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Homologs of SH2298 gene of NC_007168_R3

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SH2298
( YP_254213.1 )

hypothetical protein

NC_007168
(Staphylococcus haemolyticus JCSC1435)

4e-28

100

2) SLGD_02039
( YP_003472254.1 )

hypothetical protein

NC_013893
(Staphylococcus lugdunensis HKU09-01)

1e-04

3) SLUG_20110
( YP_005761126.1 )

membrane protein

NC_017353
(Staphylococcus lugdunensis N920143)

1e-04

4) SERP0456
( YP_188048.1 )

hypothetical protein

NC_002976
(Staphylococcus epidermidis RP62A)

0.004

• Sequence Alignments

1) SH2298 in NC_007168


> NC_007168_R3|3|G3|70727297|YP_254213.1|Staphylococcus_haemolyticus_JCSC1435|+|1159..1377|-|SH2298|hypothetical 
protein
Length=72

 Score =  117 bits (428),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 72/72 (100%), Positives = 72/72 (100%), Gaps = 0/72 (0%)

Query  1   MTIKQIVNDLLNKKWSLEDLFWLIFMCVIFSSFTTPFLGIPFGIIAYFILFYKDDDLDEM  60
           MTIKQIVNDLLNKKWSLEDLFWLIFMCVIFSSFTTPFLGIPFGIIAYFILFYKDDDLDEM
Sbjct  1   MTIKQIVNDLLNKKWSLEDLFWLIFMCVIFSSFTTPFLGIPFGIIAYFILFYKDDDLDEM  60

Query  61  KEKYDLQDKDKK  72
           KEKYDLQDKDKK
Sbjct  61  KEKYDLQDKDKK  72

2) SLGD_02039 in NC_013893


> NC_007168_R3|3|G3|70727297|YP_254213.1|Staphylococcus_haemolyticus_JCSC1435|+|1159..1377|-|SH2298|hypothetical 
protein
Length=72

 Score = 40.3 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 27/63 (43%), Positives = 47/63 (75%), Gaps = 2/63 (3%)

Query  1   MSIKEMWDYLVNKKWTSKDIGILIFYVIVASIFATPVLGIPLGVLAFLII--NEDVLDDN  58
           M+IK++ + L+NKKW+  D+  LIF  ++ S F+TP LGIP+G++A++I+  ++D LD+ 
Sbjct  1   MTIKQIVNDLLNKKWSLEDLFWLIFMCVIFSSFTTPFLGIPFGIIAYFILFYKDDDLDEM  60

Query  59  KKQ  61
           K +
Sbjct  61  KEK  63

3) SLUG_20110 in NC_017353


> NC_007168_R3|3|G3|70727297|YP_254213.1|Staphylococcus_haemolyticus_JCSC1435|+|1159..1377|-|SH2298|hypothetical 
protein
Length=72

 Score = 40.3 bits (133),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 27/63 (43%), Positives = 47/63 (75%), Gaps = 2/63 (3%)

Query  1   MSIKEMWDYLVNKKWTSKDIGILIFYVIVASIFATPVLGIPLGVLAFLII--NEDVLDDN  58
           M+IK++ + L+NKKW+  D+  LIF  ++ S F+TP LGIP+G++A++I+  ++D LD+ 
Sbjct  1   MTIKQIVNDLLNKKWSLEDLFWLIFMCVIFSSFTTPFLGIPFGIIAYFILFYKDDDLDEM  60

Query  59  KKQ  61
           K +
Sbjct  61  KEK  63

4) SERP0456 in NC_002976


> NC_007168_R3|3|G3|70727297|YP_254213.1|Staphylococcus_haemolyticus_JCSC1435|+|1159..1377|-|SH2298|hypothetical 
protein
Length=72

 Score = 34.8 bits (112),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 24/58 (42%), Positives = 42/58 (73%), Gaps = 2/58 (3%)

Query  1   MSLKEIWKVLINKKWQTEEICYLILYIFLASIFTTPLFGIPLGVLAY--LYLNEEILK  56
           M++K+I + L+NKKW  E++  LI+   + S FTTP++GIP+G++AY  L+ +++ L 
Sbjct  1   MTIKQIVNDLLNKKWSLEDLFWLIFMCVIFSSFTTPFLGIPFGIIAYFILFYKDDDLD  58