Homolog Viewer

PAthogenisity Island DataBase (PAI DB)

Home PAIs REIs Genomes Search Links

Homologs of SERP1530 gene of NC_002976_P2

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SERP1530
( YP_189095.1 )

hypothetical protein

NC_002976
(Staphylococcus epidermidis RP62A)

3e-36

100

2) SATW20_20570
( YP_005732041.1 )

phage protein

NC_017331
(Staphylococcus aureus TW20)

1e-34

• Sequence Alignments

1) SERP1530 in NC_002976


> NC_002976_P2|30|G30|57867453|YP_189095.1|Staphylococcus_epidermidis_RP62A|-|17937..18224|-|SERP1530|hypothetical 
protein
Length=95

 Score =  145 bits (532),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%)

Query  1   MHKEKDTYVVELINFKIYISKEDNNIEDIVYTENNTSLTKKEWDKEITSKLIFELISSRI  60
           MHKEKDTYVVELINFKIYISKEDNNIEDIVYTENNTSLTKKEWDKEITSKLIFELISSRI
Sbjct  1   MHKEKDTYVVELINFKIYISKEDNNIEDIVYTENNTSLTKKEWDKEITSKLIFELISSRI  60

Query  61  SSEQIITDMTQEIADLDEQIKELKGDNDKDVTEPK  95
           SSEQIITDMTQEIADLDEQIKELKGDNDKDVTEPK
Sbjct  61  SSEQIITDMTQEIADLDEQIKELKGDNDKDVTEPK  95

2) SATW20_20570 in NC_017331


> NC_002976_P2|30|G30|57867453|YP_189095.1|Staphylococcus_epidermidis_RP62A|-|17937..18224|-|SERP1530|hypothetical 
protein
Length=95

 Score =  139 bits (512),  Expect = 1e-34, Method: Compositional matrix adjust.
 Identities = 88/95 (93%), Positives = 93/95 (98%), Gaps = 0/95 (0%)

Query  1   MNKEKDSYVVELISFKIYISKADNNIEDIVYTENNTSLTKREWDKETTSKLIFELISSRI  60
           M+KEKD+YVVELI+FKIYISK DNNIEDIVYTENNTSLTK+EWDKE TSKLIFELISSRI
Sbjct  1   MHKEKDTYVVELINFKIYISKEDNNIEDIVYTENNTSLTKKEWDKEITSKLIFELISSRI  60

Query  61  SSEQIITDMTQEIADLDEQIKELKGENDKDVTEPK  95
           SSEQIITDMTQEIADLDEQIKELKG+NDKDVTEPK
Sbjct  61  SSEQIITDMTQEIADLDEQIKELKGDNDKDVTEPK  95