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PAthogenisity Island DataBase (PAI DB)

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Homologs of trwN gene of AJ496288

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) trwN
( YP_001610466.1 )

TrwN protein

NC_010161
(Bartonella tribocorum CIP 105476)

2e-93

100

2) trwN
( YP_002972692.1 )

TrwN protein

NC_012846
(Bartonella grahamii as4aup)

1e-52

3) trwN
( YP_032774.1 )

trwN protein

NC_005955
(Bartonella quintana Toulouse)

6e-24

4) RM11_1147
( YP_006665560.1 )

trwN protein

NC_018533
(Bartonella quintana RM-11)

1e-21

• Sequence Alignments

1) trwN in NC_010161


> AJ496288|3|G3|32328572|CAD42834.1|Bartonella_tribocorum_IBS_506T|+|5100..5741|trwN|-|TrwN 
protein
Length=213

 Score =  334 bits (1253),  Expect = 2e-93, Method: Compositional matrix adjust.
 Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)

Query  1    MIFSDFTMFAAAYISNTPHLAFSALIEQGARDNVDITSNNDKLFGQLSPLREETAITEQL  60
            MIFSDFTMFAAAYISNTPHLAFSALIEQGARDNVDITSNNDKLFGQLSPLREETAITEQL
Sbjct  1    MIFSDFTMFAAAYISNTPHLAFSALIEQGARDNVDITSNNDKLFGQLSPLREETAITEQL  60

Query  61   KQNKHNFDAIFEQIDVENMKWFSFFGAFGFCRDLADVQSALACCYKQKVSKCVFEKAALQ  120
            KQNKHNFDAIFEQIDVENMKWFSFFGAFGFCRDLADVQSALACCYKQKVSKCVFEKAALQ
Sbjct  61   KQNKHNFDAIFEQIDVENMKWFSFFGAFGFCRDLADVQSALACCYKQKVSKCVFEKAALQ  120

Query  121  SALSFYNTKGLNSGADTQTITSYIGVKAAAQEDKNLQDPVRLKKEEPEQVTKVDSLPLSS  180
            SALSFYNTKGLNSGADTQTITSYIGVKAAAQEDKNLQDPVRLKKEEPEQVTKVDSLPLSS
Sbjct  121  SALSFYNTKGLNSGADTQTITSYIGVKAAAQEDKNLQDPVRLKKEEPEQVTKVDSLPLSS  180

Query  181  EELEDAFGHKESSSRDAFAAEGSSSSTEQLSGN  213
            EELEDAFGHKESSSRDAFAAEGSSSSTEQLSGN
Sbjct  181  EELEDAFGHKESSSRDAFAAEGSSSSTEQLSGN  213

2) trwN in NC_012846


> AJ496288|3|G3|32328572|CAD42834.1|Bartonella_tribocorum_IBS_506T|+|5100..5741|trwN|-|TrwN 
protein
Length=213

 Score =  198 bits (737),  Expect = 1e-52, Method: Compositional matrix adjust.
 Identities = 116/194 (60%), Positives = 153/194 (79%), Gaps = 1/194 (0%)

Query  1    MIVPDFTFFAAAYISNTPPITFSVIAEQEARDSIYVTDDKDNFFYQSSQLKETIATTEQF  60
            MI +DFT FAAAYISNTP ++FS + EQ ARD++ +T ++D++F Q S L+E  A TEQ+
Sbjct  1    MIFSDFTMFAAAYISNTPHLAFSALIEQGARDNVDITSNNDKLFGQLSPLREETAITEQL  60

Query  61   GQSKHNFNIILGQIGVGNVKLFSLFDAFGFCRNLTAVQSALTYCYEQTTSKCIFEKATLQ  120
             Q+KHNF+ I+ QI+V N+K FS+F+AFGFCR+L+ VQSAL+ CY Q  SKC+FEKA+LQ
Sbjct  61   KQNKHNFDAIFEQIDVENMKWFSFFGAFGFCRDLADVQSALACCYKQKVSKCVFEKAALQ  120

Query  121  SVLNFYNTEN-SNHTSIQKVTSYIGVKAVVQENEDLQEPVKLKKEEPEQTTNVDSLPLFS  179
            S L+FYNT   ++ +  Q +TSYIGVKA  QE+ +LQ+PV+LKKEEPEQ T+VDSLPL S
Sbjct  121  SALSFYNTKGLNSGADTQTITSYIGVKAAAQEDKNLQDPVRLKKEEPEQVTKVDSLPLSS  180

Query  180  KGEEDAFTHKESGT  193
               EDAF HKES++
Sbjct  181  EELEDAFGHKESSS  194

3) trwN in NC_005955


> AJ496288|3|G3|32328572|CAD42834.1|Bartonella_tribocorum_IBS_506T|+|5100..5741|trwN|-|TrwN 
protein
Length=213

 Score =  103 bits (374),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 70/164 (43%), Positives = 108/164 (66%), Gaps = 9/164 (5%)

Query  34   ATTEKFKQSGHNFGISLGQINVKNLKWFSMSCLISCVNLFDFCKNLKAVRIVLTHCYERA  93
            A TE++KQ+ HNF+  + QI+V N+KWFS          F+FC++L  V+  L+ CY + 
Sbjct  55   AITEQLKQNKHNFDAIFEQIDVENMKWFSF------FGAFGFCRDLADVQSALACCYKQK  108

Query  94   VSEYNSEQTTLQTALNFYNRGSFKSGLSSAYVQKIASHVAAEAPALLSEKPQQSVQFSTR  153
            VS    E+++LQ+AL+FYN  +++SG  +   Q I+S ++  A+A    + Q++V++   
Sbjct  109  VSKCVFEKAALQSALSFYNTKGLNSGADT---QTITSYIGVKAAAQEDKNLQDPVRLKKE  165

Query  154  KSEQTMKTEALPSSSEELEDAFTHKTSSVRDAFTTENSSLATED  197
             +EQ  K ++LP SSEELEDAF HK SS RDAF++E SS +TE+
Sbjct  166  EPEQVTKVDSLPLSSEELEDAFGHKESSSRDAFAAEGSSSSTEQ  209

4) RM11_1147 in NC_018533


> AJ496288|3|G3|32328572|CAD42834.1|Bartonella_tribocorum_IBS_506T|+|5100..5741|trwN|-|TrwN 
protein
Length=213

 Score = 96.0 bits (345),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 68/168 (41%), Positives = 109/168 (65%), Gaps = 10/168 (5%)

Query  31   EAVVKTEKFKQSGHNFGTSLGQINVKNLEWFCMSCFIGCVNFFDFCKNLKAVRIVLTHCY  90
            E    TE++KQ+ HNF++ + QI+V N+ WF    F+G    F+FC++L  V+  L+ CY
Sbjct  52   EETAITEQLKQNKHNFDAIFEQIDVENMKWFS---FFGA---FGFCRDLADVQSALACCY  105

Query  91   ERAMSEYNNSEQTPLQTALNFYNRGSFKSSLSNAYVQKIASHVAEKAPALLSEKLQQSVQ  150
             + +S     E+++LQ+AL+FYN  +++S+      Q I+S ++ KA+A    +LQ++V+
Sbjct  106  KQKVSKCV-FEKAALQSALSFYNTKGLNSGAD---TQTITSYIGVKAAAQEDKNLQDPVR  161

Query  151  FSTKESEQTMKTEALPSSFEELEDAFTHETSSVRDAFTTENSSLTTKD  198
            +   E+EQ  K ++LP S EELEDAF H  SS RDAF++E SS +T +
Sbjct  162  LKKEEPEQVTKVDSLPLSSEELEDAFGHKESSSRDAFAAEGSSSSTEQ  209