Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
hypothetical protein |
NC_009792 (Citrobacter koseri ATCC BAA-895) |
4e-109 |
100 |
|
Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1) |
NC_020181 (Enterobacter aerogenes EA1509E) |
4e-109 |
100 |
|
VirB1 |
NC_018522 (Klebsiella pneumoniae 1084) |
4e-109 |
100 |
|
putative type IV secretory pathway VirB1 component |
NC_011745 (Escherichia coli ED1a) |
2e-108 |
99 |
|
putative type IV secretory pathway VirB1 component |
NC_011751 (Escherichia coli UMN026) |
2e-108 |
99 |
|
putative type IV secretory pathway VirB1 component |
NC_016845 (Klebsiella pneumoniae HS11286) |
2e-108 |
99 |
|
type IV secretory pathway VirB1 component |
NC_012731 (Klebsiella pneumoniae NTUH-K2044) |
4e-108 |
99 |
|
Lytic transglycosylase catalytic |
NC_013592 (Dickeya dadantii Ech586) |
5e-86 |
78 |
|
type IV secretory pathway VirB1 component |
NC_005814 (Yersinia pestis 91001) |
1e-73 |
63 |
|
hypothetical protein |
NC_009779 (Cronobacter sakazakii ATCC BAA-894) |
3e-72 |
63 |
|
hypothetical protein |
NC_013284 (Cronobacter turicensis z3032) |
1e-71 |
62 |
|
transglycosylase SLT domain-containing protein |
NC_011283 (Klebsiella pneumoniae 342) |
9e-58 |
58 |
|
transglycosylase |
NC_016818 (Rahnella aquatilis CIP 78.65) |
2e-57 |
59 |
|
transglycosylase |
NC_017047 (Rahnella aquatilis HX2) |
1e-56 |
58 |
|
Lytic transglycosylase catalytic |
NC_012912 (Dickeya zeae Ech1591) |
2e-56 |
64 |
|
X polypeptide |
NC_017845 (Pectobacterium sp. SCC3193) |
2e-56 |
56 |
|
VirB1 |
NC_014500 (Dickeya dadantii 3937) |
4e-56 |
71 |
|
transglycosylase SLT domain-containing protein |
NC_016612 (Klebsiella oxytoca KCTC 1686) |
5e-56 |
57 |
|
Lytic transglycosylase catalytic |
NC_013592 (Dickeya dadantii Ech586) |
6e-56 |
64 |
|
conjugal transfer protein |
NC_004547 (Pectobacterium atrosepticum SCRI1043) |
3e-53 |
54 |
|
type IV secretory pathway VirB1 component |
NC_011092 (Salmonella enterica CVM19633) |
7e-50 |
48 |
|
TriA protein |
NC_006154 (Yersinia pseudotuberculosis IP 32953) |
1e-48 |
49 |
|
putative Pilx1/VirB1 protein, putative conjugal transfer protein, putative exported protein |
NC_011739 (Escherichia coli UMN026) |
2e-47 |
57 |
|
Lytic Transglycosylase (LT) |
NC_017624 (Salmonella enterica B182) |
2e-47 |
57 |
|
transglycosylase |
NC_021842 (Salmonella enterica CFSAN002069) |
2e-47 |
57 |
|
pilx1 protein |
NC_011204 (Salmonella enterica CT_02021853) |
2e-47 |
57 |
|
putative conjugal transfer protein TriA |
NC_013718 (Citrobacter rodentium ICC168) |
2e-46 |
49 |
|
VirB1 |
NC_021841 (Salmonella enterica 41578) |
2e-46 |
49 |
|
pilx1 protein |
NC_010657 (Shigella boydii CDC 3083-94) |
2e-46 |
49 |
|
hypothetical protein |
NC_022078 (Klebsiella pneumoniae JM45) |
2e-42 |
48 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AY233333' AND ph.id_pai_orf='3' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc