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PAthogenisity Island DataBase (PAI DB)

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Homologs of tcpA gene of FJ209010

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

• Sequence Alignments

1) O3Y_03850 in NC_016944


> FJ209010|3|G3|218158662|ACK75636.1|Vibrio_cholerae_M1619|+|1731..2411|tcpA|-|toxin 
co-regulated pilin
Length=226

 Score =  226 bits (843),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 148/208 (72%), Positives = 178/208 (86%), Gaps = 6/208 (2%)

Query  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLG  80
            TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQN+N+VQ+AMTQTYR+LG
Sbjct  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNVNNVQVAMTQTYRGLG  80

Query  81   NYPatananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGL  140
             YPA++ +  +TQL+NGLV+LGK+SAD+ KNPF+G+ M + SF+RN+AANKAFAI V+GL
Sbjct  81   TYPASGTTALGTQLSNGLVNLGKLSADDVKNPFSGSVMPVQSFARNGAANKAFAIVVDGL  140

Query  141  TQAQCKTLVTSVGDMFPFINVK-EGAFAAVADLGDFETSVADAA-TGAGVIKSIAPGSAN  198
            T AQCK LVTSVGDMFP+I VK  G+FA+  D  DFET  A+AA  +AGV KSIA+GS N
Sbjct  141  TGAQCKQLVTSVGDMFPYIAVKAAGGFATAID--DFETVQANAADKAAGVKKSIAAGSVN  198

Query  199  LNLTNITHVEKLCTGT--APFTVAFGNS  224
            LNL++ITHVE+LC      +F+VA+GNS
Sbjct  199  LNLADITHVENLCHTDIGNSFAVALGNS  226

2) tcpA in NC_012578


> FJ209010|3|G3|218158662|ACK75636.1|Vibrio_cholerae_M1619|+|1731..2411|tcpA|-|toxin 
co-regulated pilin
Length=226

 Score =  226 bits (843),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 148/208 (72%), Positives = 178/208 (86%), Gaps = 6/208 (2%)

Query  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLG  80
            TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQN+N+VQ+AMTQTYR+LG
Sbjct  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNVNNVQVAMTQTYRGLG  80

Query  81   NYPatananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGL  140
             YPA++ +  +TQL+NGLV+LGK+SAD+ KNPF+G+ M + SF+RN+AANKAFAI V+GL
Sbjct  81   TYPASGTTALGTQLSNGLVNLGKLSADDVKNPFSGSVMPVQSFARNGAANKAFAIVVDGL  140

Query  141  TQAQCKTLVTSVGDMFPFINVK-EGAFAAVADLGDFETSVADAA-TGAGVIKSIAPGSAN  198
            T AQCK LVTSVGDMFP+I VK  G+FA+  D  DFET  A+AA  +AGV KSIA+GS N
Sbjct  141  TGAQCKQLVTSVGDMFPYIAVKAAGGFATAID--DFETVQANAADKAAGVKKSIAAGSVN  198

Query  199  LNLTNITHVEKLCTGT--APFTVAFGNS  224
            LNL++ITHVE+LC      +F+VA+GNS
Sbjct  199  LNLADITHVENLCHTDIGNSFAVALGNS  226

3) VCD_003500 in NC_012668


> FJ209010|3|G3|218158662|ACK75636.1|Vibrio_cholerae_M1619|+|1731..2411|tcpA|-|toxin 
co-regulated pilin
Length=226

 Score =  226 bits (843),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 148/208 (72%), Positives = 178/208 (86%), Gaps = 6/208 (2%)

Query  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLG  80
            TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQN+N+VQ+AMTQTYR+LG
Sbjct  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNVNNVQVAMTQTYRGLG  80

Query  81   NYPatananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGL  140
             YPA++ +  +TQL+NGLV+LGK+SAD+ KNPF+G+ M + SF+RN+AANKAFAI V+GL
Sbjct  81   TYPASGTTALGTQLSNGLVNLGKLSADDVKNPFSGSVMPVQSFARNGAANKAFAIVVDGL  140

Query  141  TQAQCKTLVTSVGDMFPFINVK-EGAFAAVADLGDFETSVADAA-TGAGVIKSIAPGSAN  198
            T AQCK LVTSVGDMFP+I VK  G+FA+  D  DFET  A+AA  +AGV KSIA+GS N
Sbjct  141  TGAQCKQLVTSVGDMFPYIAVKAAGGFATAID--DFETVQANAADKAAGVKKSIAAGSVN  198

Query  199  LNLTNITHVEKLCTGT--APFTVAFGNS  224
            LNL++ITHVE+LC      +F+VA+GNS
Sbjct  199  LNLADITHVENLCHTDIGNSFAVALGNS  226

4) VC0828 in NC_002505


> FJ209010|3|G3|218158662|ACK75636.1|Vibrio_cholerae_M1619|+|1731..2411|tcpA|-|toxin 
co-regulated pilin
Length=226

 Score =  226 bits (843),  Expect = 5e-61, Method: Compositional matrix adjust.
 Identities = 148/208 (72%), Positives = 178/208 (86%), Gaps = 6/208 (2%)

Query  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLG  80
            TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQN+N+VQ+AMTQTYR+LG
Sbjct  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNVNNVQVAMTQTYRGLG  80

Query  81   NYPatananaatQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGL  140
             YPA++ +  +TQL+NGLV+LGK+SAD+ KNPF+G+ M + SF+RN+AANKAFAI V+GL
Sbjct  81   TYPASGTTALGTQLSNGLVNLGKLSADDVKNPFSGSVMPVQSFARNGAANKAFAIVVDGL  140

Query  141  TQAQCKTLVTSVGDMFPFINVK-EGAFAAVADLGDFETSVADAA-TGAGVIKSIAPGSAN  198
            T AQCK LVTSVGDMFP+I VK  G+FA+  D  DFET  A+AA  +AGV KSIA+GS N
Sbjct  141  TGAQCKQLVTSVGDMFPYIAVKAAGGFATAID--DFETVQANAADKAAGVKKSIAAGSVN  198

Query  199  LNLTNITHVEKLCTGT--APFTVAFGNS  224
            LNL++ITHVE+LC      +F+VA+GNS
Sbjct  199  LNLADITHVENLCHTDIGNSFAVALGNS  226

5) tcpA in NC_016445


> FJ209010|3|G3|218158662|ACK75636.1|Vibrio_cholerae_M1619|+|1731..2411|tcpA|-|toxin 
co-regulated pilin
Length=226

 Score =  219 bits (817),  Expect = 6e-59, Method: Compositional matrix adjust.
 Identities = 148/208 (72%), Positives = 179/208 (87%), Gaps = 6/208 (2%)

Query  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLG  80
            TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQN+N+VQ+AMTQTYR+LG
Sbjct  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNVNNVQVAMTQTYRGLG  80

Query  81   NYPatanasaatqlanGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGL  140
             YPA++ ++ +TQL+NGLV+LGK+SAD+ KNPF+G+ M + SF+RN+AANKAFAI V+GL
Sbjct  81   TYPASGTTALGTQLSNGLVNLGKLSADDVKNPFSGSVMPVQSFARNGAANKAFAIVVDGL  140

Query  141  TQAQCKTLVTSVGDMFPFINVK-EGAFAAVADLGDFETSVADAA-TGAGVIKSIAPGSAN  198
            T AQCK LVTSVGDMFP+I VK  G+FA+  D  DFET  A+AA  +AGV KSIA+GS N
Sbjct  141  TGAQCKQLVTSVGDMFPYIAVKAAGGFATAID--DFETVQANAADKAAGVKKSIAAGSVN  198

Query  199  LNLTNITHVEKLCTGT--APFTVAFGNS  224
            LNL++ITHVE+LC      +F+VA+GNS
Sbjct  199  LNLADITHVENLCHTDIGNSFAVALGNS  226

6) tcpA in NC_012582


> FJ209010|3|G3|218158662|ACK75636.1|Vibrio_cholerae_M1619|+|1731..2411|tcpA|-|toxin 
co-regulated pilin
Length=226

 Score =  219 bits (817),  Expect = 6e-59, Method: Compositional matrix adjust.
 Identities = 136/207 (66%), Positives = 177/207 (86%), Gaps = 4/207 (1%)

Query  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLG  80
            TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ++N++QVA+TQTYRGLG
Sbjct  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNVNNVQVAMTQTYRGLG  80

Query  81   NYPATADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGL  140
             YPA++ ++ +++L++GLV+LGK+S+D+ KNPF G+ M + SF+RN+AANKAFAI VDGL
Sbjct  81   TYPASGTTALGTQLSNGLVNLGKLSADDVKNPFSGSVMPVQSFARNGAANKAFAIVVDGL  140

Query  141  TQAQCKTLITSVGDMFPYIAIKaggavaladlgdFEN-SAAAAETGVGVIKSIAPASKNL  199
            T AQCK L+TSVGDMFPYIA+K +++   + ++DFE   A AA+ + GV KSIA++S NL
Sbjct  141  TGAQCKQLVTSVGDMFPYIAVK-AAGGFATAIDDFETVQANAADKAAGVKKSIAAGSVNL  199

Query  200  DLTNITHVEKLCKGT--APFGVAFGNS  224
            +L++ITHVE+LC      +F+VA+GNS
Sbjct  200  NLADITHVENLCHTDIGNSFAVALGNS  226

7) tcpA in NC_009457


> FJ209010|3|G3|218158662|ACK75636.1|Vibrio_cholerae_M1619|+|1731..2411|tcpA|-|toxin 
co-regulated pilin
Length=226

 Score =  219 bits (817),  Expect = 6e-59, Method: Compositional matrix adjust.
 Identities = 136/207 (66%), Positives = 177/207 (86%), Gaps = 4/207 (1%)

Query  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQSLNSIQVALTQTYRGLG  80
            TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQ++N++QVA+TQTYRGLG
Sbjct  21   TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNVNNVQVAMTQTYRGLG  80

Query  81   NYPATADATAASKLTSGLVSLGKISSDEAKNPFIGTNMNIFSFPRNAAANKAFAISVDGL  140
             YPA++ ++ +++L++GLV+LGK+S+D+ KNPF G+ M + SF+RN+AANKAFAI VDGL
Sbjct  81   TYPASGTTALGTQLSNGLVNLGKLSADDVKNPFSGSVMPVQSFARNGAANKAFAIVVDGL  140

Query  141  TQAQCKTLITSVGDMFPYIAIKaggavaladlgdFEN-SAAAAETGVGVIKSIAPASKNL  199
            T AQCK L+TSVGDMFPYIA+K +++   + ++DFE   A AA+ + GV KSIA++S NL
Sbjct  141  TGAQCKQLVTSVGDMFPYIAVK-AAGGFATAIDDFETVQANAADKAAGVKKSIAAGSVNL  199

Query  200  DLTNITHVEKLCKGT--APFGVAFGNS  224
            +L++ITHVE+LC      +F+VA+GNS
Sbjct  200  NLADITHVENLCHTDIGNSFAVALGNS  226

8) tcpA in NC_006841


> FJ209010|3|G3|218158662|ACK75636.1|Vibrio_cholerae_M1619|+|1731..2411|tcpA|-|toxin 
co-regulated pilin
Length=226

 Score =  144 bits (529),  Expect = 3e-36, Method: Compositional matrix adjust.
 Identities = 86/190 (46%), Positives = 137/190 (73%), Gaps = 5/190 (2%)

Query  6    QRGMTLLEVIIVLGIMGVISAGVVILAQRAIDNQNVSKLSQALNTIQTAMVQTYRSKQSY  65
            Q GMTLLEVIIVLGIMGV+SAGVV LAQRAID+QN++K +Q +N +Q AM QTYR+  +Y
Sbjct  23   QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNVNNVQVAMTQTYRGLGTY  82

Query  66   PDVLQDAVKAKKLTDALVSMGRVTESDLINPFTGAPMLIFTAKDNKAANRGFAIKVSDLS  125
            P     A+ + +L+++LV++G+++  D+ NPF+G+ M + +   N AAN++FAI V +L+
Sbjct  83   PASGTTAL-GTQLSNGLVNLGKLSADDVKNPFSGSVMPVQSFARNGAANKAFAIVVDGLT  141

Query  126  KDQCTSLISNSADLFSFIEVQNRG--TAMAADF-YVDPDAT-KSVGVIKSTKGGAKTLDL  181
              QC  L+++ +D+F++I V+  G  ++   DF  V+++A+ K+ GV KS  +G+  L+L
Sbjct  142  GAQCKQLVTSVGDMFPYIAVKAAGGFATAIDDFETVQANAADKAAGVKKSIAAGSVNLNL  201

Query  182  TNLDHISALC  191
            +++ H+  LC
Sbjct  202  ADITHVENLC  211