta-lactamase VEB-1 |
NC_010410 (Acinetobacter baumannii AYE) |
2e-50 |
41 |
|
VEB-3 extended-spectrum beta-lactamase |
NC_022078 (Klebsiella pneumoniae JM45) |
3e-50 |
41 |
|
beta-lactamase |
NC_013132 (Chitinophaga pinensis DSM 2588) |
1e-49 |
43 |
|
beta-lactamase |
NC_014364 (Spirochaeta smaragdinae DSM 11293) |
1e-48 |
42 |
|
beta-lactamase |
NC_015703 (Runella slithyformis DSM 19594) |
2e-48 |
43 |
|
beta-lactamase |
NC_019729 (Oscillatoria nigro-viridis PCC 7112) |
3e-45 |
43 |
|
beta-lactamase |
NC_016631 (Granulicella mallensis MP5ACTX8) |
5e-43 |
41 |
|
beta-lactamase |
NC_019703 (Geitlerinema sp. PCC 7407) |
1e-38 |
44 |
|
beta-lactamase |
NC_008536 (Candidatus Solibacter usitatus Ellin6076) |
1e-34 |
42 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_017162_R1' AND ph.id_pai_orf='30' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc