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PAthogenisity Island DataBase (PAI DB)

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Homologs of XC_3003 gene of NC_007086_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrcC
( YP_005636508.1 )

type III secretion outer membrane pore HrcC

NC_017271
(Xanthomonas campestris 756C)

0.0

100

2) XC_3003
( YP_244071.1 )

HrcC protein

NC_007086
(Xanthomonas campestris 8004)

0.0

100

3) hrcC
( NP_636613.1 )

HrcC protein

NC_003902
(Xanthomonas campestris ATCC 33913)

0.0

100

4) hrcC
( YP_001904471.1 )

HrcC protein

NC_010688
(Xanthomonas campestris B100)

0.0

100

5) hrcC
( YP_198733.1 )

hypothetical protein

NC_006834
(Xanthomonas oryzae KACC10331)

0.0

6) XOO_0082
( YP_449111.1 )

HrcC protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

0.0

7) hrpA1
( YP_001911288.1 )

HrpA type III secretion outer membrane pore, YscC/HrcC family

NC_010717
(Xanthomonas oryzae PXO99A)

0.0

8) hrcC
( YP_005630667.1 )

type III secretion outer membrane pore HrcC

NC_017267
(Xanthomonas oryzae BLS256)

0.0

9) hrcC
( YP_362166.1 )

HrcC protein

NC_007508
(Xanthomonas campestris 85-10)

0.0

10) hrcC
( NP_640770.1 )

HrcC protein

NC_003919
(Xanthomonas axonopodis 306)

0.0

11) XAC29_02125
( YP_007634918.1 )

HrcC protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

0.0

12) hrcC
( YP_007648840.1 )

HrcC protein

NC_020815
(Xanthomonas citri Aw12879)

0.0

13) hrcC
( YP_004850012.1 )

HrcC protein

NC_016010
(Xanthomonas axonopodis F1)

0.0

14) hrcC
( YP_004754975.1 )

HrcC

NC_015856
(Collimonas fungivorans Ter331)

6e-124

15) hrcC
( YP_006032365.1 )

type III secretion protein

NC_017575
(Ralstonia solanacearum Po82)

5e-119

16) F504_4344
( YP_008238073.1 )

Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG)

NC_021745
(Ralstonia solanacearum FQY_4)

4e-116

17) hrcC
( NP_522435.1 )

hypothetical protein

NC_003296
(Ralstonia solanacearum GMI1000)

6e-116

18) hrcC
( YP_003749794.1 )

Type III secretion protein

NC_014310
(Ralstonia solanacearum PSI07)

1e-113

• Sequence Alignments

1) hrcC in NC_017271


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  753 bits (2850),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 570/570 (100%), Positives = 570/570 (100%), Gaps = 0/570 (0%)

Query  21   SVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDLSG  80
            SVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDLSG
Sbjct  36   SVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDLSG  95

Query  81   TFGFVWYYDGSVLRIWGANETKNatlslgaastsalRDALARMRLDDPRFPVRYDETAHL  140
            TFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETAHL
Sbjct  96   TFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETAHL  155

Query  141  AVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMA  200
            AVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMA
Sbjct  156  AVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMA  215

Query  201  SLLRNIYGVRgaptaalpgpgaNFGRVQPIgggssntfgnsgqrqsggsgilglPASWFG  260
            SLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFG
Sbjct  216  SLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFG  275

Query  261  AGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDAPVIEAD  320
            AGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDAPVIEAD
Sbjct  276  AGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDAPVIEAD  335

Query  321  PRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRV  380
            PRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRV
Sbjct  336  PRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRV  395

Query  381  DVQTgdgrggqlgydgslsgaaaagaaaplggtltavlgDAGRYLMTRVSALEQTNKAKI  440
            DVQTGDGRGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKI
Sbjct  396  DVQTGDGRGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKI  455

Query  441  VSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRL  500
            VSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRL
Sbjct  456  VSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRL  515

Query  501  DVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRI  560
            DVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRI
Sbjct  516  DVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRI  575

Query  561  PLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  590
            PLVGNLFKHRQQSGSRLQRLFLLTPHIVSP
Sbjct  576  PLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

2) XC_3003 in NC_007086


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  752 bits (2845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 605/605 (100%), Positives = 605/605 (100%), Gaps = 0/605 (0%)

Query  1    MAYACppvhrhrraplaaalllgllpllpphanaaSVPWHSRSFKYVADRKDLKEVLRDL  60
            MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL
Sbjct  1    MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL  60

Query  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNat  120
            SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT
Sbjct  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT  120

Query  121  lslgaastsalRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180
            LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR
Sbjct  121  LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180

Query  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRgaptaalpgpgaNFG  240
            QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG
Sbjct  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG  240

Query  241  RVQPIgggssntfgnsgqrqsggsgilglPASWFGAGSPSERVPVSPPLPGSGNSANAPA  300
            RVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGAGSPSERVPVSPPLPGSGNSANAPA
Sbjct  241  RVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGAGSPSERVPVSPPLPGSGNSANAPA  300

Query  301  SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL  360
            SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL
Sbjct  301  SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL  360

Query  361  DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTgdgrggqlgydgslsgaaaag  420
            DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAG
Sbjct  361  DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAG  420

Query  421  aaaplggtltavlgDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR  480
            AAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR
Sbjct  421  AAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR  480

Query  481  VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI  540
            VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI
Sbjct  481  VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI  540

Query  541  TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP  600
            TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP
Sbjct  541  TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP  600

Query  601  HIVSP  605
            HIVSP
Sbjct  601  HIVSP  605

3) hrcC in NC_003902


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  752 bits (2845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 605/605 (100%), Positives = 605/605 (100%), Gaps = 0/605 (0%)

Query  1    MAYACppvhrhrraplaaalllgllpllpphanaaSVPWHSRSFKYVADRKDLKEVLRDL  60
            MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL
Sbjct  1    MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL  60

Query  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNat  120
            SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT
Sbjct  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT  120

Query  121  lslgaastsalRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180
            LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR
Sbjct  121  LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180

Query  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRgaptaalpgpgaNFG  240
            QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG
Sbjct  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG  240

Query  241  RVQPIgggssntfgnsgqrqsggsgilglPASWFGAGSPSERVPVSPPLPGSGNSANAPA  300
            RVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGAGSPSERVPVSPPLPGSGNSANAPA
Sbjct  241  RVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGAGSPSERVPVSPPLPGSGNSANAPA  300

Query  301  SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL  360
            SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL
Sbjct  301  SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL  360

Query  361  DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTgdgrggqlgydgslsgaaaag  420
            DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAG
Sbjct  361  DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAG  420

Query  421  aaaplggtltavlgDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR  480
            AAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR
Sbjct  421  AAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR  480

Query  481  VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI  540
            VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI
Sbjct  481  VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI  540

Query  541  TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP  600
            TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP
Sbjct  541  TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP  600

Query  601  HIVSP  605
            HIVSP
Sbjct  601  HIVSP  605

4) hrcC in NC_010688


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  752 bits (2845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 605/605 (100%), Positives = 605/605 (100%), Gaps = 0/605 (0%)

Query  1    MAYACppvhrhrraplaaalllgllpllpphanaaSVPWHSRSFKYVADRKDLKEVLRDL  60
            MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL
Sbjct  1    MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL  60

Query  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNat  120
            SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT
Sbjct  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT  120

Query  121  lslgaastsalRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180
            LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR
Sbjct  121  LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180

Query  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRgaptaalpgpgaNFG  240
            QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG
Sbjct  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG  240

Query  241  RVQPIgggssntfgnsgqrqsggsgilglPASWFGAGSPSERVPVSPPLPGSGNSANAPA  300
            RVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGAGSPSERVPVSPPLPGSGNSANAPA
Sbjct  241  RVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGAGSPSERVPVSPPLPGSGNSANAPA  300

Query  301  SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL  360
            SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL
Sbjct  301  SVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQL  360

Query  361  DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTgdgrggqlgydgslsgaaaag  420
            DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAG
Sbjct  361  DNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAG  420

Query  421  aaaplggtltavlgDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR  480
            AAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR
Sbjct  421  AAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR  480

Query  481  VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI  540
            VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI
Sbjct  481  VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEI  540

Query  541  TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP  600
            TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP
Sbjct  541  TTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTP  600

Query  601  HIVSP  605
            HIVSP
Sbjct  601  HIVSP  605

5) hrcC in NC_006834


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  751 bits (2842),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 501/606 (83%), Positives = 573/606 (95%), Gaps = 2/606 (0%)

Query  1    MAPACTTTHRQR-aplfavlllsllplfsPQADAAQVPWHSRTFKYVADNKDLKEVLRDL  59
            MA AC   HR+R APL A LLL+LLPL++P+A+AA VPWHSR+FKYVAD KDLKEVLRDL
Sbjct  1    MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL  60

Query  60   SASQSIATWISPEVTGTLSGKFETSPQKFLDDLAATYGFVWYYDGAMLRIWGANESKSAT  119
            SASQSI+TWISPEVTGTLSGKFE++PQKFLDDL++T+GFVWYYDG++LRIWGANE+K+AT
Sbjct  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT  120

Query  120  LSLGTASTKSLRDALARMRLDDSRFPVRYDEAAHVAVVSGPPGYVDTVSAIAKQVEQGAR  179
            LSLG+AST +LRDALARMRLDD+RFPVRYDE+AH+AVVSGPPGYVDTV+AIAKQVEQ AR
Sbjct  121  LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180

Query  180  QRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSIYGARGASVAPIAAFGANFG  239
            QRDATEVQVFQLHYAQAADHTTRIGGQD+Q+PGMASLLR+IYG RGA+ A++++ GANFG
Sbjct  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG  240

Query  240  RVQPIGGGSSntfgnaaqgqgggasgtlglpsaWFGGASPSDRMPVspplpgsgaaagsp  299
            RVQPIGGGSSNTFGN++Q Q+GG++     +S WFG++SPS+R+PVSPPLPGSG +A +P
Sbjct  241  RVQPIGGGSSNTFGNSGQRQSGGSGILGLPAS-WFGAGSPSERVPVSPPLPGSGNSANAP  299

Query  300  asVWPELSKGRRDESNPIDAGGGAELASDAPVIEADPRTNAILIRDRPERMQSYGTLIQQ  359
            ASVWPE+S++RRD + ++DAG+G+ELASDAPVIEADPRTN+ILIRDRPERM +YGTLIQQ
Sbjct  300  ASVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQ  359

Query  360  LDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQTGDGRGGQLGFNGVLSGAATD  419
            LDNRPKLLQIDATIIEIRDGA+QDLGVDWRFHS++ D+QTGDGRGGQLG++G LSGAA+ 
Sbjct  360  LDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAA  419

Query  420  GATTPVGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQAFV  479
            GA++P+GGTLTAVLGDAGRYLMTRVSALE TNKAKIVS+PQVATLDNVEAVMDHKQQAFV
Sbjct  420  GAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFV  479

Query  480  RVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITSSE  539
            RVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLG+NTVDGIPVITSSE
Sbjct  480  RVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSE  539

Query  540  IKTQAFVNEGQSLLIAGYAYDADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFLLT  599
            I TQAFVNEGQSLLIAGYA D+D+TDLN VPGLS+IPL+GNLFKHRQ+SGSR+QRLFLLT
Sbjct  540  ITTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLT  599

Query  600  PHVVSP  605
            PH+VSP
Sbjct  600  PHIVSP  605

6) XOO_0082 in NC_007705


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  751 bits (2842),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 501/606 (83%), Positives = 573/606 (95%), Gaps = 2/606 (0%)

Query  1    MAPACTTTHRQR-aplfavlllsllplfsPQADAAQVPWHSRTFKYVADNKDLKEVLRDL  59
            MA AC   HR+R APL A LLL+LLPL++P+A+AA VPWHSR+FKYVAD KDLKEVLRDL
Sbjct  1    MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL  60

Query  60   SASQSIATWISPEVTGTLSGKFETSPQKFLDDLAATYGFVWYYDGAMLRIWGANESKSAT  119
            SASQSI+TWISPEVTGTLSGKFE++PQKFLDDL++T+GFVWYYDG++LRIWGANE+K+AT
Sbjct  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT  120

Query  120  LSLGTASTKSLRDALARMRLDDSRFPVRYDEAAHVAVVSGPPGYVDTVSAIAKQVEQGAR  179
            LSLG+AST +LRDALARMRLDD+RFPVRYDE+AH+AVVSGPPGYVDTV+AIAKQVEQ AR
Sbjct  121  LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180

Query  180  QRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSIYGARGASVAPIAAFGANFG  239
            QRDATEVQVFQLHYAQAADHTTRIGGQD+Q+PGMASLLR+IYG RGA+ A++++ GANFG
Sbjct  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG  240

Query  240  RVQPIGGGSSntfgnaaqgqgggasgtlglpsaWFGGASPSDRMPVspplpgsgaaagsp  299
            RVQPIGGGSSNTFGN++Q Q+GG++     +S WFG++SPS+R+PVSPPLPGSG +A +P
Sbjct  241  RVQPIGGGSSNTFGNSGQRQSGGSGILGLPAS-WFGAGSPSERVPVSPPLPGSGNSANAP  299

Query  300  asVWPELSKGRRDESNPIDAGGGAELASDAPVIEADPRTNAILIRDRPERMQSYGTLIQQ  359
            ASVWPE+S++RRD + ++DAG+G+ELASDAPVIEADPRTN+ILIRDRPERM +YGTLIQQ
Sbjct  300  ASVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQ  359

Query  360  LDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQTGDGRGGQLGFNGVLSGAATD  419
            LDNRPKLLQIDATIIEIRDGA+QDLGVDWRFHS++ D+QTGDGRGGQLG++G LSGAA+ 
Sbjct  360  LDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAA  419

Query  420  GATTPVGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQAFV  479
            GA++P+GGTLTAVLGDAGRYLMTRVSALE TNKAKIVS+PQVATLDNVEAVMDHKQQAFV
Sbjct  420  GAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFV  479

Query  480  RVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITSSE  539
            RVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLG+NTVDGIPVITSSE
Sbjct  480  RVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSE  539

Query  540  IKTQAFVNEGQSLLIAGYAYDADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFLLT  599
            I TQAFVNEGQSLLIAGYA D+D+TDLN VPGLS+IPL+GNLFKHRQ+SGSR+QRLFLLT
Sbjct  540  ITTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLT  599

Query  600  PHVVSP  605
            PH+VSP
Sbjct  600  PHIVSP  605

7) hrpA1 in NC_010717


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  748 bits (2831),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 482/576 (84%), Positives = 550/576 (96%), Gaps = 1/576 (0%)

Query  16   QADAAQVPWHSRTFKYVADNKDLKEVLRDLSASQSIATWISPEVTGTLSGKFETSPQKFL  75
            +A+AA VPWHSR+FKYVAD KDLKEVLRDLSASQSI+TWISPEVTGTLSGKFE++PQKFL
Sbjct  31   HANAASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFL  90

Query  76   DDLAATYGFVWYYDGAMLRIWGANESKSATLSLGTASTKSLRDALARMRLDDSRFPVRYD  135
            DDL++T+GFVWYYDG++LRIWGANE+K+ATLSLG+AST +LRDALARMRLDD+RFPVRYD
Sbjct  91   DDLSGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYD  150

Query  136  EAAHVAVVSGPPGYVDTVSAIAKQVEQGARQRDATEVQVFQLHYAQAADHTTRIGGQDVQ  195
            E+AH+AVVSGPPGYVDTV+AIAKQVEQ ARQRDATEVQVFQLHYAQAADHTTRIGGQD+Q
Sbjct  151  ETAHLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQ  210

Query  196  IPGMASLLRSIYGARGASVAPIAAFGANFGRVQPIGGGSSntfgnaaqgqgggasgtlgl  255
            +PGMASLLR+IYG RGA+ A++++ GANFGRVQPIGGGSSNTFGN++Q Q+GG++     
Sbjct  211  VPGMASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLP  270

Query  256  psaWFGGASPSDRMPVspplpgsgaaagspasVWPELSKGRRDESNPIDAGGGAELASDA  315
            +S WFG++SPS+R+PVSPPLPGSG +A +PASVWPE+S++RRD + ++DAG+G+ELASDA
Sbjct  271  AS-WFGAGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDA  329

Query  316  PVIEADPRTNAILIRDRPERMQSYGTLIQQLDNRPKLLQIDATIIEIRDGAMQDLGVDWR  375
            PVIEADPRTN+ILIRDRPERM +YGTLIQQLDNRPKLLQIDATIIEIRDGA+QDLGVDWR
Sbjct  330  PVIEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWR  389

Query  376  FHSQHTDIQTGDGRGGQLGFNGVLSGAATDGATTPVGGTLTAVLGDAGRYLMTRVSALET  435
            FHS++ D+QTGDGRGGQLG++G LSGAA+ GA++P+GGTLTAVLGDAGRYLMTRVSALE 
Sbjct  390  FHSRRVDVQTGDGRGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSALEQ  449

Query  436  TNKAKIVSSPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPGSP  495
            TNKAKIVS+PQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPGSP
Sbjct  450  TNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPGSP  509

Query  496  NGQMRLDVRIEDGQLGSNTVDGIPVITSSEIKTQAFVNEGQSLLIAGYAYDADETDLNAV  555
            NGQMRLDVRIEDGQLG+NTVDGIPVITSSEI TQAFVNEGQSLLIAGYA D+D+TDLN V
Sbjct  510  NGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLNNV  569

Query  556  PGLSKIPLLGNLFKHRQKSGSRMQRLFLLTPHVVSP  591
            PGLS+IPL+GNLFKHRQ+SGSR+QRLFLLTPH+VSP
Sbjct  570  PGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

8) hrcC in NC_017267


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  743 bits (2811),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 476/578 (83%), Positives = 548/578 (95%), Gaps = 3/578 (0%)

Query  30   QADAAQVPWHSRTFKYVADNKDLKEVLRDLSASQSIATWISPEVTGTLSGKFETSPQKFL  89
            +A+AA VPWHSR+FKYVAD KDLKEVLRDLSASQSI+TWISPEVTGTLSGKFE++PQKFL
Sbjct  31   HANAASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFL  90

Query  90   DDLAATYGFVWYYDGAMLRIWGANESKSATLSLGTASTKSLRDALERMRLDDLRFPVRYD  149
            DDL++T+GFVWYYDG++LRIWGANE+K+ATLSLG+AST +LRDAL RMRLDD RFPVRYD
Sbjct  91   DDLSGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYD  150

Query  150  EAAHVAVVSGPPGYVDTVSAIARQVEQGARQRDATEVQVFQLHYAQAADHTTRIGGQDVQ  209
            E+AH+AVVSGPPGYVDTV+AIA+QVEQ ARQRDATEVQVFQLHYAQAADHTTRIGGQD+Q
Sbjct  151  ETAHLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQ  210

Query  210  IPGMASLLRSIYGARGASVAPIASFGANFGRVQPIGGGSSNTFgnaaqgqgggangILGL  269
            +PGMASLLR+IYG RGA+ A++++ GANFGRVQPIGGGSSNTFGN++Q Q+GG+  ILGL
Sbjct  211  VPGMASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSG-ILGL  269

Query  270  PSAWFGGASPSDRvpvspplpgsgaaaaagspasvwpELSKGRRDESNPIDAGGGAELAS  329
            P++WFG++SPS+RVPVSPPLPGSG +A A ++     E+S++RRD + ++DAG+G+ELAS
Sbjct  270  PASWFGAGSPSERVPVSPPLPGSGNSANAPASVWP--EMSQARRDAPLAVDAGSGGELAS  327

Query  330  DAPVIEADPRTNAILIRDRPERMQSYGTLIQELDNRPKLLQIDATIIEIRDGAMQDLGVD  389
            DAPVIEADPRTN+ILIRDRPERM +YGTLIQ+LDNRPKLLQIDATIIEIRDGA+QDLGVD
Sbjct  328  DAPVIEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVD  387

Query  390  WRFHSQHTDIQTGDGRGGQLGFNGVLSGAATDGATTPVGGTLTAVLGDAGRYLMTRVSAL  449
            WRFHS++ D+QTGDGRGGQLG++G LSGAA+ GA++P+GGTLTAVLGDAGRYLMTRVSAL
Sbjct  388  WRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSAL  447

Query  450  ETTNKAKIVSSPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG  509
            E TNKAKIVS+PQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG
Sbjct  448  EQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG  507

Query  510  SPNSQMRLDVRIEDGQLGSNTVDGIPVITSSEIKTQAFVNEGQSLLIAGYAYDADETNLN  569
            SPN+QMRLDVRIEDGQLG+NTVDGIPVITSSEI TQAFVNEGQSLLIAGYA D+D+T+LN
Sbjct  508  SPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLN  567

Query  570  AVPGLSKIPLLGNLFKHRQKNGSRMQRLFLLTPHVVSP  607
             VPGLS+IPL+GNLFKHRQ++GSR+QRLFLLTPH+VSP
Sbjct  568  NVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

9) hrcC in NC_007508


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  718 bits (2716),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 504/608 (83%), Positives = 573/608 (95%), Gaps = 4/608 (0%)

Query  1    MAPACTTAHR-RRaplaavlmlsllpllsphadaaQVPWHSRTFKYVADNKDLKEVLRDL  59
            MA AC   HR RRAPLAA L+L+LLPLL+PHA+AA VPWHSR+FKYVAD KDLKEVLRDL
Sbjct  1    MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL  60

Query  60   SASQSIATWISPEVTGTLSGKFETSPQEFLDDLAATYGFVWYYDGAVLRIWGANESKSAT  119
            SASQSI+TWISPEVTGTLSGKFE++PQ FLDDL++T+GFVWYYDG+VLRIWGANE+K+AT
Sbjct  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT  120

Query  120  LSLGTASTKSLRDALARMRLDDPRFPVRYDEAAHVAVVSGPPGYVDTVSAIAKQVEQGAR  179
            LSLG+AST +LRDALARMRLDDPRFPVRYDE+AH+AVVSGPPGYVDTV+AIAKQVEQ AR
Sbjct  121  LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180

Query  180  QRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSMYgargapvaaipgpgaNFG  239
            QRDATEVQVFQLHYAQAADHTTRIGGQD+Q+PGMASLLR++YG RGAP AA+PGPGANFG
Sbjct  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG  240

Query  240  RVQPIGGGSSNTFgnaaqgqgggasgilglpssWFGGASSSDRvpvspplpgsgaaaaag  299
            RVQPIGGGSSNTFGN++Q Q+GG++ +   +S WFG++S+S+RVPVSPPLPGSG +A A 
Sbjct  241  RVQPIGGGSSNTFGNSGQRQSGGSGILGLPAS-WFGAGSPSERVPVSPPLPGSGNSANAP  299

Query  300  spasvwpELSKGRRDESNPIDAGGGAELASDAPVIEADPRTNAILIRDRPERMQSYGTLI  359
            ++     E+S++RRD + ++DAG+G+ELASDAPVIEADPRTN+ILIRDRPERM +YGTLI
Sbjct  300  ASVWP--EMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLI  357

Query  360  QQLDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQTGDGRGGQLGFNGALSGAA  419
            QQLDNRPKLLQIDATIIEIRDGA+QDLGVDWRFHS++ D+QTGDGRGGQLG++G+LSGAA
Sbjct  358  QQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAA  417

Query  420  TDGATTPVGGTLTAVLGDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQA  479
            + GA++P+GGTLTAVLGDAGRYLMTRVSALE TNKAKIVS+PQVATLDNVEAVMDHKQQA
Sbjct  418  AAGAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQA  477

Query  480  FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITS  539
            FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLG+NTVDGIPVITS
Sbjct  478  FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITS  537

Query  540  SEITTQAFVNEGQSLLIAGYAYDADETDLNAIPGLSKIPLVGNLFKHRQKSGTRMQRLFL  599
            SEITTQAFVNEGQSLLIAGYA D+D+TDLN +PGLS+IPLVGNLFKHRQ+SG+R+QRLFL
Sbjct  538  SEITTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFL  597

Query  600  LTPHVVSP  607
            LTPH+VSP
Sbjct  598  LTPHIVSP  605

10) hrcC in NC_003919


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  706 bits (2670),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 507/608 (84%), Positives = 574/608 (95%), Gaps = 4/608 (0%)

Query  1    MAPACTTVHR-RRaplaavlmlsllpvlspHADAAQVPWHSRTFKYVADNKDLKEVLRDL  59
            MA AC  VHR RRAPLAA L+L+LLP+L+PHA+AA VPWHSR+FKYVAD KDLKEVLRDL
Sbjct  1    MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL  60

Query  60   SASQSIATWISPEVTGTLSGKFETSPQKFLDDLAATYGFVWYYDGAVLRIWGANESKSAT  119
            SASQSI+TWISPEVTGTLSGKFE++PQKFLDDL++T+GFVWYYDG+VLRIWGANE+K+AT
Sbjct  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT  120

Query  120  LSLGTASTKSLRDALARMRLDDPRFPVRYDETAHVAVVSGPPGYVDTVSAIAKQVEQGAR  179
            LSLG+AST +LRDALARMRLDDPRFPVRYDETAH+AVVSGPPGYVDTV+AIAKQVEQ AR
Sbjct  121  LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180

Query  180  QRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSMYgargapvaaipgpgaNFG  239
            QRDATEVQVFQLHYAQAADHTTRIGGQD+Q+PGMASLLR++YG RGAP AA+PGPGANFG
Sbjct  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG  240

Query  240  RVQPIGGGSSNTFgnaaqgqgggasgilglpssWFGGASSSDRVPVSpplpgsgtaatag  299
            RVQPIGGGSSNTF   +  + +G+SGILGLP+SWFG++S+S+RVPVS   P +G++ +A 
Sbjct  241  RVQPIGGGSSNTF-GNSGQRQSGGSGILGLPASWFGAGSPSERVPVS--PPLPGSGNSAN  297

Query  300  spasVWPELSKGRRDESTPIDAGGGAELASDAPVIEADPRTNTILIRDRPERMQSYGTLI  359
            +PASVWPE+S++RRD + ++DAG+G+ELASDAPVIEADPRTN ILIRDRPERM +YGTLI
Sbjct  298  APASVWPEMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLI  357

Query  360  QQLDNRPKLLQIDATIIEIRDGAMQDLGVDWRFHSQHTDIQTgngsggqlgfngALSgaa  419
            QQLDNRPKLLQIDATIIEIRDGA+QDLGVDWRFHS++ D+QTG+G GGQLG++G+LSGAA
Sbjct  358  QQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAA  417

Query  420  tdgattpaggtltavlgDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQA  479
            + GA++P GGTLTAVLGDAGRYLMTRVSALE TNKAKIVS+PQVATLDNVEAVMDHKQQA
Sbjct  418  AAGAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQA  477

Query  480  FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITS  539
            FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLG+NTVDGIPVITS
Sbjct  478  FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITS  537

Query  540  SEITTQAFVNEGQSLLIAGYAYDADETDLNAVPGLSKIPLLGNLFKHRQKSGSRMQRLFL  599
            SEITTQAFVNEGQSLLIAGYA D+D+TDLN VPGLS+IPL+GNLFKHRQ+SGSR+QRLFL
Sbjct  538  SEITTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFL  597

Query  600  LTPHVVSP  607
            LTPH+VSP
Sbjct  598  LTPHIVSP  605

11) XAC29_02125 in NC_020800


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  701 bits (2653),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 486/578 (85%), Positives = 549/578 (95%), Gaps = 3/578 (0%)

Query  16   HADAAQVPWHSRTFKYVADNKDLKEVLRDLSASQSIATWISPEVTGTLSGKFETSPQKFL  75
            HA+AA VPWHSR+FKYVAD KDLKEVLRDLSASQSI+TWISPEVTGTLSGKFE++PQKFL
Sbjct  31   HANAASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFL  90

Query  76   DDLAATYGFVWYYDGAVLRIWGANESKSATLSLGTASTKSLRDALARMRLDDPRFPVRYD  135
            DDL++T+GFVWYYDG+VLRIWGANE+K+ATLSLG+AST +LRDALARMRLDDPRFPVRYD
Sbjct  91   DDLSGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYD  150

Query  136  ETAHVAVVSGPPGYVDTVSAIAKQVEQGARQRDATEVQVFQLHYAQAADHTTRIGGQDVQ  195
            ETAH+AVVSGPPGYVDTV+AIAKQVEQ ARQRDATEVQVFQLHYAQAADHTTRIGGQD+Q
Sbjct  151  ETAHLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQ  210

Query  196  IPGMASLLRSMYgargapvaaipgpgaNFGRVQPIGGGSSNTFgnaaqgqgggasgilgl  255
            +PGMASLLR++YG RGAP AA+PGPGANFGRVQPIGGGSSNTF   +  + +G+SGILGL
Sbjct  211  VPGMASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTF-GNSGQRQSGGSGILGL  269

Query  256  pssWFGGASSSDRVPVSpplpgsgtaatagspasVWPELSKGRRDESTPIDAGGGAELAS  315
            P+SWFG++S+S+RVPVS   P +G++ +A +PASVWPE+S++RRD + ++DAG+G+ELAS
Sbjct  270  PASWFGAGSPSERVPVS--PPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELAS  327

Query  316  DAPVIEADPRTNTILIRDRPERMQSYGTLIQQLDNRPKLLQIDATIIEIRDGAMQDLGVD  375
            DAPVIEADPRTN ILIRDRPERM +YGTLIQQLDNRPKLLQIDATIIEIRDGA+QDLGVD
Sbjct  328  DAPVIEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVD  387

Query  376  WRFHSQHTDIQTgngsggqlgfngALSgaatdgattpaggtltavlgDAGRYLMTRVSAL  435
            WRFHS++ D+QTG+G GGQLG++G+LSGAA+ GA++P GGTLTAVLGDAGRYLMTRVSAL
Sbjct  388  WRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSAL  447

Query  436  ETTNKAKIVSSPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG  495
            E TNKAKIVS+PQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG
Sbjct  448  EQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG  507

Query  496  SPNGQMRLDVRIEDGQLGSNTVDGIPVITSSEITTQAFVNEGQSLLIAGYAYDADETDLN  555
            SPNGQMRLDVRIEDGQLG+NTVDGIPVITSSEITTQAFVNEGQSLLIAGYA D+D+TDLN
Sbjct  508  SPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLN  567

Query  556  AVPGLSKIPLLGNLFKHRQKSGSRMQRLFLLTPHVVSP  593
             VPGLS+IPL+GNLFKHRQ+SGSR+QRLFLLTPH+VSP
Sbjct  568  NVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

12) hrcC in NC_020815


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  701 bits (2651),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 486/578 (85%), Positives = 549/578 (95%), Gaps = 3/578 (0%)

Query  11   HADAAQVPWHSRTFKYVADNKDLKEVLRDLSASQSIATWISPEVTGTLSGKFETSPQKFL  70
            HA+AA VPWHSR+FKYVAD KDLKEVLRDLSASQSI+TWISPEVTGTLSGKFE++PQKFL
Sbjct  31   HANAASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFL  90

Query  71   DDLAATYGFVWYYDGAVLRIWGANESKSATLSLGTASTKSLRDALARMRLDDPRFPVRYD  130
            DDL++T+GFVWYYDG+VLRIWGANE+K+ATLSLG+AST +LRDALARMRLDDPRFPVRYD
Sbjct  91   DDLSGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYD  150

Query  131  ETAHVAVVSGPPGYVDTVSAIAKQVEQGARQRDATEVQVFQLHYAQAADHTTRIGGQDVQ  190
            ETAH+AVVSGPPGYVDTV+AIAKQVEQ ARQRDATEVQVFQLHYAQAADHTTRIGGQD+Q
Sbjct  151  ETAHLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQ  210

Query  191  IPGMASLLRSMYgargapvaaipgpgaNFGRVQPIGGGSSNTFgnaaqgqgggasgilgl  250
            +PGMASLLR++YG RGAP AA+PGPGANFGRVQPIGGGSSNTF   +  + +G+SGILGL
Sbjct  211  VPGMASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTF-GNSGQRQSGGSGILGL  269

Query  251  pssWFGGASSSDRVPVSpplpgsgtaatagspasVWPELSKGRRDESTPIDAGGGAELAS  310
            P+SWFG++S+S+RVPVS   P +G++ +A +PASVWPE+S++RRD + ++DAG+G+ELAS
Sbjct  270  PASWFGAGSPSERVPVS--PPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELAS  327

Query  311  DAPVIEADPRTNTILIRDRPERMQSYGTLIQQLDNRPKLLQIDATIIEIRDGAMQDLGVD  370
            DAPVIEADPRTN ILIRDRPERM +YGTLIQQLDNRPKLLQIDATIIEIRDGA+QDLGVD
Sbjct  328  DAPVIEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVD  387

Query  371  WRFHSQHTDIQTgngsggqlgfngALSgaatdgattpaggtltavlgDAGRYLMTRVSAL  430
            WRFHS++ D+QTG+G GGQLG++G+LSGAA+ GA++P GGTLTAVLGDAGRYLMTRVSAL
Sbjct  388  WRFHSRRVDVQTGDGRGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSAL  447

Query  431  ETTNKAKIVSSPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG  490
            E TNKAKIVS+PQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG
Sbjct  448  EQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG  507

Query  491  SPNGQMRLDVRIEDGQLGSNTVDGIPVITSSEITTQAFVNEGQSLLIAGYAYDADETDLN  550
            SPNGQMRLDVRIEDGQLG+NTVDGIPVITSSEITTQAFVNEGQSLLIAGYA D+D+TDLN
Sbjct  508  SPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLN  567

Query  551  AVPGLSKIPLLGNLFKHRQKSGSRMQRLFLLTPHVVSP  588
             VPGLS+IPL+GNLFKHRQ+SGSR+QRLFLLTPH+VSP
Sbjct  568  NVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

13) hrcC in NC_016010


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  700 bits (2648),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 502/608 (83%), Positives = 571/608 (94%), Gaps = 4/608 (0%)

Query  1    MAPACTTAHR-RRaplaavlmlsllpllsphadaaQVPWHSRTFKYVADNKDLKEVLRDL  59
            MA AC   HR RRAPLAA L+L+LLPLL+PHA+AA VPWHSR+FKYVAD KDLKEVLRDL
Sbjct  1    MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDL  60

Query  60   SASQSIATWISPEVTGTLSGKFETSPQKFLDDLAATYGFVWYYDGAVLRIWGANESKSAT  119
            SASQSI+TWISPEVTGTLSGKFE++PQKFLDDL++T+GFVWYYDG+VLRIWGANE+K+AT
Sbjct  61   SASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNAT  120

Query  120  LSLGTASTKSLRDALARMRLDDPRFPVRYDEAAHVAVVSGPPGYVDTVSAIAKQVEQGAR  179
            LSLG+AST +LRDALARMRLDDPRFPVRYDE+AH+AVVSGPPGYVDTV+AIAKQVEQ AR
Sbjct  121  LSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSGPPGYVDTVAAIAKQVEQVAR  180

Query  180  QRDATEVQVFQLHYAQAADHTTRIGGQDVQIPGMASLLRSMYgargapvaaipgpgaNFG  239
            QRDATEVQVFQLHYAQAADHTTRIGGQD+Q+PGMASLLR++YG RGAP AA+PGPGANFG
Sbjct  181  QRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG  240

Query  240  RVQPIGGGSSNTFgnaaqgqgggasgilglpssWFGGASSSDRvpvspplpgsgaaaaag  299
            RVQPIGGGSSNTFGN++Q Q+GG++ +   +S WFG++S+S+RVPVSPPLPGSG +A A 
Sbjct  241  RVQPIGGGSSNTFGNSGQRQSGGSGILGLPAS-WFGAGSPSERVPVSPPLPGSGNSANAP  299

Query  300  spasvwpELSKARRDESNPIDVGGGAELASDAPVIEADPRTNAILIRDRPERMQSYGTLI  359
            ++     E+S+ARRD + ++D G+G+ELASDAPVIEADPRTN+ILIRDRPERM +YGTLI
Sbjct  300  ASVWP--EMSQARRDAPLAVDAGSGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLI  357

Query  360  QQLDNRPKLLQIDATIIEVRDGAMQDLGVDWRFHSQHTDIQTGNGSGSQLGFNGALSgaa  419
            QQLDNRPKLLQIDATIIE+RDGA+QDLGVDWRFHS++ D+QTG+G G+QLG++G+LSGAA
Sbjct  358  QQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTGDGRGGQLGYDGSLSGAA  417

Query  420  tdgattpaggtltavlgDAGRYLMTRVSALETTNKAKIVSSPQVATLDNVEAVMDHKQQA  479
            + GA++P GGTLTAVLGDAGRYLMTRVSALE TNKAKIVS+PQVATLDNVEAVMDHKQQA
Sbjct  418  AAGAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQA  477

Query  480  FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGSNTVDGIPVITS  539
            FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLG+NTVDGIPVITS
Sbjct  478  FVRVSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITS  537

Query  540  SEITTQAFVNEGQSLLIAGYAYDADETDLNAVPGLSKIPLVGNLFKHRQKSGTRMQRLFL  599
            SEITTQAFVNEGQSLLIAGYA D+D+TDLN VPGLS+IPLVGNLFKHRQ+SG+R+QRLFL
Sbjct  538  SEITTQAFVNEGQSLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFL  597

Query  600  LTPHVVSP  607
            LTPH+VSP
Sbjct  598  LTPHIVSP  605

14) hrcC in NC_015856


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  438 bits (1649),  Expect = 6e-124, Method: Compositional matrix adjust.
 Identities = 277/584 (48%), Positives = 431/584 (74%), Gaps = 30/584 (5%)

Query  103  AGAQPLVWKSQRFQYVADHKDLKDVLRDFGASENIMTSISSHVEGSVSGRFESSPEQFLD  162
            A A ++ W S+ F+YVAD+KDLK+VLRD++AS++I T IS++V G++SG+FE++P++FLD
Sbjct  32   ANAASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLD  91

Query  163  KMANTFGFIWYYDGAVLSIAGANEARNATISLRRSNVAELRRVLASLGIADRRFPIRYDG  222
             ++ TFGF+WYYDG+VL I GANE++NAT+SL  ++ + LR  LA + + D RFP+RYD 
Sbjct  92   DLSGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDE  151

Query  223  ETGLVIASGPPRYVELVSDVARLIDQTSAPSDKVVVQRFPLSYAWATDRTVTIDGQGVTV  282
             + L + SGPP YV+ V+ +A+ ++Q +   D   VQ F L YA A+D+T  I+GQ++ V
Sbjct  152  TAHLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQV  211

Query  283  RGVASLLRGLYAANGGSQAA--------GDAAP---APRDTYRMKSLRntgnnagnsggn  331
             G+ASLLR +Y+  G++ AA        G   P   ++ +T+   + R++G ++  +   
Sbjct  212  PGMASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLPA  271

Query  332  a--fapgangRPPV-PSLPGLSADNSRQAAADLPPLPGGRADAG-TVERGA----ASAGP  383
            +   A +++ R PV P+LPG S++++  +A+  P ++ +R DA  +V+ G+    AS +P
Sbjct  272  SWFGAGSPSERVPVSPPLPG-SGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDAP  330

Query  384  VIEADPRSNAIFVRDRAENMPAFQALIESLDQRPGVLEIDATIIEITDNALKELGVDWRL  443
            VIEADPR+N+I++RDR+E M+A+ +LI+ LD+RP +L+IDATIIEI D AL++LGVDWR+
Sbjct  331  VIEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRF  390

Query  444  HSGHMDVQTGNGALAQAGNPDSLNPQGFGNPANQTNSGPILSTPAGGVLTAVIGGAGRYL  503
            HS ++DVQTG+G  +Q G           + +    +++  ++P GG LTAV+G+AGRYL
Sbjct  391  HSRRVDVQTGDGRGGQLGY----------DGSLSGAAAAGAAAPLGGTLTAVLGDAGRYL  440

Query  504  LGRVSALQQSDQARVTASPKVETLDNVEAIMDNKQTFYVPVSGYQSADLYSVSAGVSLRV  563
            + RVSAL+Q+++A++ ++P+V TLDNVEA+MD+KQ  +V VSGY SADLY++SAGVSLRV
Sbjct  441  MTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRV  500

Query  564  LPMIVPTSSTEQIHLNVHIEDGQLSTQQVGALPIVSNSTIDTQALINNGESLLIAGYSVD  623
            LP +VP S+  Q++L+V+IEDGQL+++ V+++P++++S I TQA++N+G+SLLIAGY+ D
Sbjct  501  LPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASD  560

Query  624  QDDHAETAVPGLSKIPLIGGLFRFKHHQGQRFQRLFLLTPRIIA  667
             D+     VPGLS+IPL+G LF+ +++ G R+QRLFLLTP+I++
Sbjct  561  TDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVS  604

15) hrcC in NC_017575


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  421 bits (1586),  Expect = 5e-119, Method: Compositional matrix adjust.
 Identities = 269/580 (47%), Positives = 424/580 (74%), Gaps = 35/580 (6%)

Query  15   AAPIPWQSQKFEYVADRKDVKEVLRDLGASQHVMTSISTQVEGSVTGSFNESPQKFLDRM  74
            AA++PW+S+ F YVADRKD+KEVLRDL+ASQ + T IS +V G+++G F+ +PQKFLD +
Sbjct  34   AASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDL  93

Query  75   AGTFGFAWYYDGAVLRVTSANEAQSATIALNRASTAQVKRALTRMGIADPRFPIQYDDDS  134
            +GTFGF WYYDG+VLR+ +ANE+++AT++L  AST+ ++ AL+RM + DPRFP++YD+ +
Sbjct  94   SGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETA  153

Query  135  GSIVVSGPPRLVELVRDLAQVIDRGREDANRTVVRAFPLRYAWATDHRVTVNGQSVNIRG  194
               VVSGPP  V+ V  +A+ +++   + + T V+ F L+YA A+DH   + GQ +++ G
Sbjct  154  HLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPG  213

Query  195  VASILNSMYGGDGASDNP-TVPRMQDRRLDSVAPGEANA-GRGGTRALSSVGGKSPLPPG  252
            +AS+L ++YG  GA+  +   P  +  R+++++ G +N+ G +G R  S+ +G   LP++
Sbjct  214  MASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQ-SGGSGILGLPAS  272

Query  253  --GVGQYAGNNTPYAPPPSGD-------TRLRADELDDR----------------SGTPI  287
              G G  +++  P +PP +G        + ++++  + R                S++P+
Sbjct  273  WFGAGS-PSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDAPV  331

Query  288  IRADPRSNSVLVRDRADRMAAHQSLIESLDSRPAVLEISASIIDITETALEQLGVDWRLH  347
            I ADPR+N++L+RDR++RMAA  +LI+ LD+RP +L+I A+II+I + AL++LGVDWR+H
Sbjct  332  IEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFH  391

Query  348  NSRFDLQTGNGANTMLNNPGSLDSVattagaaaaiaatpaggVLSAVIGGGSRYLMARIS  407
            + R D+QTG+G        G L+  ++ +GAAAA AA+P GG L+AV+G+++RYLM+R+S
Sbjct  392  SRRVDVQTGDG------RGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVS  445

Query  408  ALQQTNQARITASPKVATLDNTEAVMDNRQNFYVPVAGYQSADLYAISAGVSLRVLPMVV  467
            AL+QTN+A+I ++P+VATLDN EAVMD++Q+ +V V+GY SADLY +SAGVSLRVLP VV
Sbjct  446  ALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVV  505

Query  468  MDGGTVRIRMNVHIEDGQITSQQVGNLPVTSQSEIDTQALINEGESLLIAGYSVDQQAKT  527
             ++   ++R++V+IEDGQ+ ++ V+ +PV + SEI TQA++NEG+SLLIAGY+ D +   
Sbjct  506  PGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTD  565

Query  528  VDAIPGLSKIPLVGALFRTDQTTGQRFQRMFLVTPRVITP  567
            ++ +PGLS+IPLVG LF+  Q +G R+QR+FL+TP++++P
Sbjct  566  LNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

16) F504_4344 in NC_021745


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  412 bits (1549),  Expect = 4e-116, Method: Compositional matrix adjust.
 Identities = 264/578 (46%), Positives = 422/578 (74%), Gaps = 30/578 (5%)

Query  15   AAPIPWQSQKFEYVADRKDIKEVLRDLGASQHVMTSISTQVEGSVTGSFNETPQKFLDRM  74
            AA++PW+S+ F YVADRKD+KEVLRDL+ASQ + T IS +V G+++G F+ TPQKFLD +
Sbjct  34   AASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDL  93

Query  75   AGTFGFAWYYDGAVLRVTSANEAQSATIALTRASTAQVKRALTRMGIADSRFPIQYDDDS  134
            +GTFGF WYYDG+VLR+ +ANE+++AT++L  AST+ ++ AL+RM + D+RFP++YD+ +
Sbjct  94   SGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETA  153

Query  135  GSIVVSGPPRLVELVRDIAQVIDRGREDANRTVVRAFPLRYAWATDHRVTVNGQSVNIRG  194
               VVSGPP  V+ V  IA+ +++   + + T V+ F L+YA A+DH   + GQ +++ G
Sbjct  154  HLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPG  213

Query  195  VASILNSMYGGDGPSDSG-TAPRAQDRRLDSVAPGEANA-GRAGTRAlsslgggksplp-  251
            +AS+L ++YG  G++ ++  +P A+  R+++++ G +N+ G +G R  ++ G    P + 
Sbjct  214  MASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLPASW  273

Query  252  --pggtgQYVGNSGPYAPPPSGEN---RLRSDELDDRGSTPI----------------IR  290
              +G+ ++ V  S P + + ++ N    ++++  + R  +P+                I 
Sbjct  274  FGAGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDAPVIE  333

Query  291  ADPRSNSVLVRDRADRMAAHQSLIESLDSRPAVLEISASIIDISENALEQLGVDWRLHNS  350
            ADPR+N++L+RDR++RMAA  +LI+ LD+RP +L+I A+II+I + AL++LGVDWR+H+ 
Sbjct  334  ADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSR  393

Query  351  RFDLQTGNGTNTMLNNPGSLDSVattagaaaaiaatpaggVLSAVIGGGSRYLMARISAL  410
            R D+QTG+G        G L+  ++ +GAAAA AA+P GG L+AV+G+++RYLM+R+SAL
Sbjct  394  RVDVQTGDGRG------GQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSAL  447

Query  411  QQTDQARITANPKVATLDNTEAVMDNRQNFYVPVAGYQSADLYAISAGVSLRVLPMVVMD  470
            +QT++A+I + P+VATLDN EAVMD++Q+ +V V+GY SADLY +SAGVSLRVLP VV +
Sbjct  448  EQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG  507

Query  471  GGTVRIRMNVHIEDGQITSQQVGNLPITSQSEIDTQALINEGDSLLIAGYSVEQQSKSVD  530
            +   ++R++V+IEDGQ+ ++ V+ +P+ + SEI TQA++NEG+SLLIAGY+ + +   ++
Sbjct  508  SPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLN  567

Query  531  AVPGLSKIPLVGALFRTDQTTGKRFQRMFLVTPRVITP  568
             VPGLS+IPLVG LF+  Q +G R+QR+FL+TP++++P
Sbjct  568  NVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

17) hrcC in NC_003296


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  411 bits (1547),  Expect = 6e-116, Method: Compositional matrix adjust.
 Identities = 263/578 (46%), Positives = 422/578 (74%), Gaps = 30/578 (5%)

Query  15   AAPIPWQSQKFEYVADRKDIKEVLRDLGASQHVMTSISTQVEGSVTGSFNETPQKFLDRM  74
            AA++PW+S+ F YVADRKD+KEVLRDL+ASQ + T IS +V G+++G F+ TPQKFLD +
Sbjct  34   AASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDL  93

Query  75   AGTFGFAWYYDGAVLRVTSANEAQSATIALTRASTAQVKRALTRMGIADSRFPIQYDDDS  134
            +GTFGF WYYDG+VLR+ +ANE+++AT++L  AST+ ++ AL+RM + D+RFP++YD+ +
Sbjct  94   SGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETA  153

Query  135  GSIVVSGPPRLVELVRDIAQVIDRGREDANRTVVRAFPLRYAWATDHRVTVNGQSVNIRG  194
               VVSGPP  V+ V  IA+ +++   + + T V+ F L+YA A+DH   + GQ +++ G
Sbjct  154  HLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPG  213

Query  195  VASILNSMYGGDGPSDSG-TAPRAQDRRLDSVAPGEASA-GRAGTRAlsslgggksplp-  251
            +AS+L ++YG  G++ ++  +P A+  R+++++ G +++ G +G R  ++ G    P + 
Sbjct  214  MASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLPASW  273

Query  252  --pggtgQYVGNSGPYAPPPSGEN---RLRSDELDDRGSTPI----------------IR  290
              +G+ ++ V  S P + + ++ N    ++++  + R  +P+                I 
Sbjct  274  FGAGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDAPVIE  333

Query  291  ADPRSNSVLVRDRADRMAAHQSLIESLDSRPAVLEISASIIDISENALEQLGVDWRLHNS  350
            ADPR+N++L+RDR++RMAA  +LI+ LD+RP +L+I A+II+I + AL++LGVDWR+H+ 
Sbjct  334  ADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSR  393

Query  351  RFDLQTGNGTNTMLNNPGSLDSVattagaaaaiaatpaggVLSAVIGGGSRYLMARISAL  410
            R D+QTG+G        G L+  ++ +GAAAA AA+P GG L+AV+G+++RYLM+R+SAL
Sbjct  394  RVDVQTGDGRG------GQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSAL  447

Query  411  QQTDQARITANPKVATLDNTEAVMDNRQNFYVPVAGYQSADLYAISAGVSLRVLPMVVMD  470
            +QT++A+I + P+VATLDN EAVMD++Q+ +V V+GY SADLY +SAGVSLRVLP VV +
Sbjct  448  EQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVPG  507

Query  471  GGTVRIRMNVHIEDGQITSQQVGNLPITSQSEIDTQALINEGDSLLIAGYSVEQQSKSVD  530
            +   ++R++V+IEDGQ+ ++ V+ +P+ + SEI TQA++NEG+SLLIAGY+ + +   ++
Sbjct  508  SPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDLN  567

Query  531  AVPGLSKIPLVGALFRTDQTTGKRFQRMFLVTPRVITP  568
             VPGLS+IPLVG LF+  Q +G R+QR+FL+TP++++P
Sbjct  568  NVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

18) hrcC in NC_014310


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  403 bits (1517),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 275/579 (48%), Positives = 421/579 (73%), Gaps = 32/579 (5%)

Query  37   AAPVPWQSQKFEYVADRKDIKEVLRDLGASQHVMTSISTQVEGSVTGSFNESPQKFLDRM  96
            AA+VPW+S+ F YVADRKD+KEVLRDL+ASQ + T IS +V G+++G F+ +PQKFLD +
Sbjct  34   AASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDL  93

Query  97   AGTFGFAWYYDGAVLRVTGANEAQSATIALNRASTAQVKRALTRMGITDPRFPVQYDDDS  156
            +GTFGF WYYDG+VLR+ GANE+++AT++L  AST+ ++ AL+RM + DPRFPV+YD+ +
Sbjct  94   SGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETA  153

Query  157  GSIVVSGPPRLVELVRDIAQVIDRGREDANRTVVRAFPLRYAWATDHKVTVNGQSVNIRG  216
               VVSGPP  V+ V  IA+ +++   + + T V+ F L+YA A+DH   + GQ +++ G
Sbjct  154  HLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPG  213

Query  217  VASILNSMYGGDG-PSDSATAPRAQDRRLDSVAPGEANA-GRGGTRAlsslg--------  266
            +AS+L ++YG  G P+ +  +P A+  R+++++ G +N+ G +G R  ++ G        
Sbjct  214  MASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLPASW  273

Query  267  --ggksplppggvgQYAGSNAAYAPPPS-----GDSRMRADELD-DRGS-------APII  311
              +G ++         +GS  +  +P+S     +++R R   L  D GS       AP+I
Sbjct  274  FGAGSPSERVPVSPPLPGSGNSANAPASVWPEMSQAR-RDAPLAVDAGSGGELASDAPVI  332

Query  312  RADSRSNSVLVRDRADRMAAHQSLIESLDSRPAVLeisasiieiseTALEQLGVDWRLHN  371
             AD+R+N++L+RDR++RMAA  +LI+ LD+RP +L+I A+IIEI + AL++LGVDWR+H+
Sbjct  333  EADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHS  392

Query  372  SRFDLQTGNSANTMLNNPGSLDSVattagaaaaiaatpaggVLSAVIGGSSRYLMARISA  431
             R D+QTG++        G L+  ++ +GAAAA AA+P GG L+AV+G+++RYLM+R+SA
Sbjct  393  RRVDVQTGDG------RGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSA  446

Query  432  LQQTNQARITANPKVATLDNTEAVMDNRQNFYVPVAGYQSADLYAISAGVSLRVLPMVVM  491
            L+QTN+A+I + P+VATLDN EAVMD++Q+ +V V+GY SADLY +SAGVSLRVLP VV 
Sbjct  447  LEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLPSVVP  506

Query  492  DGGTVRIRMNVHIEDGQITSQQVGNLPVTSQSEIDTQALINEGESLLIAGYSVDQQAKTV  551
            ++   ++R++V+IEDGQ+ ++ V+ +PV + SEI TQA++NEG+SLLIAGY+ D +   +
Sbjct  507  GSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTDQTDL  566

Query  552  DAVPGLSKIPLVGALFRTDQTTGQRFQRMFLVTPRVITP  590
            + VPGLS+IPLVG LF+  Q +G R+QR+FL+TP++++P
Sbjct  567  NNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

19) bgla_2g02870 in NC_015376


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  361 bits (1355),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 247/583 (43%), Positives = 415/583 (72%), Gaps = 25/583 (4%)

Query  26   AAPVRWRSATVHVQLDGKDLKDVLRDFaasqgiaasiaqNVTGTVTGRFDLSPQRFLDTL  85
            AA+V W+S +     D KDLK+VLRD++ASQ+I++ I+ +VTGT++G+F+ +PQ+FLD L
Sbjct  34   AASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDL  93

Query  86   ASTFGFVWFYDGNVLSISSSNDVTRQVLQLDHSEIGQLRSTLKQIGLDDPRFPLTYDSAS  145
            ++TFGFVW+YDG+VL I ++N+     L L+ +  + LR +L ++ LDDPRFP+ YD ++
Sbjct  94   SGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETA  153

Query  146  GTVLASGPAQYVQMIADIAQRLDASSGRRNGSVIRIYKLKNAWATDHEVQVDGNKVAVPG  205
               + SGP+ YV+ +A IA++++  + +R+++ +++++L  A A+DH  +++G+ + VPG
Sbjct  154  HLAVVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPG  213

Query  206  VATILGNMYSVKsgstggqpsstpNMQRVQSLNDVsgssngmgggggvqppp--------  257
            +A++L N+Y+V++++T++ P++ +N  RVQ++ + S+++ G +G      +         
Sbjct  214  MASLLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLPASW  273

Query  258  -lppsmmgsQSVGQAGQAFGGAYDNNSgggytrrrgaaaNDVAVTDGSDG-----LPVIQ  311
              + S     +V+ +  + G + +  ++      ++     +AV  GS+G      PVI+
Sbjct  274  FGAGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDAPVIE  333

Query  312  PDPITNSVLIRDTPDRVGQYGELIRQLDVRPQIVEIQAHIIEIDDDTLQQIGVDWRAHNS  371
            +DP TN++LIRD P+R++ YG LI+QLD RP++++I+A IIEI D++LQ++GVDWR H+ 
Sbjct  334  ADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSR  393

Query  372  HVDFQTGNAQQAQNSFDGGQLNPLFGTVQQAGPGNTIVNATPggaalsavvggagRYLMA  431
            +VD QTG+++ +Q ++D              + + +   A+P G++L+AV+G+AGRYLM+
Sbjct  394  RVDVQTGDGRGGQLGYD-----------GSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMT  442

Query  432  RVSALQSTNKTKIDASPLVATLDNVEATMDNTTRFFVKVAGYTSADLYSVSTGVSLRVLP  491
            RVSAL+ TNK+KI ++P VATLDNVEA MD+  + FV+V+GY+SADLY++S+GVSLRVLP
Sbjct  443  RVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLYNLSAGVSLRVLP  502

Query  492  LIVRDQDKTRIKLNVHIEDGQLTQQKVDDIPVITTSQINTQAFVGLGESLLIAGFTTDTQ  551
             +V +  + +++L+V+IEDGQL  + VD+IPVIT+S+I TQAFV  G+SLLIAG+++DT+
Sbjct  503  SVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASDTD  562

Query  552  TNGVTGVPFLSRIPLLGALFRYHSDDHSHGERVFLLTPRIIDA  594
              ++  VP LSRIPL+G LF+ + +  S+ +R+FLLTP+I+ +
Sbjct  563  QTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP  605

20) BC1003_3629 in NC_014540


> NC_007086_P1|3|G3|66769309|YP_244071.1|Xanthomonas_campestris_pv._campestris_str._8004|-|1395..3212|-|XC_3003|HrcC 
protein
Length=605

 Score =  355 bits (1335),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 250/593 (43%), Positives = 411/593 (70%), Gaps = 43/593 (7%)

Query  33   IHWRSSVVHVSAEGQDVKDVLRDFTAGQGVPTTISGDVHGSVSGRFDMPPQRFLDTLASS  92
            + W+S      A+ +D+K+VLRD++A+Q++ T IS +V G++SG+F+  PQ+FLD L+++
Sbjct  37   VPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSGKFEATPQKFLDDLSGT  96

Query  93   FGFVWFYDGSVLSISDVNTVTRRVIKLDHASAADLRSALTQLRIENARFPITYDETQGTA  152
            FGFVW+YDGSVL I + N      + L+ AS++ LR AL+++R++++RFP+ YDET   A
Sbjct  97   FGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETAHLA  156

Query  153  LVSGPQAYVQLVSEVARRLDDNAAQRSGSMIRVFQLHHAWAADH-------NVEIDGKTV  205
            +VSGP +YV+ V+ +A+++++ A QR ++ ++VFQLH A AADH       ++++ G + 
Sbjct  157  VVSGPPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMAS  216

Query  206  TVSGV-------ANVL---SAMYHPRDQRGRNGADSYEQAANRAAREPTMRRLQPMRDVT  255
             +  +       +  L   +A +   +  G  +++++ ++++R +  + +  L + +  +
Sbjct  217  LLRNIYGVRGAPTAALPGPGANFGRVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGA  276

Query  256  GSTDGGGYQSGVNPPLPAGIAANGGVAPgiggllngmaagggpgmqsigssssgdgdsaa  315
            GS      +  V+PPLP+  ++N++ AP+      + A  ++P     GS++   +D+  
Sbjct  277  GSPSE---RVPVSPPLPG--SGNSANAPASVWPEMSQARRDAPLAVDAGSGGELASDA--  329

Query  316  dtsvsgsQTLPVIEADPRTNSVLIRDVPQRLAQYQSLIDKLDVRPRLieieahiieiDDN  375
                      PVIEADPRTN++LIRD P+R+A Y +LI++LD RP+L++I+A IIEI D 
Sbjct  330  ----------PVIEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDG  379

Query  376  ALKQIGVDWRAHNSHIDIqtgngttqqngyngnIDPIFGTQTLADGTTVINTTPVGGSLT  435
            AL+++GVDWR H+ ++D+QTG+G   Q G        ++    +++++   ++P+GG+LT
Sbjct  380  ALQDLGVDWRFHSRRVDVQTGDGRGGQLG--------YDGSL-SGAAAAGAAAPLGGTLT  430

Query  436  AVLGNAGRYLLARVNALQQSNLAKIDASPKVATLNNVEAVMDQKTRFFVRVSGYTSADLY  495
            AVLG+AGRYL++RV+AL+Q+N AKI ++P+VATL+NVEAVMD+K + FVRVSGY+SADLY
Sbjct  431  AVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVRVSGYASADLY  490

Query  496  SVSTGVSLRVLPLVVEENGRTDIKLNVHIEDGAITSQQVDNIPVITTSTINTESFVGQGE  555
            ++S+GVSLRVLP VV  +   +++L+V+IEDG + ++ VD IPVIT+S I T++FV +G+
Sbjct  491  NLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQ  550

Query  556  SLLIAGYRVDTSTNGETGVPGLSKIPLIGALFRYRDDQRSHMERLFLLSPRII  608
            SLLIAGY  DT   +   VPGLS+IPL+G LF+ R++  S+++RLFLL+P+I+
Sbjct  551  SLLIAGYASDTDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIV  603