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Homologs of PMI2549 gene of NC_010554_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) PMI2549
( YP_002152268.1 )

phage integrase

NC_010554
(Proteus mirabilis HI4320)

4e-170

100

2) NT01EI_0370
( YP_002931847.1 )

site-specific recombinase, phage integrase family protein

NC_012779
(Edwardsiella ictaluri 93-146)

5e-64

3) XBJ1_1557
( YP_003467464.1 )

tyrosine recombinase-like

NC_013892
(Xenorhabdus bovienii SS-2004)

6e-64

4) SerAS9_0340
( YP_004503757.1 )

integrase

NC_015567
(Serratia plymuthica AS9)

2e-63

5) SerAS12_0340
( YP_004498805.1 )

integrase family protein

NC_015566
(Serratia sp. AS12)

2e-63

6) SerAS13_0340
( YP_006023220.1 )

integrase family protein

NC_017573
(Serratia sp. AS13)

2e-63

7) M621_21450
( YP_008161048.1 )

tyrosine recombinase XerD

NC_021659
(Serratia plymuthica S13)

3e-63

8) XNC1_3506
( YP_003713655.1 )

phage integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

3e-63

9) XNC1_3129
( YP_003713301.1 )

phage integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

4e-63

10) Spro_4048
( YP_001480271.1 )

integrase family protein

NC_009832
(Serratia proteamaculans 568)

5e-63

11) Spro_0401
( YP_001476637.1 )

integrase family protein

NC_009832
(Serratia proteamaculans 568)

1e-62

12) XBJ1_1459
( YP_003467376.1 )

phage integrase

NC_013892
(Xenorhabdus bovienii SS-2004)

2e-62

13) YPZ3_0342
( YP_003566514.1 )

integrase

NC_014029
(Yersinia pestis Z176003)

2e-62

14) XNC1_3598
( YP_003713735.1 )

phage integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

2e-62

15) Spro_4117
( YP_001480340.1 )

integrase family protein

NC_009832
(Serratia proteamaculans 568)

5e-62

16) XNC1_3639
( YP_003713771.1 )

phage integrase

NC_014228
(Xenorhabdus nematophila ATCC 19061)

4e-61

17) STY4666
( NP_458745.1 )

probable phage integrase

NC_003198
(Salmonella enterica CT18)

1e-58

18) STBHUCCB_46130
( YP_005220029.1 )

Phage integrase

NC_016832
(Salmonella enterica P-stx-12)

1e-58

19) t4357
( NP_807950.1 )

phage integrase

NC_004631
(Salmonella enterica Ty2)

1e-58

20) TY21A_22190
( YP_007928598.1 )

phage integrase

NC_021176
(Salmonella enterica Ty21a)

1e-58

21) plu1029
( NP_928358.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

2e-58

22) plu1166
( NP_928478.1 )

hypothetical protein

NC_005126
(Photorhabdus luminescens TTO1)

6e-58

23) ECA0614
( YP_048731.1 )

phage integrase

NC_004547
(Pectobacterium atrosepticum SCRI1043)

2e-55

24) CFSAN002050_21945
( YP_008262256.1 )

tyrosine recombinase XerD

NC_021818
(Salmonella enterica CFSAN002050)

3e-55

25) YpsIP31758_3686
( YP_001402640.1 )

phage integrase

NC_009708
(Yersinia pseudotuberculosis IP 31758)

4e-55

26) Y11_23521
( YP_006005851.1 )

putative phage integrase

NC_017564
(Yersinia enterocolitica Y11)

7e-55

27) YE105_C3207
( YP_004299404.1 )

Phage integrase

NC_015224
(Yersinia enterocolitica 105.5R(r))

8e-55

28) YE3450
( YP_001007614.1 )

phage integrase

NC_008800
(Yersinia enterocolitica 8081)

2e-54

29) Ser39006_1551
( YP_008521933.1 )

integrase family protein

NC_022268
(Serratia sp. ATCC 39006)

3e-54

30) ECL_00532
( YP_003611047.1 )

putative integrase

NC_014121
(Enterobacter cloacae ATCC 13047)

9e-52

31) KPHS_44700
( YP_005228770.1 )

Phage integrase

NC_016845
(Klebsiella pneumoniae HS11286)

2e-49

32) N559_0834
( YP_008423904.1 )

site-specific recombinase, phage integrase family

NC_022082
(Klebsiella pneumoniae JM45)

4e-49

33) LF82_703
( YP_002559041.1 )

phage integrase

NC_011993
(Escherichia coli LF82)

2e-47

34) NRG857_21025
( YP_006122547.1 )

putative phage integrase

NC_017634
(Escherichia coli NRG 857C)

2e-47

• Sequence Alignments

1) PMI2549 in NC_010554


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  590 bits (2229),  Expect = 4e-170, Method: Compositional matrix adjust.
 Identities = 356/356 (100%), Positives = 356/356 (100%), Gaps = 0/356 (0%)

Query  1    MKDNHSSDEHQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPD  60
            MKDNHSSDEHQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPD
Sbjct  1    MKDNHSSDEHQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPD  60

Query  61   EVTHEHVLRWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPG  120
            EVTHEHVLRWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPG
Sbjct  61   EVTHEHVLRWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPG  120

Query  121  EKQKKVYTQSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIR  180
            EKQKKVYTQSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIR
Sbjct  121  EKQKKVYTQSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIR  180

Query  181  FNQLINLHIGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKND  240
            FNQLINLHIGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKND
Sbjct  181  FNQLINLHIGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKND  240

Query  241  ILFDVHRLYHKRLSRSETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNM  300
            ILFDVHRLYHKRLSRSETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNM
Sbjct  241  ILFDVHRLYHKRLSRSETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNM  300

Query  301  QLTKQMLGHRSLSSTMEYIALDAYSTVRILENELGEFLTMGLGGELTRLASKRQRM  356
            QLTKQMLGHRSLSSTMEYIALDAYSTVRILENELGEFLTMGLGGELTRLASKRQRM
Sbjct  301  QLTKQMLGHRSLSSTMEYIALDAYSTVRILENELGEFLTMGLGGELTRLASKRQRM  356

2) NT01EI_0370 in NC_012779


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  238 bits (886),  Expect = 5e-64, Method: Compositional matrix adjust.
 Identities = 141/331 (43%), Positives = 228/331 (69%), Gaps = 10/331 (3%)

Query  6    TWDELLEEYFFAHRLRPATEWSYSKVVRGFRRYS--CDT---LPAQITHRQVLEWRRYLL  60
             W+++L +YF+   LRP TE +Y K+VR F RY   C+    LP ++TH +VL WRR  L
Sbjct  16   VWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNEL  75

Query  61   QDKQQSAQTWNNKIAHLRALYNYGMEYEILPPGKNPFNKSNVQRDTRKKKTLTRSQLIRV  120
            + ++   +TWN K  H+++LYNY +   I++   NPF+ ++++ + ++KK  T+SQL  +
Sbjct  76   NIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTI  135

Query  121  YLVMQQFEEAER--AGHGIRGGRNALWPAWYWLTVLDSFRYTGMRLNQLLHIRLGDINLS  178
            Y +++QF++ E   + +  +    A+ P+++W++VL+++R T++R+NQL+++++GD+++ 
Sbjct  136  YRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  179  EGYLDLCLEGSKTHREWRVPIVSALKPRLHHLTEKSTELGAGNEDYLFDVNRIHLKRHMA  238
            E  + L  E+SK HRE ++++V +L+  L  L E     GA+++D LFDV+R+  KR ++
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKR-LS  254

Query  239  WDAAKVYQKIRSFFRRLSKECGFAVSPHRFRHTLATELMKSPERNLQLVKDLLGHRSVST  298
            +  + + Q IRSFFRRLSKECGF VSPHRFRHTLAT LMK PERN+QL K++LGHRS+S+
Sbjct  255  RSETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSS  314

Query  299  TMEYVELKMDIVGKTLEAELS--LHTDVTGE  327
            TMEY+ L      + LE EL+  L  ++ GE
Sbjct  315  TMEYIALDAYSTVRILENELGEFLTMGLGGE  345

3) XBJ1_1557 in NC_013892


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  237 bits (885),  Expect = 6e-64, Method: Compositional matrix adjust.
 Identities = 143/338 (43%), Positives = 233/338 (69%), Gaps = 12/338 (3%)

Query  3    NNEETMGWDALLDEYFFSRMLRPATEWSYRKVVRVFIRYLGETES----PESVTHRDVLR  58
            +++    W+ +L +YF++++LRP TE +YRK+VR+F+RY G  E+    P+ VTH +VLR
Sbjct  10   HQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLR  69

Query  59   WRRHLLTEKNQSRYTWNNKVAHLRAIFNFGMERKLLSHPKNPFNDASVkkekkqkktlsk  118
            WRR+ L  ++    TWN K  H+++++N+ + + ++S   NPF+++ +    KQKK  ++
Sbjct  70   WRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQ  129

Query  119  AQITGIYLRMQQYEEEERLQTSPRG--GRCALYPTGYWLTVLDTFRLTGMRLNQLLHLRL  176
            +Q+  IY  ++Q++++E +  + ++    CA+YPT +W++VL+T+RLT++R+NQL++L++
Sbjct  130  SQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHI  189

Query  177  RDINLDNSYIELRVEGSKNHSEWRVPMIPQLKPRLVQLVEQAKACGAKENDPLFDLTRLR  236
             D+++++  I LR E+SKNH E +++ +  L+  L  LVE+ +  GA  ND LFD+ RL 
Sbjct  190  GDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRL-  248

Query  237  FRYHGRHVSYQYHHDREKQHLRSFFNRLSKECGFAVSPHRFRHTLATELMKAPDRNLQLV  296
              YH R       +    Q +RSFF RLSKECGF VSPHRFRHTLAT LMK P+RN+QL 
Sbjct  249  --YHKRLSR---SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLT  303

Query  297  RCLLGHRSLATTMEYIDIDMEIAGKTLANELAFYLDIA  334
            + +LGHRSL++TMEYI +D   + + L NEL+ +L ++
Sbjct  304  KQMLGHRSLSSTMEYIALDAYSTVRILENELGEFLTMG  341

4) SerAS12_0340 in NC_015566


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 140/332 (43%), Positives = 233/332 (71%), Gaps = 10/332 (3%)

Query  2    HKSRVMDWDTLLEEYFFSKVLRPETERSYRRVVAVFRRFIGYG----TLPDAVTNRELIL  57
            H+ +V  W+ +L +YF++KVLRP+TE++YR++V +F R+ G       LPD VT+ +++ 
Sbjct  10   HQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLR  69

Query  58   WRRDMLG-RGLTTSTWNNKARHLRAIYNQGMKKKWLNVEENPLNETQVPPGNKRKKTLNR  116
            WRR+ L  + +   TWN K+RH++++YN  +KK  +++ ENP++ETQ+ PG+K+KK   +
Sbjct  70   WRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQ  129

Query  117  DQLVKVNLVLEQFEEREKL---RVGKCRPCALFPVWYWRTVIDVLRSTGMRQNQLLHIRL  173
             QL  +  +LEQF+++E++     +  ++CA++P ++W +V++ LR T++R NQL+++++
Sbjct  130  SQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHI  189

Query  174  MDVDLEANSMLLCKEGSKTHREWLVPIVSFIRERMRILVNRAIAQGAEPADYLFDVAR-F  232
             D+D+E  ++ L  E+SK HRE  +++V  +R  +  LV+    +GA+  D LFDV R +
Sbjct  190  GDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLY  249

Query  233  LNPLGEVDSEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLG  292
             + L+  ++ P  Q +RSFF RL+KECGF VSPHRFRHTLAT +MK P+RN+ + K +LG
Sbjct  250  HKRLSRSET-PLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLG  308

Query  293  HRSVSTTMEYVELDLKVTGQALENELSLYMDV  324
            HRS+S+TMEY+ LD   T + LENEL+ ++ +
Sbjct  309  HRSLSSTMEYIALDAYSTVRILENELGEFLTM  340

5) SerAS13_0340 in NC_017573


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 140/332 (43%), Positives = 233/332 (71%), Gaps = 10/332 (3%)

Query  2    HKSRVMDWDTLLEEYFFSKVLRPETERSYRRVVAVFRRFIGYG----TLPDAVTNRELIL  57
            H+ +V  W+ +L +YF++KVLRP+TE++YR++V +F R+ G       LPD VT+ +++ 
Sbjct  10   HQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLR  69

Query  58   WRRDMLG-RGLTTSTWNNKARHLRAIYNQGMKKKWLNVEENPLNETQVPPGNKRKKTLNR  116
            WRR+ L  + +   TWN K+RH++++YN  +KK  +++ ENP++ETQ+ PG+K+KK   +
Sbjct  70   WRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQ  129

Query  117  DQLVKVNLVLEQFEEREKL---RVGKCRPCALFPVWYWRTVIDVLRSTGMRQNQLLHIRL  173
             QL  +  +LEQF+++E++     +  ++CA++P ++W +V++ LR T++R NQL+++++
Sbjct  130  SQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHI  189

Query  174  MDVDLEANSMLLCKEGSKTHREWLVPIVSFIRERMRILVNRAIAQGAEPADYLFDVAR-F  232
             D+D+E  ++ L  E+SK HRE  +++V  +R  +  LV+    +GA+  D LFDV R +
Sbjct  190  GDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLY  249

Query  233  LNPLGEVDSEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLG  292
             + L+  ++ P  Q +RSFF RL+KECGF VSPHRFRHTLAT +MK P+RN+ + K +LG
Sbjct  250  HKRLSRSET-PLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLG  308

Query  293  HRSVSTTMEYVELDLKVTGQALENELSLYMDV  324
            HRS+S+TMEY+ LD   T + LENEL+ ++ +
Sbjct  309  HRSLSSTMEYIALDAYSTVRILENELGEFLTM  340

6) SerAS9_0340 in NC_015567


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  236 bits (879),  Expect = 2e-63, Method: Compositional matrix adjust.
 Identities = 140/332 (43%), Positives = 233/332 (71%), Gaps = 10/332 (3%)

Query  2    HKSRVMDWDTLLEEYFFSKVLRPETERSYRRVVAVFRRFIGYG----TLPDAVTNRELIL  57
            H+ +V  W+ +L +YF++KVLRP+TE++YR++V +F R+ G       LPD VT+ +++ 
Sbjct  10   HQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLR  69

Query  58   WRRDMLG-RGLTTSTWNNKARHLRAIYNQGMKKKWLNVEENPLNETQVPPGNKRKKTLNR  116
            WRR+ L  + +   TWN K+RH++++YN  +KK  +++ ENP++ETQ+ PG+K+KK   +
Sbjct  70   WRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQ  129

Query  117  DQLVKVNLVLEQFEEREKL---RVGKCRPCALFPVWYWRTVIDVLRSTGMRQNQLLHIRL  173
             QL  +  +LEQF+++E++     +  ++CA++P ++W +V++ LR T++R NQL+++++
Sbjct  130  SQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHI  189

Query  174  MDVDLEANSMLLCKEGSKTHREWLVPIVSFIRERMRILVNRAIAQGAEPADYLFDVAR-F  232
             D+D+E  ++ L  E+SK HRE  +++V  +R  +  LV+    +GA+  D LFDV R +
Sbjct  190  GDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLY  249

Query  233  LNPLGEVDSEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLG  292
             + L+  ++ P  Q +RSFF RL+KECGF VSPHRFRHTLAT +MK P+RN+ + K +LG
Sbjct  250  HKRLSRSET-PLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLG  308

Query  293  HRSVSTTMEYVELDLKVTGQALENELSLYMDV  324
            HRS+S+TMEY+ LD   T + LENEL+ ++ +
Sbjct  309  HRSLSSTMEYIALDAYSTVRILENELGEFLTM  340

7) M621_21450 in NC_021659


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  235 bits (876),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 140/332 (43%), Positives = 234/332 (71%), Gaps = 10/332 (3%)

Query  14   HKSRVMDWDTLLEEYFFSKVLRPETERSYRRVVAVFRKFIG-YDT---LPDEVTNRELIL  69
            H+ +V  W+ +L +YF++KVLRP+TE++YR++V +F ++ G  +    LPDEVT+ +++ 
Sbjct  10   HQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLR  69

Query  70   WRRDMLGRGLTRS-TWNNKARHLRAIYNQGMKKKWLNVEENPLNETQVPPGNKRKKTLNR  128
            WRR+ L     R  TWN K+RH++++YN  +KK  +++ ENP++ETQ+ PG+K+KK   +
Sbjct  70   WRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQ  129

Query  129  DQLVKVNLVLEQFEEREKL---RVGKCRPCALFPVWYWRTVIDVLRSTGMRQNQLLHIRL  185
             QL  +  +LEQF+++E++     +  ++CA++P ++W +V++ LR T++R NQL+++++
Sbjct  130  SQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHI  189

Query  186  MDVDLEANSMLLCKEGSKTHREWLVPIVSFIRERMRILVDRAIAQGAEPAGYLFDVAR-F  244
             D+D+E  ++ L  E+SK HRE  +++V  +R  +  LV+    +GA+  + LFDV R +
Sbjct  190  GDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLY  249

Query  245  LNPLGDVDSEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLG  304
             + L+  ++ P  Q +RSFF RL+KECGF VSPHRFRHTLAT +MK P+RN+ + K +LG
Sbjct  250  HKRLSRSET-PLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLG  308

Query  305  HRSVSTTMEYVELDLKVTGQALENELSLYMDV  336
            HRS+S+TMEY+ LD   T + LENEL+ ++ +
Sbjct  309  HRSLSSTMEYIALDAYSTVRILENELGEFLTM  340

8) XNC1_3506 in NC_014228


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  235 bits (876),  Expect = 3e-63, Method: Compositional matrix adjust.
 Identities = 143/340 (43%), Positives = 237/340 (70%), Gaps = 13/340 (3%)

Query  3    NNEEKMG-WDALLDEYFFSRMLRPATEWSYRKVVRVFIRYLGETGS----PESVTHRDVL  57
            ++++K++ W+ +L +YF++++LRP TE +YRK+VR+F+RY G   +    P+ VTH +VL
Sbjct  9    EHQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVL  68

Query  58   CWRRHLLMEKNQSGYTWNNKVAHLRAIFNFGMERKLLSHPKNPFNDAAVkkekkqkktls  117
             WRR+ L  ++    TWN K  H+++++N+ + + ++S   NPF+++ +    KQKK  +
Sbjct  69   RWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYT  128

Query  118  kAQITGIYLRMQQYEEEERLQTAPRG--GRCALYPTGYWLTVLDTFRLTGMRLNQLLHLR  175
            ++Q+  IY  ++Q++++E +  + ++    CA+YPT +W++VL+T+RLT++R+NQL++L+
Sbjct  129  QSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLH  188

Query  176  LRDINLDNSYIELRVEGSKNHSEWRVPMIPQLKPRLAQLVEQAKACGAKENDPLFDLTRL  235
            + D+++++  I LR E+SKNH E +++ +  L+  LA LVE+ +  GA  ND LFD+ RL
Sbjct  189  IGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRL  248

Query  236  RFRYHGRHVSHQYHHDREKQHLRSFFNRLSKECGFAVSPHRFRHTLATELMKAPDRNLQL  295
               YH R    +       Q +RSFF RLSKECGF VSPHRFRHTLAT LMK P+RN+QL
Sbjct  249  ---YHKRLSRSE---TPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQL  302

Query  296  VRCLLGHRSLATTMEYIDIDMEIAGKTLANELAFYLDLAV  335
             + +LGHRSL++TMEYI +D   + + L NEL+ +L +++
Sbjct  303  TKQMLGHRSLSSTMEYIALDAYSTVRILENELGEFLTMGL  342

9) XNC1_3129 in NC_014228


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  235 bits (875),  Expect = 4e-63, Method: Compositional matrix adjust.
 Identities = 141/340 (42%), Positives = 239/340 (71%), Gaps = 13/340 (3%)

Query  3    NNEEKMG-WDALLDEYFFSRMLRPATEWSYRKVVRVFIRYLG----ETGLPESVTHRDVL  57
            ++++K++ W+ +L +YF++++LRP TE +YRK+VR+F+RY G       LP+ VTH +VL
Sbjct  9    EHQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVL  68

Query  58   CWRRHLLMEKNQSGYTWNNKVAHLRAIFNFGMERKLLSHPKNPFNDAAVkkekkqkktls  117
             WRR+ L  ++    TWN K  H+++++N+ + + ++S   NPF+++ +    KQKK  +
Sbjct  69   RWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYT  128

Query  118  kAQITGIYLRMQQYEEEERLQTAPRG--GRCALYPTGYWLTVLDTFRLTGMRLNQLLHLR  175
            ++Q+  IY  ++Q++++E +  + ++    CA+YPT +W++VL+T+RLT++R+NQL++L+
Sbjct  129  QSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLH  188

Query  176  LRDINLDNSYIELRVEGSKNHSEWRVPMIPQLKPRLAQLVEQAKACGAKEDDPLFDLTRL  235
            + D+++++  I LR E+SKNH E +++ +  L+  LA LVE+ +  GA  +D LFD+ RL
Sbjct  189  IGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRL  248

Query  236  RFRHHGRHVSHQYSHDREKQHLRSFFNRLSKECGFAVSPHRFRHTLATELMKAPDRNLQL  295
              ++ +R      S+    Q +RSFF RLSKECGF VSPHRFRHTLAT LMK P+RN+QL
Sbjct  249  YHKRLSR------SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQL  302

Query  296  VRCLLGHRSVATTMEYIDIDMEIAGKTLANELAFYLDLAV  335
             + +LGHRS+++TMEYI +D   + + L NEL+ +L +++
Sbjct  303  TKQMLGHRSLSSTMEYIALDAYSTVRILENELGEFLTMGL  342

10) Spro_4048 in NC_009832


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  234 bits (874),  Expect = 5e-63, Method: Compositional matrix adjust.
 Identities = 137/329 (42%), Positives = 235/329 (72%), Gaps = 9/329 (2%)

Query  3    NEEKMHDEWELLLEEYFFTKQLRSATEWSYRKVALTFTRFIG----GIITPAMVTQRDVL  58
            ++++  D WE +L +YF+ K LR+ TE +YRK+   F R+ G    ++  P  VT+ +VL
Sbjct  9    EHQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVL  68

Query  59   VWRRHLLKEKSLSVHTWNNKVAHLRAIFNLGIKKGLVQHTENPFNGTVVRSDTKKKRILT  118
             WRR+ L+ + +  +TWN K  H+++++N  IKKG+V   ENPF+ T + ++ K+K++ T
Sbjct  69   RWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYT  128

Query  119  KTQLTRLYLVMQQYEQREKERKPVKG--GKCALYPTWFWMTVLDTFRYTGMRNNQMIHIR  176
            ++QL  +Y +++Q++Q+E+   P ++    CA+YPT+FW +VL+T+R T++R NQ+I+++
Sbjct  129  QSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLH  188

Query  177  LRDVNLEQGWIELRLEGSKTHREWKVPLVRQLRERIKLLIMRATERGAGQHDLLFDVKRF  236
            + D+++E+  I LR E+SK HRE ++++V+ LR  +  L+     +GA+++D+LFDV R+
Sbjct  189  IGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRL  248

Query  237  TNPRHTHYIYDEKNVLQSFRSFYRRLSRDSGFDISSHRFRHTLATELMKSPDRNLKLVKD  296
             + R ++    E  + Q++RSF+RRLS++ GF++S+HRFRHTLAT LMK P+RN++L K+
Sbjct  249  YHKRLSR---SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQ  305

Query  297  LLGHRNVSTTMEYIELDMEVAGKALEQEL  325
            +LGHR++S+TMEYI LD   + + LE+EL
Sbjct  306  MLGHRSLSSTMEYIALDAYSTVRILENEL  334

11) Spro_0401 in NC_009832


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  233 bits (870),  Expect = 1e-62, Method: Compositional matrix adjust.
 Identities = 140/332 (43%), Positives = 234/332 (71%), Gaps = 10/332 (3%)

Query  2    HKSRVMDWDTLLEEYFFSKALRPETEKSYRRVVAVFRKFIG-YDR---LPDEVTNRDLIL  57
            H+ +V  W+ +L +YF++K LRP+TEK+YR++V +F ++ G  +    LPDEVT+ +++ 
Sbjct  10   HQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLR  69

Query  58   WRRDMLG-RGLTTSTWNNKARHLRAIYNQGIKKKWLNVVENPLNETQVPSGNKRKKTLNR  116
            WRR+ L  + +   TWN K+RH++++YN  IKK  +++ ENP++ETQ+ +G+K+KK   +
Sbjct  70   WRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQ  129

Query  117  DQLVKVNLVLEQFEEREKL---RVGKCRPCALFPVWYWRTVIDVLRSTGMRQNQLLHIRL  173
             QL  +  +LEQF+++E++     +  ++CA++P ++W +V++ LR T++R NQL+++++
Sbjct  130  SQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHI  189

Query  174  MDVDLEANSMLLCKEGSKTHREWLVPIVSFIRERMRILVDRAIAQGAEPADYLFDVAR-F  232
             D+D+E  ++ L  E+SK HRE  +++V  +R  +  LV+    +GA+  D LFDV R +
Sbjct  190  GDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLY  249

Query  233  LNPLGEVDSEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLG  292
             + L+  ++ P  Q +RSFF RL+KECGF VSPHRFRHTLAT +MK P+RN+ + K +LG
Sbjct  250  HKRLSRSET-PLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLG  308

Query  293  HRSVSTTMEYVELDLKITGQALENELSLYMDV  324
            HRS+S+TMEY+ LD   T + LENEL+ ++ +
Sbjct  309  HRSLSSTMEYIALDAYSTVRILENELGEFLTM  340

12) XBJ1_1459 in NC_013892


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  233 bits (867),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 142/328 (44%), Positives = 227/328 (70%), Gaps = 14/328 (4%)

Query  10   WEALLDEYFFSHILRPDTEWSYRKVVRGFIRFMGEAAS----PAQVTHRDVLRWRRHLLL  65
            WE +L +YF++ +LRPDTE +YRK+VR F+R+ G   +    P +VTH +VLRWRR+ L 
Sbjct  17   WEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELN  76

Query  66   EKKQSSHTWNNKVAHLRAIFNFGMEQKLLPHTENPFNNAVVkkekkkkkILSESQINRIN  125
             +K   +TWN K  H+++++N+ + + +++  ENPF+++ +    K+KK+ ++SQ+  I 
Sbjct  77   IQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIY  136

Query  126  LLMGKFAEDERTQVAPKGGR---CALYPTWYWSTVLATLRFTGMRQNQLLHLRLRDINLE  182
             ++ +F ++E   ++P  ++   CA+YPT++W +VL TLR+T++R NQL++L++ D+++E
Sbjct  137  RILEQFQQQE-NMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  183  GNSIELGLAGSKNHCEWEVPIVHPLKPRLAHLIERATAAGAEAGDPIFDLSRLSVPHPSR  242
              +I L   +SKNH E ++++V+PL+  LA L+E     GA+  D +FD+ RL      R
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRL---YHKR  252

Query  243  LSRYKYDINREKQQLRSFFRRLSRECDFAVSPHRFRHTVASTLMKAPDRNLPLVKRLLGH  302
            LSR         Q +RSFFRRLS+EC+F VSPHRFRHT+A+TLMK P+RN+ L K++LGH
Sbjct  253  LSR---SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGH  309

Query  303  RNVATTMEYIDLDMEVTGKTLERELGLY  330
            R++++TMEYI LD   T + LE ELG +
Sbjct  310  RSLSSTMEYIALDAYSTVRILENELGEF  337

13) YPZ3_0342 in NC_014029


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  232 bits (865),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 140/332 (43%), Positives = 230/332 (70%), Gaps = 8/332 (2%)

Query  2    QKTRVMDWETLLEEYFFSKALRPETEMSYRRVVAVFRKFIG---NDM-LPDEVTNRELIL  57
            ++ +V  WE +L +YF++K LRP+TE +YR++V +F ++ G   N + LPDEVT+ +++ 
Sbjct  10   HQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLR  69

Query  58   WRRDMLG-RGLTTSTWNNKVRHLRAIYNQGIKKKWLTLKENPLNETQVPPGSKRKKILSR  116
            WRR+ L  + +   TWN K RH++++YN  IKK  ++LKENP++ETQ+ PG K+KK+ ++
Sbjct  70   WRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQ  129

Query  117  DQLVRVNLVLGQFEERENHW---LGQCRPCALYPVWYWRTVFDVLRSTGMRQNQLLHVRL  173
             QL  +  +L QF+++EN      ++ ++CA+YP ++W +V++ LR T++R NQL+++++
Sbjct  130  SQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHI  189

Query  174  KDVDLKANSILLCKKGSKTHREWLVPIVNFLSDRMRILVDRAIAQGAEPEDYLFDVKRFL  233
             D+D+   +I L   +SK HRE  +++V+ L   +  LV+    +GA+ +D LFDV R+ 
Sbjct  190  GDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLY  249

Query  234  NPFGEVGPEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLGH  293
            +     +  P  Q +RSFF RL+KECGF VSPHRFRHTLAT +MK P+RN+ + K +LGH
Sbjct  250  HKRLSRSETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGH  309

Query  294  RSVSTTLEYVELDLKITGQALEDELSLYMDLT  325
            RS+S+T+EY+ LD   T + LE+EL+ ++ + 
Sbjct  310  RSLSSTMEYIALDAYSTVRILENELGEFLTMG  341

14) XNC1_3598 in NC_014228


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  232 bits (866),  Expect = 2e-62, Method: Compositional matrix adjust.
 Identities = 141/341 (42%), Positives = 237/341 (70%), Gaps = 13/341 (3%)

Query  2    SNNEEKMG-WDALLDEYFFSRMLRPATEWSYRKVVRVFIRYLG----ETGLPEGVTHRDV  56
             ++++K++ W+ +L +YF++++LRP TE +YRK+VR+F+RY G       LP+ VTH +V
Sbjct  8    DEHQQKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHV  67

Query  57   LCWRRHLLMEKNQSGYTWNNKVAHLRAIFNFGMERKLLSHPKNPFNDAAVkkekkqkkil  116
            L WRR+ L  ++    TWN K  H+++++N+ + + ++S   NPF+++ +    KQKK+ 
Sbjct  68   LRWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVY  127

Query  117  skAQITGIYLRMQQYEEEERLQTAPRG--GRCALYPTGYWLTVLDTFRLTGMRLNQLLHL  174
            +++Q+  IY  ++Q++++E +  + ++    CA+YPT +W++VL+T+RLT++R+NQL++L
Sbjct  128  TQSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINL  187

Query  175  RLRDINLDNSYIELRVEGSKNHSEWRVPMIPQLKPRLAQLVEQAKACGAKEDDPLFDLTR  234
            ++ D+++++  I LR E+SKNH E +++ +  L+  LA LVE+ +  GA  +D LFD+ R
Sbjct  188  HIGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHR  247

Query  235  LRFCHHGRHVSHQYHHDREKQHLRSFFNRLSKECGFAVSPHRFRHTLATELMKAPDRNLQ  294
            L    H R    +       Q +RSFF RLSKECGF VSPHRFRHTLAT LMK P+RN+Q
Sbjct  248  L---YHKRLSRSE---TPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQ  301

Query  295  LVRCLLGHRSVATTMEYIDIDMEIAGKTLANELAFYLDLAV  335
            L + +LGHRS+++TMEYI +D   + + L NEL+ +L +++
Sbjct  302  LTKQMLGHRSLSSTMEYIALDAYSTVRILENELGEFLTMGL  342

15) Spro_4117 in NC_009832


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  231 bits (861),  Expect = 5e-62, Method: Compositional matrix adjust.
 Identities = 139/325 (43%), Positives = 229/325 (71%), Gaps = 10/325 (3%)

Query  9    WDTLLEEYFFSKALRPETERSYRRVVAVFRKFIG-YET---LPDEVTNRELILWRRDMLG  64
            W+ +L +YF++K LRP+TE++YR++V +F ++ G  E    LPDEVT+ +++ WRR+ L 
Sbjct  17   WEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELN  76

Query  65   -RGLTTSTWNNKARHLRAIYNQGIKKKWLNVVENPLNETQVPPGSKRKKILNRDQLVKVN  123
             + +   TWN K+RH++++YN  IKK  +++ ENP++ETQ+ PG K+KK+  + QL  + 
Sbjct  77   IQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIY  136

Query  124  LALEQFEEREKL---RVGKCRPCALFPVWYWRTVIDVLRSTGMRQNQLLHIRLMDVDLEA  180
              LEQF+++E++     +  ++CA++P ++W +V++ LR T++R NQL+++++ D+D+E 
Sbjct  137  RILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFEE  196

Query  181  NSMLLCKEGSKTHREWLVPIVSFIRERMRILVDRAIAQGAEPADYLFDVAR-FLNPLGEV  239
             ++ L  E+SK HRE  +++V  +R  +  LV+    +GA+  D LFDV R + + L+  
Sbjct  197  CTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSRS  256

Query  240  DSEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLGHRSVSTT  299
            ++ P  Q +RSFF RL+KECGF VSPHRFRHTLAT +MK P+RN+ + K +LGHRS+S+T
Sbjct  257  ET-PLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  300  MEYVELDLKVTGQALENELSLYMDV  324
            MEY+ LD   T + LENEL+ ++ +
Sbjct  316  MEYIALDAYSTVRILENELGEFLTM  340

16) XNC1_3639 in NC_014228


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  228 bits (849),  Expect = 4e-61, Method: Compositional matrix adjust.
 Identities = 146/328 (45%), Positives = 225/328 (69%), Gaps = 14/328 (4%)

Query  10   WEALLEEYFFSHILRPDTEWSYCKVTRGFIRFMGEAAS----PAQITHRDVLWWRRHLLV  65
            WE +L +YF++ +LRPDTE +Y K+ R F+R+ G   +    P ++TH +VL+WRR+ L 
Sbjct  17   WEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELN  76

Query  66   EKKQSSHTWNNKVAHLRAIFNFGMERKLLSHTENPFNNAVVkkekkkkkILSQSQITLIN  125
             +K   +TWN K  H+++++N+ + + ++S  ENPF+++ +    K+KK+ +QSQ+  I 
Sbjct  77   IQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIY  136

Query  126  LLMGKFAEEERTEVTPRGGR---CALYPTWYWSTVLATLRFTGMRQNQLLHLRLRDINLE  182
             ++ +F ++E   + P  ++   CA+YPT++W +VL TLR+T++R NQL++L++ D+++E
Sbjct  137  RILEQFQQQENM-LPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  183  SNYIELGLEGSKNHSEWEIPIIPPLKPRLAKLVERAIAAGAKANDPIFDLSRLSVPHPSR  242
               I L  E+SKNH E +I+++ PL+  LA LVE     GA  ND +FD+ RL      R
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRL---YHKR  252

Query  243  LSRYKYDINREKQQLRSFFRRLSKECDFAVSPHRFRHTLATTLMKSPDRNLPLVKRLLGH  302
            LSR    ++   Q +RSFFRRLSKEC+F VSPHRFRHTLATTLMK P+RN+ L K++LGH
Sbjct  253  LSRSETPLS---QTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGH  309

Query  303  RNVATTMEYIDLDMEVTGKALERELGVY  330
            R++++TMEYI LD   T + LE ELG +
Sbjct  310  RSLSSTMEYIALDAYSTVRILENELGEF  337

17) STY4666 in NC_003198


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  220 bits (818),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 128/319 (41%), Positives = 218/319 (69%), Gaps = 6/319 (1%)

Query  6    TWQQLIDEYFFAKPLRSASEWSYTKVFKSFVHYMG----PLSCPNDVTYHKVLAWRRFLL  61
             W+Q++ +YF+ K LR+ +E +Y K+ + F++Y G    +L+ P++VT + VL WRR  L
Sbjct  16   VWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNEL  75

Query  62   KEKKLSGRTWNNKVAHMRAIFNYGIQRGLLHYDENPFNNSVVKPDKKRKKTLTQAQIEYA  121
            + +K+  RTWN K  HM++++NY I++G++   ENPF+++ + P+ K+KK  TQ+Q+   
Sbjct  76   NIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTI  135

Query  122  YQIMEQYENQEN--TGLGLKYSRCALFPAWFWLTVLDTLYYTGIRQNQLLHIRLNDVDLR  179
            Y+I+EQ+++QEN        +  CA++P++FW++VL+TL  T+IR NQL+++++ D+D+ 
Sbjct  136  YRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  180  EGQIRLITEGCKNHKEHYVPVISFLRPRLTCLMEKAQSEGLKGNDRLFNIALFTGKDPAI  239
            E  I L +E+ KNH+E  ++ +  LR  L+ L+E  + +G   ND LF++  +  K  + 
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSR  255

Query  240  GDDMDSPQVRAFFRRLSKECQFAISPHRFRHTLATEMMKMPEQNLHMAQSVLGHSNMKST  299
            ++   S  +R+FFRRLSKEC F +SPHRFRHTLAT +MK PE+N+++++ +LGH ++ ST
Sbjct  256  SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  300  LEYVENDIAVMGRALEAQF  318
            +EY+  D     R LE ++
Sbjct  316  MEYIALDAYSTVRILENEL  334

18) STBHUCCB_46130 in NC_016832


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  220 bits (818),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 128/319 (41%), Positives = 218/319 (69%), Gaps = 6/319 (1%)

Query  6    TWQQLIDEYFFAKPLRSASEWSYTKVFKSFVHYMG----PLSCPNDVTYHKVLAWRRFLL  61
             W+Q++ +YF+ K LR+ +E +Y K+ + F++Y G    +L+ P++VT + VL WRR  L
Sbjct  16   VWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNEL  75

Query  62   KEKKLSGRTWNNKVAHMRAIFNYGIQRGLLHYDENPFNNSVVKPDKKRKKTLTQAQIEYA  121
            + +K+  RTWN K  HM++++NY I++G++   ENPF+++ + P+ K+KK  TQ+Q+   
Sbjct  76   NIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTI  135

Query  122  YQIMEQYENQEN--TGLGLKYSRCALFPAWFWLTVLDTLYYTGIRQNQLLHIRLNDVDLR  179
            Y+I+EQ+++QEN        +  CA++P++FW++VL+TL  T+IR NQL+++++ D+D+ 
Sbjct  136  YRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  180  EGQIRLITEGCKNHKEHYVPVISFLRPRLTCLMEKAQSEGLKGNDRLFNIALFTGKDPAI  239
            E  I L +E+ KNH+E  ++ +  LR  L+ L+E  + +G   ND LF++  +  K  + 
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSR  255

Query  240  GDDMDSPQVRAFFRRLSKECQFAISPHRFRHTLATEMMKMPEQNLHMAQSVLGHSNMKST  299
            ++   S  +R+FFRRLSKEC F +SPHRFRHTLAT +MK PE+N+++++ +LGH ++ ST
Sbjct  256  SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  300  LEYVENDIAVMGRALEAQF  318
            +EY+  D     R LE ++
Sbjct  316  MEYIALDAYSTVRILENEL  334

19) TY21A_22190 in NC_021176


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  220 bits (818),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 128/319 (41%), Positives = 218/319 (69%), Gaps = 6/319 (1%)

Query  6    TWQQLIDEYFFAKPLRSASEWSYTKVFKSFVHYMG----PLSCPNDVTYHKVLAWRRFLL  61
             W+Q++ +YF+ K LR+ +E +Y K+ + F++Y G    +L+ P++VT + VL WRR  L
Sbjct  16   VWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNEL  75

Query  62   KEKKLSGRTWNNKVAHMRAIFNYGIQRGLLHYDENPFNNSVVKPDKKRKKTLTQAQIEYA  121
            + +K+  RTWN K  HM++++NY I++G++   ENPF+++ + P+ K+KK  TQ+Q+   
Sbjct  76   NIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTI  135

Query  122  YQIMEQYENQEN--TGLGLKYSRCALFPAWFWLTVLDTLYYTGIRQNQLLHIRLNDVDLR  179
            Y+I+EQ+++QEN        +  CA++P++FW++VL+TL  T+IR NQL+++++ D+D+ 
Sbjct  136  YRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  180  EGQIRLITEGCKNHKEHYVPVISFLRPRLTCLMEKAQSEGLKGNDRLFNIALFTGKDPAI  239
            E  I L +E+ KNH+E  ++ +  LR  L+ L+E  + +G   ND LF++  +  K  + 
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSR  255

Query  240  GDDMDSPQVRAFFRRLSKECQFAISPHRFRHTLATEMMKMPEQNLHMAQSVLGHSNMKST  299
            ++   S  +R+FFRRLSKEC F +SPHRFRHTLAT +MK PE+N+++++ +LGH ++ ST
Sbjct  256  SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  300  LEYVENDIAVMGRALEAQF  318
            +EY+  D     R LE ++
Sbjct  316  MEYIALDAYSTVRILENEL  334

20) t4357 in NC_004631


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  220 bits (818),  Expect = 1e-58, Method: Compositional matrix adjust.
 Identities = 128/319 (41%), Positives = 218/319 (69%), Gaps = 6/319 (1%)

Query  6    TWQQLIDEYFFAKPLRSASEWSYTKVFKSFVHYMG----PLSCPNDVTYHKVLAWRRFLL  61
             W+Q++ +YF+ K LR+ +E +Y K+ + F++Y G    +L+ P++VT + VL WRR  L
Sbjct  16   VWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNEL  75

Query  62   KEKKLSGRTWNNKVAHMRAIFNYGIQRGLLHYDENPFNNSVVKPDKKRKKTLTQAQIEYA  121
            + +K+  RTWN K  HM++++NY I++G++   ENPF+++ + P+ K+KK  TQ+Q+   
Sbjct  76   NIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTI  135

Query  122  YQIMEQYENQEN--TGLGLKYSRCALFPAWFWLTVLDTLYYTGIRQNQLLHIRLNDVDLR  179
            Y+I+EQ+++QEN        +  CA++P++FW++VL+TL  T+IR NQL+++++ D+D+ 
Sbjct  136  YRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  180  EGQIRLITEGCKNHKEHYVPVISFLRPRLTCLMEKAQSEGLKGNDRLFNIALFTGKDPAI  239
            E  I L +E+ KNH+E  ++ +  LR  L+ L+E  + +G   ND LF++  +  K  + 
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSR  255

Query  240  GDDMDSPQVRAFFRRLSKECQFAISPHRFRHTLATEMMKMPEQNLHMAQSVLGHSNMKST  299
            ++   S  +R+FFRRLSKEC F +SPHRFRHTLAT +MK PE+N+++++ +LGH ++ ST
Sbjct  256  SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  300  LEYVENDIAVMGRALEAQF  318
            +EY+  D     R LE ++
Sbjct  316  MEYIALDAYSTVRILENEL  334

21) plu1029 in NC_005126


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  219 bits (814),  Expect = 2e-58, Method: Compositional matrix adjust.
 Identities = 143/326 (44%), Positives = 222/326 (69%), Gaps = 6/326 (1%)

Query  5    TWDNLLDEYFFARILRPDTESSYRKVVNTFKVFAGVSNR----PAQVTRQQVLAWRRYVL  60
             W+++L +YF+ ++LRPDTE +YRK+V  F  + GV +     P +VT+++VL WRR  L
Sbjct  16   VWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNEL  75

Query  61   HQSGLKGVTWNSKIAHMRSVFNLAIEEKILPQTENPFIGVEVNENKNkkktltkkqlttl  120
            +   ++  TWN+K  HM+S++N  I   I++  ENPF   +++   ++KK  T+ QL T+
Sbjct  76   NIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTI  135

Query  121  yltMGQFEERER--RTGDNHRARCALYPTWYWLTVLDTLRYTGMRQNQLLHIRLGDIDLD  178
            Y  + QF+++E     ++ H   CA+YPT++W++VL+TLR T++R NQL+++++GD+D++
Sbjct  136  YRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  179  VRRIILCSEGSKNHYEHQVPVVKWLYPRLEILLERAQAAGAKPSDPLFCVNYFTAKTDRG  238
               I L SE+SKNH E Q++ V+ L   L  L+E  +  GA  +D LF V+ +  K    
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSR  255

Query  239  SETDQLQTIKSFFRRLSKECGFDVGPHRFRHTLATELMKAPDRNLQMVRGLLGHRSIATT  298
            SET   QTI+SFFRRLSKECGF+V+PHRFRHTLAT LMK P+RN+Q+ + +LGHRS+++T
Sbjct  256  SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  299  MEYIDINLDIAGRALERELMLYIDVE  324
            MEYI ++   + R LE EL  ++ + 
Sbjct  316  MEYIALDAYSTVRILENELGEFLTMG  341

22) plu1166 in NC_005126


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  217 bits (809),  Expect = 6e-58, Method: Compositional matrix adjust.
 Identities = 143/326 (44%), Positives = 222/326 (69%), Gaps = 6/326 (1%)

Query  5    TWDNLLDEYFFAKILRPATESSYRKVVNTFQVFAGADNR----PAQVTRQQVLAWRRYVL  60
             W+++L +YF+ K+LRP TE +YRK+V  F  + G  +     P +VT+++VL WRR  L
Sbjct  16   VWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNEL  75

Query  61   HQRGLKGVTWNSKIAHMRSVFNLAIEEKILPQTENPFIGVEVNENKNkkktltkkqlttl  120
            + + ++  TWN+K  HM+S++N  I   I++  ENPF   +++   ++KK  T+ QL T+
Sbjct  76   NIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTI  135

Query  121  yltMGQFEERER--RTGDNHRARCALYPTWYWLTVLDTLRYTGMRQNQLLHIRLGDIDLD  178
            Y  + QF+++E     ++ H   CA+YPT++W++VL+TLR T++R NQL+++++GD+D++
Sbjct  136  YRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  179  ERRIILCSEGSKNHYEHQVPVVKWLYPRLEILLERAQAAGAKPSDPLFCVNYFTAKTDRG  238
            E  I L SE+SKNH E Q++ V+ L   L  L+E  +  GA  +D LF V+ +  K    
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSR  255

Query  239  SETDQLQTIKSFFRRLSKECGFDVGPHRFRHTLATELMKAPDRNLQMVRGLLGHRSIATT  298
            SET   QTI+SFFRRLSKECGF+V+PHRFRHTLAT LMK P+RN+Q+ + +LGHRS+++T
Sbjct  256  SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  299  MEYIDINLDIAGRALERELMLYIDVE  324
            MEYI ++   + R LE EL  ++ + 
Sbjct  316  MEYIALDAYSTVRILENELGEFLTMG  341

23) ECA0614 in NC_004547


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  209 bits (778),  Expect = 2e-55, Method: Compositional matrix adjust.
 Identities = 135/329 (42%), Positives = 226/329 (69%), Gaps = 13/329 (3%)

Query  3    DKSMTWDEIVDEYFFSHNLREATEISYRKVVSGFSRFMGETVS----PAQITHRDVLKWR  58
            +K   W++++ +YF++  LR  TE +YRK+V  F R+ G   +    P ++TH +VL+WR
Sbjct  12   QKVDVWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWR  71

Query  59   RNLLKERNLSTHTWNNKVAHMRAIFNFSIERNLIDQDKNPFNDAvvqkerkkkktltreq  118
            RN L+ +++  +TWN K  HM++++N+ I + ++    NPF+++ ++   K+KK  T+ Q
Sbjct  72   RNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQ  131

Query  119  lTAIYLLMQRIETEE----PHAIWGLRCALYPAWYWLTVLDALRYTGMRQNQLLHIRLQD  174
            L +IY ++++++ +E    P+      CA+YP+++W++VL++LR T++R NQL+++++ D
Sbjct  132  LRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGD  191

Query  175  INLDEGYIELRLEGSKTHREWRVPAVrqlrarlasliaraklaGAEPSDILFDVTRFMKS  234
            ++++E  I LR E+SK HRE +++ V+ LR  LA+L+   +  GA+ +DILFDV R+   
Sbjct  192  LDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHK  251

Query  235  RRHKDEYQYDEARAQQAIRSFFNRLSRDCGFLVSAHRFRHTLATELMKAPERNLLLVKDL  294
            R  + E     +   Q+IRSFF RLS++CGF VS+HRFRHTLAT LMK PERN+ L K++
Sbjct  252  RLSRSE-----TPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQM  306

Query  295  LGHRNVSTTMEYVELNMEIVGRTLEKELA  323
            LGHR++S+TMEY+ L+     R LE+EL+
Sbjct  307  LGHRSLSSTMEYIALDAYSTVRILENELG  335

24) CFSAN002050_21945 in NC_021818


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  208 bits (774),  Expect = 3e-55, Method: Compositional matrix adjust.
 Identities = 136/326 (42%), Positives = 214/326 (66%), Gaps = 16/326 (4%)

Query  9    LWQELMDEYFFCKSLREDTEWSYKKVVRGFRKHIGEACP-----PYGITSRDVLEWRRHV  63
            +W++++ +YF+ K LR DTE +Y+K+VR F +  G  C      P  +T  +VL WRR+ 
Sbjct  16   VWEQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCG-VCENALPLPDEVTHEHVLRWRRNE  74

Query  64   LKKQCLSAHTWNNKVSHMRALYNFAITSQLTNLSKNPFNGVSVkqdkkrkktltkNQMTK  123
            L+ Q +  +TWN K  HM++LYN+ I   + +L  NPF+   +  + K+KK  T++Q+  
Sbjct  75   LNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRT  134

Query  124  IWLTMQQFASE----PRTESK---CALRPVWYWLTVLDTLRYTGMRQNQLLHIRLKDVSL  176
            I   ++QF  +    P  ++    CA+ P ++W++VL+TLR T++R NQL+++++ D+ +
Sbjct  135  IYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDF  194

Query  177  DDGWIELRAEGSKTYREWRVPVVSHLRPRLEALLQRARDCGAGNNDALFHYERFVSSPAE  236
            ++  I LR+E+SK  RE +++ V  LR  L +L++  R  GA++ND LF+ +R+      
Sbjct  195  EECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLS  254

Query  237  RASLSEKPSLQPLRSFFRRLSKECGFDVSPHRFRHTLATTLMSSPERNLQLVKGLLGHRN  296
            R   SE P  Q +RSFFRRLSKECGF+VSPHRFRHTLATTLM  PERN+QL K +LGHR+
Sbjct  255  R---SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRS  311

Query  297  VSTTMEYVDISMDIVSQALEKEMALY  322
            +S+TMEY+ +      + LE+E++ +
Sbjct  312  LSSTMEYIALDAYSTVRILENELGEF  337

25) YpsIP31758_3686 in NC_009708


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  208 bits (773),  Expect = 4e-55, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 213/303 (71%), Gaps = 7/303 (2%)

Query  7    DEILQDYFFSKSLRPATEWSYRKVINSFRRYIG---DNL-LPGEVDRLTVLNWRRHVLNK  62
            +++L +YF++K LRP TE +YRK++  F RY G   + L LP+EV +  VL WRR+ LN 
Sbjct  18   EQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELNI  77

Query  63   QGLSSITWNNKVAHMRAIFNHALLHDLVSFKNNPFNGVIVRPDVKRKKTLTQSEIKKIYL  122
            Q +   TWN K  HM++++N  +  ++VS+K+NPF+   + P+ K+KK  TQS+++ IY 
Sbjct  78   QKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIYR  137

Query  123  IMEAREREEHVGIMGKSR---SALRPAWFWLTVVDTLRYTGMRQNQLLHIRLGDVNLNDG  179
            I+E  +++E++   ++++    A+ P++FW++V++TLR T++R NQL+++++GD+++++ 
Sbjct  138  ILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFEEC  197

Query  180  WINLRPEASKNHKEHRIPIARVLRPRLERLVATAIEKGANQVDQLFNISRIDGRKETVTE  239
             I LR+E+SKNH+E +I++ + LR  L  LV      GA++ D LF++ R+  ++ + +E
Sbjct  198  TITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSRSE  257

Query  240  NMDSPPLRSFFRRLSVECRCTISPHRFRHTIATEMMKSPDRNLKVVQTLLGHSSIAVTLE  299
               S  +RSFFRRLS EC   +SPHRFRHT+AT +MK P+RN+++ + +LGH S++ T+E
Sbjct  258  TPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSSTME  317

Query  300  YVE  302
            Y+ 
Sbjct  318  YIA  320

26) Y11_23521 in NC_017564


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  207 bits (770),  Expect = 7e-55, Method: Compositional matrix adjust.
 Identities = 132/319 (42%), Positives = 217/319 (69%), Gaps = 8/319 (2%)

Query  7    ELLLDKYFFSKSLRPTTEWSYQKVVNSFEQYTP------KLPHEINDQIVLEWRRYVLND  60
            E +L +YF++K LRP TE +Y+K+V  F +Y         LP+E+ ++ VL WRR  LN 
Sbjct  18   EQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELNI  77

Query  61   LRLEPRTWNNKVAHLRALFNFGMKKKLLKHEENPFNGSVVRAGIKKKKILTLGQMNSLYL  120
             ++  RTWN K  H+++L+N+ +KK ++   ENPF+ + + +G K+KK+ T +Q+ ++Y 
Sbjct  78   QKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIYR  137

Query  121  LMKQYCERERDLPASHCFNTRNHAFYPSWFWLTLLDVLRYTGVRQNQLLHLRLCDINLDE  180
            ++ Q+ ++E  LP+ +  + +  A YP++FW+++L+ LR T++R NQL++L++ D++++E
Sbjct  138  ILEQFQQQENMLPPDQA-HFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFEE  196

Query  181  RSIELRIAGSKNHKEHRVPIVSALFPQLELLVNRALDAGAEPQDQLFNVGRFDLRRRDKY  240
             +I LR  +SKNH+E ++++V +L   L  LV+     GA+ +D LF+V R+  +R  + 
Sbjct  197  CTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSRS  256

Query  241  PLEMDQYPLRAFFRRLSKECRFTVSPHRFRHTIATHMMKSPDRNLQAVKKLLGHVSIQST  300
               + Q  +R+FFRRLSKEC F VSPHRFRHT+AT +MK P+RN+Q  K++LGH S+ ST
Sbjct  257  ETPLSQ-TIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  301  LEYIDENVDSLRDILEKEL  319
            +EYI  +  S   ILE+EL
Sbjct  316  MEYIALDAYSTVRILENEL  334

27) YE105_C3207 in NC_015224


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  207 bits (769),  Expect = 8e-55, Method: Compositional matrix adjust.
 Identities = 131/319 (42%), Positives = 216/319 (68%), Gaps = 8/319 (2%)

Query  7    ELLLDKYFFSKSLRPTTEWSYQKVVNSFEQYTP------KLPHEINDQIVLEWRRYVLND  60
            E +L +YF++K LRP TE +Y+K+V  F +Y         LP+E+ ++ VL WRR  LN 
Sbjct  18   EQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELNI  77

Query  61   LRLEPRTWNNKVAHLRALFNFGMKKKLLKHEENPFNGSVVRAGIKKKKILTLGQMNSLYL  120
             ++  RTWN K  H+++L+N+ +KK ++   ENPF+ + + +G K+KK+ T +Q+ ++Y 
Sbjct  78   QKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIYR  137

Query  121  LMKQYCERERDLPASHCFNTRNHAFYPSWFWLTLLDVLRYTGVRQNQLLHLRLCDINLDE  180
            ++ Q+ ++E  LP+ +  + +  A YP++FW+++L+ LR T++R NQL++L++ D++++E
Sbjct  138  ILEQFQQQENMLPPDQA-HFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFEE  196

Query  181  RSIELRIAGSKNHKEHHVPIVSALFPQLELLVNRALDAGAEPQDQLFNVGRFDLRRRDKY  240
             +I LR  +SKNH+E ++++V +L   L  LV+     GA+ +D LF+V R+  +R  + 
Sbjct  197  CTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSRS  256

Query  241  PLEMDQYPLRAFFRRLSKECRFTVSPHRFRHTIATHMMKSPDRNLQAVKKLLGHVSIQSI  300
               + Q  +R+FFRRLSKEC F VSPHRFRHT+AT +MK P+RN+Q  K++LGH S+ S 
Sbjct  257  ETPLSQ-TIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  301  LEYIDENVDSLRDILEKEL  319
            +EYI  +  S   ILE+EL
Sbjct  316  MEYIALDAYSTVRILENEL  334

28) YE3450 in NC_008800


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  206 bits (765),  Expect = 2e-54, Method: Compositional matrix adjust.
 Identities = 124/303 (41%), Positives = 211/303 (70%), Gaps = 7/303 (2%)

Query  11   DDILQDYFFSKSLRPATEWSYRKVINSFRRYIG---DNL-LPGEVDRQIVLNWRRHVLNK  66
            +++L +YF++K LRP TE +YRK++  F RY G   + L LP+EV ++ VL WRR+ LN 
Sbjct  18   EQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELNI  77

Query  67   QGLSSITWNNKVAHMRAIFNHALLYDLVVLKHNPFNGVIVRPDVKRKKTLTQSEIEKIYL  126
            Q +   TWN K  HM++++N  +  ++V LK+NPF+   + P+ K+KK  TQS++  IY 
Sbjct  78   QKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIYR  137

Query  127  IMEAREREEHVGIMDKSR---SALRPAWFWLTVVDILRYTGMRQNQLLHIRLGDVNLNDG  183
            I+E  +++E++   D+++    A+ P++FW++V++ LR T++R NQL+++++GD+++++ 
Sbjct  138  ILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFEEC  197

Query  184  WINLRSEASKNHKEHRVPIARVLRPRLERLVAAAIDKGANQADQLFNISRFDGRKESITE  243
             I LRSE+SKNH+E ++++ + LR  L  LV      GA++ D LF++ R+  ++ S +E
Sbjct  198  TITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSRSE  257

Query  244  NMDNPPLRSFFRRLSVECRCTISPHRFRHTIATEMMKSPDRNLKVVQTLLGHSSIAVTLE  303
               +  +RSFFRRLS EC   +SPHRFRHT+AT +MK P+RN+++ + +LGH S++ T+E
Sbjct  258  TPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSSTME  317

Query  304  YVE  306
            Y+ 
Sbjct  318  YIA  320

29) Ser39006_1551 in NC_022268


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  205 bits (763),  Expect = 3e-54, Method: Compositional matrix adjust.
 Identities = 122/303 (41%), Positives = 209/303 (69%), Gaps = 7/303 (2%)

Query  7    DDILQDYFFSKVLRPATELSYRKVVNSFRRY----TEDKVLPGQVNRLTVLNWRRYILNE  62
            +++L +YF++KVLRP TE +YRK+V  F RY     +   LP++V +  VL WRR  LN 
Sbjct  18   EQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELNI  77

Query  63   QCLSSITWNNKVAHMRAIYNHVLQQQIIPLKDNPFNGVVVRPDIKRKKTLTESEIKKIYL  122
            Q +   TWN K  HM+++YN  +++ I++LK+NPF+   + P+ K+KK  T+S+++ IY 
Sbjct  78   QKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIYR  137

Query  123  LLEAREKEEGLGITEKIR---SALRPAWYWLSVVDTLRYTGMRQNQLLNIRLEDVQLEEG  179
            +LE  +++E +   ++ +    A+ P+++W++V++TLR T++R NQL+N+++ D+++EE 
Sbjct  138  ILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFEEC  197

Query  180  WINLRSEASKNHREHRVPITRLLRPRLERLIMVATERGATHSDMLFNASRFDGRKNMLTD  239
             I LRSE+SKNHRE ++++ + LR  L  L+     +GA  +D+LF+  R+  ++   ++
Sbjct  198  TITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSRSE  257

Query  240  VMAYQPLRAFFRRLSKECQCTITPHRFRHTIATDMMKSPDRNLKVVQTLLGHSSVAVTLE  299
                Q +R+FFRRLSKEC   ++PHRFRHT+AT +MK P+RN+++ + +LGH S++ T+E
Sbjct  258  TPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSSTME  317

Query  300  YVE  302
            Y+ 
Sbjct  318  YIA  320

30) ECL_00532 in NC_014121


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  197 bits (731),  Expect = 9e-52, Method: Compositional matrix adjust.
 Identities = 128/318 (41%), Positives = 212/318 (67%), Gaps = 9/318 (2%)

Query  8    EKILDDYFFNKVLRRATEWSYRKVVRTFLEFYG--EDILP--ENVTRMDVLKWRRYVLNE  63
            E++L +YF+NKVLR  TE +YRK+VR FL + G  E+ LP  ++VT+ +VL+WRR  LN 
Sbjct  18   EQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELNI  77

Query  64   QMSSKRTWNNKVAHMRAVFNHAITNKLISARENPFNQVIVKPDIKRKKTLSGEQMKKIDL  123
            Q    RTWN K  HM++++N  I + ++S +ENPF++  + P+ K+KK  +  Q++ I  
Sbjct  78   QKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIYR  137

Query  124  IMERKIELEQMGVHDP---RPNALEPAWFWMTVIETLKFTGMRQNQLLHIRLCDVDLKLG  180
            I+E+  + E+M   D    ++ A+ P++FW +V+ETL++T++R NQL+++++ D+D+   
Sbjct  138  ILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFEEC  197

Query  181  IIELQAEGSKNHREHRVPITARLRPRLEQLYLMSVQKGSKKGEQLFNINRFTPKKKRIIR  240
             I L++E+SKNHRE ++++   LR  L  L       G+ K + LF+++R+  K  R+ R
Sbjct  198  TITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHK--RLSR  255

Query  241  AKNMDHLPMRAFFRRLSRECQCDISPHRFRHTIATDLMKRPERSLNDVQMLLGHSSVAVT  300
            +       +R+FFRRLS+EC  ++SPHRFRHT+AT LMK+PER+++  + +LGH S++ T
Sbjct  256  SETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSST  315

Query  301  LEYVEANMDNLRRNLEAA  318
            +EY+  +  +  R LE  
Sbjct  316  MEYIALDAYSTVRILENE  333

31) KPHS_44700 in NC_016845


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  188 bits (699),  Expect = 2e-49, Method: Compositional matrix adjust.
 Identities = 118/269 (44%), Positives = 188/269 (70%), Gaps = 7/269 (2%)

Query  2    VLRWKEEVLKVQGLKVRTWNNKVAHMRALFNFAIKKKLFQ-EENPFNGVVACPGVKRKKT  60
            VLRW+ + L++Q ++ RTWN K  HM++L+N+ IKK +    ENPF+     PG K+KK 
Sbjct  67   VLRWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKV  126

Query  61   LSDSQLETVYRVMQQQRGREQ----SGDRYRN-ALAPAWFWTAVLDILRYTAIRQNQFLH  115
             ++SQL T+YR+++Q + +E+       +++  A+ P++FW AVL+ LR TAIR NQ+++
Sbjct  127  YTQSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLIN  186

Query  116  IRISDVDFDSHCIHLRLEGAKNHREHQVPIISALRPSLEELVSQVTKAGAMPHEQLFNIA  175
            ++I+D+DF+   I LR E++KNHRE Q++++ +LR  L  LV ++   GA  ++ LF++ 
Sbjct  187  LHIGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVH  246

Query  176  WFDFRRKANYQDGMTKVPLRSFFRRLSRECGFLVSPHRFRHTIATKLMRTPERNLQTVKT  235
            ++ ++++ +  +      +RSFFRRLS+ECGF VSPHRFRHT+AT LM+ PERN+Q  K 
Sbjct  247  RL-YHKRLSRSETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQ  305

Query  236  LLGHVSLASTLEYVEVNIESLKATLEQEL  264
            +LGH SL+ST+EY+ ++  S    LE+EL
Sbjct  306  MLGHRSLSSTMEYIALDAYSTVRILENEL  334

32) N559_0834 in NC_022082


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  187 bits (695),  Expect = 4e-49, Method: Compositional matrix adjust.
 Identities = 117/269 (44%), Positives = 188/269 (70%), Gaps = 7/269 (2%)

Query  1    MLRWKEEVLKVQGLKVRTWNNKVAHMRALFNFAIKKKLFQ-EENPFNGVVACPGVKRKKT  59
            +LRW+ + L++Q ++ RTWN K  HM++L+N+ IKK +    ENPF+     PG K+KK 
Sbjct  67   VLRWRRNELNIQKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKV  126

Query  60   LSDSQLETVYRVMQQQRGREQ----SGDRYRN-ALAPAWFWTAVLDILRYTAIRQNQFLH  114
             ++SQL T+YR+++Q + +E+       +++  A+ P++FW AVL+ LR TAIR NQ+++
Sbjct  127  YTQSQLRTIYRILEQFQQQENMLPPDQAHFQACAVYPTRFWFAVLETLRLTAIRFNQLIN  186

Query  115  IRISDVDFDSHCIHLRLEGAKNHREHQVPIISALRPSLEELVSQVTKAGAMPHEQLFNIA  174
            ++I+D+DF+   I LR E++KNHRE Q++++ +LR  L  LV ++   GA  ++ LF++ 
Sbjct  187  LHIGDLDFEECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVH  246

Query  175  WFDFRRKANYQDGMTKVPLRSFFRRLSRECGFLVSPHRFRHTIATKLMRTPERNLQTVKT  234
            ++ ++++ +  +      +RSFFRRLS+ECGF VSPHRFRHT+AT LM+ PERN+Q  K 
Sbjct  247  RL-YHKRLSRSETPLSQTIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQ  305

Query  235  LLGHVSLASTLEYVEVNIESLKATLEQEL  263
            +LGH SL+ST+EY+ ++  S    LE+EL
Sbjct  306  MLGHRSLSSTMEYIALDAYSTVRILENEL  334

33) LF82_703 in NC_011993


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  182 bits (676),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 129/320 (41%), Positives = 211/320 (66%), Gaps = 10/320 (3%)

Query  7    GTLTEHYFYSKSLRPATEWSYQKVVRSFEGFTP------HNPANIDHLTVLKWRHRVLND  60
              +  +YFY+K LRP TE +Y+K+VR F  +          P ++ H  VL+WR+  LN 
Sbjct  18   EQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELNI  77

Query  61   QNCATRTWNNKVAHMRALFNFGIKQGLLPQAENPFNGAVVRPGtkkkktltqtqMDAMYR  120
            Q+   RTWN K  HM++L+N+ IK+G+++  ENPF+ + + PG K+KK  TQ+Q+ ++YR
Sbjct  78   QKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIYR  137

Query  121  LMERHLETEGR-KGNSSMFNGRRNALRPVWFWLTVMNVFRYTAIRQNQLLHIRLGDINLE  179
            ++E+  + E     + + F++   A+ P +FW++V++ +R TAIR NQL+++++GD+++E
Sbjct  138  ILEQFQQQENMLPPDQAHFQA--CAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  180  ERWIDLNIEGAKNHREHRVPIVSALYPSLELLVLRAGEVGMELDDQLFNVGWFDLVRKKK  239
            E  I L  E++KNHRE ++++V +L   L  LV      G + +D LF+V ++   R  +
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSR  255

Query  240  YPEVMNEYPLRAFFKRLSRECKFTISPHRFRHTVATHMMKSPERNLYVVKKLLGHVSITS  299
                +++  +R+FF+RLS+EC F +SPHRFRHT+AT +MK PERN+ + K++LGH S++S
Sbjct  256  SETPLSQ-TIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSS  314

Query  300  TLEYIDENVDSLRNILETEL  319
            T+EYI  +  S   ILE EL
Sbjct  315  TMEYIALDAYSTVRILENEL  334

34) NRG857_21025 in NC_017634


> NC_010554_P1|3|G1|197286396|YP_002152268.1|Proteus_mirabilis_HI4320|-|310..1380|-|PMI2549|phage 
integrase
Length=356

 Score =  182 bits (676),  Expect = 2e-47, Method: Compositional matrix adjust.
 Identities = 129/320 (41%), Positives = 211/320 (66%), Gaps = 10/320 (3%)

Query  7    GTLTEHYFYSKSLRPATEWSYQKVVRSFEGFTP------HNPANIDHLTVLKWRHRVLND  60
              +  +YFY+K LRP TE +Y+K+VR F  +          P ++ H  VL+WR+  LN 
Sbjct  18   EQMLSNYFYNKVLRPDTEKTYRKMVRLFLRYCGVCENALPLPDEVTHEHVLRWRRNELNI  77

Query  61   QNCATRTWNNKVAHMRALFNFGIKQGLLPQAENPFNGAVVRPGtkkkktltqtqMDAMYR  120
            Q+   RTWN K  HM++L+N+ IK+G+++  ENPF+ + + PG K+KK  TQ+Q+ ++YR
Sbjct  78   QKVRERTWNTKTRHMQSLYNYWIKKGIVSLKENPFSETQIEPGEKQKKVYTQSQLRTIYR  137

Query  121  LMERHLETEGR-KGNSSMFNGRRNALRPVWFWLTVMNVFRYTAIRQNQLLHIRLGDINLE  179
            ++E+  + E     + + F++   A+ P +FW++V++ +R TAIR NQL+++++GD+++E
Sbjct  138  ILEQFQQQENMLPPDQAHFQA--CAVYPTRFWFAVLETLRLTAIRFNQLINLHIGDLDFE  195

Query  180  ERWIDLNIEGAKNHREHRVPIVSALYPSLELLVLRAGEVGMELDDQLFNVGWFDLVRKKK  239
            E  I L  E++KNHRE ++++V +L   L  LV      G + +D LF+V ++   R  +
Sbjct  196  ECTITLRSESSKNHREYQIAFVQPLRCLLAPLVEEMRCHGADKNDILFDVHRLYHKRLSR  255

Query  240  YPEVMNEYPLRAFFKRLSRECKFTISPHRFRHTVATHMMKSPERNLYVVKKLLGHVSITS  299
                +++  +R+FF+RLS+EC F +SPHRFRHT+AT +MK PERN+ + K++LGH S++S
Sbjct  256  SETPLSQ-TIRSFFRRLSKECGFHVSPHRFRHTLATTLMKHPERNMQLTKQMLGHRSLSS  314

Query  300  TLEYIDENVDSLRNILETEL  319
            T+EYI  +  S   ILE EL
Sbjct  315  TMEYIALDAYSTVRILENEL  334