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Homologs of hrpW gene of NC_003902_P1

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) hrpW
( YP_005636488.1 )

HrpW protein

NC_017271
(Xanthomonas campestris 756C)

2e-123

100

2) XC_3023
( YP_244091.2 )

HrpW protein

NC_007086
(Xanthomonas campestris 8004)

1e-122

100

3) hrpW
( NP_636593.2 )

HrpW protein

NC_003902
(Xanthomonas campestris ATCC 33913)

1e-122

100

4) hrpW
( YP_001904491.1 )

glycosylhydrolase-like type III secretion system protein

NC_010688
(Xanthomonas campestris B100)

4e-121

• Sequence Alignments

1) hrpW in NC_017271


> NC_003902_P1|3|G3|77747794|NP_636593.2|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|4129..5118|hrpW|XCC1219|HrpW 
protein
Length=329

 Score =  435 bits (1639),  Expect = 2e-123, Method: Compositional matrix adjust.
 Identities = 329/329 (100%), Positives = 329/329 (100%), Gaps = 0/329 (0%)

Query  33   MLTYCMQRMLRDMLQPQDQPFSDGQpptnpnptppmppsrppcstnpggqhgsgtgdgsg  92
            MLTYCMQRMLRDMLQPQDQPFSDGQPPTNPNPTPPMPPSRPPCSTNPGGQHGSGTGDGSG
Sbjct  1    MLTYCMQRMLRDMLQPQDQPFSDGQPPTNPNPTPPMPPSRPPCSTNPGGQHGSGTGDGSG  60

Query  93   gnggnhnrgnggtcgtgADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV  152
            GNGGNHNRGNGGTCGTGADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV
Sbjct  61   GNGGNHNRGNGGTCGTGADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV  120

Query  153  VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK  212
            VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK
Sbjct  121  VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK  180

Query  213  MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG  272
            MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG
Sbjct  181  MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG  240

Query  273  AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL  332
            AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL
Sbjct  241  AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL  300

Query  333  KTDAPDEVIAPSAFQATGATRIGHQPYSG  361
            KTDAPDEVIAPSAFQATGATRIGHQPYSG
Sbjct  301  KTDAPDEVIAPSAFQATGATRIGHQPYSG  329

2) XC_3023 in NC_007086


> NC_003902_P1|3|G3|77747794|NP_636593.2|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|4129..5118|hrpW|XCC1219|HrpW 
protein
Length=329

 Score =  432 bits (1628),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 329/329 (100%), Positives = 329/329 (100%), Gaps = 0/329 (0%)

Query  1    MLTYCMQRMLRDMLQPQDQPFSDGQpptnpnptppmppsrppcstnpggqhgsgtgdgsg  60
            MLTYCMQRMLRDMLQPQDQPFSDGQPPTNPNPTPPMPPSRPPCSTNPGGQHGSGTGDGSG
Sbjct  1    MLTYCMQRMLRDMLQPQDQPFSDGQPPTNPNPTPPMPPSRPPCSTNPGGQHGSGTGDGSG  60

Query  61   gnggnhnrgnggtcgtgADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV  120
            GNGGNHNRGNGGTCGTGADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV
Sbjct  61   GNGGNHNRGNGGTCGTGADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV  120

Query  121  VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK  180
            VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK
Sbjct  121  VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK  180

Query  181  MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG  240
            MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG
Sbjct  181  MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG  240

Query  241  AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL  300
            AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL
Sbjct  241  AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL  300

Query  301  KTDAPDEVIAPSAFQATGATRIGHQPYSG  329
            KTDAPDEVIAPSAFQATGATRIGHQPYSG
Sbjct  301  KTDAPDEVIAPSAFQATGATRIGHQPYSG  329

3) hrpW in NC_003902


> NC_003902_P1|3|G3|77747794|NP_636593.2|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|4129..5118|hrpW|XCC1219|HrpW 
protein
Length=329

 Score =  432 bits (1628),  Expect = 1e-122, Method: Compositional matrix adjust.
 Identities = 329/329 (100%), Positives = 329/329 (100%), Gaps = 0/329 (0%)

Query  1    MLTYCMQRMLRDMLQPQDQPFSDGQpptnpnptppmppsrppcstnpggqhgsgtgdgsg  60
            MLTYCMQRMLRDMLQPQDQPFSDGQPPTNPNPTPPMPPSRPPCSTNPGGQHGSGTGDGSG
Sbjct  1    MLTYCMQRMLRDMLQPQDQPFSDGQPPTNPNPTPPMPPSRPPCSTNPGGQHGSGTGDGSG  60

Query  61   gnggnhnrgnggtcgtgADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV  120
            GNGGNHNRGNGGTCGTGADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV
Sbjct  61   GNGGNHNRGNGGTCGTGADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV  120

Query  121  VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK  180
            VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK
Sbjct  121  VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK  180

Query  181  MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG  240
            MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG
Sbjct  181  MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG  240

Query  241  AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL  300
            AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL
Sbjct  241  AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL  300

Query  301  KTDAPDEVIAPSAFQATGATRIGHQPYSG  329
            KTDAPDEVIAPSAFQATGATRIGHQPYSG
Sbjct  301  KTDAPDEVIAPSAFQATGATRIGHQPYSG  329

4) hrpW in NC_010688


> NC_003902_P1|3|G3|77747794|NP_636593.2|Xanthomonas_campestris_pv._campestris_str._ATCC_33913|-|4129..5118|hrpW|XCC1219|HrpW 
protein
Length=329

 Score =  427 bits (1608),  Expect = 4e-121, Method: Compositional matrix adjust.
 Identities = 327/329 (99%), Positives = 327/329 (99%), Gaps = 0/329 (0%)

Query  1    MLTYCMQRMLRDMLQPQDQPFSDGQpptnpnptppmppsrppcstnpggqhgsgtgdgsg  60
            MLTYCMQRMLRDMLQPQDQPFSDGQPPTNPNPTPPMPPSRPPCSTNPGGQHGSGTGDGSG
Sbjct  1    MLTYCMQRMLRDMLQPQDQPFSDGQPPTNPNPTPPMPPSRPPCSTNPGGQHGSGTGDGSG  60

Query  61   gnggnhnrgnggtcgtgADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV  120
            GNGGNHNRGNGGTCGTGADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV
Sbjct  61   GNGGNHNRGNGGTCGTGADHRASPTNPGQAVRPCPDGPQAPLPPGKVVTAPPGLQNKTIV  120

Query  121  VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK  180
            VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK
Sbjct  121  VHKGEVFDGKGQTYIGGPGLGDGSQNEHQQPLFVVEDGGSLCNVNMKGGGDGVHFMGSGK  180

Query  181  MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEASGRPKVYIINCTFKNAADKVVQDNG  240
            MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPE SGRPKV IINCTFKNAADKVVQDNG
Sbjct  181  MVNCVNDDVSEDAVTIDGQGNREHDARIAGCRPEVSGRPKVDIINCTFKNAADKVVQDNG  240

Query  241  AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL  300
            AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL
Sbjct  241  AADVVMSGCTVNGAGKVFRTNGGHADIDTHLQVENCDFQQVKEAVFRTDAPGATVKLANL  300

Query  301  KTDAPDEVIAPSAFQATGATRIGHQPYSG  329
            KTDAPDEVIAPSAFQATGATRIGHQPYSG
Sbjct  301  KTDAPDEVIAPSAFQATGATRIGHQPYSG  329