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PAthogenisity Island DataBase (PAI DB)

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Homologs of HMPREF0351_12127 gene of NC_017960_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) EFAU004_02131
( YP_005355333.1 )

phage major capsid protein, HK97 family

NC_017022
(Enterococcus faecium Aus0004)

0.0

100

2) HMPREF0351_12127
( YP_006376733.1 )

bifunctional family U35 bacteriophage prohead peptidase/major capsid protein

NC_017960
(Enterococcus faecium DO)

0.0

100

3) Lp16_1953
( YP_008121769.1 )

prophage P2b protein 18, major capsid protein

NC_021514
(Lactobacillus plantarum 16)

1e-132

4) LBP_cg1995
( YP_007987672.1 )

Prophage Lp3 protein 18

NC_021224
(Lactobacillus plantarum P-8)

4e-132

5) LCAZH_1012
( YP_003788105.1 )

prophage Lp3 protein 18-like protein

NC_014334
(Lactobacillus casei Zhang)

4e-126

6) LGG_02901
( YP_003172647.1 )

phage-related prohead protease

NC_013198
(Lactobacillus rhamnosus GG)

4e-125

7) LRHM_2792
( YP_005867284.1 )

phage major capsid protein

NC_017482
(Lactobacillus rhamnosus GG)

4e-125

8) LC705_00696
( YP_003173386.1 )

phage-related prohead protease

NC_013199
(Lactobacillus rhamnosus Lc 705)

4e-125

9) LBPG_01500
( YP_008448020.1 )

prophage Lp3 protein 18

NC_022112
(Lactobacillus paracasei 8700:2)

5e-125

10) JDM1_0046
( YP_003061632.1 )

prophage Lp3 protein 18

NC_012984
(Lactobacillus plantarum JDM1)

8e-124

11) LOCK908_1092
( YP_008205591.1 )

Prophage Lp3 protein 18

NC_021725
(Lactobacillus rhamnosus LOCK908)

9e-124

12) lp_2463
( YP_004890152.1 )

prophage P2b protein 18, major capsid protein

NC_004567
(Lactobacillus plantarum WCFS1)

3e-123

13) LC705_01075
( YP_003173765.1 )

phage-related prohead protease

NC_013199
(Lactobacillus rhamnosus Lc 705)

5e-123

14) LCBD_3114
( YP_005861144.1 )

Phage capsid protein

NC_017474
(Lactobacillus casei BD-II)

8e-122

15) orf44
( YP_001989003.1 )

Capsid protein

NC_010999
(Lactobacillus casei BL23)

8e-122

16) LC2W_3097
( YP_005858006.1 )

Phage capsid protein

NC_017473
(Lactobacillus casei LC2W)

8e-122

17) BN194_30330
( YP_006753099.1 )

phage capsid protein

NC_018641
(Lactobacillus casei W56)

8e-122

18) LRI_1512
( YP_008099866.1 )

prophage Lp3 protein 18

NC_021494
(Lactobacillus reuteri I5007)

5e-120

19) Lreu_0672
( YP_001271274.1 )

HK97 family phage major capsid protein

NC_009513
(Lactobacillus reuteri DSM 20016)

2e-115

20) LAR_0646
( YP_001841642.1 )

phage capsid protein

NC_010609
(Lactobacillus reuteri JCM 1112)

2e-115

21) PECL_601
( YP_005004574.1 )

phage prohead protease, HK97 family

NC_016605
(Pediococcus claussenii ATCC BAA-344)

2e-112

• Sequence Alignments

1) EFAU004_02131 in NC_017022


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  745 bits (2818),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/488 (100%), Positives = 488/488 (100%), Gaps = 0/488 (0%)

Query  20   DSPKVEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHD  79
            DSPKVEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHD
Sbjct  20   DSPKVEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHD  79

Query  80   YSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLDSF  139
            YSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLDSF
Sbjct  80   YSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLDSF  139

Query  140  DKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLEST  199
            DKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLEST
Sbjct  140  DKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLEST  199

Query  200  SKAQKESNNMEKTLIDNEKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLK  259
            SKAQKESNNMEKTLIDNEKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLK
Sbjct  200  SKAQKESNNMEKTLIDNEKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLK  259

Query  260  RSNYNLAQYATVKTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRA  319
            RSNYNLAQYATVKTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRA
Sbjct  260  RSNYNLAQYATVKTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRA  319

Query  320  GKIALSNEVVEDSAVNIVQEVKDQLAKLVENTDNKHIMdllktftkktaatlddLKQLYN  379
            GKIALSNEVVEDSAVNIVQEVKDQLAKLVENTDNKHIMDLLKTFTKKTAATLDDLKQLYN
Sbjct  320  GKIALSNEVVEDSAVNIVQEVKDQLAKLVENTDNKHIMDLLKTFTKKTAATLDDLKQLYN  379

Query  380  VALDPALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFAN  439
            VALDPALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFAN
Sbjct  380  VALDPALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFAN  439

Query  440  PKAGTFPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEF  499
            PKAGTFPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEF
Sbjct  440  PKAGTFPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEF  499

Query  500  TPVVTPKV  507
            TPVVTPKV
Sbjct  500  TPVVTPKV  507

2) HMPREF0351_12127 in NC_017960


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  745 bits (2818),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 488/488 (100%), Positives = 488/488 (100%), Gaps = 0/488 (0%)

Query  20   DSPKVEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHD  79
            DSPKVEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHD
Sbjct  20   DSPKVEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHD  79

Query  80   YSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLDSF  139
            YSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLDSF
Sbjct  80   YSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLDSF  139

Query  140  DKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLEST  199
            DKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLEST
Sbjct  140  DKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLEST  199

Query  200  SKAQKESNNMEKTLIDNEKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLK  259
            SKAQKESNNMEKTLIDNEKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLK
Sbjct  200  SKAQKESNNMEKTLIDNEKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLK  259

Query  260  RSNYNLAQYATVKTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRA  319
            RSNYNLAQYATVKTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRA
Sbjct  260  RSNYNLAQYATVKTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRA  319

Query  320  GKIALSNEVVEDSAVNIVQEVKDQLAKLVENTDNKHIMdllktftkktaatlddLKQLYN  379
            GKIALSNEVVEDSAVNIVQEVKDQLAKLVENTDNKHIMDLLKTFTKKTAATLDDLKQLYN
Sbjct  320  GKIALSNEVVEDSAVNIVQEVKDQLAKLVENTDNKHIMDLLKTFTKKTAATLDDLKQLYN  379

Query  380  VALDPALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFAN  439
            VALDPALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFAN
Sbjct  380  VALDPALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFAN  439

Query  440  PKAGTFPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEF  499
            PKAGTFPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEF
Sbjct  440  PKAGTFPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEF  499

Query  500  TPVVTPKV  507
            TPVVTPKV
Sbjct  500  TPVVTPKV  507

3) Lp16_1953 in NC_021514


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  467 bits (1759),  Expect = 1e-132, Method: Compositional matrix adjust.
 Identities = 284/516 (56%), Positives = 389/516 (76%), Gaps = 39/516 (7%)

Query  3    QDRRLTIDAELRAQTPQSETPEDGPAENSADPQPKDSQTSKGKTISGYAIVWNSPSKDLG  62
            +++RLT +AEL A++P+ E             + ++ Q + GKTISGYA+    PSKDLG
Sbjct  7    KEKRLTEEAELTADSPKVE-------------KENEKQPTDGKTISGYALKFGQPSKDLG  53

Query  63   GFTEVVTPKALDGVDLSNVLMLNNHDYTQVLASAKAGTLTLETDDKGLHFTAQLPNTSFA  122
            GF EV+TP AL  VDLSNV++L  HDY++ LAS KAGTL L+ DD GLHF A+L +T+++
Sbjct  54   GFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYS  113

Query  123  NDVYEEVQSGNVDSCSFGFDSDDNTDEWAKDDDGNITRTIKQVKSLFDVSVVAVPAYDDT  182
            NDVYE++  G VDS SFGF      D   K +DG I R+I ++K+L ++SVV+VPAYD +
Sbjct  114  NDVYENISKGVVDSMSFGFVL--GLDSFDKKEDGTIERSIDKIKALNEISVVTVPAYDSS  171

Query  183  NVQVDTRSYEKFINQ----------------EKEPDNMAKQTIIDPNGNENKTGIPAFEQ  226
            NVQV+ RSYE F+++                +KE++NM K T+ID    ++KT + ++E+
Sbjct  172  NVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNMEK-TLID----NEKTELRGYEE  226

Query  227  YVRTHGETRDGLKTDGVSAVIPKELITPVFQLKQSNYNLAQYATVKQVSSGSGTYPIATS  286
            Y+R++GE RDG+ T   +AV+P E+I  VF+LK+SNYNLAQYATVK VS+G G YP+AT+
Sbjct  227  YIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATN  286

Query  287  RQSAVLATKEELADIADVNANMFTEVPFDVKTRAGKIALSNEVVEDAEVDIVSEVKNQLQ  346
            +Q AVLATK ELA+I+D++A+MFT V + V TRAGKIALSNEVVED+ V+IV EVK+QL 
Sbjct  287  QQ-AVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLA  345

Query  347  QLVDNTDNTQIMSLLTGTSFTKATAANIDDLKKIFNVTLDPALSKMWLVNQSGFNYLDTL  406
            +LV+NTDN +IM LL   +FTK TAA +DDLK+++NV+LDPAL+KM ++NQSG+  LDTL
Sbjct  346  KLVENTDNKHIMDLLK--TFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTL  403

Query  407  KDSEGRYLLQPNPTAPSGFTLLGAPVVMISDKLLANNVDGTSPMIVGDLSQAVAVFRRNQ  466
            KDS+GRY+LQP+ TAPSG +L+G PVV+I+D L+AN   GT PMI+GD++Q++ V RRNQ
Sbjct  404  KDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQ  463

Query  467  VTAQWDKFDQFSQGLSVIVRNDYKVIDKTAAINVAL  502
            VT+QW+KFD +SQGL+VIVRNDYK ID+ A++ + +
Sbjct  464  VTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEF  499

4) LBP_cg1995 in NC_021224


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  465 bits (1751),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 284/516 (56%), Positives = 388/516 (76%), Gaps = 39/516 (7%)

Query  3    QDRRLTIDAELRAQTPQSETPEDGPAENSADPQPKGSQTSKGKTISGYAIVWNSPSKDLG  62
            +++RLT +AEL A++P+ E  ++              Q + GKTISGYA+    PSKDLG
Sbjct  7    KEKRLTEEAELTADSPKVEKENE-------------KQPTDGKTISGYALKFGQPSKDLG  53

Query  63   GFTEVVTPKALDGVDLSNVLMLNNHDYTQVLASAKAGTLTLETDDKGLHFTAQLPNTSFA  122
            GF EV+TP AL  VDLSNV++L  HDY++ LAS KAGTL L+ DD GLHF A+L +T+++
Sbjct  54   GFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYS  113

Query  123  NDVYEEVQSGNVDSCSFGFDSDDNTDEWTKDDGGNITRTINQVKSLFDVSVVAVPAYDDT  182
            NDVYE++  G VDS SFGF      D   K ++G I R+I+++K+L ++SVV+VPAYD +
Sbjct  114  NDVYENISKGVVDSMSFGFVL--GLDSFDKKEDGTIERSIDKIKALNEISVVTVPAYDSS  171

Query  183  NVQVDTRSYEKFINQ----------------EKEPDNMAKQTIIDPNGNENKTGIPAFEQ  226
            NVQV+ RSYE F+++                +KE++NM K T+ID    ++KT + ++E+
Sbjct  172  NVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNMEK-TLID----NEKTELRGYEE  226

Query  227  YVRTHGETRDGLKTDGVSAVIPKELITPVFQLKQSNYNLAQYATVKQVSSGSGTYPIATS  286
            Y+R++GE RDG+ T   +AV+P E+I  VF+LK+SNYNLAQYATVK VS+G G YP+AT+
Sbjct  227  YIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATN  286

Query  287  RQSAVLATKEELAEIADVNANMFTEVPFDVKTRAGKIALSNEVVEDAEVDIVSEVKNQLQ  346
            +Q AVLATK ELAEI+D++A+MFT V + V TRAGKIALSNEVVED+ V+IV EVK+QL 
Sbjct  287  QQ-AVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLA  345

Query  347  QLVDNTDNTQIMSLLTGTSFTKATATNIDDLKKIFNVTLDPALSKMWLVNQSGFNYLDTL  406
            +LV+NTDN +IM LL   +FTK TA+ +DDLK+++NV+LDPAL+KM ++NQSG+  LDTL
Sbjct  346  KLVENTDNKHIMDLLK--TFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTL  403

Query  407  KDSDGRYLLQPNPTAPSGFTLLGAPVVMISDKLLANNVDGTSPMIVGDLSQAVAVFRRNQ  466
            KDSDGRY+LQP+ TAPSG +L+G PVV+I+D L+AN   GT PMI+GD++Q++ V RRNQ
Sbjct  404  KDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQ  463

Query  467  VTAQWDKFDQFSQGLSVIVRNDYKVIDKTAVINVAL  502
            VT+QW+KFD +SQGL+VIVRNDYK ID+ A + + +
Sbjct  464  VTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEF  499

5) LCAZH_1012 in NC_014334


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  445 bits (1675),  Expect = 4e-126, Method: Compositional matrix adjust.
 Identities = 260/482 (54%), Positives = 370/482 (77%), Gaps = 11/482 (2%)

Query  34   GSKKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLT  93
            ++K +SGYA+ F  PSKDLGGF EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL 
Sbjct  34   DGKTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLK  93

Query  94   LNVDDKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTI  153
            LNVDD GL+FEA L DTT +ND Y+N+  G + +MSF F  + D  +F K + G + R+I
Sbjct  94   LNVDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSI  151

Query  154  KQVKSLFDVSLVAIPAYDDTNVQVDKRSYTEWL-KDHVEDPEQQLPPTEKRKGVNHMTEK  212
             ++K+L ++S+V++PAYD +NVQV+KRSY   + +++  + ++ L +T K +  ++  EK
Sbjct  152  DKIKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNMEK  211

Query  213  TIIDKEEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVINDVWDLKQSDYDLAKYVT  272
            T+ID +E TE R+YE+YIRS GE RDG+TT  A+AVVP EVI +V DLK+S+Y+LA+Y T
Sbjct  212  TLID-NEKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYAT  270

Query  273  VKQVGTPVGTYPIALTNNGVLATKAELADVADVDANMFKGVDYKVATRAGKIYLSNELVE  332
            VK V+   G YP+A  +++VLATKAELA+++D+DA+MF +VDYKV TRAGKI LSNE+VE
Sbjct  271  VKTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVE  330

Query  333  DSEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDLKQTFNVELD  392
            DS V+IV EVK+QL KLV+NTDN +I+ +L         F   T++ LDDLKQ +NV LD
Sbjct  331  DSAVNIVQEVKDQLAKLVENTDNKHIMDLLK-------TFTKKTAATLDDLKQLYNVALD  383

Query  393  PALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANEVLPTDKAG  452
            PAL+  VI+NQ ++  LDTLKDS+GRY+LQP +TAPSGK LFG PV++IA+ +++  KAG
Sbjct  384  PALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAG  443

Query  453  TYRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVA  512
            T+ +I+GD+AQ+IF+A++N+V TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV 
Sbjct  444  TFPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPVV  503

Query  513  AT  514
            + 
Sbjct  504  TP  505

6) LRHM_2792 in NC_017482


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  442 bits (1663),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 263/517 (51%), Positives = 384/517 (75%), Gaps = 18/517 (3%)

Query  2    NQDDVEKRLNPNAGLTAKADDSQGqddpdtkkqddttNGPKKLSGYAVVFNSPSKDLGGF  61
            N+++ EKRL  +A LTA +   +       K ++    + K +SGYA+ F  PSKDLGGF
Sbjct  3    NEEEKEKRLTEEAELTADSPKVE-------KENEKQPTDGKTISGYALKFGQPSKDLGGF  55

Query  62   KEVVDPHAFDHVDLSDVYMVSNHDFSQVLASTKAGTLTLNVDDKGLQFEATLPDTTTASD  121
             EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LNVDD GL+FEA L DTT ++D
Sbjct  56   VEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSND  115

Query  122  AYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNV  181
             Y+N+  G + +MSF F  + D  +F K + G + R+I ++K+L ++S+V++PAYD +NV
Sbjct  116  VYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDKIKALNEISVVTVPAYDSSNV  173

Query  182  QVDKRSYTEWL-KDHVEDPEQQLPPTEKRKGVNHMTEKTIIDKEEHTESRAYEDYIRSMG  240
            QV+KRSY   + +++  + ++ L +T K +  ++  EKT+ID +E TE R+YE+YIRS G
Sbjct  174  QVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNMEKTLID-NEKTELRGYEEYIRSQG  232

Query  241  EQRDGLTTTTAGAVVPKEVINDVWDLKQSDYDLAKYVTVKQVGTPVGTYPIALTNNGVLA  300
            E RDG+TT  A+AVVP EVI +V DLK+S+Y+LA+Y TVK V+   G YP+A  +++VLA
Sbjct  233  EVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATNQQAVLA  292

Query  301  TKKELADVADVDANMFKGVDYKVATRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNTD  360
            TK ELA+++D+DA+MF +VDYKV TRAGKI LSNE+VEDS V+IV EVK+QL KLV+NTD
Sbjct  293  TKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKLVENTD  352

Query  361  NSNIISVLTGKSTTGDNFKHLTGTGLDDLKKTFNIELDPALSLSVIVNQDAFNYLDTLKD  420
            N +I+ +L         F   T++ LDDLK+ +N+ LDPAL+  VI+NQ ++  LDTLKD
Sbjct  353  NKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTLKD  405

Query  421  SQGRYLLQPSITAPSGKQLFGAPVIVVANKVLPTDKVGTYRIIIGDFSQAIFLAQKNEVN  480
            S+GRY+LQP +TAPSGK LFG PV+++A+ +++  K GT+ +I+GD++Q+IF+A++N+V 
Sbjct  406  SDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQVT  465

Query  481  TQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPV  517
            TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV
Sbjct  466  TQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPV  502

7) LGG_02901 in NC_013198


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  442 bits (1663),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 263/517 (51%), Positives = 384/517 (75%), Gaps = 18/517 (3%)

Query  2    NQDDVEKRLNPNAGLTAKADDSQGqddpdtkkqddttNGPKKLSGYAVVFNSPSKDLGGF  61
            N+++ EKRL  +A LTA +   +       K ++    + K +SGYA+ F  PSKDLGGF
Sbjct  3    NEEEKEKRLTEEAELTADSPKVE-------KENEKQPTDGKTISGYALKFGQPSKDLGGF  55

Query  62   KEVVDPHAFDHVDLSDVYMVSNHDFSQVLASTKAGTLTLNVDDKGLQFEATLPDTTTASD  121
             EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LNVDD GL+FEA L DTT ++D
Sbjct  56   VEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSND  115

Query  122  AYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNV  181
             Y+N+  G + +MSF F  + D  +F K + G + R+I ++K+L ++S+V++PAYD +NV
Sbjct  116  VYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDKIKALNEISVVTVPAYDSSNV  173

Query  182  QVDKRSYTEWL-KDHVEDPEQQLPPTEKRKGVNHMTEKTIIDKEEHTESRAYEDYIRSMG  240
            QV+KRSY   + +++  + ++ L +T K +  ++  EKT+ID +E TE R+YE+YIRS G
Sbjct  174  QVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNMEKTLID-NEKTELRGYEEYIRSQG  232

Query  241  EQRDGLTTTTAGAVVPKEVINDVWDLKQSDYDLAKYVTVKQVGTPVGTYPIALTNNGVLA  300
            E RDG+TT  A+AVVP EVI +V DLK+S+Y+LA+Y TVK V+   G YP+A  +++VLA
Sbjct  233  EVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATNQQAVLA  292

Query  301  TKKELADVADVDANMFKGVDYKVATRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNTD  360
            TK ELA+++D+DA+MF +VDYKV TRAGKI LSNE+VEDS V+IV EVK+QL KLV+NTD
Sbjct  293  TKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKLVENTD  352

Query  361  NSNIISVLTGKSTTGDNFKHLTGTGLDDLKKTFNIELDPALSLSVIVNQDAFNYLDTLKD  420
            N +I+ +L         F   T++ LDDLK+ +N+ LDPAL+  VI+NQ ++  LDTLKD
Sbjct  353  NKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTLKD  405

Query  421  SQGRYLLQPSITAPSGKQLFGAPVIVVANKVLPTDKVGTYRIIIGDFSQAIFLAQKNEVN  480
            S+GRY+LQP +TAPSGK LFG PV+++A+ +++  K GT+ +I+GD++Q+IF+A++N+V 
Sbjct  406  SDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQVT  465

Query  481  TQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPV  517
            TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV
Sbjct  466  TQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPV  502

8) LC705_00696 in NC_013199


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  441 bits (1662),  Expect = 4e-125, Method: Compositional matrix adjust.
 Identities = 268/520 (52%), Positives = 386/520 (75%), Gaps = 18/520 (3%)

Query  2    NQDDVEKRLNPNAGLTAKADDSKGqddpdtqqqkdttsspkkLSGYAVVFNSPSKDLGGF  61
            N+++ EKRL  +A LTA  D +K       +++    +  K +SGYA+ F  PSKDLGGF
Sbjct  3    NEEEKEKRLTEEAELTA--DSPK-----VEKENEKQPTDGKTISGYALKFGQPSKDLGGF  55

Query  62   KEVVDPHAFDDVDLSDVYMVSNHDFSQVLASTKAGTLTLNVDDKGLQFEATLPDTTTAND  121
             EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LNVDD GL+FEA L DTT +ND
Sbjct  56   VEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSND  115

Query  122  AYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNV  181
             Y+N+  G + +MSF F  + D  +F K + G + R+I ++K+L ++S+V++PAYD +NV
Sbjct  116  VYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDKIKALNEISVVTVPAYDSSNV  173

Query  182  QVDKRSYTEWL-KDHVEDPEQQLPPTEKRKGVNHMTEKTIIDNKEHTESRAYEDYIRSMG  240
            QV+KRSY   + +++  + ++ L +T K +  ++  EKT+IDN E TE R+YE+YIRS G
Sbjct  174  QVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNMEKTLIDN-EKTELRGYEEYIRSQG  232

Query  241  EQRDGLTTTTAGAVVPKEVINDVFDLKESDYDLAKYVTVKQVGTPVGTYPIALTNNGVLA  300
            E RDG+TT  A+AVVP EVI +VFDLK S+Y+LA+Y TVK V+   G YP+A  +++VLA
Sbjct  233  EVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATNQQAVLA  292

Query  301  TKAELADIPEIDSNLFRGVDYKVATRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNTD  360
            TKAELA+I +ID+++F +VDYKV TRAGKI LSNE+VEDS V+IV EVK+QL KLV+NTD
Sbjct  293  TKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKLVENTD  352

Query  361  NSNIISVLTGKTGTNDNFKHITGTGLDDLKKTFNIELDPALSLSVIVNQDAFNYLDTLKD  420
            N +I+ +L         F   T++ LDDLK+ +N+ LDPAL+  VI+NQ ++  LDTLKD
Sbjct  353  NKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTLKD  405

Query  421  SEGRYLLQPSITAPSGKQLFGAPVIVVANKVLPTDKVGTYRIIIGDFSQAIFLAQKNEVN  480
            S+GRY+LQP +TAPSGK LFG PV+++A+ +++  K GT+ +I+GD++Q+IF+A++N+V 
Sbjct  406  SDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQVT  465

Query  481  TQWERFDSYSQGLAVVIRNDYEVIDPDAARIVDITPVAAT  520
            TQWE+FD YSQGLAV++RNDY  ID +A+  +++TPV + 
Sbjct  466  TQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPVVTP  505

9) LBPG_01500 in NC_022112


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  441 bits (1661),  Expect = 5e-125, Method: Compositional matrix adjust.
 Identities = 256/477 (54%), Positives = 366/477 (77%), Gaps = 11/477 (2%)

Query  36   KKLSGYAVVFNSPSKDLGGFKEVVDPHAFDDVDLSDVYMVSNHDFSQVLASTKAGTLTLN  95
            K +SGYA+ F  PSKDLGGF EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LN
Sbjct  36   KTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLN  95

Query  96   VDDKGLQFEATLPDTTTASDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQ  155
            VDD GL+FEA L DTT ++D Y+N+  G + +MSF F  + D  +F K + G + R+I +
Sbjct  96   VDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDK  153

Query  156  VKSLFDVSLVAIPAYDETNVQVDKRSYTEWL-KDHVEDPEQQLPPTEKRKGVNHMTEKTI  214
            +K+L ++S+V++PAYD +NVQV+KRSY   + +++  + ++ L +T K +  ++  EKT+
Sbjct  154  IKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNMEKTL  213

Query  215  IDKEEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVINDVWDLKQSDYDLAKYVTVK  274
            ID +E TE R+YE+YIRS GE RDG+TT  A+AVVP EVI +V DLK+S+Y+LA+Y TVK
Sbjct  214  ID-NEKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVK  272

Query  275  QVGTPVGTYPIALTNNGVLATKEELADVADVDANMFKGVDYKVATRAGKIYLSNELVEDS  334
             V+   G YP+A  +++VLATK ELA+++D+DA+MF +VDYKV TRAGKI LSNE+VEDS
Sbjct  273  TVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDS  332

Query  335  EVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGSNDNFKHITGTGLDDIKQTFNVELDPA  394
             V+IV EVK+QL KLV+NTDN +I+ +L         F   T++ LDD+KQ +NV LDPA
Sbjct  333  AVNIVQEVKDQLAKLVENTDNKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDPA  385

Query  395  LSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGTY  454
            L+  VI+NQ ++  LDTLKDS+GRY+LQP +TAPSGK LFG PV++IA+ +++  KAGT+
Sbjct  386  LNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTF  445

Query  455  RIIIGDFSQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPV  511
             +I+GD++Q+IF+A++N+V TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV
Sbjct  446  PMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPV  502

10) JDM1_0046 in NC_012984


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  437 bits (1646),  Expect = 8e-124, Method: Compositional matrix adjust.
 Identities = 284/527 (54%), Positives = 388/527 (74%), Gaps = 43/527 (8%)

Query  3    QDRRLTIDAELRAQMPQSETPEDGPAENSADPQSKGSQTSKGKTISGYAIVWNSPSKDLG  62
            +++RLT +AEL A+ P+ E  ++              Q + GKTISGYA+    PSKDLG
Sbjct  7    KEKRLTEEAELTADSPKVEKENE-------------KQPTDGKTISGYALKFGQPSKDLG  53

Query  63   GFTEVVTPKALDGVDLSNVLMLNNHDYTQVLASVKAGTLTLETDDKGLHFTAQLPNTSFA  122
            GF EV+TP AL  VDLSNV++L  HDY++ LASVKAGTL L+ DD GLHF A+L +T+++
Sbjct  54   GFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYS  113

Query  123  NDVYEEVQSGNVdscsfgfdsdddtdewtkddggNITRTINQVKSLFDVSVVAVPAYDDT  182
            NDVYE++  G VDS SFGF  + D+ +   D+   I R+I+++K+L ++SVV+VPAYD +
Sbjct  114  NDVYENISKGVVDSMSFGFVLGLDSFDKKEDG--TIERSIDKIKALNEISVVTVPAYDSS  171

Query  183  NVQVDTRSYEKCINQ----------------EKEPDNMAKQTIIDPnnndngngnKTGIP  226
            NVQV+ RSYE  +++                +KE++NM K T+ID +        KT + 
Sbjct  172  NVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNMEK-TLIDNE--------KTELR  222

Query  227  AFEQYVRTHGETRDGLKTDGASAVIPKELITPVFQLKQSNYNLAQYATVKQVSSGSGTYP  286
            ++E+Y+R++GE RDG+ T  A+AV+P E+I  VF+LK+SNYNLAQYATVK VS+G G YP
Sbjct  223  GYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYP  282

Query  287  IATSQQSAVLATKDELADIADVDANMFTEVPFDVKTRAGKIALSNEVVEDAEVDIVSEVK  346
            +AT+QQ AVLATK ELA+I+D+DA+MFT V + V TRAGKIALSNEVVED+ V+IV EVK
Sbjct  283  VATNQQ-AVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVK  341

Query  347  TQLQQLVDNTDNTQIMSLLTGTSFAKATAANIDDLKKIFNVTLDPALSKMWLVNQSGFNY  406
             QL +LV+NTDN +IM LL   +F+K TAA +DDLK+++NV+LDPAL+KM ++NQSG+  
Sbjct  342  DQLAKLVENTDNKHIMDLLK--TFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYH  399

Query  407  LDTLKDSEGRYLLQTNPTAPSGFTLLGAPVVMISDKLLANNADGTFPMIAGDLSQAVAVF  466
            LDTLKDS+GRY+LQ + TAPSG +L+G PVV+I+D L+AN   GTFPMI GD++Q++ V 
Sbjct  400  LDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVA  459

Query  467  RRNQVTAQWDKFDQFSQGLSIIVRNDYEVIDKTAVINVALGTVTAGK  513
            RRNQVT+QW+KFD +SQGL++IVRNDY  ID+ A + + +  V + K
Sbjct  460  RRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPVVTPK  506

11) LOCK908_1092 in NC_021725


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  437 bits (1645),  Expect = 9e-124, Method: Compositional matrix adjust.
 Identities = 271/521 (53%), Positives = 382/521 (74%), Gaps = 29/521 (5%)

Query  2    NQDDVEKRLNPNAGLTAKADDSKGqddpdtqqqkdttsspkkLSGYAVVFNSPSKDLGGF  61
            N+++ EKRL  +A LTA  D +K       +++    +  K +SGYA+ F  PSKDLGGF
Sbjct  3    NEEEKEKRLTEEAELTA--DSPK-----VEKENEKQPTDGKTISGYALKFGQPSKDLGGF  55

Query  62   KEVVDPHAFDDVDLSDVYMVSNHDFSQVLASTKAGTLTLNVDDKGLQFEATLPDTTTAND  121
             EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LNVDD GL+FEA L DTT +ND
Sbjct  56   VEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSND  115

Query  122  AYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQVKSLFDVSLVAIPAYDDTNV  181
             Y+N+  G + +MSF F  + D  +F K + G + R+I ++K+L ++S+V++PAYD +NV
Sbjct  116  VYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDKIKALNEISVVTVPAYDSSNV  173

Query  182  QVDKRSYTEWLKTN-----------TEQPEKGDKTMTEKTIIDNKEHTESRAYEDYIRSM  230
            QV+KRSY   +  N           T +++K  + M EKT+IDN E TE R+YE+YIRS 
Sbjct  174  QVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNM-EKTLIDN-EKTELRGYEEYIRSQ  231

Query  231  GEQRDGITTTTAGAVVPKEVINDVFDLKESDYDLAKYVTVKQVGTPVGTYPIALTNNGVL  290
            GE RDG+TT  A+AVVP EVI +VFDLK S+Y+LA+Y TVK V+   G YP+A  +++VL
Sbjct  232  GEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATNQQAVL  291

Query  291  ATKAELADIPDIDSNLFRGVDYKVASRAGKIYLSNELVEDSEVDIVAEVKNQLKKLVQNT  350
            ATKAELA+I DID+++F +VDYKV +RAGKI LSNE+VEDS V+IV EVK+QL KLV+NT
Sbjct  292  ATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKLVENT  351

Query  351  DNSNIISVLTGKTGTNDNFKHITGTGLDDLKKTFNIELDPALSLSVIVNQDAFNYLDTLK  410
            DN +I+ +L         F   T++ LDDLK+ +N+ LDPAL+  VI+NQ ++  LDTLK
Sbjct  352  DNKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTLK  404

Query  411  DSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGTYRIIIGDFAQAIFLAQKNEV  470
            DS+GRY+LQP +TAPSGK LFG PV++IA+ +++  KAGT+ +I+GD+AQ+IF+A++N+V
Sbjct  405  DSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQV  464

Query  471  NTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAAT  511
             TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV + 
Sbjct  465  TTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPVVTP  505

12) lp_2463 in NC_004567


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  435 bits (1639),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 278/510 (55%), Positives = 384/510 (76%), Gaps = 27/510 (5%)

Query  1    MTPNCEHKRRSQKHPKTGPAENSADPQPKDSQTSKGKTISGYAIVWNSPSKDLGGFTEVV  60
            M  + E  +R   ++   +     + + ++ Q + GKTISGYA+    PSKDLGGF EV+
Sbjct  1    MNNEEEKEKRLTEEAELTADSPKVEKE-NEKQPTDGKTISGYALKFGQPSKDLGGFVEVI  59

Query  61   TPKALDGVDLSNVLMLNNHDYTQVLASVKAGTLTLETDDKGLHFTAQLPNTSFANDVYEE  120
            TP AL  VDLSNV++L  HDY++ LASVKAGTL L+ DD GLHF A+L +T+++NDVYE+
Sbjct  60   TPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSNDVYEN  119

Query  121  VQSGNVdscsfgfdsdddtdewtkddggNITRTINQVKSLFDVSVVAVPAYDDTNVQVDT  180
            +  G VDS SFGF  + D+ +   D+   I R+I+++K+L ++SVV+VPAYD +NVQV+ 
Sbjct  120  ISKGVVDSMSFGFVLGLDSFDKKEDG--TIERSIDKIKALNEISVVTVPAYDSSNVQVNK  177

Query  181  RSYEKFINQ----------------EKEPDNMAKQTIIDPNGNENKTGIPAFEQYVRTHG  224
            RSYE F+++                +KE++NM K T+ID    ++KT + ++E+Y+R++G
Sbjct  178  RSYESFMSNNQAKQTNNSLESTSKAQKESNNMEK-TLID----NEKTELRGYEEYIRSQG  232

Query  225  ETRDGLKTDGVSAVIPKELITPVFQLKQSNYNLAQYATVKQVSSGSGTYPIATSRQSAVL  284
            E RDG+ T   +AV+P E+I  VF+LK+SNYNLAQYATVK VS+G G YP+AT++Q AVL
Sbjct  233  EVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATNQQ-AVL  291

Query  285  ATKEELAEIADINANMFTEVPFDVKTRAGKIALSNEVVEDAEVDIVGEVKNQLQQLVDNT  344
            ATK ELAEI+DI+A+MFT V + V TRAGKIALSNEVVED+ V+IV EVK+QL +LV+NT
Sbjct  292  ATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKLVENT  351

Query  345  DNTQIMSLLTGTSFTKATATNIDDLKKVFNVTLDPALSKMWLVNQSGFNYLDTLKDSEGR  404
            DN +IM LL   +FTK TA+ +DDLK+++NV+LDPAL+KM ++NQSG+  LDTLKDS+GR
Sbjct  352  DNKHIMDLLK--TFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTLKDSDGR  409

Query  405  YLLQPNPTAPSGFTLLGAPVVMISDKLLANNVDGTSPMIVGDLSQAVAVFRRNQVTAQWD  464
            Y+LQP+ TAPSG +L+G PVV+I+D L+AN   GT PMI+GD++Q++ V RRNQVT+QW+
Sbjct  410  YILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQVTTQWE  469

Query  465  KFDQFSQGLSVIVRNDYKVIDKTAVINVAL  494
            KFD +SQGL+VIVRNDYK ID+ A + + +
Sbjct  470  KFDYYSQGLAVIVRNDYKKIDQNASVYIEF  499

13) LC705_01075 in NC_013199


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  434 bits (1636),  Expect = 5e-123, Method: Compositional matrix adjust.
 Identities = 258/481 (54%), Positives = 362/481 (76%), Gaps = 22/481 (4%)

Query  36   KKLSGYAVVFNSPSKDLGGFKEVVDPHAFDDVDLSDVYMVSNHDFSQVLASTKAGTLTLN  95
            K +SGYA+ F  PSKDLGGF EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LN
Sbjct  36   KTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLN  95

Query  96   VDDKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQ  155
            VDD GL+FEA L DTT +ND Y+N+  G + +MSF F  + D  +F K + G + R+I +
Sbjct  96   VDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDK  153

Query  156  VKSLFDVSLVAIPAYDDTNVQVDKRSYTEWLKTN-----------TEQPEKGDKTMTEKT  204
            +K+L ++S+V++PAYD +NVQV+KRSY   +  N           T +++K  + M EKT
Sbjct  154  IKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNM-EKT  212

Query  205  IIDNKEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVINDVWDLKQSDYDLAKYVTV  264
            +IDN E TE R+YE+YIRS GE RDG+TT  A+AVVP EVI +V DLK+S+Y+LA+Y TV
Sbjct  213  LIDN-EKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATV  271

Query  265  KQVGTPVGTYPIALTNNGVLATKAELAHIPEIDSNLFRGVDYKVATRAGKIYLSNELVED  324
            K V+   G YP+A  +++VLATKAELA+I +ID+++F +VDYKV TRAGKI LSNE+VED
Sbjct  272  KTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVED  331

Query  325  SEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDIKQTFNVELDP  384
            S V+IV EVK+QL KLV+NTDN +I+ +L         F   T++ LDD+KQ +NV LDP
Sbjct  332  SAVNIVQEVKDQLAKLVENTDNKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDP  384

Query  385  ALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGT  444
            AL+  VI+NQ ++  LDTLKDS+GRY+LQP +TAPSGK LFG PV++IA+ +++  KAGT
Sbjct  385  ALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGT  444

Query  445  YRIIIGDFSQAIFLAQKNEVNTQWQRFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAA  504
            + +I+GD++Q+IF+A++N+V TQW++FD YSQGLAV++RNDY  +D +A+  +++TPV +
Sbjct  445  FPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPVVT  504

Query  505  T  505
             
Sbjct  505  P  505

14) LCBD_3114 in NC_017474


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  431 bits (1621),  Expect = 8e-122, Method: Compositional matrix adjust.
 Identities = 260/483 (54%), Positives = 361/483 (75%), Gaps = 23/483 (4%)

Query  46   KKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLTLN  105
            K +SGYA+ F  PSKDLGGF EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LN
Sbjct  36   KTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLN  95

Query  106  VDGKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQ  165
            VD+ GL+FEA L DTT +ND Y+N+  G + +MSF F  + D  +F K + G + R+I +
Sbjct  96   VDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDK  153

Query  166  VKSLFDVSLVAIPAYDDTNVQVGKRSYTEWLKTN-----------TEQPEKGDKTMTEKT  214
            +K+L ++S+V++PAYD +NVQV KRSY   +  N           T +++K  + M EKT
Sbjct  154  IKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNM-EKT  212

Query  215  IIDNKEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVIEDVWNLKESDYDLAKYVTV  274
            +IDN E TE R+YE+YIRS GE RDG+TT  A+AVVP EVI +V +LK S+Y+LA+Y TV
Sbjct  213  LIDN-EKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATV  271

Query  275  KQVGTPVGTYPIALTNNGVLATKAELADVPEIDATLFRGVDYKVATRAGKIYLSNELVED  334
            K V+   G YP+A  +++VLATKAELA++ +IDA +F +VDYKV TRAGKI LSNE+VED
Sbjct  272  KTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVED  331

Query  335  SEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDIKQTFNIELDP  394
            S V+IV EVK+QL KLV+NTDN +I+ +L         F   T++ LDD+KQ +N+ LDP
Sbjct  332  SAVNIVQEVKDQLAKLVENTDNKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDP  384

Query  395  ALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGT  454
            AL+  VI+NQ ++  LDTLKDS+GRY+LQP +TAPSGK LFG PV++IA+ +++  KAGT
Sbjct  385  ALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGT  444

Query  455  YRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAA  514
            + +I+GD+AQ+IF+A++N+V TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV  
Sbjct  445  FPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPV-V  503

Query  515  TPK  517
            TPK
Sbjct  504  TPK  506

15) orf44 in NC_010999


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  431 bits (1621),  Expect = 8e-122, Method: Compositional matrix adjust.
 Identities = 260/483 (54%), Positives = 361/483 (75%), Gaps = 23/483 (4%)

Query  46   KKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLTLN  105
            K +SGYA+ F  PSKDLGGF EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LN
Sbjct  36   KTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLN  95

Query  106  VDGKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQ  165
            VD+ GL+FEA L DTT +ND Y+N+  G + +MSF F  + D  +F K + G + R+I +
Sbjct  96   VDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDK  153

Query  166  VKSLFDVSLVAIPAYDDTNVQVGKRSYTEWLKTN-----------TEQPEKGDKTMTEKT  214
            +K+L ++S+V++PAYD +NVQV KRSY   +  N           T +++K  + M EKT
Sbjct  154  IKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNM-EKT  212

Query  215  IIDNKEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVIEDVWNLKESDYDLAKYVTV  274
            +IDN E TE R+YE+YIRS GE RDG+TT  A+AVVP EVI +V +LK S+Y+LA+Y TV
Sbjct  213  LIDN-EKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATV  271

Query  275  KQVGTPVGTYPIALTNNGVLATKAELADVPEIDATLFRGVDYKVATRAGKIYLSNELVED  334
            K V+   G YP+A  +++VLATKAELA++ +IDA +F +VDYKV TRAGKI LSNE+VED
Sbjct  272  KTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVED  331

Query  335  SEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDIKQTFNIELDP  394
            S V+IV EVK+QL KLV+NTDN +I+ +L         F   T++ LDD+KQ +N+ LDP
Sbjct  332  SAVNIVQEVKDQLAKLVENTDNKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDP  384

Query  395  ALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGT  454
            AL+  VI+NQ ++  LDTLKDS+GRY+LQP +TAPSGK LFG PV++IA+ +++  KAGT
Sbjct  385  ALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGT  444

Query  455  YRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAA  514
            + +I+GD+AQ+IF+A++N+V TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV  
Sbjct  445  FPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPV-V  503

Query  515  TPK  517
            TPK
Sbjct  504  TPK  506

16) LC2W_3097 in NC_017473


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  431 bits (1621),  Expect = 8e-122, Method: Compositional matrix adjust.
 Identities = 260/483 (54%), Positives = 361/483 (75%), Gaps = 23/483 (4%)

Query  46   KKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLTLN  105
            K +SGYA+ F  PSKDLGGF EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LN
Sbjct  36   KTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLN  95

Query  106  VDGKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQ  165
            VD+ GL+FEA L DTT +ND Y+N+  G + +MSF F  + D  +F K + G + R+I +
Sbjct  96   VDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDK  153

Query  166  VKSLFDVSLVAIPAYDDTNVQVGKRSYTEWLKTN-----------TEQPEKGDKTMTEKT  214
            +K+L ++S+V++PAYD +NVQV KRSY   +  N           T +++K  + M EKT
Sbjct  154  IKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNM-EKT  212

Query  215  IIDNKEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVIEDVWNLKESDYDLAKYVTV  274
            +IDN E TE R+YE+YIRS GE RDG+TT  A+AVVP EVI +V +LK S+Y+LA+Y TV
Sbjct  213  LIDN-EKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATV  271

Query  275  KQVGTPVGTYPIALTNNGVLATKAELADVPEIDATLFRGVDYKVATRAGKIYLSNELVED  334
            K V+   G YP+A  +++VLATKAELA++ +IDA +F +VDYKV TRAGKI LSNE+VED
Sbjct  272  KTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVED  331

Query  335  SEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDIKQTFNIELDP  394
            S V+IV EVK+QL KLV+NTDN +I+ +L         F   T++ LDD+KQ +N+ LDP
Sbjct  332  SAVNIVQEVKDQLAKLVENTDNKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDP  384

Query  395  ALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGT  454
            AL+  VI+NQ ++  LDTLKDS+GRY+LQP +TAPSGK LFG PV++IA+ +++  KAGT
Sbjct  385  ALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGT  444

Query  455  YRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAA  514
            + +I+GD+AQ+IF+A++N+V TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV  
Sbjct  445  FPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPV-V  503

Query  515  TPK  517
            TPK
Sbjct  504  TPK  506

17) BN194_30330 in NC_018641


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  431 bits (1621),  Expect = 8e-122, Method: Compositional matrix adjust.
 Identities = 260/483 (54%), Positives = 361/483 (75%), Gaps = 23/483 (4%)

Query  46   KKLSGYAVVFNSPSKDLGGFKEVVDPHAFDNVDLSDVYMVSNHDFSQVLASTKAGTLTLN  105
            K +SGYA+ F  PSKDLGGF EV+ P+A+ +VDLS+V+++  HD+S+ LAS KAGTL LN
Sbjct  36   KTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLN  95

Query  106  VDGKGLQFEATLPDTTTANDAYNNVQAGNLSAMSFTFNAAPDGDTFTKDDSGQVIRTIKQ  165
            VD+ GL+FEA L DTT +ND Y+N+  G + +MSF F  + D  +F K + G + R+I +
Sbjct  96   VDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFGFVLGLD--SFDKKEDGTIERSIDK  153

Query  166  VKSLFDVSLVAIPAYDDTNVQVGKRSYTEWLKTN-----------TEQPEKGDKTMTEKT  214
            +K+L ++S+V++PAYD +NVQV KRSY   +  N           T +++K  + M EKT
Sbjct  154  IKALNEISVVTVPAYDSSNVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNM-EKT  212

Query  215  IIDNKEHTESRAYEDYIRSMGEQRDGLTTTTAGAVVPKEVIEDVWNLKESDYDLAKYVTV  274
            +IDN E TE R+YE+YIRS GE RDG+TT  A+AVVP EVI +V +LK S+Y+LA+Y TV
Sbjct  213  LIDN-EKTELRGYEEYIRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATV  271

Query  275  KQVGTPVGTYPIALTNNGVLATKAELADVPEIDATLFRGVDYKVATRAGKIYLSNELVED  334
            K V+   G YP+A  +++VLATKAELA++ +IDA +F +VDYKV TRAGKI LSNE+VED
Sbjct  272  KTVSNGQGKYPVATNQQAVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVED  331

Query  335  SEVDIVAEVKNQLKKLVQNTDNSNIISVLTGKTGTNDNFKHITGTGLDDIKQTFNIELDP  394
            S V+IV EVK+QL KLV+NTDN +I+ +L         F   T++ LDD+KQ +N+ LDP
Sbjct  332  SAVNIVQEVKDQLAKLVENTDNKHIMDLLK-------TFTKKTAATLDDLKQLYNVALDP  384

Query  395  ALSLSVIVNQDAFNYLDTLKDSEGRYLLQPSITAPSGKQLFGAPVIVIANKVLPTDKAGT  454
            AL+  VI+NQ ++  LDTLKDS+GRY+LQP +TAPSGK LFG PV++IA+ +++  KAGT
Sbjct  385  ALNKMVILNQSGYYHLDTLKDSDGRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGT  444

Query  455  YRIIIGDFAQAIFLAQKNEVNTQWERFDSYSQGLAVVIRNDYEVVDPDAARIVDITPVAA  514
            + +I+GD+AQ+IF+A++N+V TQWE+FD YSQGLAV++RNDY  +D +A+  +++TPV  
Sbjct  445  FPMIMGDIAQSIFVARRNQVTTQWEKFDYYSQGLAVIVRNDYKKIDQNASVYIEFTPV-V  503

Query  515  TPK  517
            TPK
Sbjct  504  TPK  506

18) LRI_1512 in NC_021494


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  424 bits (1598),  Expect = 5e-120, Method: Compositional matrix adjust.
 Identities = 275/510 (54%), Positives = 381/510 (75%), Gaps = 36/510 (7%)

Query  28   SDKQDKTDNNPQPAKTAQNSP---KKLSGYAIVWNTPSKDLGGFKEVVSPDALKGVDLSN  84
            ++  + T ++P+  K  ++ P   K +SGYA+    PSKDLGGF EV++P+ALK VDLSN
Sbjct  12   TEEAELTADSPKVEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVITPEALKEVDLSN  71

Query  85   VLMLNDHDYTQVLASVKAGTLKLTPDDKGLYFEATLPDTTTANDVFANVKAGNLDSCSFS  144
            V++L +HDY++ LASVKAGTLKL  DD GL FEA L DTT +NDV+ N+  G +DS SF+
Sbjct  72   VFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTDTTYSNDVYENISKGVVDSMSFG  131

Query  145  FDVDDGSDKWEKDDQGNITRTINQIKDLFDVSVVAVPAYDSTNVDADNSDNQNVNVNTRS  204
            F +  G D  +K ++G I R+I++IK L ++SVV+VPAYDS+NV+          VN RS
Sbjct  132  FVL--GLDSFDKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQ----------VNKRS  179

Query  205  YENFIKGENKKMT-----------------EKTIIDNNEKTEIRSFEDFIRSHGEMRDGL  247
            YE+F+  ++ K T                 EKT+IDN EKTE+R++E++IRS+GE+RDG+
Sbjct  180  YESFMSNNQAKQTNNSLESTSKAQKESNNMEKTLIDN-EKTELRGYEEYIRSQGEVRDGV  238

Query  248  ATSGATAVIPEEVVTPVLELKNSKYNLAQYATVKTVSAGSGHYPIAKRNNKATLATKEEL  307
            +T  A+AV+PEEV+  V++LK S+YNLAQYATVKTVS G G YP+A  N++A LATK EL
Sbjct  239  TTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVAT-NQQAVLATKAEL  297

Query  308  AEIADVDANMFEDVPFDVKTRAGKIALSNeivedadvdivaevKNQLQKLVDNTDNQNIM  367
            AEI+D+DA+MF  V + V TRAGKIALSNE+VED+ V+IV EVK+QL KLV+NTDN++IM
Sbjct  298  AEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKLVENTDNKHIM  357

Query  368  KVLTSDPFKKENATSTDDLKKIFNVELDPALNKMWLVNQSGFNYLDTLKDSEGRYLLQPN  427
             +L +  F K  A++ DDLK+++NV LDPALNKM ++NQSG+  LDTLKDS+GRY+LQP+
Sbjct  358  DLLKT--FTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTLKDSDGRYILQPD  415

Query  428  PTAASGFSLFGAPVVMISDAVMPNNADGSFPMIAGDISEAVAVFRRSQLLAQWDKFDQFA  487
             TA+SG SLFG PVV+I+D++ +N   G+FPMI GDI++++ V RR+Q+ +QW+KFD ++
Sbjct  416  VTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQVTTQWEKFDYYS  475

Query  488  QGLSVIVRNDYQPISADAAINISLSKGATP  517
            QGL+VIVRNDY+ I  +A++ I ++   TP
Sbjct  476  QGLAVIVRNDYKKIDQNASVYIEFTPVVTP  505

19) Lreu_0672 in NC_009513


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  409 bits (1539),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 269/506 (54%), Positives = 378/506 (75%), Gaps = 34/506 (6%)

Query  2    EKRLTTNAGLQTVSPKEDPTKDQQDNQDETQASQPNTVEGYALLFNQPSKDLGGFVEVID  61
            EKRLT +A L + SPK        ++++E Q+++ +T+ GYAL F QPSKDLGGFVEVI 
Sbjct  8    EKRLTEEAELTADSPK-------VEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVIT  60

Query  62   PSALDNVDLSNVVMLDQHDYTKPLASVKAGSLQLDVDDKGLHFKATIDPSVSYASDTLNN  121
            P AL +VDLSNV +L  HDY+KPLASVKAG+L+L+VDD GLHF A +    +Y++D  +N
Sbjct  61   PEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAEL-TDTTYSNDVYEN  119

Query  122  VKNGNINSMSFRFDVDDGSDSWTRDDNGQITRTVNQIKDLFEVSTVTVPSYDQTNVDVDK  181
            + +G ++SMSF F +  G DS  + ++G I R++++IK L E+S VTVP+YD +NV+V+K
Sbjct  120  ISKGVVDSMSFGFVL--GLDSFDKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQVNK  177

Query  182  TSIRSYNQFIESEEHNKMQHTILDPKNNTEQPAN---------------AFESFIRSRGE  226
               RSY+ F+ S+++ K  +  L++ +++++ +N               ++E +IRS+GE
Sbjct  178  ---RSYESFM-SNNQAKQTNNSLESTSKAQKESNNMEKTLIDNEKTELRGYEEYIRSQGE  233

Query  227  TRDGLTTKGAEAVIPEEVVTPVLDLKNSAYNLAKYATVKTVGTGSGHYPIATRYNTAVLT  286
             RDG+TT  A AV+PEEV+  V+DLK S YNLA+YATVKTV+ G G YP+AT  + AVL+
Sbjct  234  VRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATN-QQAVLA  292

Query  287  TKEEQAEIADVDANMFEDVKFDVKTRAGKIALsnevvddsevdivsevKNQLQKLVDNTD  346
            TK E AEI+D+DA+MF  V + V TRAGKIALSNEVV+DS V+IV EVK+QL KLV+NTD
Sbjct  293  TKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKLVENTD  352

Query  347  NAEIIKVLQGDNFTKKTVANVDDLKQVFNVDLDPALQSTSTWLVNQSAFQVLDTLKDNEG  406
            N +I+ +L+   FTKKT A +DDLKQ++NV LDPAL+     ++NQS++  LDTLKD++G
Sbjct  353  NKHIMDLLK--TFTKKTAATLDDLKQLYNVALDPALNKMV--ILNQSGYYHLDTLKDSDG  408

Query  407  RYLLQPDVTAPSGFSLLGQPVVKISNKFLPDNTDGSHPMILGDISEAVAVFRRNQVTAQW  466
            RY+LQPDVTAPSG SL+G PVV I++ ++++   G+ PMI+GDI++++ V RRNQVT+QW
Sbjct  409  RYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQVTTQW  468

Query  467  DKFDSYSQGLSVIVRNDYQPISNDAA  492
            +KFD YSQGL+VIVRNDY+ I ++A+
Sbjct  469  EKFDYYSQGLAVIVRNDYKKIDQNAS  494

20) LAR_0646 in NC_010609


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  409 bits (1539),  Expect = 2e-115, Method: Compositional matrix adjust.
 Identities = 269/506 (54%), Positives = 378/506 (75%), Gaps = 34/506 (6%)

Query  2    EKRLTTNAGLQTVSPKEDPTKDQQDNQDETQASQPNTVEGYALLFNQPSKDLGGFVEVID  61
            EKRLT +A L + SPK        ++++E Q+++ +T+ GYAL F QPSKDLGGFVEVI 
Sbjct  8    EKRLTEEAELTADSPK-------VEKENEKQPTDGKTISGYALKFGQPSKDLGGFVEVIT  60

Query  62   PSALDNVDLSNVVMLDQHDYTKPLASVKAGSLQLDVDDKGLHFKATIDPSVSYASDTLNN  121
            P AL +VDLSNV +L  HDY+KPLASVKAG+L+L+VDD GLHF A +    +Y++D  +N
Sbjct  61   PEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAEL-TDTTYSNDVYEN  119

Query  122  VKNGNINSMSFRFDVDDGSDSWTRDDNGQITRTVNQIKDLFEVSTVTVPSYDQTNVDVDK  181
            + +G ++SMSF F +  G DS  + ++G I R++++IK L E+S VTVP+YD +NV+V+K
Sbjct  120  ISKGVVDSMSFGFVL--GLDSFDKKEDGTIERSIDKIKALNEISVVTVPAYDSSNVQVNK  177

Query  182  TSIRSYNQFIESEEHNKMQHTILDPKNNTEQPAN---------------AFESFIRSRGE  226
               RSY+ F+ S+++ K  +  L++ +++++ +N               ++E +IRS+GE
Sbjct  178  ---RSYESFM-SNNQAKQTNNSLESTSKAQKESNNMEKTLIDNEKTELRGYEEYIRSQGE  233

Query  227  TRDGLTTKGAEAVIPEEVVTPVLDLKNSAYNLAKYATVKTVGTGSGHYPIATRYNTAVLT  286
             RDG+TT  A AV+PEEV+  V+DLK S YNLA+YATVKTV+ G G YP+AT  + AVL+
Sbjct  234  VRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATN-QQAVLA  292

Query  287  TKEEQAEIADVDANMFEDVKFDVKTRAGKIALsnevvddsevdivsevKNQLQKLVDNTD  346
            TK E AEI+D+DA+MF  V + V TRAGKIALSNEVV+DS V+IV EVK+QL KLV+NTD
Sbjct  293  TKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKLVENTD  352

Query  347  NAEIIKVLQGDNFTKKTVANVDDLKQVFNVDLDPALQSTSTWLVNQSAFQVLDTLKDNEG  406
            N +I+ +L+   FTKKT A +DDLKQ++NV LDPAL+     ++NQS++  LDTLKD++G
Sbjct  353  NKHIMDLLK--TFTKKTAATLDDLKQLYNVALDPALNKMV--ILNQSGYYHLDTLKDSDG  408

Query  407  RYLLQPDVTAPSGFSLLGQPVVKISNKFLPDNTDGSHPMILGDISEAVAVFRRNQVTAQW  466
            RY+LQPDVTAPSG SL+G PVV I++ ++++   G+ PMI+GDI++++ V RRNQVT+QW
Sbjct  409  RYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAGTFPMIMGDIAQSIFVARRNQVTTQW  468

Query  467  DKFDSYSQGLSVIVRNDYQPISNDAA  492
            +KFD YSQGL+VIVRNDY+ I ++A+
Sbjct  469  EKFDYYSQGLAVIVRNDYKKIDQNAS  494

21) PECL_601 in NC_016605


> NC_017960_P1|3|G3|389869310|YP_006376733.1|Enterococcus_faecium_DO|-|663..2186|-|HMPREF0351_12127|bifunctional 
family U35 
bacteriophage prohead peptidase/major capsid protein
Length=507

 Score =  399 bits (1502),  Expect = 2e-112, Method: Compositional matrix adjust.
 Identities = 265/511 (52%), Positives = 363/511 (72%), Gaps = 37/511 (7%)

Query  3    DRRLTIEAELRADEPEAETPEDNTDTQENSDTTNNKDDSKDGKTVSGYAMVWNTPSKPLK  62
            ++RLT EAEL AD P  E  +++              ++ DGKT+SGYA+    PSK L 
Sbjct  8    EKRLTEEAELTADSPKVEKENEK--------------QPTDGKTISGYALKFGQPSKDL-  52

Query  63   DGDTSFTEIITPEALSGTDLSNVILLSNHDYSEPLASVKAGTLKLETDDKGLHFEATLPN  122
                +F E+ITPEAL   DLSNV+LL  HDYS PLASVKAGTLKL+ DD GLHFEA L +
Sbjct  53   ---GGFVEVITPEALKEVDLSNVFLLYGHDYSKPLASVKAGTLKLNVDDTGLHFEAELTD  109

Query  123  TTAANDTYENIKAGNIDSASFRFSNVDDSWEKDDAGNITRTINQIRDLFEISTVTVPAYD  182
            TT +ND YENI  G +DS SF F    DS +K + G I R+I++I+ L EIS VTVPAYD
Sbjct  110  TTYSNDVYENISKGVVDSMSFGFVLGLDSFDKKEDGTIERSIDKIKALNEISVVTVPAYD  169

Query  183  DTNVAVDTRSYEKFM---------------NKENEESKHMentiienteeatetRSFEDY  227
             +NV V+ RSYE FM               +K + ES++M        +E TE R++E+Y
Sbjct  170  SSNVQVNKRSYESFMSNNQAKQTNNSLESTSKAQKESNNM--EKTLIDNEKTELRGYEEY  227

Query  228  IRSNGETRDGLTTDGNKPIIPSEVITPIFEYKQNKANLGQYVTVKTVSTGAGIYPISVNN  287
            IRS+GE RDG+TT    +++P EVI  +F+ K+++ NL+QY TVKTVS G G YP++ N+
Sbjct  228  IRSQGEVRDGVTTVNAAAVVPEEVIGEVFDLKRSNYNLAQYATVKTVSNGQGKYPVATNQ  287

Query  288  NATLATKAELAQIADVDSGI-TGVEFKVVTRAGKIFLSQEIIDDSAIPIVSEVQAQLQKL  346
            +A LATKAELA+I+D+D+ + T+V++KV TRAGKI LS+E+++DSA+ IV EV+ QL KL
Sbjct  288  QAVLATKAELAEIGDIDAEMFTSVDYKVETRAGKIALSNEVVEDSAVNIVQEVKDQLAKL  347

Query  347  VNNTDNTNIvallkkatkkavtSLDDVKTTFNVDLDPALNKSVVTNQGGFNYLDQLKDNE  406
            V+NTDN +I+ LLK  TKK+ ++LDD+K  +NV LDPALNK V+ NQ+G+  LD LKD++
Sbjct  348  VENTDNKHIMDLLKTFTKKTAATLDDLKQLYNVALDPALNKMVILNQSGYYHLDTLKDSD  407

Query  407  GRYMLQADPTSPTGKSLFGAPIIVVPSVLLPDETAGSSFPMFVGDLEQYIALFKRNQVSV  466
            GRY+LQ+D T+P+GKSLFG P+++++  L+++  AG +FPM++GD+ Q I + +RNQV+ 
Sbjct  408  GRYILQPDVTAPSGKSLFGMPVVLIADTLFANPKAG-TFPMIMGDIAQSIFVARRNQVTT  466

Query  467  NWQQFDSYSSGLAVVVRNDYEVIDANAMVYL  497
            +W++FD YS GLAV+VRNDY  ID NA VY+
Sbjct  467  QWEKFDYYSQGLAVIVRNDYKKIDQNASVYI  497