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Homologs of SAB0344 gene of NC_007622_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) C248_0450
( YP_006709211.1 )

phage protein

NC_018608
(Staphylococcus aureus 08BA02176)

2e-29

100

2) SAOV_0416
( YP_005735932.1 )

hypothetical protein

NC_017337
(Staphylococcus aureus ED133)

2e-29

100

3) SAB0344
( YP_415846.1 )

pathogenicity island protein

NC_007622
(Staphylococcus aureus RF122)

2e-29

100

4) SAPIG0471
( YP_005733281.1 )

hypothetical protein

NC_017333
(Staphylococcus aureus ST398)

2e-29

100

5) HD73_5533
( YP_007424631.1 )

hypothetical protein

NC_020238
(Bacillus cereus HD73)

3e-09

6) BTG_22735
( YP_006605992.1 )

hypothetical protein

NC_018500
(Bacillus thuringiensis HD-771)

3e-09

7) CBO3044
( YP_001255536.1 )

tracriptional regulatory protein

NC_009495
(Clostridium botulinum ATCC 3502)

0.027

8) CLB_3071
( YP_001385365.1 )

DNA-binding protein

NC_009697
(Clostridium botulinum ATCC 19397)

0.14

9) CLC_2943
( YP_001388772.1 )

DNA-binding protein

NC_009698
(Clostridium botulinum Hall)

0.14

10) CLK_2435
( YP_001788363.1 )

DNA-binding protein

NC_010520
(Clostridium botulinum Loch Maree)

0.14

11) CLJ_B3307
( YP_002864051.1 )

DNA-binding protein

NC_012658
(Clostridium botulinum 657)

0.15

• Sequence Alignments

1) C248_0450 in NC_018608


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK  60
           MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK
Sbjct  1   MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK  60

Query  61  IISEFLDIDKEVFFI  75
           IISEFLDIDKEVFFI
Sbjct  61  IISEFLDIDKEVFFI  75

2) SAOV_0416 in NC_017337


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK  60
           MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK
Sbjct  1   MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK  60

Query  61  IISEFLDIDKEVFFI  75
           IISEFLDIDKEVFFI
Sbjct  61  IISEFLDIDKEVFFI  75

3) SAB0344 in NC_007622


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK  60
           MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK
Sbjct  1   MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK  60

Query  61  IISEFLDIDKEVFFI  75
           IISEFLDIDKEVFFI
Sbjct  61  IISEFLDIDKEVFFI  75

4) SAPIG0471 in NC_017333


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score =  121 bits (444),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 75/75 (100%), Positives = 75/75 (100%), Gaps = 0/75 (0%)

Query  1   MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK  60
           MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK
Sbjct  1   MFTKKSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIK  60

Query  61  IISEFLDIDKEVFFI  75
           IISEFLDIDKEVFFI
Sbjct  61  IISEFLDIDKEVFFI  75

5) BTG_22735 in NC_018500


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 32/72 (45%), Positives = 52/72 (73%), Gaps = 1/72 (1%)

Query  4   KEEIRKKYLKPKRILKRERMARDITIAEMAIALGINRDAYSAKEKGKFSFSDYEMQVIKK  63
           K E+++++LKPK  LK ER+ R+++ + +A  +GI+R  Y +KEKG FSF DYE+++I  
Sbjct  5   KSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISE  64

Query  64  KLGLPIEYLFFI  75
            L++  E +FFI
Sbjct  65  FLDIDKE-VFFI  75

6) HD73_5533 in NC_020238


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score = 55.0 bits (189),  Expect = 3e-09, Method: Compositional matrix adjust.
 Identities = 32/72 (45%), Positives = 52/72 (73%), Gaps = 1/72 (1%)

Query  4   KEEIRKKYLKPKRILKRERMARDITIAEMAIALGINRDAYSAKEKGKFSFSDYEMQVIKK  63
           K E+++++LKPK  LK ER+ R+++ + +A  +GI+R  Y +KEKG FSF DYE+++I  
Sbjct  5   KSELKQQFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISE  64

Query  64  KLGLPIEYLFFI  75
            L++  E +FFI
Sbjct  65  FLDIDKE-VFFI  75

7) CBO3044 in NC_009495


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score = 32.2 bits (102),  Expect = 0.027, Method: Compositional matrix adjust.
 Identities = 27/65 (42%), Positives = 36/65 (56%), Gaps = 1/65 (1%)

Query  2   SFMTTAKKLKAYRCLRGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTI  61
            F+    KLK  R  RG     +A+LIG+    Y+ KE+G  SF   E KIIS+F+D   
Sbjct  11  QFLKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISEFLDID-  69

Query  62  DELFF  66
            E+FF
Sbjct  70  KEVFF  74

8) CLK_2435 in NC_010520


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score = 29.8 bits (93),  Expect = 0.14, Method: Compositional matrix adjust.
 Identities = 26/63 (42%), Positives = 35/63 (56%), Gaps = 1/63 (1%)

Query  1   MTTAKKLKAYRCLRGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDE  60
           +    KLK  R  RG     +A+LIG+    Y+ KE+G  SF   E KIIS+F+D    E
Sbjct  13  LKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISEFLDID-KE  71

Query  61  LFF  63
           +FF
Sbjct  72  VFF  74

9) CLB_3071 in NC_009697


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score = 29.8 bits (93),  Expect = 0.14, Method: Compositional matrix adjust.
 Identities = 26/63 (42%), Positives = 35/63 (56%), Gaps = 1/63 (1%)

Query  1   MTTAKKLKAYRCLRGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDE  60
           +    KLK  R  RG     +A+LIG+    Y+ KE+G  SF   E KIIS+F+D    E
Sbjct  13  LKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISEFLDID-KE  71

Query  61  LFF  63
           +FF
Sbjct  72  VFF  74

10) CLC_2943 in NC_009698


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score = 29.8 bits (93),  Expect = 0.14, Method: Compositional matrix adjust.
 Identities = 26/63 (42%), Positives = 35/63 (56%), Gaps = 1/63 (1%)

Query  1   MTTAKKLKAYRCLRGAKQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDE  60
           +    KLK  R  RG     +A+LIG+    Y+ KE+G  SF   E KIIS+F+D    E
Sbjct  13  LKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISEFLDID-KE  71

Query  61  LFF  63
           +FF
Sbjct  72  VFF  74

11) CLJ_B3307 in NC_012658


> NC_007622_P1|3|G3|82750105|YP_415846.1|Staphylococcus_aureus_RF122|+|2231..2458|-|SAB0344|pathogenicity 
island protein
Length=75

 Score = 29.5 bits (92),  Expect = 0.15, Method: Compositional matrix adjust.
 Identities = 26/63 (42%), Positives = 35/63 (56%), Gaps = 1/63 (1%)

Query  1   MTTAKKLKAYRCLRGARQEDIARLIGVSLNTYNFKENGKKSFTLNEAKIISDFFDTTIDE  60
           +    KLK  R  RG     +A+LIG+    Y+ KE+G  SF   E KIIS+F+D    E
Sbjct  13  LKPKTKLKEERLKRGLSATYLAQLIGIDRRQYESKEKGLFSFHDYEIKIISEFLDID-KE  71

Query  61  LFF  63
           +FF
Sbjct  72  VFF  74