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Homologs of ssaD gene of NC_003198_P3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ssaD
( NP_456133.1 )

putative pathogenicity island protein

NC_003198
(Salmonella enterica CT18)

0.0

100

2) ssaD
( YP_216403.1 )

secretion system apparatus protein SsaD

NC_006905
(Salmonella enterica SC-B67)

0.0

100

3) ssaD
( NP_805066.1 )

pathogenicity island protein

NC_004631
(Salmonella enterica Ty2)

0.0

100

4) SEEH1578_16210
( YP_008247301.1 )

type III secretion system protein SsaD

NC_021810
(Salmonella enterica 41578)

0.0

5) SEEB0189_12560
( YP_008308827.1 )

type III secretion system protein SsaD

NC_021844
(Salmonella enterica CFSAN000189)

0.0

6) CFSAN002069_02025
( YP_008249265.1 )

type III secretion system protein SsaD

NC_021812
(Salmonella enterica CFSAN002069)

0.0

7) SPAB_01931
( YP_001588154.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

0.0

8) SE451236_12840
( YP_008265594.1 )

type III secretion system protein SsaD

NC_021820
(Salmonella enterica 08-1736)

0.0

9) ssaD
( YP_005237264.1 )

virulence protein

NC_016856
(Salmonella enterica 14028S)

0.0

10) CFSAN001921_10170
( YP_008255408.1 )

type III secretion system protein SsaD

NC_021814
(Salmonella enterica CFSAN001921)

0.0

11) STMMW_14001
( YP_005232454.1 )

putative pathogenicity island protein

NC_016854
(Salmonella enterica D23580)

0.0

12) ssaD
( NP_460360.1 )

virulence protein

NC_003197
(Salmonella enterica LT2)

0.0

13) ssaD
( YP_005181239.1 )

putative pathogenicity island protein

NC_016810
(Salmonella enterica SL1344)

0.0

14) ssaD
( YP_005242296.1 )

virulence protein

NC_016857
(Salmonella enterica ST4/74)

0.0

15) STMDT12_C14110
( YP_005247107.1 )

virulence protein

NC_016860
(Salmonella enterica T000240)

0.0

16) STU288_03295
( YP_007901764.1 )

type III secretion system protein SsaD

NC_021151
(Salmonella enterica U288)

0.0

17) ssaD
( YP_005251899.1 )

virulence protein

NC_016863
(Salmonella enterica UK-1)

0.0

18) ssaD
( YP_002226690.1 )

pathogenicity island protein

NC_011274
(Salmonella enterica 287/91)

0.0

19) ssaD
( YP_002243750.1 )

pathogenicity island protein

NC_011294
(Salmonella enterica P125109)

0.0

20) I137_05580
( YP_008380626.1 )

type III secretion system protein SsaD

NC_021984
(Salmonella enterica S06004)

0.0

21) CFSAN002050_13370
( YP_008260585.1 )

type III secretion system protein SsaD

NC_021818
(Salmonella enterica CFSAN002050)

0.0

22) STBHUCCB_13540
( YP_005216912.1 )

Type III secretion apparatus protein, YscD/HrpQ

NC_016832
(Salmonella enterica P-stx-12)

0.0

100

23) ssaD
( YP_002637892.1 )

pathogenicity island protein

NC_012125
(Salmonella enterica RKS4594)

0.0

100

24) TY21A_06425
( YP_007925589.1 )

secretion system apparatus SsaD

NC_021176
(Salmonella enterica Ty21a)

0.0

100

25) SSPA1356
( YP_002142195.1 )

pathogenicity island protein

NC_011147
(Salmonella enterica AKU12601)

0.0

26) ssaD
( YP_150709.1 )

pathogenicity island protein

NC_006511
(Salmonella enterica ATCC 9150)

0.0

27) SU5_02012
( YP_006087646.1 )

Type III secretion protein SsaD

NC_017623
(Salmonella enterica B182)

0.0

28) SeHA_C1529
( YP_002045399.1 )

type III secretion apparatus protein, YscD/HrpQ family

NC_011083
(Salmonella enterica SL476)

0.0

29) ssaD
( YP_005396794.1 )

pathogenicity island protein

NC_017046
(Salmonella enterica 798)

0.0

30) ssaD
( YP_008480883.1 )

putative pathogenicity island protein

NC_022221
(Salmonella enterica CDC1983-67)

0.0

31) SeD_A1947
( YP_002215735.1 )

type III secretion apparatus protein, YscD/HrpQ family

NC_011205
(Salmonella enterica CT_02021853)

0.0

32) ssaD
( YP_005212421.1 )

putative pathogenicity island protein

NC_016831
(Salmonella enterica RKS5078)

0.0

33) SNSL254_A1507
( YP_002040648.1 )

type III secretion apparatus protein YscD/HrpQ family

NC_011080
(Salmonella enterica SL254)

0.0

34) SN31241_24660
( YP_008360382.1 )

Type III secretion apparatus protein, YscD/HrpQ

NC_021902
(Salmonella enterica USMARC-S3124.1)

0.0

35) SeSA_A1492
( YP_002114409.1 )

type III secretion apparatus protein, YscD/HrpQ family protein

NC_011094
(Salmonella enterica CVM19633)

0.0

36) SeAg_B1777
( YP_002146646.1 )

type III secretion apparatus protein, YscD/HrpQ family

NC_011149
(Salmonella enterica SL483)

0.0

37) CFSAN001992_04615
( YP_007470681.1 )

type III secretion system protein SsaD

NC_020307
(Salmonella enterica CFSAN001992)

1e-178

38) SBOV13931
( YP_008505262.1 )

type III secretion apparatus protein, YscD/HrpQ family

NC_022241
(Salmonella enterica 3114)

8e-176

39) SARI_01586
( YP_001570622.1 )

hypothetical protein

NC_010067
(Salmonella enterica RSK2980)

6e-167

40) SG1283
( YP_454963.1 )

type III secretion apparatus

NC_007712
(Sodalis glossinidius morsitans)

4e-73

• Sequence Alignments

1) ssaD in NC_006905


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  658 bits (2487),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 403/403 (100%), Positives = 403/403 (100%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

2) ssaD in NC_003198


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  658 bits (2487),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 403/403 (100%), Positives = 403/403 (100%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

3) ssaD in NC_004631


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  658 bits (2487),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 403/403 (100%), Positives = 403/403 (100%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

4) SEEB0189_12560 in NC_021844


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  657 bits (2482),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 403/403 (100%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELAEYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELA+YQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHHDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH+DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

5) SEEH1578_16210 in NC_021810


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  657 bits (2483),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/403 (99%), Positives = 403/403 (100%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHHDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH+DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

6) CFSAN002069_02025 in NC_021812


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  657 bits (2483),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/403 (99%), Positives = 403/403 (100%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHHDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH+DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

7) SPAB_01931 in NC_010102


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  657 bits (2484),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 403/403 (100%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADN  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

8) SE451236_12840 in NC_021820


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

9) ssaD in NC_016856


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

10) STMMW_14001 in NC_016854


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

11) ssaD in NC_003197


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

12) ssaD in NC_016810


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

13) ssaD in NC_016857


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

14) STMDT12_C14110 in NC_016860


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

15) STU288_03295 in NC_021151


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

16) ssaD in NC_016863


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

17) CFSAN001921_10170 in NC_021814


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  655 bits (2475),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 401/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

18) ssaD in NC_011294


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  654 bits (2472),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADN  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

19) ssaD in NC_011274


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  654 bits (2472),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADN  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

20) I137_05580 in NC_021984


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  654 bits (2471),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 398/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADN  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIESGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIE+GLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

21) CFSAN002050_13370 in NC_021818


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  653 bits (2470),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKNSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADS  60
            MAYLMVNPK+SWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMGVLLSI+GQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

22) ssaD in NC_012125


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/399 (100%), Positives = 399/399 (100%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

23) STBHUCCB_13540 in NC_016832


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/399 (100%), Positives = 399/399 (100%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

24) TY21A_06425 in NC_021176


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 399/399 (100%), Positives = 399/399 (100%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

25) SU5_02012 in NC_017623


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 398/399 (99%), Positives = 399/399 (100%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHHDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH+DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

26) SeHA_C1529 in NC_011083


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  650 bits (2457),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 398/399 (99%), Positives = 399/399 (100%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHHDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH+DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

27) SSPA1356 in NC_011147


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 398/403 (99%), Positives = 401/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCA  180
            AGVFLIFIGGMGVLLSI+GQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYC+
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQLLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQ LLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

28) ssaD in NC_006511


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 398/403 (99%), Positives = 401/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AGVFLIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCA  180
            AGVFLIFIGGMGVLLSI+GQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYC+
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQLLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQ LLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

29) ssaD in NC_017046


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 397/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

30) SeD_A1947 in NC_011205


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  647 bits (2445),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADNLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+LFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

31) ssaD in NC_022221


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  647 bits (2444),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 394/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADNLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+LFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIESGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIE+GLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

32) ssaD in NC_016831


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  647 bits (2444),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 394/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADNLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+LFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIESGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIE+GLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

33) SNSL254_A1507 in NC_011080


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  647 bits (2445),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADNLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+LFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

34) SN31241_24660 in NC_021902


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  647 bits (2445),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 395/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADNLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+LFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

35) SeAg_B1777 in NC_011149


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  646 bits (2443),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 394/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKNSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVD  60
            MVNPK+SWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQADSLFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCASSEQ  180
            LIFIGGMGVLLSI+GQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYC+SSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

36) SeSA_A1492 in NC_011094


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  646 bits (2441),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 394/399 (99%), Positives = 398/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADSLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQADSLFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVKVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  120
            AGKARV+VNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  LIFIGGMGVLLSIGGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMGVLLSI+GQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

37) CFSAN001992_04615 in NC_020307


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  619 bits (2338),  Expect = 1e-178, Method: Compositional matrix adjust.
 Identities = 398/403 (99%), Positives = 402/403 (99%), Gaps = 0/403 (0%)

Query  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADS  60
            MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQADS
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVKVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120
            LFVDAGKARV+VNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  AgvflifiggmggllsiggQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180
            AGVFLIFIGGMG LLSI+GQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240
            SSEQMQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDD
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300
            IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360
            SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403
            LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

38) SBOV13931 in NC_022241


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  609 bits (2302),  Expect = 8e-176, Method: Compositional matrix adjust.
 Identities = 394/399 (99%), Positives = 397/399 (99%), Gaps = 0/399 (0%)

Query  1    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLTINEKIILREQADNLFVD  60
            MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPL+INEKIILREQAD+LFVD
Sbjct  5    MVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVD  64

Query  61   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAgvf  120
            AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF
Sbjct  65   AGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWLAGVF  124

Query  121  lifiggmggllsisgQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  180
            LIFIGGMG LLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ
Sbjct  125  LIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQ  184

Query  181  MQKVRATLESWGVMYRDGVICDDLLVREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  240
            MQKVRATLESWGVMYRDGVICDDLL+REVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD
Sbjct  185  MQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMD  244

Query  241  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  300
            QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL
Sbjct  245  QQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVL  304

Query  301  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  360
            DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK
Sbjct  305  DESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNK  364

Query  361  ERLRVGALLPNGGEIVHLSADVVTIKHYDTLINYPLDFK  399
            ERLRVGALLPNGGEIVHLSADVVTIKH DTLINYPLDFK
Sbjct  365  ERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

39) SARI_01586 in NC_010067


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  580 bits (2190),  Expect = 6e-167, Method: Compositional matrix adjust.
 Identities = 362/403 (90%), Positives = 389/403 (97%), Gaps = 0/403 (0%)

Query  1    MAYLMANLKSSWKIRFLGHLLQGREVWLNEGNLSLGEKGCDICIPLTINGKIVLREQEES  60
            MAYLM N KSSWKIRFLGH+LQGREVWLNEGNLSLGEKGCDICIPL+IN KI+LREQ +S
Sbjct  1    MAYLMVNPKSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADS  60

Query  61   LFVDAGKARVKVNGRRFNQNKPLPSSGVLQVAGVALAFGKEDCDLASYQIPVSSLGYWWl  120
            LFVDAGKARV+VNGRRFN NKPLPSSGVLQVAGVA+AFGK+DC+LA YQIPVS  GYWWL
Sbjct  61   LFVDAGKARVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGKQDCELADYQIPVSRSGYWWL  120

Query  121  agiflifiggigvllSIDGQPETVNDLPLRVKSLLDKSNIHYVRTQWKKDGSLQLSGYCS  180
            AG+FLIFIGG+GVLLSI GQPETVNDLPLRVK LLDKSNIHYVR+QWK DGSLQLSGYCS
Sbjct  121  AGVFLIFIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCS  180

Query  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDILIQMGYPHAEVSSEGPGSVLIHDN  240
            SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQD+LI+MGYPHAEVSSEGPGSVLIHD+
Sbjct  181  SSEQMQKVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDD  240

Query  241  IQMDQKWRKVQPLLADVPGLLHWRISNSHQSQGNDIISAIIENGLVGLVNVTPMRCSFVI  300
            IQMDQ+WRKVQPLLAD+PGLLHW+IS+SHQSQG+DIISAIIENGLVGLVNVTPMR SFVI
Sbjct  241  IQMDQQWRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVI  300

Query  301  SGVLDESHQRILQETLATLKKKYPALSIIYQDIAPSHDAGRYLPAPVAGFVQSRHGDYLL  360
            SGVLDESHQRILQETLA+LKKK PALS+IYQDIAPSHD ++YLPAPVAGFVQSRHG+YLL
Sbjct  301  SGVLDESHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLL  360

Query  361  LTDKERLRVGALLPDGGEIVHLSADVVTIKHSDTLINYPLDFK  403
            LT+KERLRVGALLP+GGEIVHLSADVVTIKH+DTLINYPLDFK
Sbjct  361  LTNKERLRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDFK  403

40) SG1283 in NC_007712


> NC_003198_P3|30|G28|16760516|NP_456133.1|Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18|-|18663..19874|ssaD|-|putative 
pathogenicity island protein
Length=403

 Score =  268 bits (1003),  Expect = 4e-73, Method: Compositional matrix adjust.
 Identities = 168/396 (43%), Positives = 272/396 (69%), Gaps = 3/396 (0%)

Query  2    NNQWQIRLLGGALHGREIKLPDTGLTLGERGCDVCLPLIGTARVALRIDAGKLYVDADGA  61
            ++ W+IR+LG  L+GRE+ L +  L+LGE+GCD+C+PL    ++ LR +A+ L+VDA+ A
Sbjct  9    KSSWKIRFLGHVLQGREVWLNEGNLSLGEKGCDICIPLAINEKIILREQADSLFVDAGKA  68

Query  62   AARVNGRRHRQGVALPATGILQTAGLTLAFGSPQDC-LAEMTLPARYGAFLWTgaiavvl  120
              RVNGRR     +LP++G+LQ AG+++AFG  QDC LA+  +P   +++ W  A   ++
Sbjct  69   RVRVNGRRFNPNKPLPSSGVLQVAGVAIAFGK-QDCELADYQIPVSRSGYWW-LAGVFLI  126

Query  121  latllaglwlsgaaRDSGPGIPGWVEMLLQQPGMDKVKAVWAADGVLTLSGYCAEGAQMG  180
            +   ++ L   ++  ++  ++P +V  LL+++ ++ V+A W  DG L LSGYC+ + QM 
Sbjct  127  FIGGMGVLLSISGQPETVNDLPLRVKFLLDKSNIHYVRAQWKEDGSLQLSGYCSSSEQMQ  186

Query  181  AARLRLASWgvvfrdrvvrgdLLARDVQDLLLQAGYTGARVRSTAPGEVCIQGDITMGKR  240
              R  L SWGV++RD V+ +DLL R+VQD+L++ GY  A V S +PG V I++DI M+++
Sbjct  187  KVRATLESWGVMYRDGVICDDLLIREVQDVLIKMGYPHAEVSSEGPGSVLIHDDIQMDQQ  246

Query  241  WTAVLPQLRLIPGLRRWHIENRHAVQSRAIISALRDNGLLAEISVTPVGDAFTLSGVLDA  300
            W  V P L  IPGL +W+I + H  Q+  IISA+ +NGL++ ++VTP+  +F +SGVLD 
Sbjct  247  WRKVQPLLADIPGLLHWQISHSHQSQGDDIISAIIENGLVGLVNVTPMRRSFVISGVLDE  306

Query  301  PGKARVIRLLDRLRTQFPGLALSYQAVPASADGAQRLPSPAAGIIHSRHGDYLMLENGVR  360
            + +  +   L  L+ + P+L+L YQ +++S D ++ LP+P AG+++SRHG+YL+L N  R
Sbjct  307  SHQRILQETLAALKKKDPALSLIYQDIAPSHDESKYLPAPVAGFVQSRHGNYLLLTNKER  366

Query  361  LQVGSQLPDGGEVIALTDRAISIHYRGTLINYPFDF  396
            L+VG+ LP+GGE++ L+   ++I   +TLINYP+DF
Sbjct  367  LRVGALLPNGGEIVHLSADVVTIKHNDTLINYPLDF  402