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Homologs of hrpF gene of NC_003919_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpF
( NP_640749.1 )

HrpF protein

NC_003919
(Xanthomonas axonopodis 306)

0.0

100

2) hrpF
( YP_007648817.1 )

HrpF protein

NC_020815
(Xanthomonas citri Aw12879)

0.0

100

3) XAC29_02025
( YP_007634898.1 )

HrpF protein

NC_020800
(Xanthomonas axonopodis Xac29-1)

0.0

4) hrpF
( YP_362142.1 )

HrpF protein

NC_007508
(Xanthomonas campestris 85-10)

0.0

5) hrpF
( YP_005630689.1 )

type III secretion translocon protein HrpF

NC_017267
(Xanthomonas oryzae BLS256)

0.0

6) hrpF
( YP_004849989.1 )

HrpF protein

NC_016010
(Xanthomonas axonopodis F1)

0.0

7) hrpF
( YP_198705.1 )

HrpF protein

NC_006834
(Xanthomonas oryzae KACC10331)

0.0

8) XOO_0109
( YP_449138.1 )

HrpF protein

NC_007705
(Xanthomonas oryzae MAFF 311018)

0.0

9) hrpF
( YP_001911263.1 )

HrpF/NolX/HrpK

NC_010717
(Xanthomonas oryzae PXO99A)

0.0

10) XC_3025
( YP_244093.1 )

HrpF protein

NC_007086
(Xanthomonas campestris 8004)

0.0

11) hrpF
( NP_636591.1 )

HrpF protein

NC_003902
(Xanthomonas campestris ATCC 33913)

0.0

12) hrpF
( YP_001904493.1 )

type III secretion system host membrane insertion protein

NC_010688
(Xanthomonas campestris B100)

0.0

13) XCR_1459
( YP_005636476.1 )

type III secretion translocon protein HrpF

NC_017271
(Xanthomonas campestris 756C)

0.0

14) popF2
( YP_006032712.1 )

secreted protein popf2

NC_017575
(Ralstonia solanacearum Po82)

3e-123

15) popF1
( NP_523114.1 )

hypothetical protein

NC_003296
(Ralstonia solanacearum GMI1000)

4e-119

16) F504_5021
( YP_008238746.1 )

Type III secretion translocator of effector proteins (HrpF, NolX)

NC_021745
(Ralstonia solanacearum FQY_4)

5e-119

17) popF2
( NP_522461.1 )

hypothetical protein

NC_003296
(Ralstonia solanacearum GMI1000)

5e-95

• Sequence Alignments

1) hrpF in NC_003919


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score = 1109 bits (4204),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 811/811 (100%), Positives = 811/811 (100%), Gaps = 0/811 (0%)

Query  1    MGAPVRPYKRKLIRRCFCQFCHCEAAHMSLNTLSTGSNPSQLLGTPLNEsdssellgsds  60
            MGAPVRPYKRKLIRRCFCQFCHCEAAHMSLNTLSTGSNPSQLLGTPLNESDSSELLGSDS
Sbjct  1    MGAPVRPYKRKLIRRCFCQFCHCEAAHMSLNTLSTGSNPSQLLGTPLNESDSSELLGSDS  60

Query  61   skddsdlpsTMDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQ  120
            SKDDSDLPSTMDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQ
Sbjct  61   SKDDSDLPSTMDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQ  120

Query  121  ANQPIEKRTSWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKD  180
            ANQPIEKRTSWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKD
Sbjct  121  ANQPIEKRTSWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKD  180

Query  181  QMPLEYKNLDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFS  240
            QMPLEYKNLDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFS
Sbjct  181  QMPLEYKNLDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFS  240

Query  241  DSHPQVKAMGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC  300
            DSHPQVKAMGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC
Sbjct  241  DSHPQVKAMGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC  300

Query  301  PLKWSDLDAKINDPSTPPDLKKALTDLQSDPRLFFAIGSQgdgkcggkikdgdlgkFVSH  360
            PLKWSDLDAKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSH
Sbjct  301  PLKWSDLDAKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSH  360

Query  361  HAQVAEYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKS  420
            HAQVAEYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKS
Sbjct  361  HAQVAEYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKS  420

Query  421  LVDGESSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQK  480
            LVDGESSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQK
Sbjct  421  LVDGESSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQK  480

Query  481  TLDTINSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQllndpllfgllnnSITG  540
            TLDTINSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITG
Sbjct  481  TLDTINSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITG  540

Query  541  YKKPHRFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLM  600
            YKKPHRFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLM
Sbjct  541  YKKPHRFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLM  600

Query  601  GkddppaikkpkkdVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIAL  660
            GKDDPPAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIAL
Sbjct  601  GKDDPPAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIAL  660

Query  661  ESEAQAAQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARIgakavakgvaeaaak  720
            ESEAQAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKAVAKGVAEAAAK
Sbjct  661  ESEAQAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKAVAKGVAEAAAK  720

Query  721  gtakgvakgagrtaaERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKE  780
            GTAKGVAKGAGRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKE
Sbjct  721  GTAKGVAKGAGRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKE  780

Query  781  GEIHQKMENAGGIPMGKQIVPTNVANNFEGD  811
            GEIHQKMENAGGIPMGKQIVPTNVANNFEGD
Sbjct  781  GEIHQKMENAGGIPMGKQIVPTNVANNFEGD  811

2) hrpF in NC_020815


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score = 1054 bits (3994),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 784/784 (100%), Positives = 784/784 (100%), Gaps = 0/784 (0%)

Query  1    MSLNTLSTGSNPSQLLGTPLNEsdssellgsdsskddsdlpsTMDDIFLLIYQLLAALQT  60
            MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQT
Sbjct  28   MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQT  87

Query  61   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  120
            NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD
Sbjct  88   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  147

Query  121  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  180
            APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ
Sbjct  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207

Query  181  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  240
            GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP
Sbjct  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267

Query  241  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDL  300
            PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDL
Sbjct  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDL  327

Query  301  QSDPRLFFAIGSQgdgkcggkikdgdlgkFVSHHAQVAEYADKQAKNYTQNYVASDSPDK  360
            QSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPDK
Sbjct  328  QSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPDK  387

Query  361  TKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHPD  420
            TKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHPD
Sbjct  388  TKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHPD  447

Query  421  QWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDSI  480
            QWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDSI
Sbjct  448  QWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDSI  507

Query  481  SKDDKADPAVKEAATQllndpllfgllnnSITGYKKPHRFFGGGHVVDSGKISQDDFRRF  540
            SKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRRF
Sbjct  508  SKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRRF  567

Query  541  YDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGkddppaikkpkkdVGVFQEGLHEFLK  600
            YDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFLK
Sbjct  568  YDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFLK  627

Query  601  WDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLAG  660
            WDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLAG
Sbjct  628  WDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLAG  687

Query  661  INMagavvgavggPTARIgakavakgvaeaaakgtakgvakgagrtaaERPSAAEFAKGY  720
            INMAGAVVGAVGGPTARIGAKAVAKGVAEAAAKGTAKGVAKGAGRTAAERPSAAEFAKGY
Sbjct  688  INMAGAVVGAVGGPTARIGAKAVAKGVAEAAAKGTAKGVAKGAGRTAAERPSAAEFAKGY  747

Query  721  VGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQIVPTNVANN  780
            VGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQIVPTNVANN
Sbjct  748  VGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQIVPTNVANN  807

Query  781  FEGD  784
            FEGD
Sbjct  808  FEGD  811

3) XAC29_02025 in NC_020800


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score = 1028 bits (3898),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 740/741 (99%), Positives = 741/741 (100%), Gaps = 0/741 (0%)

Query  1    MDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTS  60
            MDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTS
Sbjct  71   MDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTS  130

Query  61   WPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLD  120
            WPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLD
Sbjct  131  WPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLD  190

Query  121  DKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMG  180
            DKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMG
Sbjct  191  DKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMG  250

Query  181  GKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAK  240
            GKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAK
Sbjct  251  GKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAK  310

Query  241  INDPSTPPDLKKALTDLQSDPRLFFAIGSQgdgkcggkikdgdlgkFVSHHAQVAEYADK  300
            INDPSTPPDLKKALTDLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADK
Sbjct  311  INDPSTPPDLKKALTDLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADK  370

Query  301  QAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKK  360
            QAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKK
Sbjct  371  QAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKK  430

Query  361  CPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQD  420
            CPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQD
Sbjct  431  CPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQD  490

Query  421  AFYGDGKEVTRDKLDSISKDDKADPAVKEAATQllndpllfgllnnSITGYKKPHRFFGG  480
            AFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGG
Sbjct  491  AFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGG  550

Query  481  GHVVDSGKISKDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGkddppaikk  540
            GHVVDSGKIS+DDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKK
Sbjct  551  GHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKK  610

Query  541  pkkdVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVV  600
            PKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVV
Sbjct  611  PKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVV  670

Query  601  DTAIQGGDMSLALKLAGINMagavvgavggPTARIgakavakgvaeaaakgtakgvakga  660
            DTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKAVAKGVAEAAAKGTAKGVAKGA
Sbjct  671  DTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARIGAKAVAKGVAEAAAKGTAKGVAKGA  730

Query  661  grtaaERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENA  720
            GRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENA
Sbjct  731  GRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENA  790

Query  721  GGIPMGKQIVPTNVANNFEGD  741
            GGIPMGKQIVPTNVANNFEGD
Sbjct  791  GGIPMGKQIVPTNVANNFEGD  811

4) hrpF in NC_007508


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  944 bits (3575),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 658/797 (83%), Positives = 723/797 (91%), Gaps = 17/797 (2%)

Query  1    MSLNTLSTGSNPSQllgtsfnessssellgsdsskdgsdlpsTMDNIFQRIYLLLEALQA  60
            MSLNTLSTGSNPSQLLGT++NES SSELLGSDSSKD+SDLPSTMD+IF  IY LL ALQ+
Sbjct  28   MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQT  87

Query  61   NTPNSASGN----APANTASGDADTQLSASDWQATQPIEKRTSWPSLGYDFDPKHIKGKD  116
            N+P S+SGN    AP++++SGDA T  SASD QA QPIEKRTSWPSLGYDFDPK+IKGKD
Sbjct  88   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  147

Query  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  176
            APPALEGSTVTWN+GTLT SELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ
Sbjct  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207

Query  177  GLKQDPRLFFAIGSQGDGKCGGKISAQDLWDFSDSHPQVKELGGKNDEFNPKNIKGSNPP  236
            GLKQDPRLFFAIGSQGDGKCGGKI AQDLWDFSDSHPQVK +GGKND+FNPK+IKGS PP
Sbjct  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267

Query  237  PAAEGSTVTWNEGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALQG  296
            PA +GS+VTW+ G L Q+ELEIVS L+RHKDQ  +L   +LDAKINDPST PDLKKAL +
Sbjct  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC-PLKWSDLDAKINDPSTPPDLKKALTD  326

Query  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKQAKSYTQNYIASDSPD  356
            LQ DPRLFFAIGSQ DGKCGGKIK  DL  F   H+Q+AEY DKQAK+YTQNY+ASDSPD
Sbjct  327  LQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPD  386

Query  357  KTKASVMTKSDALRELYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQVIAAAQYFRDHP  416
            KTKASVM  SDA+RELYRYSDYLP++L++D F  +VDG+S T KCPPQVIAAAQYFRDHP
Sbjct  387  KTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHP  446

Query  417  DEWKEFAGDSGSMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKEITRDKLDA  476
            D+WK +AGDSGSMS PDFLQK++SE+HLTADEQKTLDTINSHQDAFYGDGKE+TRDKLD+
Sbjct  447  DQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDS  506

Query  477  ISKDDKADPAVKQAATQLLADPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQDDFRQ  536
            ISKDDKADPAVK+AATQLL DPLLFGLLNNSITGYKKPH+FFGGGHVVDSGKISQDDFR+
Sbjct  507  ISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRR  566

Query  537  FYDHMSAANKTVDTPATHEASSPDQQKAVADMLVGkddppaikkpkkdVGTFQQGLHEFL  596
            FYD+MSAANKTVD P TH+ASS++QQKAV+DML+GKDDPPAIKKPKKDVG FQ+GLHEFL
Sbjct  567  FYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFL  626

Query  597  KWDSKILDWMSVGLSALNGIPIIGEIADAASIALESEAQAAQVVDTAIQGGDMSLALKLA  656
            KWDSKILDWMSVGLSALNGIPIIGEI+DAASIALESEAQAAQVVDTAIQGGDMSLALKLA
Sbjct  627  KWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLA  686

Query  657  GINMagavvgavggPTARIgakgvakgvaeaaakeaaegaakgaakgtaksvakgggkta  716
            GINMAGAVVGAVGGPTARI            +AK  A G A +AAKGTAK+VAKG+G+TA
Sbjct  687  GINMAGAVVGAVGGPTARI------------GAKAVAKGVAEAAAKGTAKGVAKGAGRTA  734

Query  717  aERPSAAEFAKGYVGGTAISKSTEILKTPVLAGLHYEEYQLDKQKDGEIHQKMENAGGVP  776
            AERPSAAEFAKGYVGGTAISKS EILKTPVLAGLHYEEY+LDKQK+GEIHQKMENAGG+P
Sbjct  735  AERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIP  794

Query  777  VGKQIIPKGIADNFEGD  793
            +GKQI+P  +A+NFEGD
Sbjct  795  MGKQIVPTNVANNFEGD  811

5) hrpF in NC_017267


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  926 bits (3507),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 633/793 (80%), Positives = 716/793 (91%), Gaps = 13/793 (1%)

Query  1    MSLNMLSTGSNPsqllgtssnessssdlfgsdssrdgFDLPSTMDTLFQQIYLVLAALQA  60
            MSLN LSTGSNPSQLLGT+ NES SS+L+GSDSS+D+ DLPSTMD +F  IY +LAALQ+
Sbjct  28   MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQT  87

Query  61   NTQTGASG----DTPANTASGDADTQMSASDWQATQPIEKRTSWPSLDYDFDPKNIKGKD  116
            N+ T++SG    D+P++++SGDA T  SASD QA QPIEKRTSWPSL+YDFDPK+IKGKD
Sbjct  88   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  147

Query  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPPDLKAALQ  176
            APPALEGSTVTWN+GTLT SELQIVSTLNAHKDQMPLEYKNLDDKINDPSTP+DLKAALQ
Sbjct  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207

Query  177  GLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPP  236
            GLKQDPRLFFAIGSQGDGKCGGK+ AQDLWDFSDSHPQVK +GGKND+FNPKDIKGS PP
Sbjct  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267

Query  237  QAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKEALKG  296
             A +GS+VTW++G L Q+ELEIVS L+RHKDQ  +L   +LDAKINDPST PDLK AL +
Sbjct  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC-PLKWSDLDAKINDPSTPPDLKKALTD  326

Query  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPD  356
            LQ DPRLFFAIGSQ DGKCGGKIK  DL  F   H+Q+AEY DK+AK+YTQNY+ASDSPD
Sbjct  327  LQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPD  386

Query  357  KTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHP  416
            KTKASVM  SDA+RE+YRYSDYLP++L++D F  +VDG+S T KCPPQ+IAAAQYFRDHP
Sbjct  387  KTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHP  446

Query  417  DEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDA  476
            D+WK ++GD+G+MS PDFLQK++SE+HLTADEQKTLDTINSHQDAFYGDGKE+TRDKLD+
Sbjct  447  DQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDS  506

Query  477  ISKDDKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQ  536
            ISKDDKADPAVKEAATQL +DPLLFGLLNNSITGYKKPH+FFGGGHVVDSGKISQ+DFR+
Sbjct  507  ISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRR  566

Query  537  FYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGkddppaikkpkkdVGTFQQGLHEFL  596
            FYD+MSAANKTV+ P TH+ASS++QQKAV+DMLMGKDDPPAIKKPKKDVG FQ+GLHEFL
Sbjct  567  FYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFL  626

Query  597  KWDSKILDWMSVGLSALNGIPVIGEIADAASIALESEAQAAQVVDTAIQGGDMSLALKLA  656
            KWDSKILDWMSVGLSALNGIP+IGEI+DAASIALESEAQAAQVVDTAIQGGDMSLALKLA
Sbjct  627  KWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLA  686

Query  657  GINMagavvgavggPTARIgakgaakgvaevaakeaaegaakgtakgaakgagktaaeRP  716
            GINMAGAVVGAVGGPTARI         A   AK  AE+AAKGTAKG AKGAG+TAAERP
Sbjct  687  GINMAGAVVGAVGGPTARI--------GAKAVAKGVAEAAAKGTAKGVAKGAGRTAAERP  738

Query  717  SAAEFAKGYVAGSNISKSTEILKTPVMAGLHYEEYQLDKQKDGEIHQKLEHAGGVPVGKQ  776
            SAAEFAKGYV+G+ ISKS EILKTPV+AGLHYEEY+LDKQK+GEIHQK+E+AGG+P+GKQ
Sbjct  739  SAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQ  798

Query  777  IIPKGIADNFEGD  789
            I+P  +A+NFEGD
Sbjct  799  IVPTNVANNFEGD  811

6) hrpF in NC_016010


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  920 bits (3486),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 671/797 (85%), Positives = 739/797 (93%), Gaps = 13/797 (1%)

Query  1    MSLNTLSTGSNPSQllgtsfnessssellgsdsskdgsdlpsTMDDIFLLIYQLLAALQt  60
            MSLNTLSTGSNPSQLLGT++NES SSELLGSDSSKD+SDLPSTMDDIFLLIYQLLAALQT
Sbjct  28   MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQT  87

Query  61   ntptstssnasadapantpsGDASTPSSASDDQATQPIEKRTSWPSLGYDFDPKHIKGKD  120
            N+PTSTS+N+SADAP+++PSGDASTPSSASDDQA QPIEKRTSWPSLGYDFDPK+IKGKD
Sbjct  88   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  147

Query  121  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  180
            APPALEGSTVTWN+GTLT SELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ
Sbjct  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207

Query  181  GLKQDPRLFFAIGSQGDGKCGGKISAQDLWDFSDSHPQVKELGGKNDEFNPKNIKGSNPP  240
            GLKQDPRLFFAIGSQGDGKCGGKI AQDLWDFSDSHPQVK +GGKND+FNPK+IKGS PP
Sbjct  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267

Query  241  PAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALQG  300
            PA +GS+VTW++G L Q+ELEIVS L+RHKDQ  +L   +LDAKINDPST PDLKKAL +
Sbjct  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC-PLKWSDLDAKINDPSTPPDLKKALTD  326

Query  301  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKQAKSYTQNYIASDSPD  360
            LQ DPRLFFAIGSQ DGKCGGKIK  DL  F   H+Q+AEY DKQAK+YTQNY+ASDSPD
Sbjct  327  LQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPD  386

Query  361  KTKASVMTKSDALRELYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQVIAAAQYFRDHP  420
            KTKASVM  SDA+RELYRYSDYLP++L++D F  +VDG+S T KCPPQVIAAAQYFRDHP
Sbjct  387  KTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHP  446

Query  421  DEWKEFAGDSGSMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKEITRdklda  480
            D+WK +AGDSGSMS PDFLQK++SE+HLTADEQKTLDTINSHQDAFYGDGKE+TRDKLD+
Sbjct  447  DQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDS  506

Query  481  iakddkadpavkqaaTQLLADPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQDDFRQ  540
            I+KDDKADPAVK+AATQLL DPLLFGLLNNSITGYKKPH+FFGGGHVVDSGKISQDDFR+
Sbjct  507  ISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRR  566

Query  541  FYDHMSAANKTVDTPATHEASSPDQQKAVADMLVGkddppaikkpkkdVGTFQQGLHEFL  600
            FYD+MSAANKTVD P TH+ASS++QQKAV+DML+GKDDPPAIKKPKKDVG FQ+GLHEFL
Sbjct  567  FYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFL  626

Query  601  KWDSKILDWMSVGLSALNGIPIIGEIADAASIALESEAQAAQVVDTAIQGGDMSLALKLA  660
            KWDSKILDWMSVGLSALNGIPIIGEI+DAASIALESEAQAAQVVDTAIQGGDMSLALKLA
Sbjct  627  KWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLA  686

Query  661  GINMagavvgavggPTARIGARIgakgvaeaaakgaaegaakgtakgtakgvakgggkta  720
            GINMAGAVVGAVGGPTARIGA+            + A G A ++AKGTAKGVAKG+G+TA
Sbjct  687  GINMAGAVVGAVGGPTARIGAK------------AVAKGVAEAAAKGTAKGVAKGAGRTA  734

Query  721  aeRPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYQLDKQKDGQIHQKLENAGGVP  780
            AERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEY+LDKQK+G+IHQK+ENAGG+P
Sbjct  735  AERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIP  794

Query  781  VGKQIIPKGIADNFEGD  797
            +GKQI+P  +A+NFEGD
Sbjct  795  MGKQIVPTNVANNFEGD  811

7) hrpF in NC_006834


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  907 bits (3434),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 642/820 (79%), Positives = 731/820 (90%), Gaps = 13/820 (1%)

Query  26   MGGSVRPYKYKLIRRCSANSVIREAAYMSLNMLSTGSNPSQLlgtssnesssselfgsds  85
            MG++VRPYK KLIRRC  +    EAA MSLN LSTGSNPSQLLGT+ NES SSEL+GSDS
Sbjct  1    MGAPVRPYKRKLIRRCFCQFCHCEAAHMSLNTLSTGSNPSQLLGTPLNESDSSELLGSDS  60

Query  86   sndGSDLPSTMDTIF----qqiylllaalqantqtsasGDTPANTASGDADTQMSASDWQ  141
            S+D+SDLPSTMD IF    Q +  L +   ++T  ++S+D+P++++SGDA T  SASD Q
Sbjct  61   SKDDSDLPSTMDDIFLLIYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQ  120

Query  142  ATQPIEKRTSWPSLGYDFDPKNIKGKDAPPALEGSTVTWNDGTLTKSELQIVSTLNAHKD  201
            A QPIEKRTSWPSLGYDFDPK+IKGKDAPPALEGSTVTWN+GTLT SELQIVSTLNAHKD
Sbjct  121  ANQPIEKRTSWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKD  180

Query  202  QMPIEYKNLDDKINDPSTPPDLKAALQGLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFS  261
            QMP+EYKNLDDKINDPSTP+DLKAALQGLKQDPRLFFAIGSQGDGKCGGK+ AQDLWDFS
Sbjct  181  QMPLEYKNLDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFS  240

Query  262  DSHPQVKDLGGKNDEFNPKDIKGSNPPQAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQV  321
            DSHPQVK +GGKND+FNPKDIKGS PP A +GS+VTW++G L Q+ELEIVS L+RHKDQ 
Sbjct  241  DSHPQVKAMGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC  300

Query  322  DSLSFDQLDAKINDPSTQPDLKKALKGLQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSY  381
             +L   +LDAKINDPST PDLKKAL +LQ DPRLFFAIGSQ DGKCGGKIK  DL  F  
Sbjct  301  -PLKWSDLDAKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVS  359

Query  382  YHPQIAEYNDKKAKSYTQNYIASDSPDKTKASVMTKSDALREMYRYSDYLPGNLSEDEFA  441
             H+Q+AEY DK+AK+YTQNY+ASDSPDKTKASVM  SDA+RE+YRYSDYLP++L++D F 
Sbjct  360  HHAQVAEYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFK  419

Query  442  KIVDGDSKTGKCPPQLIAAAQYFRDHPDEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQ  501
             +VDG+S T KCPPQ+IAAAQYFRDHPD+WK ++GD+G+MS PDFLQK++SE+HLTADEQ
Sbjct  420  SLVDGESSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQ  479

Query  502  KTLDTINSHQDAFYGDGKELTRDKLDAISKDNKADPAVKEAATQLASDPLLFGLLNNSIT  561
            KTLDTINSHQDAFYGDGKE+TRDKLD+ISKD+KADPAVKEAATQL +DPLLFGLLNNSIT
Sbjct  480  KTLDTINSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSIT  539

Query  562  GYKKPHHFFGGGHVVDSGKISQNDFRQFYDHMSAANKTVNTPATHEASSPDQQKAVADML  621
            GYKKPH+FFGGGHVVDSGKISQ+DFR+FYD+MSAANKTV+ P TH+ASS++QQKAV+DML
Sbjct  540  GYKKPHRFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDML  599

Query  622  MGkddppaikkpkkdVGTFQQGLHEFLKWDSKILDWMSVGLSALNGIPVigeiadaaaia  681
            MGKDDPPAIKKPKKDVG FQ+GLHEFLKWDSKILDWMSVGLSALNGIP+IGEI+DAA+IA
Sbjct  600  MGKDDPPAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIA  659

Query  682  leseaqaaQVVDTAIQGGDMSLALKLAGINMagavvgavggPTARIgakgaakgvaevaa  741
            LESEAQAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI         A   A
Sbjct  660  LESEAQAAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI--------GAKAVA  711

Query  742  keaaegaakgtakgaakgagktaaeRPSAAAFAKGYVAGSTISKSTEILKKPVMAGLHYE  801
            K  AE+AAKGTAKG AKGAG+TAAERPSAA FAKGYV+G++ISKS EILK PV+AGLHYE
Sbjct  712  KGVAEAAAKGTAKGVAKGAGRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYE  771

Query  802  EYQLDKQKDGEIHQKLDNAGGAPVGRQIIPTGIADNFEGD  841
            EY+LDKQK+GEIHQK++NAGG P+G+QI+PT +A+NFEGD
Sbjct  772  EYRLDKQKEGEIHQKMENAGGIPMGKQIVPTNVANNFEGD  811

8) XOO_0109 in NC_007705


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  886 bits (3357),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 621/785 (80%), Positives = 709/785 (91%), Gaps = 9/785 (1%)

Query  1    MSLNMLSTGSNPSQLlgtssnesssselfgsdssndGSDLPSTMDTIF----qqiyllla  56
            MSLN LSTGSNPSQLLGT+ NES SSEL+GSDSS+D+SDLPSTMD IF    Q +  L +
Sbjct  28   MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQT  87

Query  57   alqantqtsasGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKD  116
               ++T  ++S+D+P++++SGDA T  SASD QA QPIEKRTSWPSLGYDFDPK+IKGKD
Sbjct  88   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  147

Query  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQ  176
            APPALEGSTVTWN+GTLT SELQIVSTLNAHKDQMP+EYKNLDDKINDPSTP+DLKAALQ
Sbjct  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207

Query  177  GLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPP  236
            GLKQDPRLFFAIGSQGDGKCGGK+ AQDLWDFSDSHPQVK +GGKND+FNPKDIKGS PP
Sbjct  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267

Query  237  QAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKG  296
             A +GS+VTW++G L Q+ELEIVS L+RHKDQ  +L   +LDAKINDPST PDLKKAL +
Sbjct  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC-PLKWSDLDAKINDPSTPPDLKKALTD  326

Query  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPD  356
            LQ DPRLFFAIGSQ DGKCGGKIK  DL  F   H+Q+AEY DK+AK+YTQNY+ASDSPD
Sbjct  327  LQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPD  386

Query  357  KTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHP  416
            KTKASVM  SDA+RE+YRYSDYLP++L++D F  +VDG+S T KCPPQ+IAAAQYFRDHP
Sbjct  387  KTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHP  446

Query  417  DEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDA  476
            D+WK ++GD+G+MS PDFLQK++SE+HLTADEQKTLDTINSHQDAFYGDGKE+TRDKLD+
Sbjct  447  DQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDS  506

Query  477  ISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQ  536
            ISKD+KADPAVKEAATQL +DPLLFGLLNNSITGYKKPH+FFGGGHVVDSGKISQ+DFR+
Sbjct  507  ISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRR  566

Query  537  FYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGkddppaikkpkkdVGTFQQGLHEFL  596
            FYD+MSAANKTV+ P TH+ASS++QQKAV+DMLMGKDDPPAIKKPKKDVG FQ+GLHEFL
Sbjct  567  FYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFL  626

Query  597  KWDSKILDWMSVGLSALNGIPVigeiadaaaialeseaqaaQVVDTAIQGGDMSLALKLA  656
            KWDSKILDWMSVGLSALNGIP+IGEI+DAA+IALESEAQAAQVVDTAIQGGDMSLALKLA
Sbjct  627  KWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLA  686

Query  657  GINMagavvgavggPTARIgakeaaegaakgtakgaakgag----ktaaeRPSAAAFAKG  712
            GINMAGAVVGAVGGPTARIGAK  A G A ++AKG+AKG +    +TAAERPSAA FAKG
Sbjct  687  GINMAGAVVGAVGGPTARIGAKAVAKGVAEAAAKGTAKGVAKGAGRTAAERPSAAEFAKG  746

Query  713  YVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQIIPTGIAD  772
            YV+G++ISKS EILK PV+AGLHYEEY+LDKQK+GEIHQK++NAGG P+GKQI+PT +A+
Sbjct  747  YVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQIVPTNVAN  806

Query  773  NFEGD  777
            NFEGD
Sbjct  807  NFEGD  811

9) hrpF in NC_010717


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  883 bits (3343),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 627/793 (80%), Positives = 712/793 (90%), Gaps = 13/793 (1%)

Query  1    MSLNMLSTGSNPSQLlgtssnesssselfgsdssndGSDLPSTMDTIF----qqiyllla  56
            MSLN LSTGSNPSQLLGT+ NES SSEL+GSDSS+D+SDLPSTMD IF    Q +  L +
Sbjct  28   MSLNTLSTGSNPSQLLGTPLNESDSSELLGSDSSKDDSDLPSTMDDIFLLIYQLLAALQT  87

Query  57   alqantqtsasGDTPANTASGDADTQMSASDWQATQPIEKRTSWPSLGYDFDPKNIKGKD  116
               ++T  ++S+D+P++++SGDA T  SASD QA QPIEKRTSWPSLGYDFDPK+IKGKD
Sbjct  88   NAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKD  147

Query  117  APPALEGSTVTWNDGTLTKSELQIVSTLNAHKDQMPIEYKNLDDKINDPSTPPDLKAALQ  176
            APPALEGSTVTWN+GTLT SELQIVSTLNAHKDQMP+EYKNLDDKINDPSTP+DLKAALQ
Sbjct  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207

Query  177  GLKQDPRLFFAIGSQGDGKCGGKVSAQDLWDFSDSHPQVKDLGGKNDEFNPKDIKGSNPP  236
            GLKQDPRLFFAIGSQGDGKCGGK+ AQDLWDFSDSHPQVK +GGKND+FNPKDIKGS PP
Sbjct  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267

Query  237  QAAEGSTVTWNDGQLNQSELEIVSVLDRHKDQVDSLSFDQLDAKINDPSTQPDLKKALKG  296
             A +GS+VTW++G L Q+ELEIVS L+RHKDQ  +L   +LDAKINDPST PDLKKAL +
Sbjct  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQC-PLKWSDLDAKINDPSTPPDLKKALTD  326

Query  297  LQKDPRLFFAIGSQKDGKCGGKIKAQDLTDFSYYHPQIAEYNDKKAKSYTQNYIASDSPD  356
            LQ DPRLFFAIGSQ DGKCGGKIK  DL  F   H+Q+AEY DK+AK+YTQNY+ASDSPD
Sbjct  327  LQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPD  386

Query  357  KTKASVMTKSDALREMYRYSDYLPGNLSEDEFAKIVDGDSKTGKCPPQLIAAAQYFRDHP  416
            KTKASVM  SDA+RE+YRYSDYLP++L++D F  +VDG+S T KCPPQ+IAAAQYFRDHP
Sbjct  387  KTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHP  446

Query  417  DEWKEFSGDAGTMSTPDFLQKSTSEMHLTADEQKTLDTINSHQDAFYGDGKELTRDKLDA  476
            D+WK ++GD+G+MS PDFLQK++SE+HLTADEQKTLDTINSHQDAFYGDGKE+TRDKLD+
Sbjct  447  DQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDS  506

Query  477  ISKDNKADPAVKEAATQLASDPLLFGLLNNSITGYKKPHHFFGGGHVVDSGKISQNDFRQ  536
            ISKD+KADPAVKEAATQL +DPLLFGLLNNSITGYKKPH+FFGGGHVVDSGKISQ+DFR+
Sbjct  507  ISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFGGGHVVDSGKISQDDFRR  566

Query  537  FYDHMSAANKTVNTPATHEASSPDQQKAVADMLMGkddppaikkpkkdVGTFQQGLHEFL  596
            FYD+MSAANKTV+ P TH+ASS++QQKAV+DMLMGKDDPPAIKKPKKDVG FQ+GLHEFL
Sbjct  567  FYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFL  626

Query  597  KWDSKILDWMSVGLSALNGIPVigeiadaaaialeseaqaaQVVDTAIQGGDMSLALKLA  656
            KWDSKILDWMSVGLSALNGIP+IGEI+DAA+IALESEAQAAQVVDTAIQGGDMSLALKLA
Sbjct  627  KWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLA  686

Query  657  GINMagavvgavggPTARIgakgaakgvaevaakeaaegaakgtakgsakgagktaaeRP  716
            GINMAGAVVGAVGGPTARI         A   AK  AE+AAKGTAKG AKGAG+TAAERP
Sbjct  687  GINMAGAVVGAVGGPTARI--------GAKAVAKGVAEAAAKGTAKGVAKGAGRTAAERP  738

Query  717  SAAAFAKGYVAGSTISKSTEILKKPVMAGLHYEEYQLDKQKDGEIHQKLDNAGGAPVGKQ  776
            SAA FAKGYV+G++ISKS EILK PV+AGLHYEEY+LDKQK+GEIHQK++NAGG P+GKQ
Sbjct  739  SAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQKEGEIHQKMENAGGIPMGKQ  798

Query  777  IIPTGIADNFEGD  789
            I+PT +A+NFEGD
Sbjct  799  IVPTNVANNFEGD  811

10) XC_3025 in NC_007086


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  724 bits (2738),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/704 (69%), Positives = 605/704 (86%), Gaps = 16/704 (2%)

Query  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277
            +F+PK+IKG  +PPA EGS+VTW+GGTLT S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  137  DFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDP  196

Query  278  ATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTA  337
            +TP+DLK ALQGL+QDP LFFA++SQG+GK        C GK+ A++L DF+D HPQV A
Sbjct  197  STPADLKAALQGLKQDPRLFFAIGSQGDGK--------CGGKIKAQDLWDFSDSHPQVKA  248

Query  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLD  397
             GGKN  +NP  +KG   PP+VDGSSVTWDGGTLTQNELEIV+TLNRHKD+CP+KW+DLD
Sbjct  249  MGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLD  308

Query  398  AKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIA  457
            AK +DP+ PPDL+KA++DLQ DP LF AIG+QG  G C+GK+ + DL +F     HAQ+A
Sbjct  309  AKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGD-GKCGGKIKDGDLGKFV--SHHAQVA  365

Query  458  QYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGD  517
            +YA++QAK YTQNYVASDSPDKT ++VM ESDAMRELYRYSDYLP DLNQD+FK LV+G+
Sbjct  366  EYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGE  425

Query  518  STTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTI  577
            S+TKK PPQVIAAAQYFR+HPDQWKALAGD  SMS +DFLQK++SE+HLTA E KTLDTI
Sbjct  426  SSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTI  485

Query  578  NSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGYKKPH  637
            NSHQ+AF+GDGKEVTRDKLD+I KDDKADPAV++AA QLL DPLLFGLLNN+ITGYKKPH
Sbjct  486  NSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPH  545

Query  638  SFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQ  697
             FFGGGHVVDSGKIS+ DF++FY++M+A NKT+D P TH A+S+EQ+KAV+DMLMGK D 
Sbjct  546  RFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDP  605

Query  698  PEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGevadaaalafeseaq  757
            P IK+ K DVG F  GLHEFLKWDSKILD +SV+LSA+NGIP+IGE++DAA++A+ESEAQ
Sbjct  606  PAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQ  665

Query  758  aaQVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakgatqg  817
            AAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    +AK+VA G A +A++G
Sbjct  666  AAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI----GAKAVAKGVAEAAAKG  721

Query  818  ttkgaakgggkgVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKK  877
            T+KG AKG+G+  AER  + ++AKGY+ GT+I+++ E+LKTPVLAGLHYEE RLDK+ K 
Sbjct  722  TAKGVAKGAGRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQ-KE  780

Query  878  GEIRKNLEAAGGVPLGKQFIPKAIADNFEADTKENLRHVRGRRK  921
            GEI++++E AGG+P+GKQ++P  +A+NFE+D ++NLR++R RR+
Sbjct  781  GEIHQKMENAGGIPMGKQIVPTNVANNFEGDLRQNLRNIRVRRR  824


 Score =  323 bits (1213),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 220/355 (62%), Positives = 283/355 (80%), Gaps = 22/355 (6%)

Query  1    MSLNTLSTGSTAGLFL--PLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAA-  57
            MSLNTLSTGS ++ +L  PL +++ S+ LLGSDS+ +DSDL  +MD++FL  IY+L+AA 
Sbjct  28   MSLNTLSTGSNPSQLLGTPL-NESDSSELLGSDSSKDDSDLPSTMDDIFLL-IYQLLAAL  85

Query  58   -TYGNTSLNGPGSGIPGLDTPSAD--------DLQASQPIEKRTSWPTLSAPFNVKDIKG  108
             T + TS +G GS+ +   +PS+D        D QA+QPIEKRTSWP+L+  F+ KDIKG
Sbjct  86   QTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKG  145

Query  109  SRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSA  168
               PPA++GS+VTW+GGTLTPSELQIVSTLN HKD+ PLE+ +LDDKINDPSTP+DLK+A
Sbjct  146  KDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAA  205

Query  169  LQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGAT  228
            LQGL++DPRLFFAIGSQGDGKCGGKIKA DLWDF+D H QV A+GGKN +FNPK+IKG+T
Sbjct  206  LQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGST  265

Query  229  PPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQ  288
            PPPA +GSSVTWDGGTLTQ++LEIVSTLN+H+D  P+  + LD KINDP+TPPDLKKAL 
Sbjct  266  PPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALT  325

Query  289  GLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNA  343
            +LQ DP LFFA++S        +++GKC GK+  ++L  F  +H+QV+  ++K+A
Sbjct  326  DLQSDPRLFFAIGS--------QGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQA  372

11) hrpF in NC_003902


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  724 bits (2738),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/704 (69%), Positives = 605/704 (86%), Gaps = 16/704 (2%)

Query  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277
            +F+PK+IKG  +PPA EGS+VTW+GGTLT S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  137  DFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDP  196

Query  278  ATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTA  337
            +TP+DLK ALQGL+QDP LFFA++SQG+GK        C GK+ A++L DF+D HPQV A
Sbjct  197  STPADLKAALQGLKQDPRLFFAIGSQGDGK--------CGGKIKAQDLWDFSDSHPQVKA  248

Query  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLD  397
             GGKN  +NP  +KG   PP+VDGSSVTWDGGTLTQNELEIV+TLNRHKD+CP+KW+DLD
Sbjct  249  MGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLD  308

Query  398  AKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIA  457
            AK +DP+ PPDL+KA++DLQ DP LF AIG+QG  G C+GK+ + DL +F     HAQ+A
Sbjct  309  AKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGD-GKCGGKIKDGDLGKFV--SHHAQVA  365

Query  458  QYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGD  517
            +YA++QAK YTQNYVASDSPDKT ++VM ESDAMRELYRYSDYLP DLNQD+FK LV+G+
Sbjct  366  EYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGE  425

Query  518  STTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTI  577
            S+TKK PPQVIAAAQYFR+HPDQWKALAGD  SMS +DFLQK++SE+HLTA E KTLDTI
Sbjct  426  SSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTI  485

Query  578  NSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGYKKPH  637
            NSHQ+AF+GDGKEVTRDKLD+I KDDKADPAV++AA QLL DPLLFGLLNN+ITGYKKPH
Sbjct  486  NSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPH  545

Query  638  SFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQ  697
             FFGGGHVVDSGKIS+ DF++FY++M+A NKT+D P TH A+S+EQ+KAV+DMLMGK D 
Sbjct  546  RFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDP  605

Query  698  PEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGevadaaalafeseaq  757
            P IK+ K DVG F  GLHEFLKWDSKILD +SV+LSA+NGIP+IGE++DAA++A+ESEAQ
Sbjct  606  PAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQ  665

Query  758  aaQVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakgatqg  817
            AAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    +AK+VA G A +A++G
Sbjct  666  AAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI----GAKAVAKGVAEAAAKG  721

Query  818  ttkgaakgggkgVAEREKPLDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKEKKK  877
            T+KG AKG+G+  AER  + ++AKGY+ GT+I+++ E+LKTPVLAGLHYEE RLDK+ K 
Sbjct  722  TAKGVAKGAGRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQ-KE  780

Query  878  GEIRKNLEAAGGVPLGKQFIPKAIADNFEADTKENLRHVRGRRK  921
            GEI++++E AGG+P+GKQ++P  +A+NFE+D ++NLR++R RR+
Sbjct  781  GEIHQKMENAGGIPMGKQIVPTNVANNFEGDLRQNLRNIRVRRR  824


 Score =  323 bits (1213),  Expect = 3e-89, Method: Compositional matrix adjust.
 Identities = 220/355 (62%), Positives = 283/355 (80%), Gaps = 22/355 (6%)

Query  1    MSLNTLSTGSTAGLFL--PLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAA-  57
            MSLNTLSTGS ++ +L  PL +++ S+ LLGSDS+ +DSDL  +MD++FL  IY+L+AA 
Sbjct  28   MSLNTLSTGSNPSQLLGTPL-NESDSSELLGSDSSKDDSDLPSTMDDIFLL-IYQLLAAL  85

Query  58   -TYGNTSLNGPGSGIPGLDTPSAD--------DLQASQPIEKRTSWPTLSAPFNVKDIKG  108
             T + TS +G GS+ +   +PS+D        D QA+QPIEKRTSWP+L+  F+ KDIKG
Sbjct  86   QTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKG  145

Query  109  SRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSA  168
               PPA++GS+VTW+GGTLTPSELQIVSTLN HKD+ PLE+ +LDDKINDPSTP+DLK+A
Sbjct  146  KDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAA  205

Query  169  LQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGAT  228
            LQGL++DPRLFFAIGSQGDGKCGGKIKA DLWDF+D H QV A+GGKN +FNPK+IKG+T
Sbjct  206  LQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGST  265

Query  229  PPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQ  288
            PPPA +GSSVTWDGGTLTQ++LEIVSTLN+H+D  P+  + LD KINDP+TPPDLKKAL 
Sbjct  266  PPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALT  325

Query  289  GLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNA  343
            +LQ DP LFFA++S        +++GKC GK+  ++L  F  +H+QV+  ++K+A
Sbjct  326  DLQSDPRLFFAIGS--------QGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQA  372

12) hrpF in NC_010688


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  724 bits (2739),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 484/704 (69%), Positives = 605/704 (86%), Gaps = 16/704 (2%)

Query  218  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  277
            +F+PK+IKG  +PPA EGS+VTW+GGTLT S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  137  DFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDP  196

Query  278  ATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTA  337
            +TP+DLK ALQGL+QDP LFFA++SQG+GK        C GK+ A++L DF+D HPQV A
Sbjct  197  STPADLKAALQGLKQDPRLFFAIGSQGDGK--------CGGKIKAQDLWDFSDSHPQVKA  248

Query  338  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLD  397
             GGKN  +NP  +KG   PP+VDGSSVTWDGGTLTQNELEIV+TLNRHKD+CP+KW+DLD
Sbjct  249  MGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLD  308

Query  398  AKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIA  457
            AK +DP+ PPDL+KA++DLQ DP LF AIG+QG  G C+GK+ + DL +F     HAQ+A
Sbjct  309  AKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGD-GKCGGKIKDGDLGKFV--SHHAQVA  365

Query  458  QYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGD  517
            +YA++QAK YTQNYVASDSPDKT ++VM ESDAMRELYRYSDYLP DLNQD+FK LV+G+
Sbjct  366  EYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGE  425

Query  518  STTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTAPELKTLDTI  577
            S+TKK PPQVIAAAQYFR+HPDQWKALAGD  SMS +DFLQK++SE+HLTA E KTLDTI
Sbjct  426  SSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTI  485

Query  578  NSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGYKKPH  637
            NSHQ+AF+GDGKEVTRDKLD+I KDDKADPAV++AA QLL DPLLFGLLNN+ITGYKKPH
Sbjct  486  NSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPH  545

Query  638  SFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQ  697
             FFGGGHVVDSGKIS+ DF++FY++M+A NKT+D P TH A+S+EQ+KAV+DMLMGK D 
Sbjct  546  RFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDP  605

Query  698  PEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGevadaaalafeseaq  757
            P IK+ K DVG F  GLHEFLKWDSKILD +SV+LSA+NGIP+IGE++DAA++A+ESEAQ
Sbjct  606  PAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQ  665

Query  758  aaQVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakgatqg  817
            AAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    +AK+VA G A +A++G
Sbjct  666  AAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI----GAKAVAKGVAEAAAKG  721

Query  818  ttkgaakgggkgVAEREKPLDIAKGYIIGTTINRPTEMLKTPVLAGLHYEEVRLDKEKKK  877
            T+KG AKG+G+  AER  + ++AKGY+ GT+I+++ E+LKTPVLAGLHYEE RLDK+ K 
Sbjct  722  TAKGVAKGAGRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQ-KE  780

Query  878  GEIRKNLEAAGGVPLGKQFIPKAIADNFEADTKENLRHVRGRRK  921
            GEI++++E AGG+P+GKQ++P  +A+NFE+D ++NLR++R RR+
Sbjct  781  GEIHQKMENAGGIPMGKQIVPTNVANNFEGDLRQNLRNIRVRRR  824


 Score =  324 bits (1217),  Expect = 1e-89, Method: Compositional matrix adjust.
 Identities = 220/355 (62%), Positives = 284/355 (80%), Gaps = 22/355 (6%)

Query  1    MSLNTLSTGSTAGLFL--PLTDDASSPGLLGSDSAMNDSDLLLAMDNLFLQQIYRLIAA-  57
            MSLNTLSTGS ++ +L  PL +++ S+ LLGSDS+ +DSDL  +MD++FL  IY+L+AA 
Sbjct  28   MSLNTLSTGSNPSQLLGTPL-NESDSSELLGSDSSKDDSDLPSTMDDIFLL-IYQLLAAL  85

Query  58   -TYGNTSLNGPGSGIPGLDTPSAD--------DLQASQPIEKRTSWPTLSAPFNAKDIKG  108
             T + TS +G GS+ +   +PS+D        D QA+QPIEKRTSWP+L+  F++KDIKG
Sbjct  86   QTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKG  145

Query  109  SRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAKLDDKINDPSTPPDLKSA  168
               PPA++GS+VTW+GGTLTPSELQIVSTLN HKD+ PLE+ +LDDKINDPSTP+DLK+A
Sbjct  146  KDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAA  205

Query  169  LQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTALGGKNAEFNPKNIKGAT  228
            LQGL++DPRLFFAIGSQGDGKCGGKIKA DLWDF+D H QV A+GGKN +FNPK+IKG+T
Sbjct  206  LQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGST  265

Query  229  PPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDPATPPDLKKALQ  288
            PPPA +GSSVTWDGGTLTQ++LEIVSTLN+H+D  P+  + LD KINDP+TPPDLKKAL 
Sbjct  266  PPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALT  325

Query  289  GLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTAQGGKNA  343
            +LQ DP LFFA++S        +++GKC GK+  ++L  F  +H+QV+  ++K+A
Sbjct  326  DLQSDPRLFFAIGS--------QGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQA  372

13) XCR_1459 in NC_017271


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  720 bits (2723),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 483/704 (69%), Positives = 604/704 (86%), Gaps = 16/704 (2%)

Query  185  EFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLDEKINDP  244
            +F+PK+IKG  +PPA EGS+VTW+GGTLT S+L+IVSTLN H+D MP+E+ +LD+KINDP
Sbjct  137  DFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDP  196

Query  245  ATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADRHPQVTA  304
            +TP+DLK ALQGL+QDP LFFA++SQG+GK        C GK+ A++L DF+D HPQV A
Sbjct  197  STPADLKAALQGLKQDPRLFFAIGSQGDGK--------CGGKIKAQDLWDFSDSHPQVKA  248

Query  305  QGGKNATYNPEKMKGRDLPPPVDGSSVTWDGGTLTQNELEIVATLNRHKDKCPVKWTDLD  364
             GGKN  +NP  +KG   PP+VDGSSVTWDGGTLTQNELEIV+TLNRHKD+CP+KW+DLD
Sbjct  249  MGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLD  308

Query  365  AKSKDPAIPPDLQKAFADLQQDPALFHAIGAQGSKGSCDGKFTEKDLTRFSVPEKHAQIA  424
            AK +DP+ PPDL+KA++DLQ DP LF AIG+QG  G C+GK+ + DL +F     HAQ+A
Sbjct  309  AKINDPSTPPDLKKALTDLQSDPRLFFAIGSQGD-GKCGGKIKDGDLGKFV--SHHAQVA  365

Query  425  QYAEQQAKGYTQNYVASDSPDKTEPTVMTESDAMRELYRYSDYLPKDLNQDAFKQLVEGD  484
            +YA++QAK YTQNYVASDSPDKT ++VM ESDAMRELYRYSDYLP DLNQD+FK LV+G+
Sbjct  366  EYADKQAKNYTQNYVASDSPDKTKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGE  425

Query  485  STTKKSPPQVIAAAQYFREHPDQWKALAGDKESMSTADFLQKSTSEMHLTVPELKTLDTI  544
            S+TKK PPQVIAAAQYFR+HPDQWKALAGD  SMS +DFLQK++SE+HLT  E KTLDTI
Sbjct  426  SSTKKCPPQVIAAAQYFRDHPDQWKALAGDSGSMSKPDFLQKASSEIHLTADEQKTLDTI  485

Query  545  NSHQEAFFGDGKEVTRDKLDTIVKDDKADPAVRDAAKQllgdpllfgllNNAITGYKKPH  604
            NSHQ+AF+GDGKEVTRDKLD+I KDDKADPAV++AA QLL DPLLFGLLNN+ITGYKKPH
Sbjct  486  NSHQDAFYGDGKEVTRDKLDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPH  545

Query  605  SFFGGGHVVDSGKISNKDFQQFYEHMTAVNKTLDTPPTHAATSPEQKKAVADMLMGKADQ  664
             FFGGGHVVDSGKIS+ DF++FY++M+A NKT+D P TH A+S+EQ+KAV+DMLMGK D 
Sbjct  546  RFFGGGHVVDSGKISQDDFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDP  605

Query  665  PEIKRKKHDVGTFSKGLHEFLKWDSKILDGISVALSAMNGIPLIGefadaaalafeseaq  724
            P IK+ K DVG F  GLHEFLKWDSKILD +SV+LSA+NGIP+IGE++DAA++A+ESEAQ
Sbjct  606  PAIKKPKKDVGVFQEGLHEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQ  665

Query  725  aaqVIDTALQGGNLSLAWKLAGINMagavvgavggPTARLaakgaakgvaegaakgatqg  784
            AAQV+DTA+QGG++SLA KLAGINMAGAVVGAVGGPTAR+    +AK+VA G A +A++G
Sbjct  666  AAQVVDTAIQGGDMSLALKLAGINMAGAVVGAVGGPTARI----GAKAVAKGVAEAAAKG  721

Query  785  ttkgaakgggkgVAEREKPRDIAKGYIIGTSINRPTEMLKTPVLAGLHYEEVRLDKERKK  844
            T+KG AKG+G+  AER  + ++AKGY+ GT+I+++ E+LKTPVLAGLHYEE RLDK+ K 
Sbjct  722  TAKGVAKGAGRTAAERPSAAEFAKGYVGGTAISKSVEILKTPVLAGLHYEEYRLDKQ-KE  780

Query  845  GEIRKNLEAAGGVPLGKQFIPRAIADNFEADTKENLRHVRGRRK  888
            GEI++++E AGG+P+GKQ++P  +A+NFE+D ++NLR++R RR+
Sbjct  781  GEIHQKMENAGGIPMGKQIVPTNVANNFEGDLRQNLRNIRVRRR  824


 Score =  307 bits (1149),  Expect = 3e-84, Method: Compositional matrix adjust.
 Identities = 196/312 (63%), Positives = 250/312 (81%), Gaps = 19/312 (6%)

Query  9    AMDNLFLQQIYLLIAA--TYGNTSLNGPGSGIPGLDTPSAD--------DLQASQPIEKR  58
            +MD++FL  IY L+AA  T + TS +G GS+ +   +PS+D        D QA+QPIEKR
Sbjct  70   TMDDIFLL-IYQLLAALQTNAPTSTSGNGSADAPTSAPSGDASTPSSASDDQANQPIEKR  128

Query  59   TSWPTLSAPFNAKDIKGSRLPPAVDGSSVTWEGGTLTPSELQIVSTLNQHKDKTPLEFAK  118
            TSWP+L+  F++KDIKG   PPA++GS+VTW+GGTLTPSELQIVSTLN HKD+ PLE+ +
Sbjct  129  TSWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKN  188

Query  119  LDDKINDPSTPPDLKSALQGLQKDPRLFFAIGSQGDGKCGGKIKAGDLWDFADHHQQVTA  178
            LDDKINDPSTP+DLK+ALQGL++DPRLFFAIGSQGDGKCGGKIKA DLWDF+D H QV A
Sbjct  189  LDDKINDPSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKA  248

Query  179  LGGKNAEFNPKNIKGATPPPAAEGSSVTWDGGTLTQSQLEIVSTLNQHRDMMPIEFAKLD  238
            +GGKN +FNPK+IKG+TPPPA +GSSVTWDGGTLTQ++LEIVSTLN+H+D  P+  + LD
Sbjct  249  MGGKNDQFNPKDIKGSTPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLD  308

Query  239  EKINDPATPPDLKKALQGLQQDPGLFFAMASqghgkhhhddqgkCNGKLIADNLYDFADR  298
             KINDP+TPPDLKKAL +LQ DP LFFA++S        +++GKC GK+  ++L  F  +
Sbjct  309  AKINDPSTPPDLKKALTDLQSDPRLFFAIGS--------QGDGKCGGKIKDGDLGKFVSH  360

Query  299  HPQVTAQGGKNA  310
            H+QV+  ++K+A
Sbjct  361  HAQVAEYADKQA  372

14) popF2 in NC_017575


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  436 bits (1641),  Expect = 3e-123, Method: Compositional matrix adjust.
 Identities = 287/607 (48%), Positives = 419/607 (70%), Gaps = 46/607 (7%)

Query  161  APPV--GSDVTWNGGTLNDTQLQIIGILNLHKDQGDISWDSIQDKINDPNTPPDLKWALQ  218
            APP   GS VTWNGGTL  ++LQI++ LN HKDQ  +   +++DKINDP+TP+DLK ALQ
Sbjct  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207

Query  219  ALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKGHPQV---------------------  257
            +L QD  LF AIGSQGDG+ GGKIK++DL +F+ +HPQV                     
Sbjct  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267

Query  258  -------LTWNSGTLNNSQLEIMSVLARHKDKLPIEWKSIQDKANDPSLPPDLRAALQAL  310
                   +TW++GTL +++LEI+S L RHKD+ P+ W  ++ K NDPS PPDL+ AL  L
Sbjct  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDL  327

Query  311  ANDPALFFAIGSQGDGKCGGKIKAGDVSKFADNHPQVIEYNRKKAEGYVKDYIPSDAKPG  370
             +DP LFFAIGSQGDGKCGGKIK GD++KF  +H+QV EY  K+A  Y ++Y++SD+   
Sbjct  328  QSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPDK  387

Query  371  DKPSAMTQNDALRELYRYSDYLPKKLDMDALQHIVDGDSNAKKTPPQVIAAAQYFLQNRN  430
             K+S M ++DA+RELYRYSDYLP  L+ D+++ +VDG+S++KK PPQVIAAAQYF ++ +
Sbjct  388  TKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHPD  447

Query  431  EWASLNKLGDNPDKKVGKADFLQRAASAVHLTKEDLKTVSTINDNLDVFFKDGQKITRDR  490
            +W +L   GD+    ++K+DFLQ+A+S +HLT ++ KT+ TIN + D F+ DG+ +TRD+
Sbjct  448  QWKALA--GDSGS--MSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDK  503

Query  491  LAAMSEDESLSSGVRDAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDSGVIGKK  550
            L ++S D+   ++V++AA QLL+DPLL+GL+NN+ +GYK  + FF+ GG  VDSG I++ 
Sbjct  504  LDSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFG-GGHVVDSGKISQD  562

Query  551  DFEKFMSSMTDANKTVQERKTHDAKSEASQSAVSDMGMGMEDQPDIKAVKKSGGALKKVM  610
            DF +F  +M+ ANKTV+   THDA S   Q AVSDM MG +D P IK  KK  G ++  +
Sbjct  563  DFRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGL  622

Query  611  DKVLTIYAKVMDIASQVVGALGVIPGLGEIADALSIGMAAGASAAKVLSTLLDGGNLKKA  670
            +  L   +K++D  S  ++AL  IP +GEI+DA SI++ + A AA+V+ T ++GG++  A
Sbjct  623  HEFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLA  682

Query  671  LAEAGINLASAALGAIAGPEARVALKNGLTKMLVE---KVANTGIDLAVDKAKS------  721
            L  AGIN+A+A +GA++GP AR++ K +++K + E   K +  G+  + +++ +      
Sbjct  683  LKLAGINMAGAVVGAVGGPTARIGAK-AVAKGVAEAAAKGTAKGVAKGAGRTAAERPSAA  741

Query  722  -FVDGYL  727
             F  GY+
Sbjct  742  EFAKGYV  748


 Score =  111 bits (403),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 74/140 (53%), Positives = 99/140 (71%), Gaps = 8/140 (5%)

Query  238  FGGK-IKGKDLAEFAKGHPQVLTWNSGTLNNSQLEIMSVLARHKDKLPIEWKSIQDKAND  296
            F+ K IKGKD +    G    +TWN+GTL  S+L+I+S L  HKD++P+E K+++DK ND
Sbjct  138  FDPKDIKGKDAPPALEG--STVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKIND  195

Query  297  PSLPPDLRAALQALANDPALFFAIGSQGDGKCGGKIKAGDVSKFADNHPQVIEYNRKKAE  356
            PS P+DL+AALQ+L +DP LFFAIGSQGDGKCGGKIKA D+  F+D+HPQV     K   
Sbjct  196  PSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQV-----KAMG  250

Query  357  GYVKDYIPSDAKPGDKPSAM  376
            G   ++ P D K +  P+A+
Sbjct  251  GKNDQFNPKDIKGSTPPPAV  270


 Score = 95.2 bits (342),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 55/99 (56%), Positives = 72/99 (73%), Gaps = 0/99 (0%)

Query  159  PSAPPVGSDVTWNGGTLNDTQLQIIGILNLHKDQGDISWDSIQDKINDPNTPPDLKWALQ  218
            P+++  GS VTW+GGTL + +L+I++ LN HKDQ  + W  ++ KINDP+TPPDLK AL 
Sbjct  266  PPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALT  325

Query  219  ALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKGHPQV  257
             L  D  LF AIGSQGDG+ GGKIK+ DL+ F   H+QV
Sbjct  326  DLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQV  364

15) popF1 in NC_003296


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  422 bits (1588),  Expect = 4e-119, Method: Compositional matrix adjust.
 Identities = 282/600 (47%), Positives = 416/600 (70%), Gaps = 43/600 (7%)

Query  102  GSDVTWNGGTLNDTQLQIIGILNLHKDKGDISWDKLQDKINDPDTPPDLKWALQALSQDF  161
            GS VTWNGGTL  ++LQI++ LN HKD+  +   +L+DKINDP TP+DLK ALQ+L QD 
Sbjct  154  GSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQGLKQDP  213

Query  162  NLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQV---------------------------  194
             LF AIGSQGDG+ GGKIK++DL +F+ SH+QV                           
Sbjct  214  RLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPPPAVDGS  273

Query  195  -LTWNSGTLNDSQLEIMSILARHKDKMPVDWSSIQDKINDPSTPSDLKAALQALANDPAL  253
             +TW++GTL +++LEI+S L RHKD+ P+ WS ++ KINDPSTP+DLK AL  L +DP L
Sbjct  274  SVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDLQSDPRL  333

Query  254  FFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAEGYVKNYIPSDAKPGDKPSAM  313
            FFAIGSQGDG+C GKIK GD++KF  +H+QV EY  K+A  Y +NY++SD+    K+S M
Sbjct  334  FFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPDKTKASVM  393

Query  314  TQNDALRELYRYSDYLPKKLDMEAFQRIVDGDSDVKKAPPQVIAAAEYFLQNRNEWASLN  373
             ++DA+RELYRYSDYLP  L+ ++F+ +VDG+S  KK PPQVIAAA+YF ++ ++W +L 
Sbjct  394  NESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHPDQWKALA  453

Query  374  KMDDPDKRVGKSDFLQRAASAVHLSKEDLQTVSTINSNLDVFFKDGQKITRDRLAAMSQD  433
               +    ++K+DFLQ+A+S +HL+ ++ +T+ TINS+ D F+ DG+ +TRD+L ++S+D
Sbjct  454  ---GDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDSISKD  510

Query  434  ESLSPAVRNAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDSGVIGKKDFEKFMS  493
            +   PAV++AA QLL+DPLL+GL+NN+ +GYK  + FF+ GG  VDSG I++ DF +F  
Sbjct  511  DKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFG-GGHVVDSGKISQDDFRRFYD  569

Query  494  SMTDANKTVQARKTHPANSEASKSAVADMGMGMEDQPDIKAVKKSGGALKKAMDKILTIY  553
            +M+ ANKTV+   TH A+S   + AV+DM MG +D P IK  KK  G ++ +++ +L   
Sbjct  570  NMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFLKWD  629

Query  554  SKVMDIASQVVGALGVIPGLGEIadalsmgmaagasaaKVLSTLLNGGSLKKALAEAGIN  613
            SK++D  S  ++AL  IP +GEI+DA S+++ + A AA+V+ T ++GG +  AL  AGIN
Sbjct  630  SKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLAGIN  689

Query  614  LASAALGAVAGPEARVALKNGLTKMLVE---KVANTGIDLAVDKAKS-------FVDGYL  663
            +A+A +GAV+GP AR++ K +++K + E   K +  G+  + +++ +       F  GY+
Sbjct  690  MAGAVVGAVGGPTARIGAK-AVAKGVAEAAAKGTAKGVAKGAGRTAAERPSAAEFAKGYV  748


 Score =  111 bits (403),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 72/140 (52%), Positives = 101/140 (73%), Gaps = 8/140 (5%)

Query  175  FGGK-IKGKDLAEFAKSHSQVLTWNSGTLNDSQLEIMSILARHKDKMPVDWSSIQDKIND  233
            F+ K IKGKD +  +  ++  +TWN+GTL  S+L+I+S L  HKD+MP++  +++DKIND
Sbjct  138  FDPKDIKGKDAP--PALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKIND  195

Query  234  PSTPSDLKAALQALANDPALFFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAE  293
            PSTP+DLKAALQ+L +DP LFFAIGSQGDG+C GKIKA D+  F+D+HPQV     K+ +
Sbjct  196  PSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQ  255

Query  294  GYVKNYIPSDAKPGDKPSAM  313
                 + P D K +  P+A+
Sbjct  256  -----FNPKDIKGSTPPPAV  270


 Score = 96.8 bits (348),  Expect = 4e-21, Method: Compositional matrix adjust.
 Identities = 56/101 (56%), Positives = 71/101 (71%), Gaps = 0/101 (0%)

Query  94   SQPATPPVGSDVTWNGGTLNDTQLQIIGILNLHKDKGDISWDKLQDKINDPDTPPDLKWA  153
            S P+ +  GS VTW+GGTL + +L+I++ LN HKD+  + W  L+ KINDP TPPDLK A
Sbjct  264  STPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKA  323

Query  154  LQALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQV  194
            L  L  D  LF AIGSQGDG+ GGKIK+ DL+ F   H+QV
Sbjct  324  LTDLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQV  364

16) F504_5021 in NC_021745


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  422 bits (1588),  Expect = 5e-119, Method: Compositional matrix adjust.
 Identities = 285/606 (48%), Positives = 419/606 (70%), Gaps = 45/606 (7%)

Query  69   TPPV--GSDVTWNGGTLNDTQLQIIGILNLHKDKGDISWDKLQDKINDPDTPPDLKWALQ  126
            +PP   GS VTWNGGTL  ++LQI++ LN HKD+  +   +L+DKINDP TP+DLK ALQ
Sbjct  148  APPALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKINDPSTPADLKAALQ  207

Query  127  ALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQV---------------------  165
            +L QD  LF AIGSQGDG+ GGKIK++DL +F+ SH+QV                     
Sbjct  208  GLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPP  267

Query  166  -------LTWNSGTLNDSQLEIMSILARHKDKMPVDWSSIQDKINDPSTPSDLKAALQAL  218
                   +TW++GTL +++LEI+S L RHKD+ P+ WS ++ KINDPSTP+DLK AL  L
Sbjct  268  PAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDL  327

Query  219  ANDPALFFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAEGYVKNYIPSDAKPG  278
             +DP LFFAIGSQGDG+C GKIK GD++KF  +H+QV EY  K+A  Y +NY++SD+   
Sbjct  328  QSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPDK  387

Query  279  DKPSAMTQNDALRELYRYSDYLPKKLDMEAFQRIVDGDSDVKKAPPQVIAAAEYFLQNRN  338
             K+S M ++DA+RELYRYSDYLP  L+ ++F+ +VDG+S  KK PPQVIAAA+YF ++ +
Sbjct  388  TKASVMNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHPD  447

Query  339  EWASLNKMDDPDKRVGKSDFLQRAASAVHLSKEDLQTVSTINSNLDVFFKDGQKITRDRL  398
            +W +L    +    ++K+DFLQ+A+S +HL+ ++ +T+ TINS+ D F+ DG+ +TRD+L
Sbjct  448  QWKALA---GDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKL  504

Query  399  ASMSQDESLSPAVRNAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDSGVIGKKD  458
             S+S+D+   PAV++AA QLL+DPLL+GL+NN+ +GYK  + FF+ GG  VDSG I++ D
Sbjct  505  DSISKDDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFG-GGHVVDSGKISQDD  563

Query  459  FEKFMSSMTDANKTVQARKTHPANSEASKSAVADMGMGMEDQPDIKAVKKSGGALKKAMD  518
            F +F  +M+ ANKTV+   TH A+S   + AV+DM MG +D P IK  KK  G ++ +++
Sbjct  564  FRRFYDNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLH  623

Query  519  KILTIYSKVMDIASQVVGALGVIPGLGEIadalsmgmaagasaaKVLSTLLNGGSLKKAL  578
             +L   SK++D  S  ++AL  IP +GEI+DA S+++ + A AA+V+ T ++GG +  AL
Sbjct  624  EFLKWDSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLAL  683

Query  579  AEAGINLASAALGAVAGPEARVALKNGLTKMLVE---KVANTGIDLAVDKAKS-------  628
              AGIN+A+A +GAV+GP AR++ K +++K + E   K +  G+  + +++ +       
Sbjct  684  KLAGINMAGAVVGAVGGPTARIGAK-AVAKGVAEAAAKGTAKGVAKGAGRTAAERPSAAE  742

Query  629  FVDGYL  634
            F  GY+
Sbjct  743  FAKGYV  748


 Score =  111 bits (403),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 72/140 (52%), Positives = 101/140 (73%), Gaps = 8/140 (5%)

Query  146  FGGK-IKGKDLAEFAKSHSQVLTWNSGTLNDSQLEIMSILARHKDKMPVDWSSIQDKIND  204
            F+ K IKGKD +  +  ++  +TWN+GTL  S+L+I+S L  HKD+MP++  +++DKIND
Sbjct  138  FDPKDIKGKDAP--PALEGSTVTWNGGTLTPSELQIVSTLNAHKDQMPLEYKNLDDKIND  195

Query  205  PSTPSDLKAALQALANDPALFFAIGSQGDGNCKGKIKAGDVSKFADNHPQVEEYNRKKAE  264
            PSTP+DLKAALQ+L +DP LFFAIGSQGDG+C GKIKA D+  F+D+HPQV     K+ +
Sbjct  196  PSTPADLKAALQGLKQDPRLFFAIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQ  255

Query  265  GYVKNYIPSDAKPGDKPSAM  284
                 + P D K +  P+A+
Sbjct  256  -----FNPKDIKGSTPPPAV  270


 Score = 96.5 bits (347),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 56/101 (56%), Positives = 71/101 (71%), Gaps = 0/101 (0%)

Query  65   SQPATPPVGSDVTWNGGTLNDTQLQIIGILNLHKDKGDISWDKLQDKINDPDTPPDLKWA  124
            S P+ +  GS VTW+GGTL + +L+I++ LN HKD+  + W  L+ KINDP TPPDLK A
Sbjct  264  STPPPAVDGSSVTWDGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKA  323

Query  125  LQALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAKSHSQV  165
            L  L  D  LF AIGSQGDG+ GGKIK+ DL+ F   H+QV
Sbjct  324  LTDLQSDPRLFFAIGSQGDGKCGGKIKDGDLGKFVSHHAQV  364

17) popF2 in NC_003296


> NC_003919_P1|3|G2|21241167|NP_640749.1|Xanthomonas_axonopodis_pv._citri_str._306|-|2989..5463|hrpF|XAC0394|HrpF 
protein
Length=824

 Score =  342 bits (1284),  Expect = 5e-95, Method: Compositional matrix adjust.
 Identities = 266/661 (41%), Positives = 426/661 (65%), Gaps = 71/661 (10%)

Query  67   GAAQQSPDPSAGPESQGNQPAPVDAAPPQ----------ESRPADPPL-GSDVTETGGTP  115
            +++ +++ PS++++ Q+NQP    ++ P            ++ A P+L GS VT  GGT 
Sbjct  105  APSGDASTPSSASDDQANQPIEKRTSWPSLGYDFDPKDIKGKDAPPALEGSTVTWNGGTL  164

Query  116  SPLQLQILGTLSLYLNARGLPFGERVMTRQSLEraannadapadlraaaqaMLSDPALYQ  175
            +P +LQI++TL+   +   L +       ++L+   N++ +PADL+AA Q++  DP L+ 
Sbjct  165  TPSELQIVSTLNAHKDQMPLEY-------KNLDDKINDPSTPADLKAALQGLKQDPRLFF  217

Query  176  AIGGND-----GKFARKDIDKFAKSHPQV----------------------------LTR  202
            AIG+++     GK+  +D+  F+ SHPQV                            +T+
Sbjct  218  AIGSQGDGKCGGKIKAQDLWDFSDSHPQVKAMGGKNDQFNPKDIKGSTPPPAVDGSSVTW  277

Query  203  NSGTLTDSQLEIMSILARHKDQLPVGWQSIQDKINDPSTPPDLKAALQVLANDPALFSAL  262
            ++GTLT+++LEI+S L RHKDQ P+ W  ++ KINDPSTPPDLK AL  L +DP LF A+
Sbjct  278  DGGTLTQNELEIVSTLNRHKDQCPLKWSDLDAKINDPSTPPDLKKALTDLQSDPRLFFAI  337

Query  263  GSPGKGHKHKASGDYRITAGDVSRFIDKHPQVEEYNRKKAEGYVKNYIPSDAKPGDKPSA  322
            GS G G   K +G  +I  GD+++F+  H+QV EY  K+A  Y +NY++SD+    K+S 
Sbjct  338  GSQGDG---KCGG--KIKDGDLGKFVSHHAQVAEYADKQAKNYTQNYVASDSPDKTKASV  392

Query  323  MTQNDALRELYRYSDYLPKKLDMEAFQRIVDGDSDVKKAPPQVIAAAEYFLQNRNEWASL  382
            M ++DA+RELYRYSDYLP  L+ ++F+ +VDG+S  KK PPQVIAAA+YF ++ ++W +L
Sbjct  393  MNESDAMRELYRYSDYLPDDLNQDTFKSLVDGESSTKKCPPQVIAAAQYFRDHPDQWKAL  452

Query  383  NKMDDPDKRVGKSDFLQRAASAVHLSKEDLQTVSTINSNLDVFFKDGQKITRDRLAAMSQ  442
                +    ++K+DFLQ+A+S +HL+ ++ +T+ TINS+ D F+ DG+ +TRD+L ++S+
Sbjct  453  A---GDSGSMSKPDFLQKASSEIHLTADEQKTLDTINSHQDAFYGDGKEVTRDKLDSISK  509

Query  443  DESLSPAVRNAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDSGVIGKKDFEKFM  502
            D+   PAV++AA QLL+DPLL+GL+NN+ +GYK  + FF+ GG  VDSG I++ DF +F 
Sbjct  510  DDKADPAVKEAATQLLNDPLLFGLLNNSITGYKKPHRFFG-GGHVVDSGKISQDDFRRFY  568

Query  503  SSMTDANKTVQARKTHPANSEASKSAVADMGMGMEDQPDIKAVKKSGGALKKAMDKILTI  562
             +M+ ANKTV+   TH A+S   + AV+DM MG +D P IK  KK  G ++ +++ +L  
Sbjct  569  DNMSAANKTVDKPVTHDASSAEQQKAVSDMLMGKDDPPAIKKPKKDVGVFQEGLHEFLKW  628

Query  563  YSKVMDIASQVVGALGMIPGLGEIadalsmgmaagasaaKVLSTLLNGGSLKKALAEAGI  622
             SK++D  S  ++AL  IP +GEI+DA S+++ + A AA+V+ T ++GG +  AL  AGI
Sbjct  629  DSKILDWMSVGLSALNGIPIIGEITDAASIALESEAQAAQVVDTAIQGGDMSLALKLAGI  688

Query  623  NLASAALGAVAGPEARVALKNGLTKMLVE---KVANTGIDLAVDKAKS-------FVDGY  672
            N+A+A +GAV+GP AR++ K +++K + E   K +  G+  + +++ +       F  GY
Sbjct  689  NMAGAVVGAVGGPTARIGAK-AVAKGVAEAAAKGTAKGVAKGAGRTAAERPSAAEFAKGY  747

Query  673  L  673
            +
Sbjct  748  V  748