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PAthogenisity Island DataBase (PAI DB)

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Homologs of tnpB gene of U60177

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) ISHa1675 tnpB
( YP_665265.1 )

ISHa1675 transposase B

NC_008229
(Helicobacter acinonychis Sheeba)

0.0

2) HPAKL86_02065
( YP_007018492.1 )

transposase B

NC_019563
(Helicobacter pylori Aklavik86)

0.0

3) HPSAT_04360
( YP_005768516.1 )

transposase B

NC_017359
(Helicobacter pylori Sat464)

0.0

4) K750_03925
( YP_007982141.1 )

transposase IS605

NC_021217
(Helicobacter pylori UM037)

0.0

5) K750_06305
( YP_007982608.1 )

transposase IS605

NC_021217
(Helicobacter pylori UM037)

0.0

6) K750_06610
( YP_007982660.1 )

transposase IS605

NC_021217
(Helicobacter pylori UM037)

0.0

7) K750_07490
( YP_007982827.1 )

transposase IS605

NC_021217
(Helicobacter pylori UM037)

0.0

8) K750_07520
( YP_007982831.1 )

transposase IS605

NC_021217
(Helicobacter pylori UM037)

0.0

9) HP0438
( NP_207236.1 )

IS605 transposase (tnpB)

NC_000915
(Helicobacter pylori 26695)

0.0

10) HP0989
( NP_207780.1 )

IS605 transposase (tnpB)

NC_000915
(Helicobacter pylori 26695)

0.0

11) HP0997
( NP_207788.1 )

IS605 transposase (tnpB)

NC_000915
(Helicobacter pylori 26695)

0.0

12) HP1095
( NP_207886.1 )

IS605 transposase (tnpB)

NC_000915
(Helicobacter pylori 26695)

0.0

13) HP1534
( NP_208324.1 )

IS605 transposase (tnpB)

NC_000915
(Helicobacter pylori 26695)

0.0

14) C694_02225
( YP_006934360.1 )

IS605 transposase (tnpB)

NC_018939
(Helicobacter pylori 26695)

0.0

15) C694_05105
( YP_006934907.1 )

IS605 transposase (tnpB)

NC_018939
(Helicobacter pylori 26695)

0.0

16) C694_05145
( YP_006934913.1 )

IS605 transposase (tnpB)

NC_018939
(Helicobacter pylori 26695)

0.0

17) C694_05650
( YP_006935010.1 )

IS605 transposase (tnpB)

NC_018939
(Helicobacter pylori 26695)

0.0

18) C694_07950
( YP_006935460.1 )

IS605 transposase (tnpB)

NC_018939
(Helicobacter pylori 26695)

0.0

19) C695_02225
( YP_006892925.1 )

IS605 transposase (tnpB)

NC_018937
(Helicobacter pylori Rif1)

0.0

20) C695_05110
( YP_006893472.1 )

IS605 transposase (tnpB)

NC_018937
(Helicobacter pylori Rif1)

0.0

21) C695_05150
( YP_006893478.1 )

IS605 transposase (tnpB)

NC_018937
(Helicobacter pylori Rif1)

0.0

22) C695_05655
( YP_006893575.1 )

IS605 transposase (tnpB)

NC_018937
(Helicobacter pylori Rif1)

0.0

23) C695_07970
( YP_006894028.1 )

IS605 transposase (tnpB)

NC_018937
(Helicobacter pylori Rif1)

0.0

24) C730_02225
( YP_006935966.1 )

IS605 transposase (tnpB)

NC_018938
(Helicobacter pylori Rif2)

0.0

25) C730_05105
( YP_006936512.1 )

IS605 transposase (tnpB)

NC_018938
(Helicobacter pylori Rif2)

0.0

26) C730_05145
( YP_006936518.1 )

IS605 transposase (tnpB)

NC_018938
(Helicobacter pylori Rif2)

0.0

27) C730_05650
( YP_006936615.1 )

IS605 transposase (tnpB)

NC_018938
(Helicobacter pylori Rif2)

0.0

28) C730_07955
( YP_006937066.1 )

IS605 transposase (tnpB)

NC_018938
(Helicobacter pylori Rif2)

0.0

29) tnpB
( YP_005775549.1 )

IS605 transposase

NC_017366
(Helicobacter pylori F32)

1e-146

30) HFELIS_00630
( YP_004072737.1 )

TNB transposase b

NC_014810
(Helicobacter felis ATCC 49179)

2e-135

31) JJD26997_0256
( YP_001397481.1 )

ISHa1675 transposase B

NC_009707
(Campylobacter jejuni 269.97)

6e-115

32) JJD26997_1254
( YP_001398313.1 )

ISHa1675 transposase B

NC_009707
(Campylobacter jejuni 269.97)

6e-115

33) JJD26997_1726
( YP_001398700.1 )

ISHa1675 transposase B

NC_009707
(Campylobacter jejuni 269.97)

6e-115

34) Tnap_1583
( YP_003347071.1 )

transposase, IS605 OrfB family

NC_013642
(Thermotoga naphthophila RKU-10)

1e-63

35) HBHAL_3450
( YP_006181068.1 )

IS1341-type transposase

NC_017668
(Halobacillus halophilus DSM 2266)

2e-62

36) TM1044
( NP_228850.1 )

IS605 family transposase

NC_000853
(Thermotoga maritima MSB8)

3e-62

37) HBHAL_2639
( YP_006180264.1 )

IS1341-type transposase

NC_017668
(Halobacillus halophilus DSM 2266)

4e-62

38) Tmari_1048
( YP_007977397.1 )

transposase, IS605-TnpB family

NC_021214
(Thermotoga maritima MSB8)

4e-62

39) Tpet_1563
( YP_001245146.1 )

IS605 family transposase OrfB

NC_009486
(Thermotoga petrophila RKU-1)

4e-62

40) TRQ2_1629
( YP_001739648.1 )

IS605 family transposase OrfB

NC_010483
(Thermotoga sp. RQ2)

4e-62

41) TRQ2_1764
( YP_001739778.1 )

IS605 family transposase OrfB

NC_010483
(Thermotoga sp. RQ2)

5e-62

42) HBHAL_1899
( YP_006179538.1 )

IS1341-type transposase

NC_017668
(Halobacillus halophilus DSM 2266)

1e-61

43) Pmob_0757
( YP_001567804.1 )

IS605 family transposase OrfB

NC_010003
(Petrotoga mobilis SJ95)

2e-58

44) BTG_31293
( YP_006593863.1 )

transposase

NC_018486
(Bacillus thuringiensis HD-771)

9e-57

45) Cyast_0050
( YP_007163683.1 )

transposase, IS605 OrfB family

NC_019778
(Cyanobacterium stanieri PCC 7202)

2e-56

46) Hipma_0670
( YP_004339699.1 )

transposase, IS605 OrfB family

NC_015318
(Hippea maritima DSM 10411)

3e-56

47) Rumal_3660
( YP_004089985.1 )

transposase, IS605 OrfB family

NC_014824
(Ruminococcus albus 7)

3e-56

48) Cyan10605_1871
( YP_007162015.1 )

transposase, IS605 OrfB family

NC_019776
(Cyanobacterium aponinum PCC 10605)

6e-56

49) Pmob_1254
( YP_001568292.1 )

IS605 family transposase OrfB

NC_010003
(Petrotoga mobilis SJ95)

8e-55

50) Rumal_3507
( YP_004089838.1 )

transposase, IS605 OrfB family

NC_014824
(Ruminococcus albus 7)

2e-54

51) Calkr_2266
( YP_004027340.1 )

transposase, is605 orfb family

NC_014721
(Caldicellulosiruptor kristjanssonii 177R1B)

1e-51

52) Pmob_0263
( YP_001567330.1 )

IS605 family transposase OrfB

NC_010003
(Petrotoga mobilis SJ95)

7e-51

53) BT9727_3437
( YP_037758.1 )

IS605 family transposase

NC_005957
(Bacillus thuringiensis 97-27)

1e-48

54) ABC2013
( YP_175509.1 )

IS605 family transposase

NC_006582
(Bacillus clausii KSM-K16)

9e-44

55) BBR47_09880
( YP_002770469.1 )

transposase orfB for insertion sequence element IS200/IS605 group

NC_012491
(Brevibacillus brevis NBRC 100599)

2e-43

• Sequence Alignments

1) ISHa1675 tnpB in NC_008229


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  671 bits (2537),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 411/427 (97%), Positives = 420/427 (99%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKESIPKPTIIKK  180
            ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKE+IPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLKQAQRRLSKKVKGSNNRKKQAKKVARL  240
            AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKL +AQRRLSKKVKGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMKTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLM+TYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  TQRKRKTLLGIDRFFPSSQLCSYCGFNTGKKYERITQFTCPNCKITHHRDYNASVNIRNY  360
            +QRK KTLLGIDRFFPSSQLCSYCGFNTGKK E IT+FTCP+C+ITHHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHHTNERIKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHKIKIDKSRVGIIRTDYAH T+ERIKACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

2) HPAKL86_02065 in NC_019563


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  650 bits (2458),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 407/427 (96%), Positives = 423/427 (99%), Gaps = 0/427 (0%)

Query  1    MLNAVRFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNA++FRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDHFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYD+FFSKRARYPKFKSKKNAKQSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AIGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKLKGSNNRKKQAKKVARL  240
            A+GLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKK+KGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACKNTREDYLHKISDEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLEYK  300
            HLAC NTR+DYLHKIS+EITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLGIDKFFPSSQLCSYCGVNTGKKHEGITQFTCPHCQITHHRDYNASVNIRNY  360
            AQRK+KTLLGID+FFPSSQLCSYCG NTGKKHE IT+FTCPHC+ITHHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDERHKIKIDKSRVGIIRTDYAHYTNERIKACGASSNGVISKYGNILDLASYGAMK  420
            ALGMLD+RHKIKIDKSRVGIIRTDYAHYT+ERIKACGASSNGVISKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

3) HPSAT_04360 in NC_017359


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  650 bits (2456),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 407/427 (96%), Positives = 421/427 (99%), Gaps = 0/427 (0%)

Query  1    MLNAVKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKALTQIK  60
            MLNA+KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQK LTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFAKRARYPKFKSKKNAKQSFAIPQNIEIKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFF+KRARYPKFKSKKNAKQSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AIGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKLKGSNNRKKQAKKVARL  240
            A+GLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKK+KGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACKNTREDYLHKISDEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLEYK  300
            HLAC NTR+DYLHKIS+EITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLGIDRFFPSSQLCSYCGVNTGKKHEGITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLLGIDRFFPSSQLCSYCG NTGKKHE ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDERHKIKIDKSRVGIIRTDYAHYTNERIKACGASSNGVISKYGNILDLASYGAMN  420
            ALGMLD+RHKIKIDKSRVGIIRTDYAHYT+ERIKACGASSNGVISKYGNILDLASYGAM+
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

4) K750_07520 in NC_021217


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 408/427 (96%), Positives = 423/427 (99%), Gaps = 0/427 (0%)

Query  1    MLNAVKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNA+KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNARQSFAIPQNIEIKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNA+QSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRNLPKDSVIKQAFISCIADQYFCSISYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240
            AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMKTYHSKSLANASWGKFLTMLKYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLM+TYHSKSLANASWGKFLTMLKYK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKAKTLLGIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKITHHRDYNASVNIRNY  360
            AQRKAKTLLGIDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ITHHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDERHKVKIDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGSILDLASYGAMK  420
            ALGMLD+RHK+KIDK+RVGIIR+DY+H T+E +KACGASSNGV SKYG+ILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

5) K750_07490 in NC_021217


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 408/427 (96%), Positives = 423/427 (99%), Gaps = 0/427 (0%)

Query  1    MLNAVKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNA+KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNARQSFAIPQNIEIKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNA+QSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRNLPKDSVIKQAFISCIADQYFCSISYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240
            AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMKTYHSKSLANASWGKFLTMLKYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLM+TYHSKSLANASWGKFLTMLKYK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKAKTLLGIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKITHHRDYNASVNIRNY  360
            AQRKAKTLLGIDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ITHHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDERHKVKIDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGSILDLASYGAMK  420
            ALGMLD+RHK+KIDK+RVGIIR+DY+H T+E +KACGASSNGV SKYG+ILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

6) K750_06610 in NC_021217


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 408/427 (96%), Positives = 423/427 (99%), Gaps = 0/427 (0%)

Query  1    MLNAVKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNA+KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNARQSFAIPQNIEIKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNA+QSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRNLPKDSVIKQAFISCIADQYFCSISYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240
            AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMKTYHSKSLANASWGKFLTMLKYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLM+TYHSKSLANASWGKFLTMLKYK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKAKTLLGIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKITHHRDYNASVNIRNY  360
            AQRKAKTLLGIDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ITHHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDERHKVKIDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGSILDLASYGAMK  420
            ALGMLD+RHK+KIDK+RVGIIR+DY+H T+E +KACGASSNGV SKYG+ILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

7) K750_06305 in NC_021217


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 408/427 (96%), Positives = 423/427 (99%), Gaps = 0/427 (0%)

Query  1    MLNAVKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNA+KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNARQSFAIPQNIEIKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNA+QSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRNLPKDSVIKQAFISCIADQYFCSISYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240
            AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMKTYHSKSLANASWGKFLTMLKYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLM+TYHSKSLANASWGKFLTMLKYK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKAKTLLGIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKITHHRDYNASVNIRNY  360
            AQRKAKTLLGIDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ITHHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDERHKVKIDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGSILDLASYGAMK  420
            ALGMLD+RHK+KIDK+RVGIIR+DY+H T+E +KACGASSNGV SKYG+ILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

8) K750_03925 in NC_021217


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  648 bits (2448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 408/427 (96%), Positives = 423/427 (99%), Gaps = 0/427 (0%)

Query  1    MLNAVKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNA+KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNARQSFAIPQNIEIKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNA+QSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRNLPKDSVIKQAFISCIADQYFCSISYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240
            AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMKTYHSKSLANASWGKFLTMLKYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLM+TYHSKSLANASWGKFLTMLKYK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKAKTLLGIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKITHHRDYNASVNIRNY  360
            AQRKAKTLLGIDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ITHHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDERHKVKIDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGSILDLASYGAMK  420
            ALGMLD+RHK+KIDK+RVGIIR+DY+H T+E +KACGASSNGV SKYG+ILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

9) C694_02225 in NC_018939


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

10) C694_05105 in NC_018939


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

11) C694_05145 in NC_018939


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

12) C694_05650 in NC_018939


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

13) C694_07950 in NC_018939


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

14) HP0438 in NC_000915


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

15) HP0989 in NC_000915


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

16) HP0997 in NC_000915


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

17) HP1095 in NC_000915


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

18) HP1534 in NC_000915


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

19) C695_02225 in NC_018937


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

20) C695_05110 in NC_018937


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

21) C695_05150 in NC_018937


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

22) C695_05655 in NC_018937


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

23) C695_07970 in NC_018937


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

24) C730_02225 in NC_018938


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

25) C730_05105 in NC_018938


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

26) C730_05145 in NC_018938


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

27) C730_05650 in NC_018938


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

28) C730_07955 in NC_018938


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  638 bits (2411),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 402/427 (95%), Positives = 418/427 (98%), Gaps = 0/427 (0%)

Query  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60
            MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKT  120
            +QEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE KT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQYFCSLSYetkepipkptiikk  180
            ETQTIALPKFKEGIKAKLHR+LPKDSVIKQAFISCIADQYFCS+SYETKEPIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL  240
            AVGLDMGLRTLIVTSDKI YPHIRFYQKLEKKLTKAQRRLSKKVK+SNNRKKQAKKV+RL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTRDDYLHKISNEITNQYDLIGVETLNVK+LMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDRFFPSSQLCSYCGVNTGKKHESITKFTCPHCKTTHHRDYNASVNIRNY  360
            AQRK+KTLL+IDRFFPSSQLCSYCG NTGKKHE+ITKFTCPHC+ THHRDYNASVNIRNY
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  ALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASSNGVSSKYGNILDLASYGAMK  420
            ALGMLDDRHK+K DK+RVGIIR+DY+H T+E +KACGASSNGV SKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  421  QEKAQSL  427
            QEKAQSL
Sbjct  421  QEKAQSL  427

29) tnpB in NC_017366


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  512 bits (1932),  Expect = 1e-146, Method: Compositional matrix adjust.
 Identities = 347/427 (82%), Positives = 366/427 (86%), Gaps = 50/427 (11%)

Query  1    MLSAVKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQCAKGIKETYFTMQKVLTQIK  60
            ML+A+KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQ AKGIKETYFTMQKVLTQIK
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   RQEKYHYPNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120
            +QEKYHY NECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSLSYEtkdpipkptiikk  180
            ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCS+SYETK+PIPKPTIIKK
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  atGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLIKAQRRLSKKIKGSNNRKKQAKKVARL  240
            A GLDMGLRTLIVTSDKIEYPHIRFYQKLEKKL KAQRRLSKK+KGSNNRKKQAKKVARL
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HLACSNTREDYLHKISDEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLEYK  300
            HLACSNTR+DYLHKIS+EITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTML YK
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYK  300

Query  301  AQRKGKTLLSIDKFFPSSQL-------------------CSYCGVN--------------  327
            AQRK+KTLL+ID+FFPSSQL                   C+ C +               
Sbjct  301  AQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  328  ------------TGKKHEGI-----TNYTNERIKACGASPNGVISKYGNILDLASYGAMK  370
                         +K + GI     ++YT+ERIKACGAS+NGVISKYGNILDLASYGAMK
Sbjct  361  ALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAMK  420

Query  371  QEKAQSL  377
            QEKAQSL
Sbjct  421  QEKAQSL  427

30) HFELIS_00630 in NC_014810


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  475 bits (1791),  Expect = 2e-135, Method: Compositional matrix adjust.
 Identities = 271/428 (64%), Positives = 353/428 (83%), Gaps = 11/428 (2%)

Query  1    MLKAIKFRIYPSVEQKTLIHKHFGCARVIYNYFLAYRQKQYALGIKENYFSMQKVLTTLK  60
            ML+AIKFRIYP+ +QK LI KHFGC+RV+YNYFL YRQKQYA GIKE YF+MQKVLT +K
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   KQESYAYLSECNSQSLQMALRQLTTAFDKFFSKLADYPRFKSKKHSKQSFCVPQHLRVDL  120
             QE Y YL+ECNSQSLQMALRQL +A+D+FFSK A YP+FKSKK++KQSF +PQ++ +  
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  121  GNNQVKLPKFKEAIKAKFHRHLPTNSIVKQGFISCVADKYYLSVSYEDNKPEPKPTTIRK  180
              + + LPKFKE+IKAK+HR+LP +S++KQ+FISC+AD+Y+ S+SYE + P PKPT I+K
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  181  AVGLDMGLESLVIASNGVFYPYKKFFQNLQTKLTKAQRRLSKKLKGSSNRKKQAKKVAQI  240
            AVGLDMGL +L+++S+ + YP  +F+Q+L+ KLTKAQRRLSKK+KGS+NRKKQAKKVA++
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  241  HASIRNSREDYLHKISSEITNQYDLIAVETLKVRNLVKNHKLAKSIANASWSRLISLLEY  300
            H +  N+R+DYLHKIS+EITNQYDLI+VETL+V+ L++    +KS+ANASW++++++L Y
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTMLKY  299

Query  301  KAGWKGKTLIKIDQYFPSSQICCTCGSNTGKKPLRIRNFVCPCCQTHHHRDLNASINIRN  360
            KA +K+KTL+ ID++FPSSQ+C  CG NTGKK   I +F CP C+  HHRD NAS+NIRN
Sbjct  300  KAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRN  359

Query  361  YALGMLDERHAIKVDKTRVGITRS-Y---------ACGDSANGAVTKYGYILDTASYGSL  410
            YALGMLD+RH IK+DK+RVGI R+ Y         ACG S+NG ++KYG ILD ASYG++
Sbjct  360  YALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAM  419

Query  411  KQEAHPSL  418
            KQE   SL
Sbjct  420  KQEKAQSL  427

31) JJD26997_0256 in NC_009707


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  407 bits (1531),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 271/423 (65%), Positives = 335/423 (80%), Gaps = 15/423 (3%)

Query  1    MLSAVKYRIYPTKAQKELIHKHFGCARVVYNHFLDYRQKQFAKGIKETYFTMQKELTLLK  60
            ML+A+K+RIYP   QKELI KHFGC+RVVYN FLDYRQKQ+AKGIKETYFTMQK LT +K
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   KQDEYKYLNECASQSLQMALRQLVTALDNFFAKRAKYPNFKSKKNARQSYAIPQN--IKL  118
             Q+ Y YLNEC SQSLQMALRQLV+A DNFF+KRA+YP+FKSKKNA+QS+AIPQN  IK 
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  119  DNKKVYASKFTEGIKTKIHRKLDKDCIIKQAFISKIADEYYIAISYENNKSLPKPKVIEN  178
            + + +  +KF EGIK+K+HR L KD +IKQAFIS IAD+Y+ +ISYE + ++PKP +I +
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  179  AVGLDMGLENLIIRSDCVIYKNHKFLQDKENkliklqkqlskkqkGSNNYAKTKLKVAKA  238
            AVGLDMGL  LI+ SD + Y + +F Q  E+KL K Q++LSKK KGSNN  K   KVA+ 
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  239  HQKITRARDDYLHKISDEITNLYDFIAVENLNIKGLIKNKHLSKSIANASWGKFINLLTY  298
            H   + +RDDYLHKIS+EITN YD+I+VE LN+KGL++  H SKS+ANASWGKF+ +L Y
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTMLKY  299

Query  299  KAENKGKTLMQIDKFFPSSQICSNCGSNTGKKPLHIRSFTCPNCNTKHHRDLNASINIRN  358
            KA+ K+KTL+ ID+FFPSSQ+CS CG NTGKK  +I  FTCP+CN  HHRD NAS+NIRN
Sbjct  300  KAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRN  359

Query  359  YALGIIDDRYKIKLDKSRVGITQS-Y---------ACKDSSSGV-SKYGYILD-TSYLSL  406
            YALG++DDR KIK+DKSRVGI ++ Y         AC  SS+GV SKYG ILD +SY ++
Sbjct  360  YALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAM  419

Query  407  KQE  409
            KQE
Sbjct  420  KQE  422

32) JJD26997_1254 in NC_009707


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  407 bits (1531),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 271/423 (65%), Positives = 335/423 (80%), Gaps = 15/423 (3%)

Query  1    MLSAVKYRIYPTKAQKELIHKHFGCARVVYNHFLDYRQKQFAKGIKETYFTMQKELTLLK  60
            ML+A+K+RIYP   QKELI KHFGC+RVVYN FLDYRQKQ+AKGIKETYFTMQK LT +K
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   KQDEYKYLNECASQSLQMALRQLVTALDNFFAKRAKYPNFKSKKNARQSYAIPQN--IKL  118
             Q+ Y YLNEC SQSLQMALRQLV+A DNFF+KRA+YP+FKSKKNA+QS+AIPQN  IK 
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  119  DNKKVYASKFTEGIKTKIHRKLDKDCIIKQAFISKIADEYYIAISYENNKSLPKPKVIEN  178
            + + +  +KF EGIK+K+HR L KD +IKQAFIS IAD+Y+ +ISYE + ++PKP +I +
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  179  AVGLDMGLENLIIRSDCVIYKNHKFLQDKENkliklqkqlskkqkGSNNYAKTKLKVAKA  238
            AVGLDMGL  LI+ SD + Y + +F Q  E+KL K Q++LSKK KGSNN  K   KVA+ 
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  239  HQKITRARDDYLHKISDEITNLYDFIAVENLNIKGLIKNKHLSKSIANASWGKFINLLTY  298
            H   + +RDDYLHKIS+EITN YD+I+VE LN+KGL++  H SKS+ANASWGKF+ +L Y
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTMLKY  299

Query  299  KAENKGKTLMQIDKFFPSSQICSNCGSNTGKKPLHIRSFTCPNCNTKHHRDLNASINIRN  358
            KA+ K+KTL+ ID+FFPSSQ+CS CG NTGKK  +I  FTCP+CN  HHRD NAS+NIRN
Sbjct  300  KAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRN  359

Query  359  YALGIIDDRYKIKLDKSRVGITQS-Y---------ACKDSSSGV-SKYGYILD-TSYLSL  406
            YALG++DDR KIK+DKSRVGI ++ Y         AC  SS+GV SKYG ILD +SY ++
Sbjct  360  YALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAM  419

Query  407  KQE  409
            KQE
Sbjct  420  KQE  422

33) JJD26997_1726 in NC_009707


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  407 bits (1531),  Expect = 6e-115, Method: Compositional matrix adjust.
 Identities = 271/423 (65%), Positives = 335/423 (80%), Gaps = 15/423 (3%)

Query  1    MLSAVKYRIYPTKAQKELIHKHFGCARVVYNHFLDYRQKQFAKGIKETYFTMQKELTLLK  60
            ML+A+K+RIYP   QKELI KHFGC+RVVYN FLDYRQKQ+AKGIKETYFTMQK LT +K
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIK  60

Query  61   KQDEYKYLNECASQSLQMALRQLVTALDNFFAKRAKYPNFKSKKNARQSYAIPQN--IKL  118
             Q+ Y YLNEC SQSLQMALRQLV+A DNFF+KRA+YP+FKSKKNA+QS+AIPQN  IK 
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  119  DNKKVYASKFTEGIKTKIHRKLDKDCIIKQAFISKIADEYYIAISYENNKSLPKPKVIEN  178
            + + +  +KF EGIK+K+HR L KD +IKQAFIS IAD+Y+ +ISYE + ++PKP +I +
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTIIKK  180

Query  179  AVGLDMGLENLIIRSDCVIYKNHKFLQDKENkliklqkqlskkqkGSNNYAKTKLKVAKA  238
            AVGLDMGL  LI+ SD + Y + +F Q  E+KL K Q++LSKK KGSNN  K   KVA+ 
Sbjct  181  AVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL  240

Query  239  HQKITRARDDYLHKISDEITNLYDFIAVENLNIKGLIKNKHLSKSIANASWGKFINLLTY  298
            H   + +RDDYLHKIS+EITN YD+I+VE LN+KGL++  H SKS+ANASWGKF+ +L Y
Sbjct  241  HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTMLKY  299

Query  299  KAENKGKTLMQIDKFFPSSQICSNCGSNTGKKPLHIRSFTCPNCNTKHHRDLNASINIRN  358
            KA+ K+KTL+ ID+FFPSSQ+CS CG NTGKK  +I  FTCP+CN  HHRD NAS+NIRN
Sbjct  300  KAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRN  359

Query  359  YALGIIDDRYKIKLDKSRVGITQS-Y---------ACKDSSSGV-SKYGYILD-TSYLSL  406
            YALG++DDR KIK+DKSRVGI ++ Y         AC  SS+GV SKYG ILD +SY ++
Sbjct  360  YALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASSNGVISKYGNILDLASYGAM  419

Query  407  KQE  409
            KQE
Sbjct  420  KQE  422

34) Tnap_1583 in NC_013642


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  236 bits (882),  Expect = 1e-63, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 248/382 (65%), Gaps = 17/382 (4%)

Query  1    MLRTYKFRIYPTREQEEKLAKHFGHTRFVYNFFLNYANIIYRVMERPTYYNEWASVLVKL  60
            ML + KFRIYP  +Q E ++KHFG +R VYN+FL+Y +  Y    + TY+     VL ++
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFT-MQKVLTQI  59

Query  61   KKTNKYSWLNEVNSQALQQSLKDLERAFKNFFKKQASYPKFKKKKFSRQTFRIPQHIQLY  120
            K  +KY  LNE NSQ+LQ +L++L  A+ NFF K+A YPKFK KK ++Q+F IPQ+I+  
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE--  117

Query  121  IKEDNPKYGCIFVPKFKEGIKVRLHRKLPKDGKIKQATFIKTPTNKYYAAIVFEVQDAEV  180
            IK +      I +PKFKEGIK +LHR LPKD+ IKQA FI   +++Y+ +I +E +++  
Sbjct  118  IKTETQT---IALPKFKEGIKAKLHRELPKDSVIKQA-FISCIADQYFCSISYETKEPIP  173

Query  181  QNTST-DILGIDLGIKDTITLSDGKKYKMPDLSKYERQIKRL---HRRLSRKQRGSKNWE  236
            + T     +G+D+G++  I  SD   Y  P++  Y++  K+L   +RRLS+K +GS+N+ 
Sbjct  174  KPTIIKKAVGLDMGLRTLIVTSDKIEY--PHIRFYQKLEKKLTKAQRRLSKKVKGSNNRK  231

Query  237  KARLRLAKLYEKIVNIKNDWLHKITHDLVSESQAGKIVVEDLNIKGMVQNHRLARHIHMQ  296
            K   ++A+L     N ++D LHKI++++ ++ +   I VE LN+KG+++  + ++ +   
Sbjct  232  KQAKKVARLHLACSNTRDDYLHKISNEITNQYDL--IGVETLNVKGLMRTYH-SKSLANA  288

Query  297  SWRRFLELLEYKAKRCGIEVIKANRYYPSSQMCSECGYINKEVKDLSVREWTCPVCGAHH  356
            SW +FL +L YKA+R +  ++  +R++PSSQ+CS CG+ N   K+ ++   TCP C   H
Sbjct  289  SWGKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITH  347

Query  357  DRDVNAAKNLVRYGLMLSIGRE  378
            +RD NA+ N+  Y+L +  +R+
Sbjct  348  HRDYNASVNIRNYALGMLDDRH  369

35) HBHAL_3450 in NC_017668


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  232 bits (866),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 152/357 (43%), Positives = 237/357 (67%), Gaps = 12/357 (3%)

Query  8    KFRIYPSKEQTTLIAKSIGCSRFVFNHFLSEWNNAYKRSGKGLSYAKCNKQLTQIKQD--  65
            KFRIYP+ +Q  LI+K +GCSR V+N FL  +++ Y ++ K   ++  +K LTQIK++  
Sbjct  6    KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTM-QKVLTQIKHQEK  64

Query  66   FQWLKEVDSTALQNSLRNLADSFDRFFKKLNNRPKFKSKKNRKQSYTAQYNKGNIRIVGN  125
            ++ L+E +S +LQ +LR+L  ++D FF K    PKFKSKKN KQS++   ++ +I+   +
Sbjct  65   YHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIP-QNIEIKTETQ  123

Query  126  KVKLPKVGWVLFAK-SREVE-GRILSATVRRNPSGKHFVSILVDTKVERLPKTN---SSV  180
             + LPK    + AK  RE+  + ++  +     +++ F SI  +TK E +PK      +V
Sbjct  124  TIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETK-EPIPKPTIIKKAV  182

Query  181  GIDLGLKDFAVLSNGTTYENPRYLRKTEKKLAKAQRIISRREKGSSNWHKQRIKVARLHE  240
            G+D+GL+ + V S+   Y + R+ +K EKKL+KAQR +S++ KGS+N+ KQ  KVARLH 
Sbjct  183  GLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARLHL  242

Query  241  KITNSRKDYLHKISTEIIKNHDVIGVENLQISNLLKNRKLSKSISDASWSMFTTMLEYKA  300
              +N+R DYLHKIS EI ++ D+IGVE L++  L++    SKS+++ASW+ F TML YKA
Sbjct  243  ACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTMLKYKA  301

Query  301  EWYGKQLIPVSKIFASSQLCSYCGYQNGEVKNLAVRTWDCPNCGSHHNRDLNASFNI  357
            ++ +K L+ + ++F+SSQLCSYCG++ G  K+  +    CP+C   H+RD NAS NI
Sbjct  302  QRKAKTLLGIDRFFPSSQLCSYCGFNTGK-KHENITKFTCPHCNITHHRDYNASVNI  357

36) TM1044 in NC_000853


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  231 bits (863),  Expect = 3e-62, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 17/382 (4%)

Query  4    MLRTYKFRIYPTREQEEKLAKHFGHTRFVYNFFLNYANIIYRVMERPTYYNEWASVLVKL  63
            ML + KFRIYP  +Q E ++KHFG +R VYN+FL+Y +  Y    + TY+     VL ++
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFT-MQKVLTQI  59

Query  64   KKTNKYSWLNEVNSQALQQSLKDLERAFKNFFKKQAGYPKFKKKKFSRQTFRIPQHIQLY  123
            K  +KY  LNE NSQ+LQ +L++L  A+ NFF K+A YPKFK KK ++Q+F IPQ+I+  
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE--  117

Query  124  IKEDNPKYGCIFVPKFKEGIKVRLHRKLPKDGKIKQATFIKTATNKYYAAIVFEVQDAEV  183
            IK +      I +PKFKEGIK +LHR LPKD+ IKQA FI   +++Y+ +I +E +++  
Sbjct  118  IKTETQT---IALPKFKEGIKAKLHRELPKDSVIKQA-FISCIADQYFCSISYETKEPIP  173

Query  184  QNTST-GILGIDLGIKDTITLSDGKKYKMPDLSKYERQIKRL---HRRLSRKQRGSKNWE  239
            + T     +G+D+G++  I  SD   Y  P++  Y++  K+L   +RRLS+K +GS+N+ 
Sbjct  174  KPTIIKKAVGLDMGLRTLIVTSDKIEY--PHIRFYQKLEKKLTKAQRRLSKKVKGSNNRK  231

Query  240  KARLCLAKLYEKIVNIKNDWLHKITHDLVSESQAGKIVVEDLNIKGMVQNHRLARHIHMQ  299
            K    +A+L     N ++D LHKI++++ ++ +   I VE LN+KG+++  + ++ +   
Sbjct  232  KQAKKVARLHLACSNTRDDYLHKISNEITNQYDL--IGVETLNVKGLMRTYH-SKSLANA  288

Query  300  SWRRFLELLEYKAKRCGIEVIKANRYYPSSQMCSECGYINKEVKDLSVREWTCPVCGAHH  359
            SW +FL +L YKA+R +  ++  +R++PSSQ+CS CG+ N   K+ ++   TCP C   H
Sbjct  289  SWGKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITH  347

Query  360  DRDVNAAKNLVRYGLMLSIGRE  381
            +RD NA+ N+  Y+L +  +R+
Sbjct  348  HRDYNASVNIRNYALGMLDDRH  369

37) HBHAL_2639 in NC_017668


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  231 bits (862),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 151/357 (43%), Positives = 236/357 (67%), Gaps = 12/357 (3%)

Query  8    KFRIYPSKEQTTLIAKSIGCSRFVFNHFLSEWNNAYKRSGKGLSYAKCNKQLTQIKQD--  65
            KFRIYP+ +Q  LI+K +GCSR V+N FL  +++ Y ++ K   ++  +K LTQIK++  
Sbjct  6    KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTM-QKVLTQIKHQEK  64

Query  66   FQWLKEVDSTALQNSLRNLADSFDRFFKKLNNRPKFKSKKNRKQSYTAQYNKGNIRIVGN  125
            ++ L+E +S +LQ +LR+L  ++D FF K    PKFKSKKN KQS++   ++ +I+   +
Sbjct  65   YHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIP-QNIEIKTETQ  123

Query  126  KVKLPKVGWVLFAK-SREVE-GRILSATVRRNPSGKHFVSILVDTKVERLPKTN---SSV  180
             + LPK    + AK  RE+  + ++  +     +++ F SI  +TK E +PK      +V
Sbjct  124  TIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETK-EPIPKPTIIKKAV  182

Query  181  GIDLGLKDFAVLSNGTTYENPRYLRKTEKKLAKAQRIISRREKGSSNWHKQRIKVARLHE  240
            G+D+GL+ + V S+   Y + R+ +K EKKL+KAQR +S++ KGS+N+ KQ  KVARLH 
Sbjct  183  GLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARLHL  242

Query  241  KITNSRKDYLHKISTEIIKNHDVIGVENLQISNMLKNRKLSKSISDASWSMFTTMLEYKA  300
              +N+R DYLHKIS EI ++ D+IGVE L++  +++    SKS+++ASW+ F TML YKA
Sbjct  243  ACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTMLKYKA  301

Query  301  EWYGKQLIPVSKIFASSQLCSYCGYQNGEVKNLAVRTWDCPKCGSHHNRDLNASFNI  357
            ++ +K L+ + ++F+SSQLCSYCG++ G  K+  +    CP C   H+RD NAS NI
Sbjct  302  QRKAKTLLGIDRFFPSSQLCSYCGFNTGK-KHENITKFTCPHCNITHHRDYNASVNI  357

38) Tmari_1048 in NC_021214


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  231 bits (863),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 17/382 (4%)

Query  1    MLRTYKFRIYPTREQEEKLAKHFGHTRFVYNFFLNYANIIYRVMERPTYYNEWASVLVKL  60
            ML + KFRIYP  +Q E ++KHFG +R VYN+FL+Y +  Y    + TY+     VL ++
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFT-MQKVLTQI  59

Query  61   KKTNKYSWLNEVNSQALQQSLKDLERAFKNFFKKQAGYPKFKKKKFSRQTFRIPQHIQLY  120
            K  +KY  LNE NSQ+LQ +L++L  A+ NFF K+A YPKFK KK ++Q+F IPQ+I+  
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE--  117

Query  121  IKEDNPKYGCIFVPKFKEGIKVRLHRKLPKDGKIKQATFIKTATNKYYAAIVFEVQDAEV  180
            IK +      I +PKFKEGIK +LHR LPKD+ IKQA FI   +++Y+ +I +E +++  
Sbjct  118  IKTETQT---IALPKFKEGIKAKLHRELPKDSVIKQA-FISCIADQYFCSISYETKEPIP  173

Query  181  QNTST-GILGIDLGIKDTITLSDGKKYKMPDLSKYERQIKRL---HRRLSRKQRGSKNWE  236
            + T     +G+D+G++  I  SD   Y  P++  Y++  K+L   +RRLS+K +GS+N+ 
Sbjct  174  KPTIIKKAVGLDMGLRTLIVTSDKIEY--PHIRFYQKLEKKLTKAQRRLSKKVKGSNNRK  231

Query  237  KARLCLAKLYEKIVNIKNDWLHKITHDLVSESQAGKIVVEDLNIKGMVQNHRLARHIHMQ  296
            K    +A+L     N ++D LHKI++++ ++ +   I VE LN+KG+++  + ++ +   
Sbjct  232  KQAKKVARLHLACSNTRDDYLHKISNEITNQYDL--IGVETLNVKGLMRTYH-SKSLANA  288

Query  297  SWRRFLELLEYKAKRCGIEVIKANRYYPSSQMCSECGYINKEVKDLSVREWTCPVCGAHH  356
            SW +FL +L YKA+R +  ++  +R++PSSQ+CS CG+ N   K+ ++   TCP C   H
Sbjct  289  SWGKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITH  347

Query  357  DRDVNAAKNLVRYGLMLSIGRE  378
            +RD NA+ N+  Y+L +  +R+
Sbjct  348  HRDYNASVNIRNYALGMLDDRH  369

39) Tpet_1563 in NC_009486


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  231 bits (862),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 17/382 (4%)

Query  1    MLRTYKFRIYPTREQEEKLAKHFGHTRFVYNFFLNYANIIYRVMERPTYYNEWASVLVKL  60
            ML + KFRIYP  +Q E ++KHFG +R VYN+FL+Y +  Y    + TY+     VL ++
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFT-MQKVLTQI  59

Query  61   KKTNKYSWLNEVNSQALQQSLKDLERAFKNFFKKQAGYPKFKKKKFSRQTFRIPQHIQLY  120
            K  +KY  LNE NSQ+LQ +L++L  A+ NFF K+A YPKFK KK ++Q+F IPQ+I+  
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE--  117

Query  121  IKEDNPKYGCIFVPKFKEGIKVRLHRKLPKDGKIKQATFIKTPTNKYYAAIVFEVQDAEV  180
            IK +      I +PKFKEGIK +LHR LPKD+ IKQA FI   +++Y+ +I +E +++  
Sbjct  118  IKTETQT---IALPKFKEGIKAKLHRELPKDSVIKQA-FISCIADQYFCSISYETKEPIP  173

Query  181  QNTST-DILGIDLGIKDTITLSDGKKYKMPDLSKYERQIKRL---HRRLSRKQRGSKNWE  236
            + T     +G+D+G++  I  SD   Y  P++  Y++  K+L   +RRLS+K +GS+N+ 
Sbjct  174  KPTIIKKAVGLDMGLRTLIVTSDKIEY--PHIRFYQKLEKKLTKAQRRLSKKVKGSNNRK  231

Query  237  KARLCLAKLYEKIVNIKNDWLHKITHDLVSESQAGKIVVEDLNIKGMVQNHRLARHIHMQ  296
            K    +A+L     N ++D LHKI++++ ++ +   I VE LN+KG+++  + ++ +   
Sbjct  232  KQAKKVARLHLACSNTRDDYLHKISNEITNQYDL--IGVETLNVKGLMRTYH-SKSLANA  288

Query  297  SWRRFLELLEYKAKRCGIEVIKANRYYPSSQMCSECGYINKEVKDLSVREWTCPVCGAHH  356
            SW +FL +L YKA+R +  ++  +R++PSSQ+CS CG+ N   K+ ++   TCP C   H
Sbjct  289  SWGKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITH  347

Query  357  DRDVNAAKNLVRYGLMLSIGRE  378
            +RD NA+ N+  Y+L +  +R+
Sbjct  348  HRDYNASVNIRNYALGMLDDRH  369

40) TRQ2_1629 in NC_010483


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  231 bits (862),  Expect = 4e-62, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 17/382 (4%)

Query  1    MLRTYKFRIYPTREQEEKLAKHFGHTRFVYNFFLNYANIIYRVMERPTYYNEWASVLVKL  60
            ML + KFRIYP  +Q E ++KHFG +R VYN+FL+Y +  Y    + TY+     VL ++
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFT-MQKVLTQI  59

Query  61   KKTNKYSWLNEVNSQALQQSLKDLERAFKNFFKKQAGYPKFKKKKFSRQTFRIPQHIQLY  120
            K  +KY  LNE NSQ+LQ +L++L  A+ NFF K+A YPKFK KK ++Q+F IPQ+I+  
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE--  117

Query  121  IKEDNPKYGCIFVPKFKEGIKVRLHRKLPKDGKIKQATFIKTPTNKYYAAIVFEVQDAEV  180
            IK +      I +PKFKEGIK +LHR LPKD+ IKQA FI   +++Y+ +I +E +++  
Sbjct  118  IKTETQT---IALPKFKEGIKAKLHRELPKDSVIKQA-FISCIADQYFCSISYETKEPIP  173

Query  181  QNTST-DILGIDLGIKDTITLSDGKKYKMPDLSKYERQIKRL---HRRLSRKQRGSKNWE  236
            + T     +G+D+G++  I  SD   Y  P++  Y++  K+L   +RRLS+K +GS+N+ 
Sbjct  174  KPTIIKKAVGLDMGLRTLIVTSDKIEY--PHIRFYQKLEKKLTKAQRRLSKKVKGSNNRK  231

Query  237  KARLCLAKLYEKIVNIKNDWLHKITHDLVSESQAGKIVVEDLNIKGMVQNHRLARHIHMQ  296
            K    +A+L     N ++D LHKI++++ ++ +   I VE LN+KG+++  + ++ +   
Sbjct  232  KQAKKVARLHLACSNTRDDYLHKISNEITNQYDL--IGVETLNVKGLMRTYH-SKSLANA  288

Query  297  SWRRFLELLEYKAKRCGIEVIKANRYYPSSQMCSECGYINKEVKDLSVREWTCPVCGAHH  356
            SW +FL +L YKA+R +  ++  +R++PSSQ+CS CG+ N   K+ ++   TCP C   H
Sbjct  289  SWGKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITH  347

Query  357  DRDVNAAKNLVRYGLMLSIGRE  378
            +RD NA+ N+  Y+L +  +R+
Sbjct  348  HRDYNASVNIRNYALGMLDDRH  369

41) TRQ2_1764 in NC_010483


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  231 bits (861),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 154/382 (41%), Positives = 247/382 (65%), Gaps = 17/382 (4%)

Query  1    MLRTYKFRIYPTREQEEKLAKHFGHTRFVYNFFLNYANIIYRVMERPTYYNEWASVLVKL  60
            ML + KFRIYP  +Q E ++KHFG +R VYN+FL+Y +  Y    + TY+     VL ++
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFT-MQKVLTQI  59

Query  61   KKTNKYSWLNEVNSQALQQSLKDLERAFKNFFKKQAGYPKFKKKKFSRQTFRIPQHIQLY  120
            K  +KY  LNE NSQ+LQ +L++L  A+ NFF K+A YPKFK KK ++Q+F IPQ+I+  
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE--  117

Query  121  IKEDNPKYGCIFVPKFKEGIKVRLHRKLPKDGKIKQATFIKTPTNKYYAAIVFEVQDAEV  180
            IK +      I +PKFKEGIK +LHR LPKD+ IKQA FI   +++Y+ +I +E +++  
Sbjct  118  IKTETQT---IALPKFKEGIKAKLHRELPKDSVIKQA-FISCIADQYFCSISYETKEPIP  173

Query  181  QNTST-DILGIDLGIKDTITLSDGKKYKMPDLSKYERQIKRL---HRRLSRKQRGSKNWE  236
            + T     +G+D+G++  I  SD   Y  P++  Y++  K+L   +RRLS+K +GS+N+ 
Sbjct  174  KPTIIKKAVGLDMGLRTLIVTSDKIEY--PHIRFYQKLEKKLTKAQRRLSKKVKGSNNRK  231

Query  237  KARLCLAKLYEKIVNIKNDWLHKITHDLVSESQAGKIVVEDLNIKGMVQNHRLARHIHMQ  296
            K    +A+L     N ++D LHKI++++ ++ +   I VE LN+KG+++  + ++ +   
Sbjct  232  KQAKKVARLHLACSNTRDDYLHKISNEITNQYDL--IGVETLNVKGLMRTYH-SKSLANA  288

Query  297  SWRRFLELLEYKAKRCGIEVIKANRYYPSSQMCSECGYINKEVKDLSVREWTCPVCGAHH  356
            SW +FL +L YKA+R +  ++  +R++PSSQ+CS CG+ N   K+ ++   TCP C   H
Sbjct  289  SWGKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITH  347

Query  357  DRDVNAAKNLVRYGLMLSIGRE  378
            +RD NA+ N+  Y+L +  +R+
Sbjct  348  HRDYNASVNIRNYALGMLDDRH  369

42) HBHAL_1899 in NC_017668


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  229 bits (854),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 149/357 (42%), Positives = 238/357 (67%), Gaps = 12/357 (3%)

Query  8    NFRIYPSKEQTTLIAKSIGCSRFVFNHFLSKWNNAYKLSGKGLSYAKCNKQLTQIKQD--  65
            +FRIYP+ +Q  LI+K +GCSR V+N FL  +++ Y  + K   ++  +K LTQIK++  
Sbjct  6    KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTM-QKVLTQIKHQEK  64

Query  66   FQWLKEVDSTALQNSLRDLADSFDRFFKKLNNRPKFKSKKNRKQSYTAQYNKDNIRIDGN  125
            ++ L+E +S +LQ +LR+L  ++D FF K    PKFKSKKN KQS++   ++ +I+ + +
Sbjct  65   YHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIP-QNIEIKTETQ  123

Query  126  KVKLPKVGWVLCAK-SREVE-GRILSATVRRNPSGKHFVSILVDTKVERLPKTN---SSV  180
             + LPK    + AK  RE+  + ++  +     +++ F SI  +TK E +PK      +V
Sbjct  124  TIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETK-EPIPKPTIIKKAV  182

Query  181  GIDLGLKDFAVLSNGTTYENPRYLRKTEKKLAKAQRILSRRVKGSSNWHKQRIKVARLHE  240
            G+D+GL+ + V S+   Y + R+ +K EKKL+KAQR LS++VKGS+N+ KQ  KVARLH 
Sbjct  183  GLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARLHL  242

Query  241  KIANSRKDHLHKISTEIIKNHDVVGVENLQISNMLKNRKLSKSISDASWSMFTSMLKYKA  300
              +N+R D LHKIS EI ++ D++GVE L++  +++    SKS+++ASW+ F +MLKYKA
Sbjct  243  ACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTMLKYKA  301

Query  301  KWYGKQLIPVSKIFASSQLCSYCGYQNDEVKNLAVRTWNCPNCGSHHDRDLNASFNI  357
            ++ +K L+ + ++F+SSQLCSYCG++ +  K+  +    CP+C   H+RD NAS NI
Sbjct  302  QRKAKTLLGIDRFFPSSQLCSYCGFNTGK-KHENITKFTCPHCNITHHRDYNASVNI  357

43) Pmob_0757 in NC_010003


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  219 bits (815),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 153/372 (42%), Positives = 252/372 (68%), Gaps = 11/372 (2%)

Query  1    MLKTYKFRIYPSNEQIEKLNQHFGHTRFVYNLFLEFSSNAYKNTKTSTNYYMWAKVLTVL  60
            ML++ KFRIYP+ +Q E +++HFG +R VYN FL++  + Y +    T Y+   KVLT +
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKET-YFTMQKVLTQI  59

Query  61   KKTEKYQWLNDVNSQSLQQSIKDLETGYKRffkkqak-hpkfkkkssrqsfrVPQHIQLY  119
            K  EKY+ LN+ NSQSLQ ++++L ++Y  FF K+A+      KK+++QSF +PQ+I++ 
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEI-  118

Query  120  ENEGNDKYGTLFVPKFKEGIKVRVHRKIDPNAKIKNCTFIKTTTGKYFVSITFEVEGSFP  179
              E +    T+ +PKFKEGIK ++HR +  ++ IK+ +FI   +++YF SI++E   ++P
Sbjct  119  KTETQ----TIALPKFKEGIKAKLHRELPKDSVIKQ-AFISCIADQYFCSISYETKEPIP  173

Query  180  DRDIDYENSIGMDMGLKDSVVLSDGTKYPAPKVLSKYERKLKHAYKKFSSKEQGSKNWDK  239
               I   +++G+DMGL+  +V SD   YP  +   K E+KL  A +++S K +GS+N+ K
Sbjct  174  KPTII-KKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKK  232

Query  240  AKLEVARIHEKIKNTREDFLHKLTKEISENQADVFVVETLNIRGMLKNHHLAKSISDSGW  299
                VAR+H    NTR+D+LHK+++EI+ NQ D++ VETLN++G+++  H +KS+++++W
Sbjct  233  QAKKVARLHLACSNTRDDYLHKISNEIT-NQYDLIGVETLNVKGLMRTYH-SKSLANASW  290

Query  300  YQFKTFLKYKAERLGKKVIEIGMFEPSSKVCSVCGYKNEGLKLSDREWVCPECGTKHDRD  359
             +F T LKYKA+R +K ++ I+ F PSS++CS CG++      +     CP+C   H+RD
Sbjct  291  GKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRD  350

Query  360  VNAAVNIRQFGL  371
             NA+VNIR+++L
Sbjct  351  YNASVNIRNYAL  362

44) BTG_31293 in NC_018486


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  213 bits (794),  Expect = 9e-57, Method: Compositional matrix adjust.
 Identities = 148/368 (41%), Positives = 235/368 (64%), Gaps = 12/368 (3%)

Query  8    KFRIYPNQAQAILINKTIGCSRFVFNHFLSLWDHAYKETGKGLTYGTCSAKLPAMKKE--  65
            KFRIYPN  Q  LI+K +GCSR V+N FL  ++  Y    K  TY T    L  +K +  
Sbjct  6    KFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKE-TYFTMQKVLTQIKHQEK  64

Query  66   LIWLKEVDSIAIQSSVRNLADAYTRFFKKQNSAPRFKSKKNNVQSYTTKQTNENIAVVGN  125
               L+E +S ++Q ++R+L  AY  FF K+   P+FKSKKN  QS++  Q  E I    +
Sbjct  65   YHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIE-IKTETQ  123

Query  126  RIKLPKL-GLIRFAKSREV-KGRILNATVRRNPSGRYFVSLLVETKVQELPKT---HSDI  180
             I LPK+   I+    RE+ K+ +++ +     +++YF S+  ETK + +PK       +
Sbjct  124  TIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETK-EPIPKPTIIKKAV  182

Query  181  GIDLGLKDFAILSDGTPYENPKFFRLLENKLAKAQRILSRRIKGSSRWNKQRVKVARIHE  240
            G+D+GL+ + + SD   Y + +F++ LE+KL+KAQR LS+++KGS+ ++KQ  KVAR+H 
Sbjct  183  GLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARLHL  242

Query  241  YISNARKDYLDKISTEIIKNHDVIGIEDLQVSNMLKNHKLAKAISEVSWSQFRTMLEYKA  300
              SN+R DYL+KIS EI ++ D+IG+E L+V  +++    +K++++ SW++F TML YKA
Sbjct  243  ACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTMLKYKA  301

Query  301  KWYGKQVIVVSKTFASSQLCSCCGYQNKDVKNLNLREWDCPSCHRHHDRDINASINIKNE  360
            ++ +K ++ + + F+SSQLCS CG+ N + K+ N+    CP C+  H+RD NAS+NI+N 
Sbjct  302  QRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITHHRDYNASVNIRNY  360

Query  361  AIRLLTAR  368
            A+ +L  R
Sbjct  361  ALGMLDDR  368

45) Cyast_0050 in NC_019778


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  212 bits (789),  Expect = 2e-56, Method: Compositional matrix adjust.
 Identities = 153/369 (42%), Positives = 232/369 (63%), Gaps = 11/369 (2%)

Query  1    MLKVVKARLYPTNPQKESLAKAFGSCRWVWNRFLALTNETYKQTGKGLSRYDLQKQLPSL  60
            ML+ +K R+YP   QKE ++K FG  R V N FL   +  Y +  K  + + +QK L  +
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKE-TYFTMQKVLTQI  59

Query  61   KKE--YEWLTETYSQCLQVVCLNLSRSFINFFEKRASFPRFKSK-HGKQSLSYPQNVKIK  117
            K +  Y+ L E  SQ LQ+   +L  ++ NFF KRA +P+FKSK ++KQS++ PQN+ IK
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIK  119

Query  118  GDM--IIFPKLGE-IYAKIHRSI--DGEIKTVTISKNKAEQYYASILFEDGKEQPLPNTE  172
             +   I +PK+ E I AK+HR +  D+ IK   IS   A+QY+ SI +E     P P   
Sbjct  120  TETQTIALPKFKEGIKAKLHRELPKDSVIKQAFIS-CIADQYFCSISYETKEPIPKPTII  178

Query  173  GKAIGLDMGIKDFCVASDGSKFDNPRWLEKHERNLKNKQQALSRKQKGSNNRNKARIKVA  232
             KA+GLDMG++ + V+SD   + + R  +K E++L + Q+ LS+K KGSNNR+K   KVA
Sbjct  179  KKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVA  238

Query  233  KVHNKISRTREDFHHKLSRRIVNENQVVICENLNIKGMVKNHCLAKSIQQVGWGQFQTML  292
            ++H   S TR+D+ HK+S  I N+ +++  E LN+KG+++    +KS+ + +WG+F TML
Sbjct  239  RLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRT-YHSKSLANASWGKFLTML  297

Query  293  KYKCEQEGKIYLEIDRFFPSSKTCNHCLNVVDSLLLDIRQWECPRCKTKHDRDINASCNI  352
            KYK ++ +K  L IDRFFPSS+ C+ C    +    +I +  CP+C+  H+RD NAS NI
Sbjct  298  KYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNI  357

Query  353  RDEGLRILS  361
            R+ +L +L 
Sbjct  358  RNYALGMLD  366

46) Hipma_0670 in NC_015318


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  212 bits (787),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 160/392 (41%), Positives = 253/392 (65%), Gaps = 34/392 (8%)

Query  5    ILRAYKYRIYPNKEQVKFLENHFGACRFVYNCFWGKYKDTKLPnkt-----llqkelkel  59
            +L A K+RIYPN +Q  ++ +HFG  R VYN F + Y++ + ++        +QK L ++
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLD-YRQKQYAKGIKETYFTMQKVLTQI  59

Query  60   kknenYSWLNQINSQSLQVSIHNLIKAYKRAFSKEVVKERKIALARANTPKQKAKALKLG  119
            K +E+Y  LN+ NSQSLQ+++++L+ AY   FSK   + R                    
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSK---RAR--------------------  96

Query  120  FPKFKSKKNNYQSFNIPQNVKIKEN--KVYIPKLKEGIKVKFHRPLSQNGKIKQATISRK  177
            +PKFKSKKN  QSF IPQN+ IK +   + +PK+KEGIK K+HR L++++ IKQA IS  
Sbjct  97   YPKFKSKKNAKQSFAIPQNIEIKTETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCI  156

Query  178  NGKYFISILIEEVIKIAKKPF--KAIGIDMGLEHFIILSNGEKISNPRWFRKTEQRLKIL  235
             ++YF SI  E    I+K  +  KA+G+DMGL  +I+ S+    ++ R ++K E++L   
Sbjct  157  ADQYFCSISYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKA  216

Query  236  QKRLSRKVLHSRNWYKLKAKISKFHEKILNQRNDFLHKVSIAIAKQYLLIAIENLSVKNM  295
            Q+RLS+KV  S N+ K   K++++H    N R+D+LHK+S  I++QY LI++E L+VK +
Sbjct  217  QRRLSKKVKGSNNRKKQAKKVARLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGL  276

Query  296  QKNHYLAKSISDVSWSKFVEFLKYKSEWYGAKLIQIDKFFPSSKTCNICGYKIDKLPLSK  355
             +  Y +KS+++ SW+KF+  LKYK+++ +  L+ ID+FFPSS+ C+ CG++ +K   + 
Sbjct  277  MRT-YHSKSLANASWGKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENI  335

Query  356  RKWTCPYCNTTHDRDINASINILKTALSGMEQ  387
             K TCP CN TH+RD NAS+NI + AL+ +++
Sbjct  336  TKFTCPHCNITHHRDYNASVNIRNYALGMLDD  367

47) Rumal_3660 in NC_014824


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  212 bits (788),  Expect = 3e-56, Method: Compositional matrix adjust.
 Identities = 146/363 (41%), Positives = 234/363 (65%), Gaps = 8/363 (2%)

Query  4    KAFKFRIYPNNEQKVLFAKTFGCVRLVYNYWLYKRIKQYKEYETTLSYNACAKEMAGLKK  63
            +A+KFRIYPN +QK L++K FGC R+VYNY L  R KQY       +Y +  K ++ +K 
Sbjct  3    NAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAK-GIKETYFTMQKVLTQIKH  61

Query  64   MEKYSFLREVDSVSLQQSLRHLDTAFQNFYKQPKTGFPRFKSKKCKKNSYSTVCINGNIS  123
             EKY +L E +S SLQ +LR+L +A++NF+ + ++ +P+FKSKK  K+S++ +  N +I 
Sbjct  62   QEKYHYLNECNSQSLQMALRQLVSAYDNFFSK-RARYPKFKSKKNAKQSFA-IPQNIEIK  119

Query  124  VSNGYLKLPKVGQ-VKLRQHRNIPDEYVLKSVTVSQTPSGKYYASILYEYENQVQEQEL-  181
                 + LPK  + +K + HR++P + V+K   +S   +++Y+ SI YE  + +    + 
Sbjct  120  TETQTIALPKFKEGIKAKLHRELPKDSVIKQAFIS-CIADQYFCSISYETKEPIPKPTII  178

Query  182  HDFLGLDFSMHELYKDSNGNEPAYPGYYRGAEKKLKREQRKLSLMQKGSKNRDKQRIKVA  241
               +GLD +++ L   S+  E +   +Y+  EKKL + QR+LS   KGS+NR KQ  KVA
Sbjct  179  KKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVA  238

Query  242  KMHEKVANQRKDFLHKQSRQIANAYDCVCIEDLNMQAMSQALKFGKSVSDNGWGMFVTFL  301
            ++H   +N R D+LHK S +I+N YD + +E LN++++ ++   +KS+++ +WG F+T L
Sbjct  239  RLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTML  297

Query  302  KYKLEEQGKRLVKIDKFFASSQTCSCCGYINKETKNLAIRAWDCPECGTHHDRDVNAAIN  361
            KYK + ++K L+ ID+FF+SSQ CS CG+ N   K+  I    CP+C   H+RD NA++N
Sbjct  298  KYKAQRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITHHRDYNASVN  356

Query  362  IRN  364
            IRN
Sbjct  357  IRN  359

48) Cyan10605_1871 in NC_019776


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  210 bits (783),  Expect = 6e-56, Method: Compositional matrix adjust.
 Identities = 151/369 (41%), Positives = 230/369 (63%), Gaps = 11/369 (2%)

Query  1    MLKVVKVRLYPTNPQKESLAKAFGSCRWLWNHFHALTNETYKQTGKGLSRYDLQKQLPSL  60
            ML+ +K R+YP   QKE ++K FG  R + N F    +  Y +  K  + + +QK L  +
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKE-TYFTMQKVLTQI  59

Query  61   KKE--YEWLTETYSQCLQVVCLNLSRSFINFFEKRASFPRFKSK-HGKQSLSYPQNVKIK  117
            K +  Y+ L E  SQ LQ+   +L  ++ NFF KRA +P+FKSK ++KQS++ PQN+ IK
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIK  119

Query  118  GDI--IIFPKLGE-IYAKIHRSI--DGEIKTVTISKNKAEQYYASILFEDGKEQPLPNTE  172
             +   I +PK+ E I AK+HR +  D+ IK   IS   A+QY+ SI +E     P P   
Sbjct  120  TETQTIALPKFKEGIKAKLHRELPKDSVIKQAFIS-CIADQYFCSISYETKEPIPKPTII  178

Query  173  GKAIGLDMGIKDFCVTSDGSKFDNPRWLARHERNLKNKQKDLSRKQKGSNNRNKARIKVA  232
             KA+GLDMG++ + VTSD   + + R   + E++L + Q+ LS+K KGSNNR+K   KVA
Sbjct  179  KKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVA  238

Query  233  KVHNKISRTREDFHHKLSRRIVNENQVVICENLNIKGMVKNHCLAKSIQQVGWGQFQTML  292
            ++H   S TR+D+ HK+S  I N+ +++  E LN+KG+++    +KS+ + +WG+F TML
Sbjct  239  RLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRT-YHSKSLANASWGKFLTML  297

Query  293  KYKCEQEGKIYLEIDRFFPSSKTCNHCLNIVDSLPLDIRQWECPRCKTKHDRDMNASCNI  352
            KYK ++ +K  L IDRFFPSS+ C+ C    +    +I +  CP+C+  H+RD NAS NI
Sbjct  298  KYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNI  357

Query  353  RDEGLRILS  361
            R+ +L +L 
Sbjct  358  RNYALGMLD  366

49) Pmob_1254 in NC_010003


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  207 bits (769),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 151/376 (41%), Positives = 250/376 (67%), Gaps = 12/376 (3%)

Query  1    MLKTYKFRLYLTNEQVEKFSQHFGHTRFIYNLFLEFSSNAYKNTKTSMVNYNTWCKILTV  60
            ML++ KFR+Y   +Q E +S+HFG +R +YN FL++  + Y  +K     Y T  K+LT 
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQY--AKGIKETYFTMQKVLTQ  58

Query  61   LKRSEKYHWLNDANSQSLQQSIKDLETSYKRffkkqak-hpkfkkkssrqsfrVPQHIQL  119
            +K+ EKYH LN+ NSQSLQ ++++L ++Y  FF K+A+      KK+++QSF +PQ+I++
Sbjct  59   IKHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEI  118

Query  120  YENEGNDKYGILFVPKFKEGIKVRVHRKIDPNAKIKNCTFVKTPTDKYFVSITFEVEGSY  179
               E +     + +PKFKEGIK ++HR +  ++ IK+ +F+   +D+YF SI++E   + 
Sbjct  119  -KTETQ----TIALPKFKEGIKAKLHRELPKDSVIKQ-AFISCIADQYFCSISYETKEPI  172

Query  180  PERDIDYENSIGMDMGLKDFVVLSDGTKYPALKVLSKYERRLKHAYKIFSSKEQGSKNWD  239
            P   I   +++G+DMGL+ ++V SD   YP ++   K E++L  A + +S K +GS+N+ 
Sbjct  173  PKPTI-IKKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRK  231

Query  240  KAKLEVARIHEKIKNTREDFLHKLTKEISENQADLFVVETLNIRGMLKNHHLAKSISDSG  299
            K    VAR+H    NTR+D+LHK+++EI+ NQ DL+ VETLN++G+++  H +KS+++++
Sbjct  232  KQAKKVARLHLACSNTRDDYLHKISNEIT-NQYDLIGVETLNVKGLMRTYH-SKSLANAS  289

Query  300  WYQFKTFLKYKAERLGKKVIEIGMFEPSSKVCSVCGYKNEGLKLSDREWVCPECGTKHDR  359
            W +F T LKYKA+R +K ++ I+ F PSS++CS CG++      +     CP+C   H+R
Sbjct  290  WGKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHR  349

Query  360  DVNAAVNIRQCGIKQL  375
            D NA+VNIR+ ++  L
Sbjct  350  DYNASVNIRNYALGML  365

50) Rumal_3507 in NC_014824


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  205 bits (764),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 148/363 (41%), Positives = 236/363 (66%), Gaps = 8/363 (2%)

Query  4    KAFKFRIHPNNEQKILFAKTFGCVRLVYNYWLYKRIKQYKEYETTLSYNASakemaelkk  63
            +A+KFRI PN +QK L++K FGC R+VYNY L  R KQY       +Y +  K ++++K 
Sbjct  3    NAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAK-GIKETYFTMQKVLTQIKH  61

Query  64   mekYSFLREVDSVSLQQSLRHLDTAFQNFFKQPKTGFPRFKSKKCKKNSYSTVCINGNIA  123
             EKY +L E +S SLQ +LR+L +A++NFF + ++ +P+FKSKK  K+S++ +  N +I 
Sbjct  62   QEKYHYLNECNSQSLQMALRQLVSAYDNFFSK-RARYPKFKSKKNAKQSFA-IPQNIEIK  119

Query  124  ISNGYLKLPKVGQ-VKVKQHRNIPDEYVLKSVTVSQTPSGKYYASILYEYENQVQEQEL-  181
                 + LPK  + +K K HR++P + V+K   +S   +++Y+ SI YE  + +    + 
Sbjct  120  TETQTIALPKFKEGIKAKLHRELPKDSVIKQAFIS-CIADQYFCSISYETKEPIPKPTII  178

Query  182  HDFLGLDFSMHELYKDSNGNEPAYPRYYRRAEKKLKREQRKLSLMQKGSKNRDKQRIKVA  241
               +GLD +++ L   S+  E +  R+Y++ EKKL + QR+LS   KGS+NR KQ  KVA
Sbjct  179  KKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVA  238

Query  242  KMHEKVANQRKDFLHKQSRQIANAYDCVCIEDLNMQAMSQALKFGKSVSDNGWGMFVTFL  301
            ++H   +N R D+LHK S +I+N YD + +E LN++++ ++   +KS+++ +WG F+T L
Sbjct  239  RLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTML  297

Query  302  KYKLEEQGKRLVKIDKFFASSQTCSCCGYINKETKNLAIRAWDCPECGTHHDRDVNAAIN  361
            KYK + ++K L+ ID+FF+SSQ CS CG+ N   K+  I    CP+C   H+RD NA++N
Sbjct  298  KYKAQRKAKTLLGIDRFFPSSQLCSYCGF-NTGKKHENITKFTCPHCNITHHRDYNASVN  356

Query  362  IRN  364
            IRN
Sbjct  357  IRN  359

51) Calkr_2266 in NC_014721


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  196 bits (728),  Expect = 1e-51, Method: Compositional matrix adjust.
 Identities = 145/361 (41%), Positives = 230/361 (64%), Gaps = 9/361 (2%)

Query  1    MQKAFKFRIYPNKKQIELIKNTFGCVRFVYNYYLAKREEEYKTNGVTFNYNKCSADLTKQ  60
            M +A+KFRIYPN +Q ELI + FGC R VYNY+L  R+ +Y ++G+   Y      LT+ 
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQY-AKGIKETYFTMQKVLTQI  59

Query  61   KQVNTW--LKEVDKFALQNALKDLDKAFKNFFEGRANYPKFKSKKNKHQSFRTNFSnnni  118
            K+ +    L+E +  +LQ AL++L  A+ NFF  RA YPKFKSKKN  QSF     N +I
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIP-QNIEI  118

Query  119  kiegnkikLPKL-GWVKFAKSREIE-GKILNVTVSRTPTGKYFISICCSVDKIEEKPKT-  175
            K E + I LPK+   +K    RE+  + +++ +     +++YF SI         KP   
Sbjct  119  KTETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQYFCSISYETKEPIPKPTII  178

Query  176  DRVIGIDLGINHFLIDSDGNKISNPKYLIKLEKRLIREQRKLSRKQIGSNNYKKQALKVA  235
             + +G+D+G+  +++ SD    ++ ++  KLEK+L + QR+LS+K  GSNN KKQA KVA
Sbjct  179  KKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVA  238

Query  236  KIYEKIRNQREDFLHKLSSKIINENQVIILEDLKVKNMLKNDRLSKFISDSAWAKFVKML  295
            ++     N R+D+LHK+S+ I N+ ++I +E L+VK +++  + SK +++++W+KF+ ML
Sbjct  239  RLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFLTML  297

Query  296  EYKAFWYGRAIVKVDTFYPSSQICSVCGYRNEEVKDLKIREWRCPECGIVHDRDINASIN  355
             YKA + +++++ +D F+PSSQ+CS CG+     K+ +I    CP+C I H+RD NAS+N
Sbjct  298  KYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGK-KHENITKFTCPHCNITHHRDYNASVN  356

Query  356  I  356
            I
Sbjct  357  I  357

52) Pmob_0263 in NC_010003


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  194 bits (719),  Expect = 7e-51, Method: Compositional matrix adjust.
 Identities = 150/372 (41%), Positives = 247/372 (67%), Gaps = 11/372 (2%)

Query  1    MLKTYKFRIYPTNEQIEKFSQHFGHTRFVYNLFLEFankaykntktytnyyMWAKVLTVL  60
            ML++ KFRIYP  +Q E +S+HFG +R VYN FL++ +K Y +    T + M  KVLT +
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTM-QKVLTQI  59

Query  61   KKTEKYRWLNDVNSQSLQQSIKNLETGFKRffkkqskypkfkkkssrqsf-rVPQHIQLY  119
            K  EKY+ LN+ NSQSLQ ++++L +++  FF K+++YPKFK K + +    +PQ+I++ 
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIK  119

Query  120  ENENNDKYGILFVPKFKEGIKVRVHRKIDPNAKIKNCTFIKTPTGKYFVSITFQVEGSYP  179
             + +      + +PKFKEGIK ++HR +  ++ IK+ +FI   +++YF SI+++   + P
Sbjct  120  TETQT-----IALPKFKEGIKAKLHRELPKDSVIKQ-AFISCIADQYFCSISYETKEPIP  173

Query  180  ERDIDYENSIGMDMGLKDCVVLSDGTKYQAPKVLSKYERKLKHAYKKFSSKEQRSKNWDK  239
               I   +++G+DMGL+  +V SD   Y   +   K E+KL  A +++S K + S+N+ K
Sbjct  174  KPTI-IKKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKK  232

Query  240  AKLEVARIHEKIKNTREDFLHKLTKEISENQADVFVVETLNIRGMLKNHHLAKSISDLGW  299
                VAR+H    NTR+D+LHK+++EI+ NQ D++ VETLN++G+++  H +KS+++ +W
Sbjct  233  QAKKVARLHLACSNTRDDYLHKISNEIT-NQYDLIGVETLNVKGLMRTYH-SKSLANASW  290

Query  300  YKFKTFLKYKAERLGKKVIEIGTFEPSSKTCSVCGYKNAGLKLSDREWVCPECGTKHDRD  359
             KF T LKYKA+R +K ++ I+ F PSS+ CS CG++ +    +     CP+C   H+RD
Sbjct  291  GKFLTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRD  350

Query  360  INAAVNIRQFGL  371
             NA+VNIR+++L
Sbjct  351  YNASVNIRNYAL  362

53) BT9727_3437 in NC_005957


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  186 bits (690),  Expect = 1e-48, Method: Compositional matrix adjust.
 Identities = 150/374 (41%), Positives = 237/374 (64%), Gaps = 21/374 (5%)

Query  6    KAYKFRLYPTEEQAHLIRKTFGCVRFVYNKMLAERKEVYEKHKANKEE-LKEQKFSTPAK  64
            +A KFR+YP  +Q +LI K FGC R VYN  L  R+  Y K  + KE  +  QK  T  K
Sbjct  3    NAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAK--GIKETYFTMQKVLTQIK  60

Query  65   YKVEYEWLKEVDSlalanaqlnlqtaYKNFFSGQSDFPTFKSKKSRKSYTTNRVNGNIML  124
             +  Y+ L+E +S +L  A  +L +AY NFFS ++ +P FKSKK+ K   +   N +I  
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKT  120

Query  125  FHGYIKLPKLKM-VKLKQHREIPPKHIIKSCTISMTPTGKYYVSILTEYE-KEITPKE--  180
                I LPK+K  +K K HRE+P   +IK   IS   +++Y+ SI   YE KE  PK   
Sbjct  121  ETQTIALPKFKEGIKAKLHRELPKDSVIKQAFIS-CIADQYFCSI--SYETKEPIPKPTI  177

Query  181  VERVVGLDFAMVELYVSSEDEKANYP--RFYRQMLEKLAKAQRVLARRVKGSERWNKQRI  238
            + + VGLD ++  L V+S+  K +YP  RFY+++  KL+KAQR L+++VKGS+ ++KQ  
Sbjct  178  IKKAVGLDMGLRTLIVTSD--KIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAK  235

Query  239  RVAKLHEKVANQRKNFLHHKSKELATSFDVVAIEDLHMKGMSRALRFGKSVADNGWRMFT  298
            +VA+LH   +N R ++LH  S+E++  +D++++E L++KG+ R+ + +KS+A+ +W  F 
Sbjct  236  KVARLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFL  294

Query  299  AFLAYKLQEQGKQLVKIDKWFPSTKMCSRCG---NKKEMPLCKRTYACS-CGLTIGRDYN  354
            + L YK Q ++K L+ ID+ FPS+++CS CG    KK+  + K  ++C+ C +T  RDYN
Sbjct  295  TMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITK--FTCPHCNITHHRDYN  352

Query  355  AAINIKKEAIRLLA  368
            A++NI++ A+ +L 
Sbjct  353  ASVNIRNYALGMLD  366

54) ABC2013 in NC_006582


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  170 bits (629),  Expect = 9e-44, Method: Compositional matrix adjust.
 Identities = 150/369 (41%), Positives = 225/369 (61%), Gaps = 17/369 (4%)

Query  4    KAYKFRLYPTREQEQLLVKTFGCVRFVYNKMLAERKETYEKFKDDKEA-LKKQKFSTPAK  62
            +A KFR+YP  +Q +L+ K FGC R VYN  L  R+  Y K  + KE+ +  QK  T  K
Sbjct  3    NAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAK--GIKETYFTMQKVLTQIK  60

Query  63   YKKEFVWLKEVDSlalanaqlnlqkaYKNFFSGRGEFPKFKSRK-ARQSYTTNVVNGNIM  121
             +  +  L+E +S +L  A  +L  AY NFFS R+ +PKFKS+K A+QS++    N +I 
Sbjct  61   HQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQ-NIEIK  119

Query  122  LLDGYIKLPKLKL-VKMKQHREIPSHHVLKSCTVSRTKTGKYNVSILTEY-EHQPTQKDI  179
                 I LPK+K  +K K HRE+P + V+K   +S   +++Y  SI  E  E  P    I
Sbjct  120  TETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCI-ADQYFCSISYETKEPIPKPTII  178

Query  180  QAVVGLDFSMNGLFVDSEEGKTANYP--RFYCQALEK-LAKEQRILSRRKKGSHRWHKQR  236
            +  VGLD ++  L+V S+     +YP  RFY Q LEK L+K QR LS++ KGS+ + KQ 
Sbjct  179  KKAVGLDMGLRTLIVTSD---KIEYPHIRFY-QKLEKKLTKAQRRLSKKVKGSNNRKKQA  234

Query  237  LKVAKLHEKMANQRKDFLHKASHKLAKRYDCVVIEDLNMKGMAQALHFGKSVADHAWGMF  296
             KVA+LH   +N R D+LHK S+ ++++YD + +E LN+KG+ ++ H +KS+A+ +WG F
Sbjct  235  KKVARLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKF  293

Query  297  TTFLQYKLEDQGKQLIKIDKWFPSSKTCSCCGQVRESLALSERIFHC-DCGFVADRDWNA  355
             T L+YK + ++K L+ ID+ FPSS+ CS CG        +   F C +C +  +RD NA
Sbjct  294  LTMLKYKAQRKAKTLLGIDRFFPSSQLCSYCGFNTGKKHENITKFTCPHCNITHHRDYNA  353

Query  356  AINIKREGL  364
            ++NI+  +L
Sbjct  354  SVNIRNYAL  362

55) BBR47_09880 in NC_012491


> U60177|3|G2|63350380|AAC44710.2|Helicobacter_pylori_CCUG_17874=NCTC_11638|+|581..1864|tnpB|-|TnpB
Length=427

 Score =  169 bits (626),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 152/375 (41%), Positives = 244/375 (66%), Gaps = 21/375 (5%)

Query  1    MHRAYKFRLYPNKEQATLINKTIGCTRFVFNYFLAKRKDAYEQENKTLNYNDCSALLTQL  60
            M  A KFR+YPN +Q  LI+K +GC+R V+NYFL  R+  Y +  K   Y     +LTQ+
Sbjct  1    MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKE-TYFTMQKVLTQI  59

Query  61   KKE--IEWLKEVDSTALQSTLKDLDssykkffkekkgypkfkskkNQKQSYTC--KMNIK  116
            K +   + L+E +S +LQ +L++L S+Y +FF  +  YPKFKSKKN KQS++   +++IK
Sbjct  60   KHQEKYHYLNECNSQSLQMALRQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIK  119

Query  117  IEGNRIKLPKLGWVSYAK-SREV--EGRILSATIRCNPSGKYFVSVLCETECKLLPQ---  170
             E + I LPK+     AK  RE+  ++ I  A I C + ++YF S+  ET    +P+   
Sbjct  120  TETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIA-DQYFCSISYETK-EPIPKPTI  177

Query  171  VERTVGVDLGIKDFAILSTGEKVANP--KYYRKYEKQLAKWQRIQSRRKKGSNNRNKART  228
            + ++VG+D+G++  +++ T++K+  P  ++Y+K EK+L+K QR  S++ KGSNNR+K   
Sbjct  178  IKKAVGLDMGLR--TLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAK  235

Query  229  KVAILHEKIANTRNDFLHKLSTKLINESQVICLEDLQVENMVKNHKLAKSIADASWSMFR  288
            KVA LH   +NTR+D+LHK+S  + N+ ++I +E L+V  +++    +KS+A+ASW+ F 
Sbjct  236  KVARLHLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYH-SKSLANASWGKFL  294

Query  289  TMLEYKAEWYGRKVSIVGKQFPSSQLCSTPNCGYRNKEVKSLNLRSWICPHCGVQHDRDQ  348
            TML YKA++ ++ +  +++ FPSSQLCS   CG+ N   K  N+    CPHC + H+RD 
Sbjct  295  TMLKYKAQRKAKTLLGIDRFFPSSQLCS--YCGF-NTGKKHENITKFTCPHCNITHHRDY  351

Query  349  NAAINIEQEGLRLLA  363
            NA++NI + +L +L 
Sbjct  352  NASVNIRNYALGMLD  366