Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
ShiA-like protein |
NC_004431 (Escherichia coli CFT073) |
5e-162 |
100 |
|
SHI-2 pathogenicity island protein |
NC_017646 (Escherichia coli CE10) |
2e-161 |
99 |
|
SHI-2 pathogenicity island protein |
NC_011750 (Escherichia coli IAI39) |
2e-161 |
99 |
|
SHI-2 pathogenicity island protein |
NC_011751 (Escherichia coli UMN026) |
2e-161 |
99 |
|
ShiA-like protein |
NC_008563 (Escherichia coli APEC O1) |
3e-161 |
99 |
|
SHI-2 pathogenicity island protein |
NC_011742 (Escherichia coli S88) |
3e-161 |
99 |
|
ShiA-like protein |
NC_017631 (Escherichia coli ABU 83972) |
6e-161 |
99 |
|
putative protein ShiA |
NC_017644 (Escherichia coli NA114) |
6e-161 |
99 |
|
ShiA-like protein |
NC_017652 (Escherichia coli clone D i14) |
2e-160 |
99 |
|
ShiA-like protein |
NC_017651 (Escherichia coli clone D i2) |
2e-160 |
99 |
|
hypothetical protein |
NC_016822 (Shigella sonnei 53G) |
3e-140 |
83 |
|
ShiA-like protein |
NC_004431 (Escherichia coli CFT073) |
9e-138 |
87 |
|
ybl161 |
NC_012892 (Escherichia coli BL21(DE3)) |
1e-137 |
87 |
|
ShiA-like protein |
NC_012971 (Escherichia coli BL21(DE3)) |
1e-137 |
87 |
|
hypothetical protein |
NC_012947 (Escherichia coli Escherichia coli BL21-Gold(DE3)pLysS AG) |
1e-137 |
87 |
|
ShiA-like protein |
NC_012967 (Escherichia coli REL606) |
1e-137 |
87 |
|
ShiA-like protein |
NC_017328 (Shigella flexneri 2002017) |
6e-134 |
84 |
|
hypothetical protein |
NC_004741 (Shigella flexneri 2457T) |
6e-134 |
84 |
|
hypothetical protein |
NC_004337 (Shigella flexneri 301) |
6e-134 |
84 |
|
hypothetical protein |
NC_008258 (Shigella flexneri 8401) |
6e-134 |
84 |
|
SHI-2 pathogenicity island protein |
NC_017646 (Escherichia coli CE10) |
3e-132 |
83 |
|
SHI-2 pathogenicity island protein |
NC_011750 (Escherichia coli IAI39) |
3e-132 |
83 |
|
hypothetical protein |
NC_017633 (Escherichia coli ETEC H10407) |
1e-131 |
87 |
|
Putative ShiA |
NC_017644 (Escherichia coli NA114) |
2e-131 |
79 |
|
ShiA |
NC_021902 (Salmonella enterica USMARC-S3124.1) |
9e-130 |
88 |
|
hypothetical protein |
NC_007384 (Shigella sonnei Ss046) |
7e-129 |
85 |
|
ShiA-like protein |
NC_011083 (Salmonella enterica SL476) |
2e-126 |
86 |
|
hypothetical protein |
NC_007606 (Shigella dysenteriae Sd197) |
2e-121 |
86 |
|
hypothetical protein |
NC_021231 (Klebsiella pneumoniae SB3432) |
5e-82 |
56 |
|
hypothetical protein |
NC_021232 (Klebsiella pneumoniae SB3432) |
5e-82 |
56 |
|
hypothetical protein |
NC_021232 (Klebsiella pneumoniae SB3432) |
5e-82 |
56 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='NC_004431_P1' AND ph.id_pai_orf='3' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc