Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
HrcJ protein |
NC_010688 (Xanthomonas campestris B100) |
2e-87 |
83 |
|
HrcJ protein |
NC_007508 (Xanthomonas campestris 85-10) |
4e-87 |
100 |
|
HrcJ protein |
NC_016010 (Xanthomonas axonopodis F1) |
1e-86 |
99 |
|
HrcJ protein |
NC_020815 (Xanthomonas citri Aw12879) |
4e-86 |
99 |
|
HrcJ protein |
NC_020800 (Xanthomonas axonopodis Xac29-1) |
5e-85 |
99 |
|
HrcJ protein |
NC_003919 (Xanthomonas axonopodis 306) |
1e-84 |
99 |
|
type III secretion apparatus lipoprotein, YscJ/HrcJ family |
NC_010717 (Xanthomonas oryzae PXO99A) |
3e-83 |
95 |
|
protein HrpB3 |
NC_006834 (Xanthomonas oryzae KACC10331) |
5e-82 |
95 |
|
HrcJ protein |
NC_007705 (Xanthomonas oryzae MAFF 311018) |
5e-82 |
95 |
|
HrcJ protein |
NC_007086 (Xanthomonas campestris 8004) |
9e-82 |
80 |
|
HrcJ protein |
NC_003902 (Xanthomonas campestris ATCC 33913) |
9e-82 |
80 |
|
type III secretion protein HrcJ |
NC_017267 (Xanthomonas oryzae BLS256) |
1e-80 |
94 |
|
type III secretion protein HrcJ |
NC_017271 (Xanthomonas campestris 756C) |
5e-80 |
79 |
|
hypothetical protein |
NC_003296 (Ralstonia solanacearum GMI1000) |
9e-61 |
68 |
|
Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) |
NC_021745 (Ralstonia solanacearum FQY_4) |
1e-60 |
67 |
|
nodulation protein NolT |
NC_002678 (Mesorhizobium loti MAFF303099) |
5e-40 |
43 |
|
type III secretion apparatus lipoprotein, YscJ/HrcJ family |
NC_019848 (Sinorhizobium meliloti GR4) |
4e-37 |
44 |
|
type III secretion component |
NC_005773 (Pseudomonas syringae 1448A) |
7e-34 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='U33548' AND ph.id_pai_orf='3' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc