Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
putative lambdoid prophage protein |
NC_011751 (Escherichia coli UMN026) |
5e-27 |
100 |
|
DnaK suppressor protein |
NC_005810 (Yersinia pestis 91001) |
5e-27 |
100 |
|
hypothetical protein |
NC_008150 (Yersinia pestis Antiqua) |
5e-27 |
100 |
|
hypothetical protein |
NC_004088 (Yersinia pestis KIM) |
5e-27 |
100 |
|
hypothetical protein |
NC_009381 (Yersinia pestis Pestoides F) |
5e-27 |
100 |
|
hypothetical protein |
NC_006155 (Yersinia pseudotuberculosis IP 32953) |
5e-27 |
100 |
|
TraR/DksA family transcriptional regulator |
NC_010634 (Yersinia pseudotuberculosis PB1/+) |
5e-27 |
100 |
|
putative lambdoid prophage protein from the DksA/TraR family with a zinc finger |
NC_011745 (Escherichia coli ED1a) |
2e-26 |
99 |
|
conjugal transfer protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
8e-21 |
74 |
|
C4-type zinc finger protein, DksA/TraR family |
NC_017845 (Pectobacterium sp. SCC3193) |
2e-20 |
73 |
|
TraR/DksA family transcriptional regulator |
NC_013592 (Dickeya dadantii Ech586) |
3e-20 |
72 |
|
TraR/DksA family transcriptional regulator |
NC_013421 (Pectobacterium wasabiae WPP163) |
4e-20 |
72 |
|
TraR/DksA family transcriptional regulator |
NC_012912 (Dickeya zeae Ech1591) |
8e-20 |
70 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_017047 (Rahnella aquatilis HX2) |
1e-19 |
74 |
|
TraR/DksA family transcriptional regulator |
NC_013592 (Dickeya dadantii Ech586) |
2e-19 |
72 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
3e-19 |
73 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_016818 (Rahnella aquatilis CIP 78.65) |
9e-19 |
72 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_011283 (Klebsiella pneumoniae 342) |
2e-18 |
71 |
|
phage protein |
NC_016745 (Oceanimonas sp. GK1) |
5e-08 |
43 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_014973 (Geobacter sp. M18) |
1e-06 |
48 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_016845 (Klebsiella pneumoniae HS11286) |
1e-06 |
41 |
|
hypothetical protein |
NC_020418 (Morganella morganii KT) |
1e-06 |
42 |
|
DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR family |
NC_021521 (Haemophilus parasuis ZJ0906) |
5e-06 |
43 |
|
TraR/DksA family transcriptional regulator |
NC_011768 (Desulfatibacillum alkenivorans AK-01) |
5e-06 |
43 |
|
DnaK suppressor protein/ C4-type zinc finger protein, DksA/TraR family |
NC_011852 (Haemophilus parasuis SH0165) |
6e-06 |
43 |
|
phage TraR/DksA family protein |
NC_007204 (Psychrobacter arcticus 273-4) |
9e-06 |
42 |
|
hypothetical protein |
NC_009656 (Pseudomonas aeruginosa PA7) |
2e-05 |
48 |
|
hypothetical protein |
NC_009656 (Pseudomonas aeruginosa PA7) |
2e-05 |
48 |
|
hypothetical protein |
NC_005126 (Photorhabdus luminescens TTO1) |
7e-05 |
43 |
|
prophage PSPPH06, DksA/TraR family C4-type zinc finger protein |
NC_005773 (Pseudomonas syringae 1448A) |
1e-04 |
43 |
|
hypothetical protein |
NC_014306 (Erwinia billingiae Eb661) |
3e-04 |
41 |
|
hypothetical protein |
NC_017531 (Pantoea ananatis AJ13355) |
4e-04 |
41 |
|
CP80 |
NC_013956 (Pantoea ananatis LMG 20103) |
4e-04 |
41 |
|
TraR/DksA family transcriptional regulator |
NC_016816 (Pantoea ananatis LMG 5342) |
4e-04 |
41 |
|
TraR/DksA family transcriptional regulator |
NC_017554 (Pantoea ananatis PA13) |
4e-04 |
41 |
|
hypothetical protein |
NC_015460 (Gallibacterium anatis UMN179) |
7e-04 |
42 |
|
phage/conjugal plasmid C-4 type zinc finger protein, TraR family |
NC_015556 (Pseudomonas fulva 12-X) |
0.002 |
46 |
|
C4-type zinc finger protein, DksA/TraR family |
NC_016830 (Pseudomonas fluorescens F113) |
0.003 |
44 |
|
TraR/DksA family transcriptional regulator |
NC_008751 (Desulfovibrio vulgaris DP4) |
0.003 |
42 |
|
TraR/DksA family transcriptional regulator |
NC_008751 (Desulfovibrio vulgaris DP4) |
0.007 |
42 |
|
hypothetical protein |
NC_021500 (Enterobacter sp. R4-368) |
0.008 |
41 |
|
hypothetical protein |
NC_021659 (Serratia plymuthica S13) |
5.4 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_006155_P1' AND ph.id_pai_orf='3' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc