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Homologs of SF2965 gene of NC_004337_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) SFxv_3246
( YP_005728585.1 )

putative superfamily I DNA helicase

NC_017328
(Shigella flexneri 2002017)

0.0

100

2) S3169
( NP_838460.1 )

superfamily I DNA helicase

NC_004741
(Shigella flexneri 2457T)

0.0

100

3) SF2965
( NP_708739.1 )

superfamily I DNA helicase

NC_004337
(Shigella flexneri 301)

0.0

100

4) EC55989_4686
( YP_002405548.1 )

superfamily I DNA helicase

NC_011748
(Escherichia coli 55989)

0.0

5) SSON53_18245
( YP_005458153.1 )

superfamily I DNA helicase

NC_016822
(Shigella sonnei 53G)

0.0

6) SSON_3225
( YP_312041.1 )

superfamily I DNA helicase

NC_007384
(Shigella sonnei Ss046)

0.0

7) ECABU_c48370
( YP_006108747.1 )

phospholipase D

NC_017631
(Escherichia coli ABU 83972)

0.0

8) UM146_21615
( YP_006113163.1 )

superfamily I DNA helicase

NC_017632
(Escherichia coli UM146)

0.0

9) UTI89_C4880
( YP_543814.1 )

DNA helicase superfamily protein I

NC_007946
(Escherichia coli UTI89)

0.0

10) ECP_4523
( YP_672360.1 )

superfamily I DNA helicases

NC_008253
(Escherichia coli 536)

0.0

11) APECO1_3532
( YP_854230.1 )

superfamily I DNA helicase

NC_008563
(Escherichia coli APEC O1)

0.0

12) CE10_4871
( YP_006146827.1 )

superfamily I DNA helicase

NC_017646
(Escherichia coli CE10)

0.0

13) ECS88_3251
( YP_002392872.1 )

superfamily I DNA helicase

NC_011742
(Escherichia coli S88)

0.0

14) ECIAI39_4598
( YP_002410462.1 )

putative superfamily I DNA helicase

NC_011750
(Escherichia coli IAI39)

0.0

15) SBG_3912
( YP_004732695.1 )

hypothetical protein

NC_015761
(Salmonella bongori NCTC 12419)

0.0

16) STM14_5386
( YP_005240814.1 )

putative DNA helicase

NC_016856
(Salmonella enterica 14028S)

0.0

17) UMN798_4858
( YP_005399737.1 )

superfamily I DNA helicase

NC_017046
(Salmonella enterica 798)

0.0

18) CFSAN001921_17985
( YP_008256933.1 )

DNA helicase

NC_021814
(Salmonella enterica CFSAN001921)

0.0

19) STMMW_44341
( YP_005235428.1 )

superfamily I DNA helicase

NC_016854
(Salmonella enterica D23580)

0.0

20) STM4489
( NP_463348.1 )

DNA helicases

NC_003197
(Salmonella enterica LT2)

0.0

21) SL1344_4418
( YP_005184280.1 )

superfamily I DNA helicase

NC_016810
(Salmonella enterica SL1344)

0.0

22) STM474_4687
( YP_005245454.1 )

Putative superfamily I DNA helicase

NC_016857
(Salmonella enterica ST4/74)

0.0

23) STMDT12_C46160
( YP_005250312.1 )

putative DNA helicase

NC_016860
(Salmonella enterica T000240)

0.0

24) STU288_22510
( YP_007905581.1 )

superfamily I DNA helicase

NC_021151
(Salmonella enterica U288)

0.0

25) STMUK_4475
( YP_005254914.1 )

putative DNA helicase

NC_016863
(Salmonella enterica UK-1)

0.0

26) SPAB_05652
( YP_001591753.1 )

hypothetical protein

NC_010102
(Salmonella enterica SGSC4150; SPB7)

0.0

27) CKO_03472
( YP_001454988.1 )

hypothetical protein

NC_009792
(Citrobacter koseri ATCC BAA-895)

0.0

28) SeSA_A4746
( YP_002117410.1 )

superfamily I DNA helicase

NC_011094
(Salmonella enterica CVM19633)

0.0

29) S70_12655
( YP_006217065.1 )

superfamily I DNA helicase

NC_017731
(Providencia stuartii MRSN 2154)

0.0

30) XFLM_01315
( YP_005999641.1 )

phospholipase D/transphosphatidylase

NC_017562
(Xylella fastidiosa GB514)

0.0

31) XfasM23_1514
( YP_001830198.1 )

phospholipase D/transphosphatidylase

NC_010577
(Xylella fastidiosa M23)

0.0

32) PD1429
( NP_779627.1 )

DNA helicase

NC_004556
(Xylella fastidiosa Temecula1)

0.0

33) XF2409
( NP_299688.2 )

hypothetical protein

NC_002488
(Xylella fastidiosa 9a5c)

0.0

34) AXYL_00800
( YP_003976865.1 )

phospholipase D

NC_014640
(Achromobacter xylosoxidans A8)

0.0

35) Fraau_1932
( YP_005378005.1 )

hypothetical protein

NC_017033
(Frateuria aurantia DSM 6220)

0.0

36) Shew185_1979
( YP_001366185.1 )

phospholipase D/transphosphatidylase

NC_009665
(Shewanella baltica OS185)

0.0

37) PCNPT3_07920
( YP_007640360.1 )

phospholipase D/transphosphatidylase

NC_020802
(Psychromonas sp. CNPT3)

0.0

38) Sden_1238
( YP_562247.1 )

phospholipase D/transphosphatidylase

NC_007954
(Shewanella denitrificans OS217)

0.0

39) OAN307_c19380
( YP_007704221.1 )

putative DNA helicase-like protein

NC_020911
(Octadecabacter antarcticus 307)

0.0

• Sequence Alignments

1) SFxv_3246 in NC_017328


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1861 bits (7068),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1171/1171 (100%), Positives = 1171/1171 (100%), Gaps = 0/1171 (0%)

Query  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60
             MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

2) S3169 in NC_004741


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1861 bits (7068),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1171/1171 (100%), Positives = 1171/1171 (100%), Gaps = 0/1171 (0%)

Query  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60
             MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

3) SF2965 in NC_004337


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1861 bits (7068),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1171/1171 (100%), Positives = 1171/1171 (100%), Gaps = 0/1171 (0%)

Query  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60
             MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

4) EC55989_4686 in NC_011748


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1859 bits (7061),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1170/1171 (99%), Positives = 1171/1171 (100%), Gaps = 0/1171 (0%)

Query  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60
             MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGASDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGA+DIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

5) SSON53_18245 in NC_016822


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1854 bits (7042),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1165/1171 (99%), Positives = 1169/1171 (99%), Gaps = 0/1171 (0%)

Query  1     MDENALGFTSYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFKGEKDD  60
             MDENALGF+SYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDEAIVSKFF GEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLIVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHL+VCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQGISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQ+ISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

6) SSON_3225 in NC_007384


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1852 bits (7035),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1165/1171 (99%), Positives = 1168/1171 (99%), Gaps = 0/1171 (0%)

Query  1     MDKNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFKGEKDD  60
             MD NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDEAIVSKFF GEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLIVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHL+VCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQGISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQ+ISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

7) ECABU_c48370 in NC_017631


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1839 bits (6985),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1150/1171 (99%), Positives = 1164/1171 (99%), Gaps = 0/1171 (0%)

Query  1     MDENALGFTSYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLEEAIVSKFFKGEKDD  60
             MDENALGF+SYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRL+EAIVSKFF GEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQLEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQ EWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLNNLNKLLSGQEQKI  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYL+NLNKLLSGQEQK+
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIILKEQQAVQEWQRLALDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEI+LKEQQAVQEWQRLA+DLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQEEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQ+EKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQLPPIWSIAPAIDVGNMLAEKILSGSTQEEITAKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQ+PPIWSIAPAIDVGNMLAEKILSGSTQEEIT KYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPEMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMP MGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHITIVSPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHITI+SPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVKRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLV+RVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

8) UM146_21615 in NC_017632


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1838 bits (6983),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1150/1171 (99%), Positives = 1165/1171 (99%), Gaps = 0/1171 (0%)

Query  1     MDENALGFTSYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFKGEKDD  60
             MDENALGF+SYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDEAIVSKFF GEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQVWAARELIANDIEQYLDNLNKLLSGQEQKI  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQ++AARELIANDIEQYLDNLNKLLSGQEQK+
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIILKEQQAVQEWQRLALDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEI+LKEQQAVQEWQRLA+DLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQEEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQ+EKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQLPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQ+PPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPEMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMP MGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHIMIVSPWLTWQRLEQTGFLDSMIAACSRGVNVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHI I+SPWLTWQRLEQTGFLDSMIAACSRG+NVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEVEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGE+EAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

9) UTI89_C4880 in NC_007946


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1838 bits (6983),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1150/1171 (99%), Positives = 1165/1171 (99%), Gaps = 0/1171 (0%)

Query  1     MDENALGFTSYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFKGEKDD  60
             MDENALGF+SYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDEAIVSKFF GEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180
             PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCNKDVPLFNRF  240
             SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVCNKDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQVWAARELIANDIEQYLDNLNKLLSGQEQKI  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQ++AARELIANDIEQYLDNLNKLLSGQEQK+
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIILKEQQAVQEWQRLALDLGYEGDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEI+LKEQQAVQEWQRLA+DLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQEEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQ+EKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQLPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQ+PPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPEMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMP MGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHIMIVSPWLTWQRLEQTGFLDSMIAACSRGVNVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHI I+SPWLTWQRLEQTGFLDSMIAACSRG+NVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEVEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGE+EAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

10) ECP_4523 in NC_008253


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1832 bits (6960),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1145/1171 (98%), Positives = 1162/1171 (99%), Gaps = 0/1171 (0%)

Query  1     MDKNALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60
             MD NALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTIHTSFSINFDDGIDKTAETDEEREARYAALQQEWRQYLDD  180
             PLPKGAFSIGEIGQYDKYKT HT+FSINFDD++DKTAETDEEREARYAALQQEWRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVAGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYEHLLVCKKDVPLFNRF  240
             SERLLK+VAGDWI +PEQYELAEHGYIVKTAQSGGAS HILSLY+HLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQVRAARELIANDIEQYLDNLNKLLSGQEQKI  480
             EKVIELLHGQLAAKSEQLIRLNATWQTLSQ+RAARELIANDIEQYLDNLNKLLSGQEQK+
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIILKEQQAVQEWQRLALDLGYEGDEELSFSLA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEI+LKEQQAVQEWQRLA+DLGYEGDEELSFS A
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQEEKKKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQ+EKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQLPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780
             GDTEQ+PPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPEMGYLHID  840
             ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMP MGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900
             GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTSKHITIVSPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENTSKHITI+SPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEMRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFE RKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

11) APECO1_3532 in NC_008563


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1802 bits (6845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1136/1171 (98%), Positives = 1157/1171 (99%), Gaps = 0/1171 (0%)

Query  5     MDENALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFEGEKDD  64
             MDENALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  65    VETVDVVLRPKVYFRLLQHGKDRSAGAPDIVTPLVTPALLSREGFLYPTPATSIPRDLLE  124
             VETVDV+LRPKVYFRLLQHGKDRSAGAPDIVTP+VTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  125   PLPKGAFSIGEIGQYDKYKTIHTSFSINFDDSIDKTAETDEEREARYAALQQEWRQYLDD  184
             PLPKGAFSIGEIGQYDKYKT HT+FSINFDDS+DKTAETDEEREARYAALQQEWRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  185   SERLLKNVAGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  244
             SERLLK+VAGDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  245   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  304
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  305   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  364
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  365   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  424
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  425   EKVIELLHGQLVAKSEQLKRLNATWQTLSQVRAARELIANDIEQYLDNLNKLLSGQEQKV  484
             EKVIELLHGQL AKSEQL RLNATWQTLSQ+RAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  485   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  544
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  545   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  604
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  605   DELADTQIRFPAFLLTTHYWEGRWLMDMARIDDLQEEKKKKGAKGVTARWQRRMKLTPCV  664
             DELADTQIRFPAFLLTTHYWEGRWLMDMA IDDLQ+EKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  665   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  724
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  725   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  784
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  785   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  844
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  845   GKGEQASSGSRYNLLEAETIAAWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQAL  904
             GKGE ASSGSRYNLLEAETIA WLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  905   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  964
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  965   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTSETKIYTLHGVE  1024
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKT+ TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1025  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1084
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1085  KDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1144
             +DFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1145  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1175
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

12) CE10_4871 in NC_017646


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1802 bits (6845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1136/1171 (98%), Positives = 1157/1171 (99%), Gaps = 0/1171 (0%)

Query  5     MDENALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFEGEKDD  64
             MDENALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  65    VETVDVVLRPKVYFRLLQHGKDRSAGAPDIVTPLVTPALLSREGFLYPTPATSIPRDLLE  124
             VETVDV+LRPKVYFRLLQHGKDRSAGAPDIVTP+VTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  125   PLPKGAFSIGEIGQYDKYKTIHTSFSINFDDSIDKTAETDEEREARYAALQQEWRQYLDD  184
             PLPKGAFSIGEIGQYDKYKT HT+FSINFDDS+DKTAETDEEREARYAALQQEWRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  185   SERLLKNVAGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  244
             SERLLK+VAGDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  245   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  304
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  305   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  364
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  365   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  424
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  425   EKVIELLHGQLVAKSEQLKRLNATWQTLSQVRAARELIANDIEQYLDNLNKLLSGQEQKV  484
             EKVIELLHGQL AKSEQL RLNATWQTLSQ+RAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  485   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  544
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  545   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  604
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  605   DELADTQIRFPAFLLTTHYWEGRWLMDMARIDDLQEEKKKKGAKGVTARWQRRMKLTPCV  664
             DELADTQIRFPAFLLTTHYWEGRWLMDMA IDDLQ+EKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  665   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  724
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  725   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  784
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  785   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  844
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  845   GKGEQASSGSRYNLLEAETIAAWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQAL  904
             GKGE ASSGSRYNLLEAETIA WLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  905   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  964
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  965   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTSETKIYTLHGVE  1024
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKT+ TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1025  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1084
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1085  KDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1144
             +DFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1145  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1175
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

13) ECS88_3251 in NC_011742


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1802 bits (6845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1136/1171 (98%), Positives = 1157/1171 (99%), Gaps = 0/1171 (0%)

Query  5     MDENALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFEGEKDD  64
             MDENALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  65    VETVDVVLRPKVYFRLLQHGKDRSAGAPDIVTPLVTPALLSREGFLYPTPATSIPRDLLE  124
             VETVDV+LRPKVYFRLLQHGKDRSAGAPDIVTP+VTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  125   PLPKGAFSIGEIGQYDKYKTIHTSFSINFDDSIDKTAETDEEREARYAALQQEWRQYLDD  184
             PLPKGAFSIGEIGQYDKYKT HT+FSINFDDS+DKTAETDEEREARYAALQQEWRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  185   SERLLKNVAGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  244
             SERLLK+VAGDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  245   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  304
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  305   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  364
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  365   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  424
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  425   EKVIELLHGQLVAKSEQLKRLNATWQTLSQVRAARELIANDIEQYLDNLNKLLSGQEQKV  484
             EKVIELLHGQL AKSEQL RLNATWQTLSQ+RAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  485   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  544
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  545   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  604
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  605   DELADTQIRFPAFLLTTHYWEGRWLMDMARIDDLQEEKKKKGAKGVTARWQRRMKLTPCV  664
             DELADTQIRFPAFLLTTHYWEGRWLMDMA IDDLQ+EKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  665   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  724
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  725   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  784
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  785   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  844
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  845   GKGEQASSGSRYNLLEAETIAAWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQAL  904
             GKGE ASSGSRYNLLEAETIA WLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  905   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  964
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  965   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTSETKIYTLHGVE  1024
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKT+ TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1025  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1084
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1085  KDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1144
             +DFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1145  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1175
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

14) ECIAI39_4598 in NC_011750


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1801 bits (6840),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1135/1171 (97%), Positives = 1157/1171 (99%), Gaps = 0/1171 (0%)

Query  5     MDENALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDEAIVSKFFEGEKDD  64
             MDENALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDEAIVSKFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  65    VETVDVVLRPKVYFRLLQHGKDRSAGAPDIVTPLVTPALLSREGFLYPTPATSIPRDLLE  124
             VETVDV+LRPKVYFRLLQHGKDRSAGAPDIVTP+VTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  125   PLPKGAFSIGEIGQYDKYKTIHTSFSINFDDSIDKTAETDEEREARYAALQQEWRQYLDD  184
             PLPKGAFSIGEIGQYDKYKT HT+FSINFDDS+DKTAETDEEREARYAALQQEWRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  185   SERLLKNVAGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  244
             SERLLK+VAGDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  245   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  304
             ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  305   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  364
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  365   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  424
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  425   EKVIELLHGQLVAKSEQLKRLNATWQTLSQVRAARELIANDIEQYLDNLNKLLSGQEQKV  484
             EKVIELLHGQL AKSEQL RLNATWQTLSQ+RAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  485   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  544
             TLLKSAKTEWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  545   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  604
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  605   DELADTQIRFPAFLLTTHYWEGRWLMDMARIDDLQEEKKKKGAKGVTARWQRRMKLTPCV  664
             DELADTQIRFPAFLLTTHYWEGRWLMDMA IDDLQ+EKKKKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  665   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  724
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  725   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  784
             GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  785   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  844
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  845   GKGEQASSGSRYNLLEAETIAAWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQAL  904
             GKGE ASSGSRYNLLEAETIA WLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  905   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSSVYSKHEDGGFIDSDNSMLNVAVSRAK  964
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFS+VYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  965   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTSETKIYTLHGVE  1024
             DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKT+ TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1025  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1084
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1085  KDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1144
             +DFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1145  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1175
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

15) SBG_3912 in NC_015761


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1768 bits (6715),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1106/1171 (95%), Positives = 1147/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDENALGFASYWRNSLADAESGKGSFERKDAKNFAHWHGIAAGRLDEAIVDKFFEGEKDD  60
             MDENALGFASYWRNSLADAESGKGSF RKDA+NF+HWHGIAAGRLDEAIV KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDSVDKTAETDEEREARYAALQQEWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDDSVDKTAETDEEREARYAALQQEWRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLTPEAKFSDRLGHSGDKFPLAQAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDRLGHSGDKFPLA+AQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVENALLFYLEKAKAAFPEKDCSTP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVE+ALLFYLEKAKAAFP K+CS+P
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKYEQLVRLNAAWQTLSQVRAARELIANDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAK EQL+RLNA+WQTLSQ+RAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRAGESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWFDPET  540
             T LKSAK+EWKKYRAGESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQW DPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHESDEELSFSQA  600
             IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG E+DEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAKIDDLQKEKGKKGAKGVTVRWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA IDDLQ EK KKGAKGVT RWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSIAPAIDIGNMLAEKILSGSTQEEITEKYAAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSIAPAID+GNMLAEKILSGSTQEEITEKY+AIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEENNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EE+NLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQDIETHYGKSLHEVVGIVTPFSAQVSTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IE+HYGKSLHEVVGIVTPFSAQVSTIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQGISTGANETSLTVGTVHSLQGAERAIVLFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQ+ISTG+NE SLTVGTVHSLQGAERAIV+FSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTSETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKT+ TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTGKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENT+KHITI+SPWLTWQ+LEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaldklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAAL+KLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

16) STM14_5386 in NC_016856


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

17) UMN798_4858 in NC_017046


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

18) STMMW_44341 in NC_016854


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

19) STM4489 in NC_003197


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

20) SL1344_4418 in NC_016810


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

21) STM474_4687 in NC_016857


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

22) STMDT12_C46160 in NC_016860


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

23) STU288_22510 in NC_021151


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

24) STMUK_4475 in NC_016863


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

25) CFSAN001921_17985 in NC_021814


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1761 bits (6689),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSINFDD VDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDR+GHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQV+TIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+GTNE SLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSL+RRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

26) SPAB_05652 in NC_010102


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1752 bits (6655),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1146/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTIHTSFSINFDDSVdrtaetdeerearyaaWQQDWRQYLDD  180
             PLPKGAFSIGEIGQYDKYKT HT+FSINFDDSVD+TAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLLVC+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLSQ+RA+RELI NDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             T LKSAK+EWKKYRA+ESLIY+LFSWLP VR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLG EGDEELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTLIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV  660
             DELADT IRFPAFLLTTHYWEGRWLMDMA+IDDLQ EK KKGAKGVTARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFTLAKKALVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASF+LAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIVAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVSTIKQAL  900
             GKGELASSGSRYNLLEAETI  WL++NQQ+IEAHYGKSLHEVVGIVTPFSAQVSTIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGANEKALTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+G+NEK+LTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL+FDYKERKDLKTA TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT KHITI+SPWLTWQ+LEQTGFLDSMI+ACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

27) CKO_03472 in NC_009792


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1740 bits (6609),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1105/1171 (95%), Positives = 1145/1171 (98%), Gaps = 0/1171 (0%)

Query  1     MDENALGFASYWRNSLADAESGKGSFERKDAKNFTHWHEIAAGRLDEAIVGKFFEGEKDD  60
             MDENALGFASYWRNSLADAESGKGSF RKDA+NFTHWH IAAGRLDEAIV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDIILRPKVYFRLLQHGKDRSAGAPDIVTPIVTSALLSREGFLYPTPATSIPRDLLE  120
             VETVD+ILRPKVYFRLLQHGKDRSAGAPDIVTPIVT+ALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIEQYDKYKTTHTSFSINVDYSVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEI QYDKYKTTHT+FSIN D SVDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLICKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLL+C+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+GAMAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKDCSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP K+CSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNATWQTLSLVRAARELIANDIEQYLDNLNKLLSGQEQKV  480
             EKVIELLHGQLAAKSEQL+RLNATWQTLS +RAARELIANDIEQYLDNLNKLLSGQEQKV
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKAEWKKYRASESLIYSLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAK+EWKKYRA+ESLIYSLFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDGLLNSAEREQTTYRQQIDSTHEIVLKEQQVAQEWQRLALDLGHEGDEELSFSQV  600
             IERNIDGLLNSAEREQTTYRQQIDS+HEIVLKEQQ  QEWQRLA+DLG EGDEELSFSQ 
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQkekgkkgakgvaaRWQRRMKLTPCV  660
             DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQ EK KKGAKGV+ARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSIAPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSIAPAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGLEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLPEAETIAAWLTENQQDIETHYGKALHEIVGIVTPFSAQVSTIKQAL  900
             GKGELASSGSRYNL EAETIA WL+ENQQ+IE+HYGK+LHE+VGIVTPFSAQVSTIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   GKQGISTGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             GKQ+ISTG+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRELLAKYLFESEKNALTFDYKERKDLKTSETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPR LLAKYLFESEKNAL+FDYKERKDLKT+ TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTGKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080
             QHDNFLNQTFENT+KHITI+SPWLTWQ+LEQTGFLDSMIAACSRGINVTIVTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

28) SeSA_A4746 in NC_011094


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1738 bits (6602),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 1101/1171 (95%), Positives = 1148/1171 (99%), Gaps = 0/1171 (0%)

Query  1     MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD  60
             MD+NALGFASYWRNSLADAESGKGSF RKDA+NFTHWHGIAAGRLDE+IV+KFFEGEKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120
             VETVDVILRPKVYFRLLQ+GKD+SAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLPKGAFSIGEIGQYDKYKTTHTSFSINFDDSVDKTAETDEEREARYAAWQQDWRQYLDD  180
             PLPKGAFSIGEIGQYDKYKTTHT+FSINFDDSVDKTAETDEEREARYAA QQ+WRQYL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLICKKDVPLFNRF  240
             SERLLK+V GDWI +PEQYELAEHGYIVKTAQSGGAS HILSLYDHLL+C+KDVPLFNRF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ASREVHAAESLLPPEAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300
             ASREVHAAESLL+P AKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGVMAGRWLP  360
             KTTLVLSIIATQWARAALEK+EPPVIIATSTNNQAVTNIIEAFGKDFSQG+G MAGRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP  420
             ELKSFGAYFPSS+RKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFP KECSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKVIELLHGQLAAKSEQLVRLNTTWQTLSQVRAARELIANDIKQYLDNLNKLLVGQEQNV  480
             EKVIELLHGQLAAKSEQL+RLN+TWQTLSQ+RAARELIANDI QYLDNLNKLL GQEQ+V
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   TLLKSAKAEWKKYRASESLIYPLFSWLPAVRSKRQYQIQLFLEDKLGALIAGNQWSDPET  540
             TLLKSAK+EWKKYRA+ESLIY+LFSWLPAVR+KRQYQIQLFLEDKLGALIAGNQWSDPET
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGYEGGEELSFSQA  600
             IERNID LLNSAEREQTTYRQQIDSAHEIVLKEQQA QEWQRLA+DLGYEG+EELSFSQA
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPAFLLATHYWEGRWLMDMASIDDLQkekgkkgakgvaaRWQRRMKLTPCV  660
             DELADTQIRFPAFLL+THYWEGRWLMDMASIDDLQ EK KKGAKGV+ARWQRRMKLTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVaaasfalakkalVI  720
             VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC  780
             GDTEQIPPIWSI+PAID+GNMLAEKILSGSTQEEITEKYTAIA+LGKSAASGSVMKIAQ 
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID  840
             ASRYQYDPELARGMYLYEHRRC+DNIIGYCNTLCYHGKLLPKRG EESNLMPAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAYYGKSLHEVVGIVTPFSAQVSTIKQAL  900
             GKGELASSGSRYNLLEAETIA WL++NQQ+IEA YGKSLHEVVGIVTPFSAQVSTIKQ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   DKQGISAGANEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK  960
             +KQ+IS+G+NEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDG+FIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALFFDYKEREDLKTSETKIYTLHGVE  1020
             DSFLVFGDMDLFE+QPASSPRGLLAKYLFESEKNAL FDYKER DLKT+ TKIYTLHGVE
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  QHDNFLNQTFENTGKHITIVSPWLTWQKLEQTGFLDSMIAACSRGINVTVVTDRSYNTEH  1080
             QHDNFLNQTFENT+KHITI+SPWLTWQ+LEQTGFLDSMIAACSRGINVT+VTDRSYNTEH
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  NDFEKRKEKQQnlkaaleklnalGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140
             NDFEKRKEKQQN+KAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171
             YERYDTSMVYCGDNLKGEIEAIYNSLERRQV
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

29) S70_12655 in NC_017731


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score = 1338 bits (5077),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 768/1169 (66%), Positives = 985/1169 (85%), Gaps = 0/1169 (0%)

Query  1     MDDNYLKLAAYWRNSLADAESGKGALEKRDTNNLIKWESVSSGRLDSIITERFFSDEKDD  60
             MD+N L +A+YWRNSLADAESGKG++ ++D++N+  W+++++GRLD  I  +FF +EKDD
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  61    VNTVDVILRPKVFIRLIQHGKERLAGSPTYVTPLVTLAKINREGFLFPTSTTVIPRDLLE  120
             V+TVDVILRPKV++RL+QHGK+R AG+P  VTP+VT A ++REGFL+PT++T IPRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  121   PLSHGSFSIGEISEYDKYKTTNTSSSMHYDESHLeteeteeekekRYEGYFQGWGSYLDD  180
             PL+ G+FSIGEI++YDKYKTT+T+ S+++D+S   T ET+EE+E RY +  Q W  YL D
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  181   SYKLLNSIAESWINTHEQYELADYGYILKKVEPKGASTHILSLYDHLLVNKKKVPLFERF  240
             S +LL+S+A  WI+  EQYELA+ GYI+K  ++ GAS+HILSLYDHLLV +K VPLF+RF
Sbjct  181   SERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  241   ANFTSPEIEPLISTEDSFVYRLGHSGDRFPLALAQRDALGHFLNANDGDILAVNGPPGTG  300
             A+      E+L++    F  RLGHSGD+FPLA AQRDAL+HFL+A +GDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  301   KTTLLLSIIATLWAKAALEQTNPPIVLATSTNNQAVTNIIEAFGKDFSEGNGAMSGRWLP  360
             KTTL+LSIIAT WA+AALE+++PP+++ATSTNNQAVTNIIEAFGKDFS+G+GAM+GRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  361   NIKSFGAYFPSSTKKAEAIKKYQTDEFFKEIESKEYIESALDFYLNKAKLAFPNKDCSSP  420
             ++KSFGAYFPSS++KAEA KKYQT++FF+++ESKEY+E AL FYL+KAK AFP K+CSSP
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  421   EKIIALLHEQLSEQSNKLVEIKQTWDSLQEIRGKIAQVSDDINSYLNDQTVLLSKTQSKI  480
             EK+I LLH QL+ +S++L+ ++ TW++L +IR+    +++DI+ YL++   LLS  + K+
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQKV  480

Query  481   DRLKIASVEWDKYRANESLFISLFSWLPPVGKKRYYQVKLFLADKLDGFDIEKEPTEINV  540
               LK A  EW KYRA ESL+ SLFSWLP+V +KR YQ++LFL DKL+++   ++ ++ + 
Sbjct  481   TLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPET  540

Query  541   IDSLIKKLLDSEERKQEDYQQQINYIHQITQQEKEILAKWLTIASELGYKQGEEPNLLQI  600
             I+  I  LL+S ER Q  Y+QQI+  H+I  +E++ +  W  +A +LGY  +EE ++ Q 
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  601   DELADTQIRFPLFLLTTHYWEGRWLIDVLNIDDLNKEKGKNGLKTVERHWQRKMMLTPCV  660
             DELADTQIRFP FLLTTHYWEGRWL+D+ +IDDL+ EK K+G K V  +WQR+M LTPCV
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKLTPCV  660

Query  661   VMTCYMLPNYMLLPANKGQKKHERGYAYNIADLLIVDEAGQVLPEVaaasfafakkaLVI  720
             VMTCYMLP  M ++ +KGQ+K E++Y Y++ADLLIVDEAGQVLPEVAAASFA+AKKALVI
Sbjct  661   VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI  720

Query  721   GDTAQIPPIWNITRAIDSGNMLEEKILSENTQEQINAEYDSITELGKCSASGSVMKIAQL  780
             GDT QIPPIW+I+ AID GNML EKILS +TQE+I   Y +I++LGK +ASGSVMKIAQ+
Sbjct  721   GDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQF  780

Query  781   SSRYHYDSDLERGMYLYEHRRCFDNIIGYCNELCYQGKLLPKRGDSDNLLFPAMGYLHID  840
             +SRY+YD++L RGMYLYEHRRC+DNIIGYCN LCY+GKLLPKRG  ++ L PAMGYLHID
Sbjct  781   ASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHID  840

Query  841   GKGEQRNTGSRFNRLEAEIISAWLIENRQRIENHYGKPIQQIVGIVTPFSAQVSIIKDAL  900
             GKGE  ++GSR+N LEAE I+ WL EN+Q IE HYGK+++++VGIVTPFSAQVS IK+ L
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQVL  900

Query  901   SKQGITAETSENTLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960
             +KQ+I++ T+E++LTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK
Sbjct  901   GKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRAK  960

Query  961   DSFLVFGDMDLFEIQPPSSPRGLLAKYLFLEERNALHFEYKERQDLQKSNTQIYTLHGVK  1020
             DSFLVFGDMDLFE+QP+SSPRGLLAKYLF  E+NAL F+YKER+DL+ + T+IYTLHGV 
Sbjct  961   DSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGVE  1020

Query  1021  EHDDFLNQTISNTEKHITIISPWLNLQKLEQAGFIDSMAQATAKGIQVKVITDRNYNIQH  1080
             +HD+FLNQT+ NT KHITIISPWL  Q+LEQ+GF+DSM  A ++GI+V ++TDR+YN +H
Sbjct  1021  QHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTEH  1080

Query  1081  SDPEKRKEREVNLHNALEQLDSYGIATKLVRRVHSKIVIGDDNLLCIGSFNWFSASREAK  1140
             +D EKRKE++ N+  ALE+L++ GIATKLV RVHSKIVIGDD LLC+GSFNWFSA+REA+
Sbjct  1081  NDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR  1140

Query  1141  YERYDTSMVYCGGSLKEEIQAIHNNLERR  1169
             YERYDTSMVYCG++LK EI+AI N+LERR
Sbjct  1141  YERYDTSMVYCGDNLKGEIEAIYNSLERR  1169

30) XFLM_01315 in NC_017562


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  901 bits (3414),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/1193 (47%), Positives = 825/1193 (70%), Gaps = 38/1193 (3%)

Query  1     MQARSSAYARYWRHSLADSGTDRGVLRDAADSSFLEVSKQQLESGCVDRDIVAACFNKEA  60
             M+  + ++A YWR+SLAD+ +++G ++     +F     + + +G +D  IV+  F+ E 
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNF--THWHGIAAGRLDEAIVSKFFEGEK  58

Query  61    EQVQTVEVVIRLKVYVLLLQHGTPQRAGHPKIVTPLVTQALLARDGRIYPLARTMIPRDI  120
             ++V+TV+V++R KVY  LLQHG  + AG P IVTP+VT ALL+R+G +YP + T IPRD+
Sbjct  59    DDVETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDL  118

Query  121   LKPLVGGHFAIGTVSDQDAFLTRQPVPGIAFTGTENNADSLGDSNNADF---DRQWKQFL  177
             L PL  G F+IG +++ D + T +   +I F ++ +++   ++  +A +   +++W+Q+L
Sbjct  119   LEPLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYL  178

Query  178   AGCDRLLAEVGGGWPGAQGDYLEADYGYLTKKAAF--SSRHILALYDHLLLETTPQVPLF  235
              + +RLL  V+G+W     +Y  A+ GY+ K A    +S HIL+LYDHLL+    +VPLF
Sbjct  179   YDSERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLV-CNKDVPLF  237

Query  236   ERYASGEMAPPELCLPPHAGFSQRLAHGSDKRALSRTQRDALTHLLVARQGEILAVNGPP  295
             +R+AS E+ ++E  L+P A FS+RL+H++DK +L+++QRDAL+H+L AR+G+ILAVNGPP
Sbjct  238   NRFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPP  297

Query  296   GTGKTTLVLSVVASLWAHAALAGGEPPVIVAASTTNQAVTNIIDAFEKNFAKGEGPFAGR  355
             GTGKTTLVLS++A+ WA+AAL  +EPPVI+A+ST NQAVTNII+AF K+F++G G+ AGR
Sbjct  298   GTGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGR  357

Query  356   WLPKIKSFGALLGSADKESKTADKYHTEDFFNAVESVGYIAEAEQHYLRaaaaaFPEIPQ  415
             WLP +KSFGA + S+ + + +A KY+TEDFFN VES  Y+ +A   YL  A AAFP   +
Sbjct  358   WLPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPG--K  415

Query  416   ASFNVKGVTAALQEAIRKEAATLAAIEQAWSGLNDARDALRAELGETPATTMTQRRTQRD  475
                +   V   L+  +   +  L  ++ +W  L++ R A R  +++     + +      
Sbjct  416   ECSSPEKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAA-RELIANDIEQYLDNLNKLLS  474

Query  476   AAQAEKQVIETLITQWERYGADESLVYGLFSWLPAVAKKRMRLVRVFLNSIWPVHYPTQT  535
             + +    ++ +  T+W +Y A+ESL+Y+LFSWLPAV +KR   +++FL+       + + 
Sbjct  475   GQEQKVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQ  534

Query  536   WESIEQVDGWLSGMQRQCDDRLQEHSWAVTRGEKVLHEEQCHITTWQAALAKESALTGLM  595
             W   E ++  + G+    +         +  ++ ++  EQ  +  WQ  LA + +     
Sbjct  535   WSDPETIERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQR-LAFDLGY----  589

Query  596   EAAGQVSLADCDALADTSIRFRIFLLTTHYWEGRWLSEMQAQLPADLDGEKKKTGGTAVE  655
             E+  ++S+++ D LADT IRF  FLLTTHYWEGRWL +M +    DL++EKKK G+ +V 
Sbjct  590   EGDEELSFSQADELADTQIRFPAFLLTTHYWEGRWLMDMAS--IDDLQDEKKKKGAKGVT  647

Query  656   PRWRRRMKLTPCIVSTLFMLPKKMQVA-RRDEKNFSRNYLYDFADLLIVDEAGQVLPEVA  714
             +RW+RRMKLTPC+V T +MLP +MQ++ ++++++F ++YLYDFADLLIVDEAGQVLPEVA
Sbjct  648   ARWQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVA  707

Query  715   GASFALGKQALVIGDQLQIEPIWSIPESIDIGNLHAAELLGKEE-----DAYERLCQSGR  769
             +ASFAL+K+ALVIGD  QI PIWSI+ +ID+GN+ A  +L+        + Y  + + G+
Sbjct  708   AASFALAKKALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGK  767

Query  770   SAASGSVMQIAQRLSRYHYDPEMARGMFLYEHHRCFDEIVSYCNALCYQGKLIPKRGPKV  829
             SAASGSVM+IAQ  SRY+YDPE+ARGM+LYEH+RC+D+I++YCN+LCY+GKL+PKRG   
Sbjct  768   SAASGSVMKIAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRG---  824

Query  830   AALKNAAGKETGDGLPALGYLHVDGLCQKSSGGSRHNLYEAQTIAAWLAEHRESLQAQYG  889
                     +E ++ +PA+GYLH+DG  + +S+GSR NL EA+TIA WLAE++++++A+YG
Sbjct  825   --------REESNLMPAMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYG  876

Query  890   KPLHCIVGIVTPFGAQVRAISQACRDVGIEVGHEKDGITVGTVHALQGAERPVVIFSAVY  949
             K+LH +VGIVTPF+AQV +I Q     +I  G +  ++TVGTVH+LQGAER++VIFS+VY
Sbjct  877   KSLHEVVGIVTPFSAQVSTIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVY  936

Query  950   SKHADGGFIDQRTSMLNVAVSRAKNTFLVFGDMDVFTAAPKSRPRGLLAHYLFKDASNAL  1009
             SKH DGGFID   SMLNVAVSRAK++FLVFGDMD+F   P S PRGLLA YLF    NAL
Sbjct  937   SKHEDGGFIDSDNSMLNVAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNAL  996

Query  1010  CFQPLVRKDLQQVSTAVEVLQDAAEHDAFLLKALNKVQREIHIVSPWINKDRIQDIGAFK  1069
              F+   RKDL+  +T +  L++  +HD FL +++++  ++I I+SPW+  +R+++ G + 
Sbjct  997   SFDYKERKDLKTAGTKIYTLHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLD  1056

Query  1070  AMQEAVKRQVQVTVYTDQDLNtddk---kdikkitkVLQAARALRGVGIEVNFVDRVHSK  1126
             +M  A  R ++VT+ TD+  NT+++   K   K  +   A   L ++GI  ++V+RVHSK
Sbjct  1057  SMIAACSRGINVTIVTDRSYNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSK  1116

Query  1127  MVIGDDEVFCVGSFNWFSANRSAMYAKHETSLVYRGRGLADERQTRLNSLRQR  1179
             +VIGDD ++CVGSFNWFSA R A Y + +TS+VY G  L +E ++  NSL +R
Sbjct  1117  IVIGDDGLLCVGSFNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERR  1169

31) XfasM23_1514 in NC_010577


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  901 bits (3414),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/1193 (47%), Positives = 825/1193 (70%), Gaps = 38/1193 (3%)

Query  1     MQARSSAYARYWRHSLADSGTDRGVLRDAADSSFLEVSKQQLESGCVDRDIVAACFNKEA  60
             M+  + ++A YWR+SLAD+ +++G ++     +F     + + +G +D  IV+  F+ E 
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNF--THWHGIAAGRLDEAIVSKFFEGEK  58

Query  61    EQVQTVEVVIRLKVYVLLLQHGTPQRAGHPKIVTPLVTQALLARDGRIYPLARTMIPRDI  120
             ++V+TV+V++R KVY  LLQHG  + AG P IVTP+VT ALL+R+G +YP + T IPRD+
Sbjct  59    DDVETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDL  118

Query  121   LKPLVGGHFAIGTVSDQDAFLTRQPVPGIAFTGTENNADSLGDSNNADF---DRQWKQFL  177
             L PL  G F+IG +++ D + T +   +I F ++ +++   ++  +A +   +++W+Q+L
Sbjct  119   LEPLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYL  178

Query  178   AGCDRLLAEVGGGWPGAQGDYLEADYGYLTKKAAF--SSRHILALYDHLLLETTPQVPLF  235
              + +RLL  V+G+W     +Y  A+ GY+ K A    +S HIL+LYDHLL+    +VPLF
Sbjct  179   YDSERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLV-CNKDVPLF  237

Query  236   ERYASGEMAPPELCLPPHAGFSQRLAHGSDKRALSRTQRDALTHLLVARQGEILAVNGPP  295
             +R+AS E+ ++E  L+P A FS+RL+H++DK +L+++QRDAL+H+L AR+G+ILAVNGPP
Sbjct  238   NRFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPP  297

Query  296   GTGKTTLVLSVVASLWAHAALAGGEPPVIVAASTTNQAVTNIIDAFEKNFAKGEGPFAGR  355
             GTGKTTLVLS++A+ WA+AAL  +EPPVI+A+ST NQAVTNII+AF K+F++G G+ AGR
Sbjct  298   GTGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGR  357

Query  356   WLPKIKSFGALLGSADKESKTADKYHTEDFFNAVESVGYIAEAEQHYLRaaaaaFPEIPQ  415
             WLP +KSFGA + S+ + + +A KY+TEDFFN VES  Y+ +A   YL  A AAFP   +
Sbjct  358   WLPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPG--K  415

Query  416   ASFNVKGVTAALQEAIRKEAATLAAIEQAWSGLNDARDALRAELGETPATTMTQRRTQRD  475
                +   V   L+  +   +  L  ++ +W  L++ R A R  +++     + +      
Sbjct  416   ECSSPEKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAA-RELIANDIEQYLDNLNKLLS  474

Query  476   AAQAEKQVIETLITQWERYGADESLVYGLFSWLPAVAKKRMRLVRVFLNSIWPVHYPTQT  535
             + +    ++ +  T+W +Y A+ESL+Y+LFSWLPAV +KR   +++FL+       + + 
Sbjct  475   GQEQKVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQ  534

Query  536   WESIEQVDGWLSGMQRQCDDRLQEHSWAVTRGEKVLHEEQCHITTWQAALAKESALTGLM  595
             W   E ++  + G+    +         +  ++ ++  EQ  +  WQ  LA + +     
Sbjct  535   WSDPETIERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQR-LAFDLGY----  589

Query  596   EAAGQVSLADCDALADTSIRFRIFLLTTHYWEGRWLSEMQAQLPADLDGEKKKTGGTAVE  655
             E+  ++S+++ D LADT IRF  FLLTTHYWEGRWL +M +    DL++EKKK G+ +V 
Sbjct  590   EGDEELSFSQADELADTQIRFPAFLLTTHYWEGRWLMDMAS--IDDLQDEKKKKGAKGVT  647

Query  656   PRWRRRMKLTPCIVSTLFMLPKKMQVA-RRDEKNFSRNYLYDFADLLIVDEAGQVLPEVA  714
             +RW+RRMKLTPC+V T +MLP +MQ++ ++++++F ++YLYDFADLLIVDEAGQVLPEVA
Sbjct  648   ARWQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVA  707

Query  715   GASFALGKQALVIGDQLQIEPIWSIPESIDIGNLHAAELLGKEE-----DAYERLCQSGR  769
             +ASFAL+K+ALVIGD  QI PIWSI+ +ID+GN+ A  +L+        + Y  + + G+
Sbjct  708   AASFALAKKALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGK  767

Query  770   SAASGSVMQIAQRLSRYHYDPEMARGMFLYEHHRCFDEIVSYCNALCYQGKLIPKRGPKV  829
             SAASGSVM+IAQ  SRY+YDPE+ARGM+LYEH+RC+D+I++YCN+LCY+GKL+PKRG   
Sbjct  768   SAASGSVMKIAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRG---  824

Query  830   AALKNAAGKETGDGLPALGYLHVDGLCQKSSGGSRHNLYEAQTIAAWLAEHRESLQAQYG  889
                     +E ++ +PA+GYLH+DG  + +S+GSR NL EA+TIA WLAE++++++A+YG
Sbjct  825   --------REESNLMPAMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYG  876

Query  890   KPLHCIVGIVTPFGAQVRAISQACRDVGIEVGHEKDGITVGTVHALQGAERPVVIFSAVY  949
             K+LH +VGIVTPF+AQV +I Q     +I  G +  ++TVGTVH+LQGAER++VIFS+VY
Sbjct  877   KSLHEVVGIVTPFSAQVSTIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVY  936

Query  950   SKHADGGFIDQRTSMLNVAVSRAKNTFLVFGDMDVFTAAPKSRPRGLLAHYLFKDASNAL  1009
             SKH DGGFID   SMLNVAVSRAK++FLVFGDMD+F   P S PRGLLA YLF    NAL
Sbjct  937   SKHEDGGFIDSDNSMLNVAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNAL  996

Query  1010  CFQPLVRKDLQQVSTAVEVLQDAAEHDAFLLKALNKVQREIHIVSPWINKDRIQDIGAFK  1069
              F+   RKDL+  +T +  L++  +HD FL +++++  ++I I+SPW+  +R+++ G + 
Sbjct  997   SFDYKERKDLKTAGTKIYTLHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLD  1056

Query  1070  AMQEAVKRQVQVTVYTDQDLNtddk---kdikkitkVLQAARALRGVGIEVNFVDRVHSK  1126
             +M  A  R ++VT+ TD+  NT+++   K   K  +   A   L ++GI  ++V+RVHSK
Sbjct  1057  SMIAACSRGINVTIVTDRSYNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSK  1116

Query  1127  MVIGDDEVFCVGSFNWFSANRSAMYAKHETSLVYRGRGLADERQTRLNSLRQR  1179
             +VIGDD ++CVGSFNWFSA R A Y + +TS+VY G  L +E ++  NSL +R
Sbjct  1117  IVIGDDGLLCVGSFNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERR  1169

32) PD1429 in NC_004556


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  901 bits (3414),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 549/1193 (47%), Positives = 825/1193 (70%), Gaps = 38/1193 (3%)

Query  1     MQARSSAYARYWRHSLADSGTDRGVLRDAADSSFLEVSKQQLESGCVDRDIVAACFNKEA  60
             M+  + ++A YWR+SLAD+ +++G ++     +F     + + +G +D  IV+  F+ E 
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNF--THWHGIAAGRLDEAIVSKFFEGEK  58

Query  61    EQVQTVEVVIRLKVYVLLLQHGTPQRAGHPKIVTPLVTQALLARDGRIYPLARTMIPRDI  120
             ++V+TV+V++R KVY  LLQHG  + AG P IVTP+VT ALL+R+G +YP + T IPRD+
Sbjct  59    DDVETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDL  118

Query  121   LKPLVGGHFAIGTVSDQDAFLTRQPVPGIAFTGTENNADSLGDSNNADF---DRQWKQFL  177
             L PL  G F+IG +++ D + T +   +I F ++ +++   ++  +A +   +++W+Q+L
Sbjct  119   LEPLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYL  178

Query  178   AGCDRLLAEVGGGWPGAQGDYLEADYGYLTKKAAF--SSRHILALYDHLLLETTPQVPLF  235
              + +RLL  V+G+W     +Y  A+ GY+ K A    +S HIL+LYDHLL+    +VPLF
Sbjct  179   YDSERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLV-CNKDVPLF  237

Query  236   ERYASGEMAPPELCLPPHAGFSQRLAHGSDKRALSRTQRDALTHLLVARQGEILAVNGPP  295
             +R+AS E+ ++E  L+P A FS+RL+H++DK +L+++QRDAL+H+L AR+G+ILAVNGPP
Sbjct  238   NRFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPP  297

Query  296   GTGKTTLVLSVVASLWAHAALAGGEPPVIVAASTTNQAVTNIIDAFEKNFAKGEGPFAGR  355
             GTGKTTLVLS++A+ WA+AAL  +EPPVI+A+ST NQAVTNII+AF K+F++G G+ AGR
Sbjct  298   GTGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGR  357

Query  356   WLPKIKSFGALLGSADKESKTADKYHTEDFFNAVESVGYIAEAEQHYLRaaaaaFPEIPQ  415
             WLP +KSFGA + S+ + + +A KY+TEDFFN VES  Y+ +A   YL  A AAFP   +
Sbjct  358   WLPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPG--K  415

Query  416   ASFNVKGVTAALQEAIRKEAATLAAIEQAWSGLNDARDALRAELGETPATTMTQRRTQRD  475
                +   V   L+  +   +  L  ++ +W  L++ R A R  +++     + +      
Sbjct  416   ECSSPEKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAA-RELIANDIEQYLDNLNKLLS  474

Query  476   AAQAEKQVIETLITQWERYGADESLVYGLFSWLPAVAKKRMRLVRVFLNSIWPVHYPTQT  535
             + +    ++ +  T+W +Y A+ESL+Y+LFSWLPAV +KR   +++FL+       + + 
Sbjct  475   GQEQKVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQ  534

Query  536   WESIEQVDGWLSGMQRQCDDRLQEHSWAVTRGEKVLHEEQCHITTWQAALAKESALTGLM  595
             W   E ++  + G+    +         +  ++ ++  EQ  +  WQ  LA + +     
Sbjct  535   WSDPETIERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQR-LAFDLGY----  589

Query  596   EAAGQVSLADCDALADTSIRFRIFLLTTHYWEGRWLSEMQAQLPADLDGEKKKTGGTAVE  655
             E+  ++S+++ D LADT IRF  FLLTTHYWEGRWL +M +    DL++EKKK G+ +V 
Sbjct  590   EGDEELSFSQADELADTQIRFPAFLLTTHYWEGRWLMDMAS--IDDLQDEKKKKGAKGVT  647

Query  656   PRWRRRMKLTPCIVSTLFMLPKKMQVA-RRDEKNFSRNYLYDFADLLIVDEAGQVLPEVA  714
             +RW+RRMKLTPC+V T +MLP +MQ++ ++++++F ++YLYDFADLLIVDEAGQVLPEVA
Sbjct  648   ARWQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVA  707

Query  715   GASFALGKQALVIGDQLQIEPIWSIPESIDIGNLHAAELLGKEE-----DAYERLCQSGR  769
             +ASFAL+K+ALVIGD  QI PIWSI+ +ID+GN+ A  +L+        + Y  + + G+
Sbjct  708   AASFALAKKALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGK  767

Query  770   SAASGSVMQIAQRLSRYHYDPEMARGMFLYEHHRCFDEIVSYCNALCYQGKLIPKRGPKV  829
             SAASGSVM+IAQ  SRY+YDPE+ARGM+LYEH+RC+D+I++YCN+LCY+GKL+PKRG   
Sbjct  768   SAASGSVMKIAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRG---  824

Query  830   AALKNAAGKETGDGLPALGYLHVDGLCQKSSGGSRHNLYEAQTIAAWLAEHRESLQAQYG  889
                     +E ++ +PA+GYLH+DG  + +S+GSR NL EA+TIA WLAE++++++A+YG
Sbjct  825   --------REESNLMPAMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYG  876

Query  890   KPLHCIVGIVTPFGAQVRAISQACRDVGIEVGHEKDGITVGTVHALQGAERPVVIFSAVY  949
             K+LH +VGIVTPF+AQV +I Q     +I  G +  ++TVGTVH+LQGAER++VIFS+VY
Sbjct  877   KSLHEVVGIVTPFSAQVSTIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVY  936

Query  950   SKHADGGFIDQRTSMLNVAVSRAKNTFLVFGDMDVFTAAPKSRPRGLLAHYLFKDASNAL  1009
             SKH DGGFID   SMLNVAVSRAK++FLVFGDMD+F   P S PRGLLA YLF    NAL
Sbjct  937   SKHEDGGFIDSDNSMLNVAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNAL  996

Query  1010  CFQPLVRKDLQQVSTAVEVLQDAAEHDAFLLKALNKVQREIHIVSPWINKDRIQDIGAFK  1069
              F+   RKDL+  +T +  L++  +HD FL +++++  ++I I+SPW+  +R+++ G + 
Sbjct  997   SFDYKERKDLKTAGTKIYTLHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLD  1056

Query  1070  AMQEAVKRQVQVTVYTDQDLNtddk---kdikkitkVLQAARALRGVGIEVNFVDRVHSK  1126
             +M  A  R ++VT+ TD+  NT+++   K   K  +   A   L ++GI  ++V+RVHSK
Sbjct  1057  SMIAACSRGINVTIVTDRSYNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSK  1116

Query  1127  MVIGDDEVFCVGSFNWFSANRSAMYAKHETSLVYRGRGLADERQTRLNSLRQR  1179
             +VIGDD ++CVGSFNWFSA R A Y + +TS+VY G  L +E ++  NSL +R
Sbjct  1117  IVIGDDGLLCVGSFNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERR  1169

33) XF2409 in NC_002488


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  884 bits (3348),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 538/1194 (46%), Positives = 806/1194 (68%), Gaps = 42/1194 (3%)

Query  1     MQARSSAYARYWRHSLADSGTDRGVLRDAADTSFLEVSKQQLESGCVDRNIVAACFNKEG  60
             M+  + ++A YWR+SLAD+ +++G ++     +F     + + +G +D  IV+  F+ E 
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNF--THWHGIAAGRLDEAIVSKFFEGEK  58

Query  61    EQVQTVEVVIRLKVYVLLLQHGTPQRAGNPKIVTPLVTQALLGRDGRIYPLAKTMICRDI  120
             ++V+TV+V++R KVY  LLQHG  + AG P IVTP+VT ALL+R+G +YP + T I RD+
Sbjct  59    DDVETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDL  118

Query  121   LEPLAGGHFAIGTVADQDAFLTRQPVPGIAFTGTENNGDSLEESNNADF---DRQWKEFL  177
             LEPL+ G F+IG +++ D + T +   +I F ++ ++    +E  +A +   +++W+++L
Sbjct  119   LEPLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYL  178

Query  178   AGCDRLLAEVGGAWPGAQGDYLEADYGYLTKKA--AFSSRHILALYDHLLLETTPQVPLF  235
              + +RLL  V+G W     +Y  A+ GY+ K A  + +S HIL+LYDHLL+    +VPLF
Sbjct  179   YDSERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLV-CNKDVPLF  237

Query  236   ERYASGEMAPPEPCLPPHAGFSQRLAHGNNEHPLTRTQRDALTHLLVARQGEILAVNGPP  295
             +R+AS E+ ++E+ L+P A FS+RL+H+ +  PL+++QRDAL+H+L AR+G+ILAVNGPP
Sbjct  238   NRFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPP  297

Query  296   GTGKTTLVLSVVASLWAHAALAGGEPPVIVAASTTNQAVTNIIDAFGKNFAKGEGPFAGR  355
             GTGKTTLVLS++A+ WA+AAL  +EPPVI+A+ST NQAVTNII+AFGK+F++G G+ AGR
Sbjct  298   GTGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGR  357

Query  356   WLPKINSFGALLGSDDKKKKTADKYHTEDFFNAVESAGYIAEAEQHYLRaaaaaFPEIPQ  415
             WLP ++SFGA + S  +K  +A KY+TEDFFN VES  Y+ +A   YL  A AAFP   +
Sbjct  358   WLPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPG--K  415

Query  416   ASFNVKSVTAALLGKIRKEAATLADIEQAWSGLNDARDALRAELGERPATTMTQRRTQRD  475
                +   V   L G++   +  L  ++ +W  L++ R A R  +++     + +      
Sbjct  416   ECSSPEKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAA-RELIANDIEQYLDNLNKLLS  474

Query  476   AAQAEKQVIETLITQWERYAADESLVYGLFSWLPAVAKKRMRLIRVFLNSIWPVDYPTQT  535
             + +    ++ +  T+W +Y A+ESL+Y+LFSWLPAV +KR   I++FL+       + + 
Sbjct  475   GQEQKVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQ  534

Query  536   WESIEQVDGWLSEIQRQCDHRLQEHSCAVTRGEAVLDAEQCHITTWQKalaplelteaea  595
             W   E ++  +  +    ++        +  ++ ++  EQ  +  WQ+    L       
Sbjct  535   WSDPETIERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGD--  592

Query  596   aGQVSLADCDAHADTSIRFRIFLLTTHYWEGRWLSEMQAQLPGDLDAEKKKTGRTAVEPR  655
               ++S+++ D  ADT IRF  FLLTTHYWEGRWL +M +   +DL+ EKKK G  +V +R
Sbjct  593   -EELSFSQADELADTQIRFPAFLLTTHYWEGRWLMDMAS--IDDLQDEKKKKGAKGVTAR  649

Query  656   WRRRMKLTPCIVSTFFMLPKKMQVF-RSDEKSFSPHYLYDFADLLIVDEAGQVLPEVAGA  714
             W+RRMKLTPC+V T +MLP +MQ+  + +++ F   YLYDFADLLIVDEAGQVLPEVA+A
Sbjct  650   WQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAA  709

Query  715   SFALGKQALVIGDQLQIEPIWSIPKSIDIGNLQAAELLGKEE-----DAYERVCESGRSA  769
             SFAL+K+ALVIGD  QI PIWSI+ +ID+GN+ A  +L+        + Y  + + G+SA
Sbjct  710   SFALAKKALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSA  769

Query  770   ASGRVMQIAQRLSRYHYDPAMARGMFLHEHHRCFDEIVSYCNALCYQGKLIPQRGPKVAA  829
             ASG VM+IAQ  SRY+YDP +ARGM+L EH+RC+D+I++YCN+LCY+GKL+P+RG     
Sbjct  770   ASGSVMKIAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRG-----  824

Query  830   LKNAEGKETGDSLPALGYLHVDGLCQKSSGGSRYNLYEAETIAAWLAEHHESLQAQYGEP  889
                   +E ++ +PA+GYLH+DG  + +S+GSRYNL EAETIA WLAE++++++A+YG +
Sbjct  825   ------REESNLMPAMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKS  878

Query  890   LHRIVGILTPFETQARAISQACRDVGIEVGHEKDGITVGTVHALQGAERPVVIFSAVYSK  949
             LH +VGI+TPF +Q  +I Q     +I  G +  ++TVGTVH+LQGAER++VIFS+VYSK
Sbjct  879   LHEVVGIVTPFSAQVSTIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSK  938

Query  950   HADGGFIDQRASMLNVAVSRAKNTFLVFGDMDVFTAAPKSRPRGLLAHYLFKDPSNALCF  1009
             H DGGFID   SMLNVAVSRAK++FLVFGDMD+F   P S PRGLLA YLF    NAL F
Sbjct  939   HEDGGFIDSDNSMLNVAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSF  998

Query  1010  QPLVRKDLQQVSTAVEVLQDAAEHDAFLLQALNKVQREIHIVSPWINKDRIQDIGAFKAM  1069
             +   RKDL+  +T +  L++  +HD FL Q++++  ++I I+SPW+  +R+++ G + +M
Sbjct  999   DYKERKDLKTAGTKIYTLHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSM  1058

Query  1070  QEAVERQVQVTV-----Ytdqdln-tddkkdtkkIAEVLQAARALRGVGIEVHFVDRVHS  1123
               A  R ++VT+     Y  ++ +    K   +++   L+    L ++GI   +V+RVHS
Sbjct  1059  IAACSRGINVTIVTDRSYNTEHNDFEKRKEKQQNFKAALE---KLNALGIATKLVNRVHS  1115

Query  1124  KMVIGDDEVFCVGSFNWFSANRSAMYAKHETSLVYRGRGLADERQTRLNSLRQR  1177
             K+VIGDD ++CVGSFNWFSA R A Y + +TS+VY G  L +E ++  NSL +R
Sbjct  1116  KIVIGDDGLLCVGSFNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERR  1169

34) AXYL_00800 in NC_014640


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  878 bits (3327),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 531/1183 (45%), Positives = 805/1183 (69%), Gaps = 30/1183 (2%)

Query  7     AHAAAYARYWRNSLSDAELGKGALSKRHAEALEPFQWRNGKPGLIDESVVKTCFADEPED  66
              +A ++A YWRNSL+DAE GKG++ +++A+ +   +W+   +G +DE++V   F +E +D
Sbjct  3     ENALGFASYWRNSLADAESGKGSFKRKDAQNFT--HWHGIAAGRLDEAIVSKFFEGEKDD  60

Query  67    VVTVELLIRPFVYRRRVEHGVSKSDGLPEVLTPLTTPVALARDGRLFPLPGTVVPRDLLE  126
             V TV++++RP VY R ++HG  +S G P+++TP+ TP  L+R+G L+P P+T +PRDLLE
Sbjct  61    VETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE  120

Query  127   PQDKNIYTIGELAELDQFLTESGV-----PGAEDLPAALEDANEEAFVQL---WTDYLAG  178
             P  K  ++IGE+++ D++ T          ++ D  A  ++  E  +  L   W +YL +
Sbjct  121   PLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYD  180

Query  179   SNALLGQVCPDWPESGQADFARMDYGFWEKSTSIRGFSYHIRQLYDHMRSSAPTVPLFER  238
             S+ LL  V  DW E  + ++   + G+  K++   G S HI  LYDH+      VPLF+R
Sbjct  181   SERLLKSVAGDWIEKPE-QYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNR  239

Query  239   FASESELEVEPRLPANGQFAERLAHSSDKYPLAPSQREALSHFLAGKHGDILAVNGPPGT  298
             FAS      E+ L++ ++F++RL+HS+DK+PLA +QR+ALSHFL ++HGDILAVNGPPGT
Sbjct  240   FASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGT  299

Query  299   GKTTLVLSVVATLWAKAALNDDAPPVILATSTNNQAVTNILDAFEDEFAKGSGPFADRWL  358
             GKTTLVLS++AT WA+AAL+   PPVI+ATSTNNQAVTNI++AF  +F++GSG+ A+RWL
Sbjct  300   GKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWL  359

Query  359   PDIKSYGAYFPSKAAAEKLPPGKYQLKEFFEAVESEEYIERARVNYLDAANLALPELESL  418
             P++KS+GAYFPS +     ++ KYQ  +FF+ VES EY+E A + YL+ A+ A+P  E  
Sbjct  360   PELKSFGAYFPSSSRKAE-AAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECS  418

Query  419   DVDSVIAALRRRLGEHAASLARLGSAWTDCETIRQQLVKIASASPQ---EMELRLHQAKN  475
               + VI  L+ +L+  +  L RL ++W     IR     IA+   Q   +++  L    +
Sbjct  419   SPEKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARELIANDIEQYLDNLNKLLSGQEQ  478

Query  476   DFaaaeavraaWLRFLAEEHWLKSLLGFLPGIHRSRMAAAQYHILQHWPGDAPTERWRTL  535
               +   + ++ W ++ A E  + SL++ LP+++  R    Q  + +   +  + ++W   
Sbjct  479   KVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDP  538

Query  536   DDIGSDVTALFNRTKKARDE-AQKLTMNYGLVVQNLADAEARWRDLLTKLGFEGDVHQAT  594
             + I  ++ +L+N + + +    Q++     +V+++    +  W+ L   LG+EGD ++ +
Sbjct  539   ETIERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQE-WQRLAFDLGYEGD-EELS  596

Query  595   LPDVDNWSDRSVRFPIFQLAVHYWEGRWLSAISALGDLQSEKRKNGRAAMEKRWQRRMML  654
             +++ D+ +D  +RFP F L+ HYWEGRWL  +++++DLQ EK+K+G  ++  RWQRRM L
Sbjct  597   FSQADELADTQIRFPAFLLTTHYWEGRWLMDMASIDDLQDEKKKKGAKGVTARWQRRMKL  656

Query  655   TPCVVMTCFRLPAEMKTSKATAG-GFVDNYLYDFADLLIVDEAGQVLPEVAGASFALARQ  713
             TPCVVMTC+ LP++M+ S   +   F  +YLYDFADLLIVDEAGQVLPEVA+ASFALA++
Sbjct  657   TPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKK  716

Query  714   GLVIGDTLQIPPIWSIPRAVDVGNLHEAGLLDRAG--DTAAAYELLATKGKLAASGSVMR  771
             +LVIGDT QIPPIWSI+ A+DVGN+    +L  +   + +  Y  +A  GK AASGSVM+
Sbjct  717   ALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMK  776

Query  772   VAQVASRWHSAPDMARGMFLSEHRRCFDEIISYSNRLCYHGKLIPMRGLRLRRSPEEEQA  831
             +AQ ASR +  P++ARGM+L EHRRC+D+II+Y N LCYHGKL+P RG        EE  
Sbjct  777   IAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRG-------REESN  829

Query  832   LPLPSMGYLHIDGIAVKGNGGSRCNQLEADTIAAWLAEHRERLEARYGKPLSQVVGVISP  891
             L +P+MGYLHIDG +  +++GSR N LEA+TIA WLAE+++ +EA+YGK+L +VVG+++P
Sbjct  830   L-MPAMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTP  888

Query  892   FAGQVRAIRQACQQRGIAVEGDD-GLTIGTVHALQGAARPVVLFSPVYSKHADGQFIDKD  950
             F++QV +I+Q   +++I+   ++ +LT+GTVH+LQGA R++V+FSPVYSKH DG FID D
Sbjct  889   FSAQVSTIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSD  948

Query  951   PSLLNVAVSRAKDAFLVFGDMDVLSLAASTTPRGLLADMLFAEGTNALEFATPARADLTT  1010
              S+LNVAVSRAKD+FLVFGDMD++ + ++++PRGLLA  LF    NAL F    R DL T
Sbjct  949   NSMLNVAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKT  1008

Query  1011  VGTSLQQLLDAPEHDPYLKMVLQNAKLEVHIVTPWIRPGCMEEAGALEAMADAVRRGVQV  1070
              GT +  L +  +HD +L+  ++N+  ++ I++PW+    +E++G L++M  A  RG++V
Sbjct  1009  AGTKIYTLHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINV  1068

Query  1071  KVYADGFSNTHDQDSSRRKVKQLDFDQQLAKLSQHGVEPVVVNRVHSKLVIADGTYYCVG  1130
              + +D   NT+++D  +RK KQ +F   L KL+  G+   +VNRVHSK+VI+D+   CVG
Sbjct  1069  TIVTDRSYNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVG  1128

Query  1131  SFNWFSAQRDPRYARSESSLAYLGSGLKKEIEVQLQNLSRRAV  1173
             SFNWFSA R++RY R ++S+ Y G  LK EIE   ++L RR V
Sbjct  1129  SFNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

35) Fraau_1932 in NC_017033


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  844 bits (3195),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 533/1182 (46%), Positives = 820/1182 (70%), Gaps = 29/1182 (2%)

Query  2     MNEHSLKLAGYWRNSLADADNDRGALSRPQAEKLARLPAEAIRQGQLEADMVRRLFEREP  61
             M+E++L +A+YWRNSLADA++++G++ R +A+++++   ++I  G+L+  +V ++FE E 
Sbjct  1     MDENALGFASYWRNSLADAESGKGSFKRKDAQNFTHW--HGIAAGRLDEAIVSKFFEGEK  58

Query  62    DSLSSVNLSLRPWIYPARSEHGQTRT-GRPAIITPVVCRVTASRDGRLYPSARAMVPRDL  120
             D + +V++ LRP +Y    +HG+ R+ G P I+TP+V     SR+G LYP++ + +PRDL
Sbjct  59    DDVETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDL  118

Query  121   LEPLEHDSFSIGRQEAMDHFLSNHatpafa-apaaGSTVDPEQHR--------QQWSDYL  171
             LEPL  ++FSIG     D + + H+T ++    + + T + +++R        Q+W +YL
Sbjct  119   LEPLPKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYL  178

Query  172   DFCQQMLRTVSQNWPPEDDGYDLADYGYIFKQDQAEGFNRHIINLYDHLRAGPREAPLFD  231
                +++L++V+ +W    + Y+LA+ GYI K  Q+ G + HI++LYDHL    ++ PLF+
Sbjct  179   YDSERLLKSVAGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFN  238

Query  232   RYAQQAQTPDEPCLAPNSQFANRLAHASDRFALAPAQRDALSHLLVAGHGDILAVNGPPG  291
             R+A +   + E+ LAP ++F++RL+H++D+F+LA AQRDALSH+L A HGDILAVNGPPG
Sbjct  239   RFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPG  298

Query  292   TGKTTLLLSAVATLWAKAALQGDEPPVIVASSTNNQAVTNIITAFGKDFARGDGPLAGRW  351
             TGKTTL+LS +AT WA+AAL+  EPPVI+A+STNNQAVTNII AFGKDF++G G++AGRW
Sbjct  299   TGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRW  358

Query  352   LPEVHSFGAYFPKTSAEAEMTRSYQTRSFFSRLESQEYLDTALPAYMAKARATWADAPPR  411
             LPE+ SFGAYFP +S  AE ++ YQT  FF+++ES+EY++ AL  Y+ KA+A+ ++    
Sbjct  359   LPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECS  418

Query  412   ELATVLQRLQEAIGARQQHLAAIEQAWVQLGYVRHAIESQLGPDPQAGIDRLETVldlra  471
                 V++ L+  ++A+ ++L  ++ +W  L+ +R A E  ++ D +  +D L+ +L  + 
Sbjct  419   SPEKVIELLHGQLAAKSEQLIRLNATWQTLSQIRAARE-LIANDIEQYLDNLNKLLSGQE  477

Query  472   gdlaaarSRQQTFRHHLAHEPLLYRLLSWLPPVADKRLRLARLQFDVDQPGLQAAD---S  528
               ++  +S +   +   A E+L+Y L+SWLP+V +KR    +L ++    +L A++    
Sbjct  478   QKVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSD  537

Query  529   LEAMEAALAGAVTKAEAAHHSALTRLEQARQWLLQRQERLTRWGQAIAVLPQSTDHRPEE  588
              E++E  + G +  AE  + +   +++ A++ +L+ Q+ +  W +    L    D   EE
Sbjct  538   PETIERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGD---EE  594

Query  589   VSLDDCDHWADTTLRFEIFLLTSHYWEGRWLQEVSENLTDIVNSRSKNGRKTLEKNWRRW  648
             +S+ + D+ ADT +RF  FLLT+HYWEGRWL +++ ++ D+ + + K+G K +   W+R+
Sbjct  595   LSFSQADELADTQIRFPAFLLTTHYWEGRWLMDMA-SIDDLQDEKKKKGAKGVTARWQRR  653

Query  649   MKLAPCVVATLFRLPGELGCKRHNGH-GFVDDYALDFADLLIVDEAGQVLPEVAGASFAL  707
             MKL+PCVV T + LPG++    H+G+  F   Y  DFADLLIVDEAGQVLPEVA+ASFAL
Sbjct  654   MKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFAL  713

Query  708   ARQALVIGDTQQIEPIWSIPPAIDIGNLVAAGLRPTSGDPEV--WYERFGQSGRSAASGS  765
             A++ALVIGDT+QI PIWSI+PAID+GN++A  + + S + E+   Y  +++ G+SAASGS
Sbjct  714   AKKALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGS  773

Query  766   VMAIAQSVSRYRYDPELARGMYLYEHRRCYDDIIDYCNALCYKGRLLPRRGPAPDEGLPP  825
             VM IAQ  SRY+YDPELARGMYLYEHRRCYD+II+YCN+LCY G+LLP+RG    + +P+
Sbjct  774   VMKIAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPA  833

Query  826   LAYVHVDGCCETGTHGSRRNRLEaqaiaawlqanaaqllaRYKLPLHEIVGVITPFGAQT  885
             ++Y+H+DG  E ++ GSR N LEA++IA WL  N  ++ A+Y  +LHE+VG++TPF+AQ 
Sbjct  834   MGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQV  893

Query  886   QAIEQAFTATGISAGKAPGQLTVGTVHAFQGGERPVIIFSAVYSKHADGGFIDRNNSMLN  945
              +I Q +   +IS+G     LTVGTVH++QG+ER+++IFS+VYSKH DGGFID +NSMLN
Sbjct  894   STIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLN  953

Query  946   VAVSRAKDSFIVFGDMDLFSAMPASTPRGMLMEHLAAVPGSELDFEVPARQDLQTTRTGL  1005
             VAVSRAKDSF+VFGDMDLF   PAS+PRG+L   L     + L F+   R+DL+T+ T +
Sbjct  954   VAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKI  1013

Query  1006  SHLHEAAEHDDFLRRVLQEARREIQIVTPWMRLQWIRHDHG--LEYMADAVARGVQLQIY  1063
               LH   +HD+FL + ++++ ++I I++PW  L W R ++   L+ M  A +RG+++ I 
Sbjct  1014  YTLHGVEQHDNFLNQTFENTSKHITIISPW--LTWQRLEQTGFLDSMIAACSRGINVTIV  1071

Query  1064  TDRYLNRGVSRNHPEGDPAAVEAFHQAIEALEACQIEVCQVGKVHSKLLMADDDLLCVGS  1123
             TDR  +    +N+ E      + F  A+E L+A  I    V +VHSK++++DD+LLCVGS
Sbjct  1072  TDR--SYNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGS  1129

Query  1124  FNWLSAQRAGDHVRHETSMVYRGPDVGPELTVNRHSLQQRLV  1165
             FNW+SA R +   R +TSMVY G ++  E+    +SL++R V
Sbjct  1130  FNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

36) Shew185_1979 in NC_009665


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  789 bits (2987),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 515/1181 (44%), Positives = 775/1181 (66%), Gaps = 37/1181 (3%)

Query  5     SSLPWASYWRNSLADAESGKGALKASECKSFLKVGRGVRQTGKLPIELVEKLFKDAAKEI  64
             ++L  ASYWRNSLADAESGKG++K  + ++F    +    +G+L   +V K+F +   ++
Sbjct  4     NALGFASYWRNSLADAESGKGSFKRKDAQNF--THWHGIAAGRLDEAIVSKFFEGEKDDV  61

Query  65    NTVNIIYRPNVLILTLQHGKTFEGSLPARLTALACPMWVNRQGYLFPSGPAVVPRDLLAP  124
             +TV++I RP+V +  LQHGK   ++ P  +T++  P  ++R+G+L+P+ ++ +PRDLL P
Sbjct  62    ETVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEP  121

Query  125   QDDIKFIVGCVTDLDKHLTTHQLKTFSAD--------QVPDEVGDDQLADMKQDWQAFID  176
                  F +G + + DK  TTH   TFS +           DE  + + A ++Q+W+ ++ 
Sbjct  122   LPKGAFSIGEIGQYDKYKTTH--TTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLY  179

Query  177   HCSLLYRNVCKKLASPDIQDVYSVADYSWLEPVDLVSGMSAKILELYDKITSVKPFIPLF  236
             +   L ++V       +  + Y +A+ + +      +G S+ IL LYD +   +  +PLF
Sbjct  180   DSERLLKSVAGDWI--EKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLF  237

Query  237   DSYATVSNLSHQPCIDFSQSVSQRLGHSSDKYCLADAQRDALSHSLAMGHGDILAVNGPP  296
             + +A+    + ++ +  +   S+RLGHS+DK+ LA AQRDALSH L   HGDILAVNGPP
Sbjct  238   NRFASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPP  297

Query  297   GTGKTTYLLSVVASLWVKAALEQSKPPVIVAASTNNQAVTNIIDAFGKDFSEGEGALSGR  356
             GTGKTT +LS++A+ W +AALE+S PPVI+A+STNNQAVTNII+AFGKDFS+G GA++GR
Sbjct  298   GTGKTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGR  357

Query  357   WLPDITSYGAYFPSKSRLEEAEKSFQTQTFFAEIEDADYLERAEHYFLQHAMQYFNSDSV  416
             WLP++ S+GAYFPS SR  EA K +QT+ FF ++E  +Y+E A  ++L+ A   F +   
Sbjct  358   WLPELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKEC  417

Query  417   LALVDIKERLHKELLQCQSTLKRIESLWLELCEVNALVLEVIGANSESHLAELKVASQQY  476
              +   + E LH +L      L R+++ W  L ++ A   E+I+ + E  L +L+      
Sbjct  418   SSPEKVIELLHGQLAAKSEQLIRLNATWQTLSQIRA-ARELIANDIEQYLDNLNKLLSGQ  476

Query  477   EQKSTVIRGVLKQWQYFLANESIWLSLFSWLKPVRNIRNRQRELNIATLNDDLSALFT--  534
             EQK T++++   +W+ + A ES+  SLFSWL +VRN R+ Q +L    L+D L+AL++  
Sbjct  477   EQKVTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQL---FLEDKLGALIAGN  533

Query  535   --HASPDFEQAESGLKKAIQECEHRYQKLLQEYQSKKQLLDKRNEVQARWQALACSIGLE  592
                 +  +E+   GL ++ +  +  Y+   Q+ +S  +++ K ++    WQ LA  +G E
Sbjct  534   QWSDPETIERNIDGLLNSAEREQTTYR---QQIDSAHEIVLKEQQAVQEWQRLAFDLGYE  590

Query  593   KNTWCDLDVVDKKADTAIRFLMFRLAVHYWEACWLVAGRELGDELNKIKSKTGRKTVEPR  652
              +    +   D  ADT IRF  F L+ HYWE+ WL+    + D+L+  K K G K V +R
Sbjct  591   GDEELSFSQADELADTQIRFPAFLLTTHYWEGRWLMDMASI-DDLQDEKKKKGAKGVTAR  649

Query  653   WHRRMMLTPCIVSTFHALPAHMTCSAFNNG-KFDPEYLFDFIDLLVVDEGGQVSPDVAGA  711
             W+RRM LTPC+V T   LP++M  S  +   KF+  YL+DF DLL+VDE+GQV P+VA+A
Sbjct  650   WQRRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAA  709

Query  712   SFSLAKKSLVIGDIHQIEPVRSVSGSIDIGNLFNVNLL------EKRQDYEIVQVNGRSV  765
             SF+LAKK+LVIGD +QI P++S++ +ID+GN++  ++L      E  + Y  +   G+S 
Sbjct  710   SFALAKKALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSA  769

Query  766   VNGSVMHIAQATSQYCYQAGMESGMYLREHRRCFDDIISFCNELCYKGILEPKRGVSSAA  825
              +GSVM IAQ +S+Y Y++ +  GMYL EHRRC+D+II++CN LCY G L PKRG   + 
Sbjct  770   ASGSVMKIAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESN  829

Query  826   LFPAFGHLHIDGRAEQQIGGSRFNRLEAETIADWLAQNKAILESQYNKPLEDIVGIVTPF  885
             L PA G LHIDG++E   +GSR+N LEAETIA WLA+N+  +E++Y K+L+++VGIVTPF
Sbjct  830   LMPAMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPF  889

Query  886   SAQVSELQQACKLQGIETGKQQGQLTIGTVHALQGAERIIVIFSPVYTRHSNGEFIDSST  945
             SAQVS ++Q    Q+I TG ++  LT+GTVH+LQGAER IVIFSPVY++H +G FIDS  
Sbjct  890   SAQVSTIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDN  949

Query  946   SMLNVAISRAKDSFLVFGDLDVISAAPSSSPRGILAKYLFSKPENELVFKVNKRRDLLTF  1005
             SMLNVA+SRAKDSFLVFGD+D++   P+SSPRG+LAKYLF    N L F  + R+DL T 
Sbjct  950   SMLNVAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTA  1009

Query  1006  CAEPRLINDAQEHDQYLIELLERVKVTIAIVSPWISYQKLIDTGILASICEAISRGVKIT  1065
              +    +++ ++HD++L + +E     I+I+SPW++ Q+L +TG+L S+  A SRG+++T
Sbjct  1010  GTKIYTLHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVT  1069

Query  1066  LFTDRHFNTTTNNDFDVDKEK--KFIQCCEKLADEGVEVAVIRGIHSKLVMADNHHMSVG  1123
             + TDR +N T +NDF+  KEK  +F    EKL   G+   ++  +HSK+V++D+  + VG
Sbjct  1070  IVTDRSYN-TEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVG  1128

Query  1124  SFNWFSAARAGVYANIETSMIYTGD-LRKEINIQTTFLNSR  1163
             SFNWFSA+R + Y   +TSM+Y GD L+ EI+     L+ R
Sbjct  1129  SFNWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERR  1169

37) PCNPT3_07920 in NC_020802


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  774 bits (2928),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 501/1166 (43%), Positives = 764/1166 (66%), Gaps = 33/1166 (2%)

Query  7     ATYWRNSLADADSSKGILTKKDIASFTQVNRDIRKTGKLDVDSVDKMFADEDKKTTVVKV  66
             A+YWRNSLADA+S+KG + +KD  +FT+  ++   +G+LD   V K F +E      V V
Sbjct  9     ASYWRNSLADAESGKGSFKRKDAQNFTH--WHGIAAGRLDEAIVSKFFEGEKDDVETVDV  66

Query  67    IYRPNIKTLKLIHGNSQKGIYPATFTALICPLWVNRAGLLFPAGPVTVPRDLLSPLDNSQ  126
             I RP++    L HG+ + +  P   T+++ P  ++R G+L+P+ + ++PRDLL PL ++ 
Sbjct  67    ILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGA  126

Query  127   LALGSVDALDDFLTNSTLMVLAEGEVPDKADKAQLLQQ------EDNWTNYIQHCVDLYR  180
             +++G ++  D + T  T   +  ++  DK+  ++  ++      +++W +Y+ +   L +
Sbjct  127   FSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYDSERLLK  186

Query  181   TICTKDDDSELNELYTLLEYSWVVKSDQSTGMSKKILELYDAIISKKPELPLFESYAKRQ  240
             ++   +D  E  E Y L E + +VK+ QS G S  IL LYD ++  + ++PLF+ +A R+
Sbjct  187   SVA--GDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRFASRE  244

Query  241   ISNFDDCIKPEKSISIRNGHSSDSYALADAQRDALTQALCMQEGDILAVNGPPGTGKTTY  300
             +   +  + P   +S R GHS+D ++LA AQRDAL++ L  ++GDILAVNGPPGTGKTT 
Sbjct  245   VHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTGKTTL  304

Query  301   VLSVVASMWVDAALKQTSAPVIFAASTNNQAVTNIIDAFGKDFSEGKGPLSGRWLPDVKS  360
             VLS++A+ W  AAL ++ +PVI+A+STNNQAVTNII+AFGKDFS+G G+++GRWLP++KS
Sbjct  305   VLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLPELKS  364

Query  361   YGAYFPSKSRQEEAQKKFQTKAFFEAVEDSDYLESAEHFFLECAKKM--TDACSI-DAVR  417
             +GAYFPS SR+ EA KK+QT  FF+ VE  +Y+E A  F+LE AK       CS  + V 
Sbjct  365   FGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSPEKVI  424

Query  418   KFLHLQLSTCQSQLEDIETSWSELCVIREQVLAEMGETPELTIKELECSLLDAEALSQKT  477
              +LH QL++   QL  ++++W  L  IR      +++  E  + +L+  L + E      
Sbjct  425   ELLHGQLAAKSEQLIRLNATWQTLSQIRAAR-ELIANDIEQYLDNLNKLLSGQEQKVTLL  483

Query  478   SSERKKWKQFLASESFWLNTFSWMKSIRRKRDLYRELFISDHLSKDILDLVDNLETENIE  537
              S +  WK++ A+ES+  + FSW+ ++R KR+   +LF+ D L+  ++   +  + E IE
Sbjct  484   KSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLG-ALIAGNQWSDPETIE  542

Query  538   TLLKNYQEKVDRQSQSLSSVYNQKKALLVNQKEIEDCWATLAKSLDISTDKP-SFDVVDK  596
               +    +  +R+  +     +    +++++++  + W  LA  L+   D   SF   D 
Sbjct  543   RNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQADE  602

Query  597   QADIKIRFVMFRLAVHYWEASWLIENKKIGKDLNGLKKKTGKSTVISRWQRRMMLTPCIV  656
              AD +IRF  F L+ HYWE+ WL++   I+ DL++ KKK G   V +RWQRRM LTPC+V
Sbjct  603   LADTQIRFPAFLLTTHYWEGRWLMDMASID-DLQDEKKKKGAKGVTARWQRRMKLTPCVV  661

Query  657   STFHSLPALIAGTAFNDG-NFEEEHIFNFIDLLIVDEAGQVSPEVAGGAFSLAKKSLVIG  715
              T   LP+ +  +  ++  +FE   +++F DLLIVDEAGQV PEVA+++F+LAKK+LVIG
Sbjct  662   MTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVIG  721

Query  716   DIHQIEPVRSITGAIDIGNLFSQNLITQR------DDYEAVLKNGRSVVNGSVMHIAQAA  769
             D +QI P++SI+ AID+GN++++++++        + Y A+   G+S  +GSVM IAQ A
Sbjct  722   DTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQFA  781

Query  770   SRFQYQDEMESGMYLREHRRCFDEIIMFCNDLCYQGVLLPMRGKASNDALYPAFGYLHID  829
             SR+QY+ E+  GMYL EHRRC+D+II +CN LCY+G LLP RG+  ++ L PA GYLHID
Sbjct  782   SRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESN-LMPAMGYLHID  840

Query  830   GKAEQQAGGSRFNALEADTIANWLEKNREKIELKYGGEKQLKLENIVGVVTPFKAQVNQI  889
             GK+E  ++GSR+N LEA+TIA WL  N+++IE  YG      L+++VG+VTPF AQV+ I
Sbjct  841   GKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGK----SLHEVVGIVTPFSAQVSTI  896

Query  890   EKQCEKYGIKVGKNADELTVGTVHALQGAERQLIIFSPVYTRHNNGSFIDSSQSMLNVAV  949
              +   K +I  G N   LTVGTVH+LQGAER ++IFSPVY++H++G+FIDS +SMLNVAV
Sbjct  897   KQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAV  956

Query  950   SRAKDSFLVFGDMDIMSASASTEPRGILAKYLFEKEGNELFFSTKSRSDLLDLCGEPKLI  1009
             SRAKDSFLVFGDMD+    +++ PRG+LAKYLFE E N L F  K R DL         +
Sbjct  957   SRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTL  1016

Query  1010  HNAKEHDEYIIELLGEVKTQVTIVSPWVQLEKLDSTGILHSIKATLARGVTVNLYTDRHF  1069
             H   +HD+++ + + +   ++TI+SPW+  ++L+ TG+L+S+ A+ +RG+ V + TDR +
Sbjct  1017  HGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSY  1076

Query  1070  NTTTHNKFDAKKEK--IFVSFCEYLALLGVCVSVIKGVHSKIIMADDCHISVGSFNWFSA  1127
             N T HN F+ +KEK   F +  E L  LG+   +++ VHSKI+++DD  + VGSFNWFSA
Sbjct  1077  N-TEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSA  1135

Query  1128  ARSGVYANIETSLVYTG-ALKNEIRA  1152
             +R + Y   +TS+VY G  LK EI A
Sbjct  1136  TREARYERYDTSMVYCGDNLKGEIEA  1161

38) Sden_1238 in NC_007954


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  765 bits (2894),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 495/1171 (43%), Positives = 770/1171 (66%), Gaps = 27/1171 (2%)

Query  10    ASYWRNSLADAESGKGALRASECESFLKVDRDVRQTGVLPKTSVEQLFKGVAKEINAVNV  69
             ASYWRNSLADAESGKG+++  + ++F   +++   +G L  + V ++F G   ++++V+V
Sbjct  9     ASYWRNSLADAESGKGSFKRKDAQNF--THWHGIAAGRLDEAIVSKFFEGEKDDVETVDV  66

Query  70    IYRPNVLVLTLQHGKSHQGSLPEILTALACPMWVNRQGYLFPSGPAVVPRDLLHPQDDIK  129
             I RP+V    LQHGK + ++ P+I+T++  P  ++R+G+L+P+ ++ +PRDLL+P     
Sbjct  67    ILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGA  126

Query  130   FTVGCVADLDAHLTTHQL------KTFTkdqvhdqvdddkLADFKKDWLAFIEHCSLLYQ  183
             F++G +++ D   TTH         +  K    D+  + + A ++++W  ++ +   L +
Sbjct  127   FSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYDSERLLK  186

Query  184   NVCKALGLTDIQDFYSIANYSWIQAVDTVSGMSVNILKLYDSITSIKPELALFYSYSTVS  243
             +V    +  +  + Y +A+ + I      +G S +IL LYD +   + +++LF  +++  
Sbjct  187   SVAG--DWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRFASRE  244

Query  244   NVNHKPCMDFSESVSLRLGHSSDKYCLADAQRDALSHSLAMNNGDILAVNGPPGTGKTTY  303
                  + +  +   S RLGHS+DK+ LA AQRDALSH L   +GDILAVNGPPGTGKTT 
Sbjct  245   VHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTGKTTL  304

Query  304   LLSVVASLWVKAALEQSKPPVIVAASTNNQTVTNIIDAFGKDFSEGEGTLSGRWLPDITS  363
             +LS++A+ W +AALE+S PPVI+A+STNNQ+VTNII+AFGKDFS+G G+++GRWLP++ S
Sbjct  305   VLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLPELKS  364

Query  364   YGAYFPSPSRLAEAQKSFQTQSFFAEIEDLDYLERAEHYFLQQAILYFNSDAVLVLVDIK  423
             +GAYFPS+SR AEA K +QT+ FF ++E  +Y+E A  ++L++A   F +        + 
Sbjct  365   FGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSPEKVI  424

Query  424   ARLHKELLQCQSSLKRIESLWSELCKANALILAMIGTEPESQLAELKAASHQHKQQSTDI  483
               LH +L      L R+++ W  L +  A    +I+ + E  L +L+     + Q+ T +
Sbjct  425   ELLHGQLAAKSEQLIRLNATWQTLSQIRA-ARELIANDIEQYLDNLNKLLSGQEQKVTLL  483

Query  484   KSALKQWQYFLANESIWLSLFSWLKPVRDKKNRQRELYIATFSDDIRSLVALAS-PDFEL  542
             KSA  +W+ + A ES+  SLFSWL +VR+K++ Q +L++    D + +L+A    +D E 
Sbjct  484   KSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLE---DKLGALIAGNQWSDPET  540

Query  543   AESEFKKAIqqqdqthqrllqEYQDKKQLLEKRNEVQAHWQALACSIGLEKDALYDLNAV  602
              E ++   ++  ++ +    Q+ +   +++ K ++   +WQ LA  +G E D    ++  
Sbjct  541   IERNIDGLLNSAEREQTTYRQQIDSAHEIVLKEQQAVQEWQRLAFDLGYEGDEELSFSQA  600

Query  603   DKKADTAIRFVMFRLAVHYWEACWLIEGRKLGDELNKIKGKTGRKTVVPRWHRRMMLTPC  662
             D  ADT IRF  F L+ HYWE+ WL++   + D+L+  K K G K V +RW+RRM LTPC
Sbjct  601   DELADTQIRFPAFLLTTHYWEGRWLMDMASI-DDLQDEKKKKGAKGVTARWQRRMKLTPC  659

Query  663   IVSTFHALPAHMTCSAFNDG-KFDPEYLFDFIDLLVVDEGGQVSPDVAGASFSLAKKSLV  721
             +V T   LP++M  S  ++  KF+  YL+DF DLL+VDE+GQV P+VA+ASF+LAKK+LV
Sbjct  660   VVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALV  719

Query  722   IGDIHQIEPVRSVSGSIDIGNLFNANLL------EKRQDYEAVQANGRSVVNGSVMHIAQ  775
             IGD +QI P++S++ +ID+GN++  ++L      E  + Y A+   G+S  +GSVM IAQ
Sbjct  720   IGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIAQ  779

Query  776   AASQYCYQAEMEPGMYLREHRRCFDDIIKFCNELCYKGVLEPKRGDAADALFPAFGHLHI  835
              AS+Y Y++E+  GMYL EHRRC+D+II +CN LCY G L PKRG     L PA G LHI
Sbjct  780   FASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGREESNLMPAMGYLHI  839

Query  836   DGRAEQQMGGSRFNRLEAETIADWLAQNKTKLESRYNKPLEDIVGIVTPFSAQVNELQQA  895
             DG++E   +GSR+N LEAETIA WLA+N+ ++E++Y K+L+++VGIVTPFSAQV+ ++Q 
Sbjct  840   DGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVSTIKQV  899

Query  896   CKNKGIESGKQQGQLTIGTVHALQGAERIIVIFSPVYTRHSNGEFIDRSTSMLNVAISRA  955
               +++I +G ++  LT+GTVH+LQGAER IVIFSPVY++H +G FID   SMLNVA+SRA
Sbjct  900   LGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVAVSRA  959

Query  956   KDSFLVFGDLDVISAASSTLPRGILAKYLFSKPENELVFKINKRRDLLTFCAEPRLINDA  1015
             KDSFLVFGD+D++   +++ PRG+LAKYLF    N L F  + R+DL T  +    +++ 
Sbjct  960   KDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYTLHGV  1019

Query  1016  LEHDQYLIELLEQVKETIYIVSPWVSYLKLMETGILSSICEASSRGVKIKLFTDRHFNTT  1075
              +HD++L + +E+    I I+SPW++  +L +TG+L S+  A SRG+++ + TDR +NT 
Sbjct  1020  EQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRSYNTE  1079

Query  1076  INNHFDAEKEKM--FIQCCEKLADEGVDVAVIRGVHSKLVMADNHHMSVGSFNWFSASRS  1133
              +N+F+  KEK   F    EKL   G+   ++  VHSK+V++D+  + VGSFNWFSA+R 
Sbjct  1080  -HNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATRE  1138

Query  1134  GIYANMETSMIYSGD-LRKEINTQTAFLNSR  1163
             + Y   +TSM+Y GD L+ EI++    L+ R
Sbjct  1139  ARYERYDTSMVYCGDNLKGEIEAIYNSLERR  1169

39) VPBB_A0402 in NC_019971


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  719 bits (2718),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 492/1179 (42%), Positives = 768/1179 (66%), Gaps = 37/1179 (3%)

Query  5     GWIHYWRNSLADADSAKGALKKQDLKNYVRTTTDEFKEGKLKPDSTLLEDLFRNEADTLT  64
             G   YWRNSLADA+S+KG++K++D +N+ +   + +  G+L  D +++  +F  E D + 
Sbjct  7     GFASYWRNSLADAESGKGSFKRKDAQNFTHW--HGIAAGRL--DEAIVSKFFEGEKDDVE  62

Query  65    AVQIHHRPVTYYLRKVHGKDYSGNMPGVLTPIVCSLWVNREGLLFPNTTPFIPRDLLAPQ  124
             +V++  RP  Y+    HGKD S+  P+++TPIV +  ++REG+L+P  +  IPRDLL P 
Sbjct  63    TVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPL  122

Query  125   GNDTFTIADVDKLDEFLTTN-----EIPAQSTESIPAKFEQEEQYQNHQKDWHNYYGLTQ  179
              +++F+I+++++ D + TT+     ++      +  +  E+E +Y   Q++W++Y   ++
Sbjct  123   PKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYDSE  182

Query  180   KLFADYCDR--NRIKQFYEHIESRGLVNKISECLGASRHILKLYDNLSNSSTALPLLDSY  237
             +L+    +   ++  Q+  ++  +G + K ++  GAS HIL LYD+L   +  +PL++ +
Sbjct  183   RLLKSVAGDWIEKPEQY--ELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  238   AVKTVTNHDECIDVSQTVSSRFGHSNSQFPLAKAQCDALAHTLAMQEGDILAVNGPPGTG  297
             A + V   +  +  +   S R+GHS  +FPLAKAQ DAL+H L  ++GDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  298   KTTFVLSVVASLWIESALKESQPPLIIAASTNNQAVTNIIDAFGKDFDEGDDELSGRWLP  357
             KTT+VLS++A+ W  +AL  S+PP+IIA+STNNQAVTNII+AFGKDF +G + ++GRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  358   DIFSYGGYLPSAYGELEAAKSYQTKHFYEKVEQLDFLDQAQAHYLDRAKQAFPQQNFADV  417
             ++ S+G+Y+PS+    EAAK YQT +F+++VE  +++++A   YL++AK AFP ++ +  
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  418   TQVKAYLLAELRQHQNQLDHIQNNWHHYNRQLNDIHSRLGNNPQQTLADQQQAVSNAQAL  477
              +V   L ++L    +QL +++  W+  + Q+   +  ++N+ +Q L + ++ +S  +  
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLS-QIRAARELIANDIEQYLDNLNKLLSGQEQK  479

Query  478   KDNAKEQLTAWRSYLGNESTWLTLFKWLPPIKNKLELQRRSFMYN----LIEHDE-EQIE  532
                 K   T W+ Y + ES   +LF WLP+++NK + Q + F+ +    LI  ++  + E
Sbjct  480   VTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPE  539

Query  533   NLSSDLFESLLkqvfsskkddfddqkNRYQSWLEQYQEFEQSQLNWLDSINNFTEDSPEQ  592
              +  ++ ++LL+     +    ++  +  +  L +    +Q+  +W     ++  ++ E+
Sbjct  540   TIERNI-DGLLNSAEREQTTYRQQIDSAHEIVLKE----QQAVQEWQRLAFDLGYEGDEE  594

Query  593   TIPQLTDIDSVLDITTRFRMFRLAVHYWEACWLLSCRDLGQELNKQARKTGLKTVRPRWQ  652
                 +++ D + D   RF  F L+ HYWE+ WL+    + ++L+ + +K G K V +RWQ
Sbjct  595   L--SFSQADELADTQIRFPAFLLTTHYWEGRWLMDMASI-DDLQDEKKKKGAKGVTARWQ  651

Query  653   RRMMLTPCIVSTFHSLPSHMTYQSHVGNNEFETDYLLNEIDLLIVDEAGQVAPEvaaasf  712
             RRM LTPC+V T   LP++M    H G+  FE  YL +  DLLIVDEAGQV PEVAAASF
Sbjct  652   RRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASF  711

Query  713   slakkalvIGDIYQIPPIRNVCSSIDRGNLKQHKVISSD------DEYTVIQEEGRSVVT  766
             +LAKKALVIGD  QIPPI+++ ++ID GN+  +K++S+       + YT I + G+S  +
Sbjct  712   ALAKKALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAAS  771

Query  767   GSVMHVAQQASRFHYMPEAEPGMFLQEHRRCYDELISYCNDLCYQGILIPKRGQATEDSL  826
             GSVM +AQ ASR++Y PE   GM+L EHRRCYD++I+YCN LCY+G L+PKRG+  E +L
Sbjct  772   GSVMKIAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGRE-ESNL  830

Query  827   YSPFSHLHVDGIAE-SFSGSRRNKLEAETIAAWLHANKVEIENYYGEPLAKCVGIITPFS  885
              ++ + LH+DG +E + SGSR N LEAETIA WL  N+ +IE  YG +L   VGI+TPFS
Sbjct  831   MPAMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFS  890

Query  886   AQVNQIKTACGEFDIKAGKGDDQLTVGTVHSLQGAERKIIIFSQVYTRHNDGGFIDMDPS  945
             AQV+ IK   G  DI +G  +  LTVGTVHSLQGAER I+IFS VY++H+DGGFID D S
Sbjct  891   AQVSTIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNS  950

Query  946   MLNVAVSRAKDAFLVFGDLDIIEAAPSSSPRGLLAKYLFTDERNELEFSVGQRPDLLQIC  1005
             MLNVAVSRAKD+FLVFGD+D++E  P+SSPRGLLAKYLF  E+N L F   +R DL    
Sbjct  951   MLNVAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAG  1010

Query  1006  GHPKLLTNAEEHDAFLSKLLREVQRKIDIVSPWLLLDKLQSTGQLELLKTALHKGVQITI  1065
                  L   E+HD FL++ + +  + I I+SPWL  ++L+ TG L+ + +A  +G+++TI
Sbjct  1011  TKIYTLHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTI  1070

Query  1066  HTDRHFNTTVAN-HPDTNKVKAFQHCCATLEQLGIVINVINGVHSKSVFADDRYMAVGSF  1124
              TDR +NT   + +   +K + F+     L+ LGI  +++N VHSK V++DD  + VGSF
Sbjct  1071  VTDRSYNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSF  1130

Query  1125  NWFSASRGGKYANIETSLIYVGE-LEKEIKTQLDFLNSR  1162
             NWFSA+R ++Y   +TS++Y G+ L  EI +  + L+ R
Sbjct  1131  NWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERR  1169

40) OAN307_c19380 in NC_020911


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  706 bits (2672),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 486/1176 (42%), Positives = 760/1176 (65%), Gaps = 59/1176 (5%)

Query  11    YWRASLADGVLGKGQFSHRDRAKYISLPAEVLKSGMLPQNLVERIFSGQDEKVKEVSVRF  70
             YWR SLAD+  GKG F ++D  ++    +  + +G L + +V ++F G+ + V  V V +
Sbjct  11    YWRNSLADAESGKGSFKRKDAQNFTHWHG--IAAGRLDEAIVSKFFEGEKDDVETVDVIL  68

Query  71    WPLVTARRTSHAAQTASRLPELVAPVVTEAKVWRDGTINPIQ-NAIARDVLTPLPQGEFS  129
             +P V  R   H+ + ++  P++V+P+VT A + R+G + P    +I+RD+L PLP+G FS
Sbjct  69    RPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPLPKGAFS  128

Query  130   VGTVEALDNFLTVSP-----LVESMN----------------VDAWQEYLSHCRKMIDAV  168
             +G +   D++ T        + +S++                 + W++YL +  +++ +V
Sbjct  129   IGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYDSERLLKSV  188

Query  169   ASGWPSNDANYDPIGSGLMEVARTASATVRQIldlydllldeepdvpllAQLALPDSSKK  228
             A++W  +  +Y+    G +  +  ++++  +IL LYD LL  + DVPL+ ++A  +    
Sbjct  189   AGDWIEKPEQYELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRFASREVHAA  248

Query  229   ASSHARTGGFTNPLGHSNDQFPMADQQRDVLVHLANAGSSQILAVNGPPGTGKTTMLLSA  288
              S  A  + F++ LGHS D+FP+A  QRD L H+ +A  ++ILAVNGPPGTGKTT++LS 
Sbjct  249   ESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTGKTTLVLSI  308

Query  289   IAGQWVQAALADGMPPVIVAASSNNQAVTNIIDAFGKDFALGEGPFSGRWLPDLKSFGMF  348
             IA QW +AAL  + PPVI+A+S+NNQAVTNII+AFGKDF+ G G+ +GRWLP+LKSFG +
Sbjct  309   IATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLPELKSFGAY  368

Query  349   LASFSREAIATKTYQTETFFNGIESEDYVMRAKGAYLTAAQQAFPSLDDPDVEGVVAALR  408
             ++S SR A A+K YQTE FFN +ES +YV  A   YL  A+ AFP+ + +  E V+  L+
Sbjct  369   FPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSPEKVIELLH  428

Query  409   GLMQKEVFKLSGIDEARTDLERHQTAASQELGNDPTSFVDGLTKTEAQCVVAHED----L  464
             G +     +L  ++ ++  L  +  AA + ++ND   ++D L K     + ++E+    L
Sbjct  429   GQLAAKSEQLIRLNATWQTLS-QIRAARELIANDIEQYLDNLNKL----LSGQEQKVTLL  483

Query  465   SGQMKAWDRHQASESGLLAFFGFFPSIARKRHLRARVALEDAGCELNLSKSRSLAD----  520
              +    W + +A+ES + ++F+ +P++  KR+ + ++ LED    L  ++ +S ++    
Sbjct  484   KSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPETIER  543

Query  521   -IDITLRAAVKAGSKARHKASSELAHAVRLLDVLRASEQKWEKAVSDLGAQPSPVSDLQD  579
              ID  L +A +  +  R++  S  AH + L +  + + Q W++   DLG +      + +
Sbjct  544   NIDGLLNSAEREQTTYRQQIDS--AHEIVLKE--QQAVQEWQRLAFDLGYEGDEELSFSQ  599

Query  580   LQRFADCNIRFRLFLLATHYWEGRWLMAMEDDLPGIVRDQKKTGRAKVLPRWQRRMMLTP  639
              + +AD +IRF  FLL+THYWEGRWLM M   + ++  ++KK G   V +RWQRRM LTP
Sbjct  600   ADELADTQIRFPAFLLTTHYWEGRWLMDM-ASIDDLQDEKKKKGAKGVTARWQRRMKLTP  658

Query  640   CAVSTFATLPGKLTYSTFSGG-NFVKQYLLNFIDLLIVDEAGQVLPEVaaasfalakraL  698
             C V T   LPG++  S   G  +F K YL +F DLLIVDEAGQVLPEVAAASFALAK+AL
Sbjct  659   CVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKAL  718

Query  699   VIGDTQQIEPISSVPKPVDIGNLQDCDLLPPTFSE---EDLSAISSRGLCTVGGSAMRLA  755
             VIGDT+QI PI S++ ++D+GN+    +L+ +  E   E  +AI+  G  + +GS M++A
Sbjct  719   VIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAASGSVMKIA  778

Query  756   QEAFGAN-PY-PDMEKGLYLFEHRRCYDEIISYCNALCYKGTLRPKRGGVPDENGFPVMG  813
             Q  F++   Y P++ +G+YL+EHRRCYD+II+YCN+LCY G L PKRG   + N  P MG
Sbjct  779   Q--FASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGR-EESNLMPAMG  835

Query  814   YLHIDGIA-ISHGGSRSNPVEAQTIAAWLAANRDDLETRYSQKLEKIVGVVTPFGRQAGE  872
             YLHIDG + ++ +GSR N +EA+TIA WLA N++++E++Y++ L+ +VG+VTPF+ Q + 
Sbjct  836   YLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFSAQVST  895

Query  873   ISNACAAQGIQVAGRQ-GMTIGTVHSLQGAERAVVIFSPVYSKHADGQFIDMSPSMLNVT  931
             I +  + Q+I  +  + ++T+GTVHSLQGAERA+VIFSPVYSKH DG FID   SMLNV+
Sbjct  896   IKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNSMLNVA  955

Query  932   VSRAKDNFLVFGDMDVFSAAPIGSPRALLAEFLFRSEDNMLDFEVAPRRDLEAGSQQLLT  991
             VSRAKD+FLVFGDMD+F   P +SPR+LLA +LF SE N L F+   R+DL +++ ++ T
Sbjct  956   VSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAGTKIYT  1015

Query  992   LSDAAEHDAFILKALASGGEHYMIVSPWVIVATMKRAGLLEAFSSAVARGATIEVFTDPQ  1051
             L +  +HD F+ +++ + + H  I+SPW+    + ++G+L++  +A +RG  + + TD  
Sbjct  1016  LHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTIVTDRS  1075

Query  1052  LNE-----ARKKNGMSNLEAAAEIFADIGVTLHTVRQVHSKILVMDNELLCIGSYNWLSA  1106
              N       ++K+   N+ AA E +  +G++   V +VHSKI++ D+ LLC+GS+NW+SA
Sbjct  1076  YNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSA  1135

Query  1107  DRHGKYARHETSFVYLGAQLQDEIETITASLEGRET  1142
              R+++Y R +TS VY G +L++EIE+I  SLE R+ 
Sbjct  1136  TREARYERYDTSMVYCGDNLKGEIEAIYNSLERRQV  1171

41) M634_24295 in NC_021821


> NC_004337_P1|3|G2|24114229|NP_708739.1|Shigella_flexneri_2a_str._301|+|1989..5504|-|SF2965|superfamily 
I DNA helicase
Length=1171

 Score =  701 bits (2651),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 491/1179 (42%), Positives = 765/1179 (65%), Gaps = 37/1179 (3%)

Query  5     GWIHYWRNSLADADSAKGALKKQYLKNYVRTTTDEFKEGKLKPDSTLLEDLFRNEPDTLT  64
             G   YWRNSLADA+S+KG++K++  +N+ +   + +  G+L  D +++  +F  E D + 
Sbjct  7     GFASYWRNSLADAESGKGSFKRKDAQNFTHW--HGIAAGRL--DEAIVSKFFEGEKDDVE  62

Query  65    AVQIHHRPVTYYLRKVHGKDYSGNMPSVLTPIVCTLWVNREGLLFPHTTPFIPRDLLAPQ  124
             +V++  RP  Y+    HGKD S+  P ++TPIV    ++REG+L+P  +  IPRDLL P 
Sbjct  63    TVDVILRPKVYFRLLQHGKDRSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLEPL  122

Query  125   GNDTFTIADVEKLDEFLTKNEIPAQSTENIPAKF-----EQEEQYQNHQKDWHNYYGLTQ  179
              +++F+I+++ + D + T +   + + ++   K      E+E +Y   Q++W++Y   ++
Sbjct  123   PKGAFSIGEIGQYDKYKTTHTTFSINFDDSVDKTAETDEEREARYAALQQEWRQYLYDSE  182

Query  180   KLFADYCDR--NRIKQFYEHIESRGLVNKISECLGASRHILKLYDNlstssttlplldsY  237
             +L+    +   ++  Q+  ++  +G + K ++  GAS HIL LYD+L   +  +PL++ +
Sbjct  183   RLLKSVAGDWIEKPEQY--ELAEHGYIVKTAQSGGASSHILSLYDHLLVCNKDVPLFNRF  240

Query  238   AAKTVTNHDECIDVSQTVNSRLGHSNSQFPLAKAQCDALAHTLAMQEGDILAVNGPPGTG  297
             A++ V   +  +  +   + RLGHS  +FPLAKAQ DAL+H L  ++GDILAVNGPPGTG
Sbjct  241   ASREVHAAESLLAPGAKFSDRLGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG  300

Query  298   KTTFVLSVVASLWIESALKESQPPLIIAASTNNQAVTNIIDAFSKDFDEGDDELSGRWLP  357
             KTT+VLS++A+ W  +AL  S+PP+IIA+STNNQAVTNII+AF+KDF +G + ++GRWLP
Sbjct  301   KTTLVLSIIATQWARAALEKSEPPVIIATSTNNQAVTNIIEAFGKDFSQGSGAMAGRWLP  360

Query  358   DIFSYGGYLPSAYGELEAAKSYQTKHFYEKVEQLDFLDQAQAHYLDRAKQAFPQQNFADV  417
             ++ S+G+Y+PS+    EAAK YQT +F+++VE  +++++A   YL++AK AFP ++ +  
Sbjct  361   ELKSFGAYFPSSSRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPGKECSSP  420

Query  418   TQVKAYLLAELRQHQNQLDHIQNNWHHYNRQLNDIHSRLGNNPQQTLADQQQAVSNAQAL  477
              +V   L ++L    +QL +++  W+  + Q+   +  ++N+ +Q L + ++ +S  +  
Sbjct  421   EKVIELLHGQLAAKSEQLIRLNATWQTLS-QIRAARELIANDIEQYLDNLNKLLSGQEQK  479

Query  478   KDNAKEQLTAWRSYLGNESTWLTLFKWLPPIKNKLELQRRSFMYN----LIEHDE-EQIE  532
                 K   T W+ Y + ES   +LF WLP+++NK + Q + F+ +    LI  ++  + E
Sbjct  480   VTLLKSAKTEWKKYRAGESLIYSLFSWLPAVRNKRQYQIQLFLEDKLGALIAGNQWSDPE  539

Query  533   NLSSDRFESLLkqvfsskkddfddqkNRYQSWLEQYQEFEQSQLNWLNSINNFTEDSPEQ  592
              +  + +++LL+     +    ++  +  +  L +    +Q+  +W     ++  ++ E+
Sbjct  540   TIERN-IDGLLNSAEREQTTYRQQIDSAHEIVLKE----QQAVQEWQRLAFDLGYEGDEE  594

Query  593   TIPQLTDIDSVLDITTRFRMFRLAVHYWEACWLLSCRDLGQELNKQARKTGLKTVRPRWQ  652
                 +++ D + D   RF  F L+ HYWE+ WL+    + ++L+ + +K G K V +RWQ
Sbjct  595   L--SFSQADELADTQIRFPAFLLTTHYWEGRWLMDMASI-DDLQDEKKKKGAKGVTARWQ  651

Query  653   RRMMLTPCIVSTFHSLPSHMTYQSHVGNNEFETDYLLNEIDLLIVDEAGQVAPEvaaasf  712
             RRM LTPC+V T   LP++M    H G+  FE  YL +  DLLIVDEAGQV PEVAAASF
Sbjct  652   RRMKLTPCVVMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASF  711

Query  713   slakkalvIGDIYQIPPIRNVCSSIDRGNLKQHKVISSD------DEYTVIQEEGRSVVT  766
             +LAKKALVIGD  QIPPI+++ ++ID GN+  +K++S+       + YT I + G+S  +
Sbjct  712   ALAKKALVIGDTEQIPPIWSIAPAIDVGNMLAEKILSGSTQEEITEKYTAIADLGKSAAS  771

Query  767   GSVMHVAQQASRFHYMPEAEPGMFLQEHRRCYDELISYCNDLCYQGILIPKRGQATEDSL  826
             GSVM +AQ ASR++Y PE   GM+L EHRRCYD++I+YCN LCY+G L+PKRG+  E +L
Sbjct  772   GSVMKIAQFASRYQYDPELARGMYLYEHRRCYDNIIGYCNTLCYHGKLLPKRGRE-ESNL  830

Query  827   YSPFSHLHVDGIAE-SFSGSRRNKLEAETIAAWLHANKVEIENYYGEPLAKCVGIITPFS  885
              ++ + LH+DG +E + SGSR N LEAETIA WL  N+ +IE  YG +L   VGI+TPFS
Sbjct  831   MPAMGYLHIDGKGELASSGSRYNLLEAETIAVWLAENQQNIEAHYGKSLHEVVGIVTPFS  890

Query  886   AQVNQIKTACGEFDIKAGKGDDQLTVGTVHSLQGAERKIIIFSQVYTRHNDGGFIDMDPS  945
             AQV+ IK   G  DI +G  +  LTVGTVHSLQGAER I+IFS VY++H+DGGFID D S
Sbjct  891   AQVSTIKQVLGKQDISTGTNEKSLTVGTVHSLQGAERAIVIFSPVYSKHEDGGFIDSDNS  950

Query  946   MLNVAVSRAKDAFLVFGDLDIIEAAPSSSPRGLLAKYLFTDERNELEFSVGQRPDLLQIC  1005
             MLNVAVSRAKD+FLVFGD+D++E  P+SSPRGLLAKYLF  E+N L F   +R DL    
Sbjct  951   MLNVAVSRAKDSFLVFGDMDLFEVQPASSPRGLLAKYLFESEKNALSFDYKERKDLKTAG  1010

Query  1006  GHPKLLTNAEEHDAFLSKLLREVQRKIDIVSPWLLLDKLQSTGQLELLKTALHKGVQITI  1065
                  L   E+HD FL++ + +  + I I+SPWL  ++L+ TG L+ + +A  +G+++TI
Sbjct  1011  TKIYTLHGVEQHDNFLNQTFENTSKHITIISPWLTWQRLEQTGFLDSMIAACSRGINVTI  1070

Query  1066  HTDRHFNTTVAN-HPDTNKVKAFQHCCATLEQLGIVINVINGVHSKSVFADDRYMAVGSF  1124
              TDR +NT   + +   +K + F+     L+ LGI  +++N VHSK V++DD  + VGSF
Sbjct  1071  VTDRSYNTEHNDFEKRKEKQQNFKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSF  1130

Query  1125  NWFSASRSGKYANIETSLIYVGE-LEKEIKTQLNFLNSR  1162
             NWFSA+R ++Y   +TS++Y G+ L  EI +  N L+ R
Sbjct  1131  NWFSATREARYERYDTSMVYCGDNLKGEIEAIYNSLERR  1169