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Homologs of inlE gene of AJ012385

100

protein-level

Hit (GenBank Accn)

Product

Source Genome

Eval.

Ident.(%)

1) inlE
( NP_463795.1 )

internalin E

NC_003210
(Listeria monocytogenes EGD-e)

0.0

2) inlE
( YP_003412427.1 )

internalin E

NC_013766
(Listeria monocytogenes 08-5578)

0.0

3) inlE
( YP_003415516.1 )

internalin E

NC_013768
(Listeria monocytogenes 08-5923)

0.0

4) LMKG_01660
( YP_005967184.1 )

internalin E

NC_017546
(Listeria monocytogenes FSL R2-561)

0.0

5) inlE
( YP_006683592.1 )

internalin E

NC_018588
(Listeria monocytogenes SLCC2372)

0.0

6) inlE
( YP_006686527.1 )

internalin E

NC_018589
(Listeria monocytogenes SLCC2479)

0.0

7) LMOG_02565
( YP_005964240.1 )

internalin E

NC_017545
(Listeria monocytogenes J0161)

0.0

8) M642_14005
( YP_008273580.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

0.0

9) LMLG_0789
( YP_005970103.1 )

internalin E

NC_017547
(Listeria monocytogenes Finland 1988)

0.0

10) M639_01165
( YP_008294880.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

0.0

11) BN418_0297
( YP_007602484.1 )

Internalin-A

NC_020557
(Listeria monocytogenes La111)

0.0

12) BN419_0303
( YP_007605620.1 )

Internalin-A

NC_020558
(Listeria monocytogenes N53-1)

0.0

13) LMRG_02612
( YP_005961403.1 )

internalin E

NC_017544
(Listeria monocytogenes 10403S)

0.0

14) inlE
( YP_006695083.1 )

internalin E

NC_018592
(Listeria monocytogenes SLCC5850)

0.0

15) inlE
( YP_006697949.1 )

internalin E

NC_018593
(Listeria monocytogenes SLCC7179)

0.0

16) M640_00210
( YP_008300597.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

0.0

17) LM1816_09050
( YP_008286438.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

0.0

18) M644_14730
( YP_008285526.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

0.0

19) M645_00740
( YP_008303589.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

0.0

20) MUO_01505
( YP_006204532.1 )

internalin E

NC_017728
(Listeria monocytogenes 07PF0776)

0.0

21) inlE
( YP_002757006.1 )

internalin E

NC_012488
(Listeria monocytogenes Clip81459)

0.0

22) M637_03945
( YP_008274594.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

0.0

23) inlE
( YP_006753398.1 )

internalin E (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

0.0

24) M643_11660
( YP_008281837.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

0.0

25) M641_12475
( YP_008299994.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

0.0

26) inlE
( YP_006692223.1 )

internalin E

NC_018591
(Listeria monocytogenes SLCC2482)

0.0

27) inlE
( YP_006680718.1 )

internalin E

NC_018587
(Listeria monocytogenes SLCC2755)

0.0

28) inlE
( YP_006677819.1 )

internalin E

NC_018586
(Listeria monocytogenes SLCC2540)

0.0

29) inlE
( YP_012893.1 )

internalin E

NC_002973
(Listeria monocytogenes F2365)

0.0

30) M638_14040
( YP_008279417.1 )

internalin

NC_021825
(Listeria monocytogenes J2-1091)

0.0

31) inlA_3
( YP_007013851.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

0.0

32) inlE
( YP_006689433.1 )

internalin E

NC_018590
(Listeria monocytogenes SLCC2376)

0.0

33) inlE
( YP_006674953.1 )

internalin E

NC_018585
(Listeria monocytogenes SLCC2378)

0.0

34) inlE
( YP_006672081.1 )

internalin E

NC_018584
(Listeria monocytogenes ATCC 19117)

0.0

35) LM220_01607
( YP_008288464.1 )

internalin

NC_021830
(Listeria monocytogenes J1-220)

0.0

36) inlC2
( YP_006689431.1 )

internalin C2

NC_018590
(Listeria monocytogenes SLCC2376)

3e-132

37) M640_00200
( YP_008300595.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

4e-132

38) LM1816_09035
( YP_008286440.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

4e-132

39) M644_14740
( YP_008285528.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

4e-132

40) M645_00730
( YP_008303587.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

4e-132

41) MUO_01495
( YP_006204530.1 )

internalin H (LPXTG motif)

NC_017728
(Listeria monocytogenes 07PF0776)

4e-132

42) inlH
( YP_002757004.1 )

internalin H (LPXTG motif)

NC_012488
(Listeria monocytogenes Clip81459)

4e-132

43) inlC2
( YP_012891.1 )

internalin C2

NC_002973
(Listeria monocytogenes F2365)

4e-132

44) M638_14050
( YP_008279419.1 )

internalin

NC_021825
(Listeria monocytogenes J2-1091)

4e-132

45) inlC2
( YP_006753396.1 )

internalin C2 (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

4e-132

46) inlA
( YP_007013848.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

4e-132

47) inlC2
( YP_006674951.1 )

internalin C2

NC_018585
(Listeria monocytogenes SLCC2378)

4e-132

48) inlC2
( YP_006672078.1 )

internalin C2

NC_018584
(Listeria monocytogenes ATCC 19117)

1e-131

49) LM220_01592
( YP_008288462.1 )

internalin

NC_021830
(Listeria monocytogenes J1-220)

1e-131

50) M643_11650
( YP_008281835.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

8e-132

51) M641_12485
( YP_008299996.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

8e-132

52) inlC2
( YP_006692221.1 )

internalin C2

NC_018591
(Listeria monocytogenes SLCC2482)

8e-132

53) inlC2
( YP_006680716.1 )

internalin C2

NC_018587
(Listeria monocytogenes SLCC2755)

8e-132

54) LMOG_02567
( YP_005964238.1 )

internalin C2

NC_017545
(Listeria monocytogenes J0161)

9e-132

55) inlC2
( YP_006677817.1 )

internalin C2

NC_018586
(Listeria monocytogenes SLCC2540)

2e-131

56) M642_13995
( YP_008273578.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

4e-131

57) LMLG_0791
( YP_005970101.1 )

internalin C2

NC_017547
(Listeria monocytogenes Finland 1988)

4e-131

58) inlC2
( YP_006697947.1 )

internalin C2

NC_018593
(Listeria monocytogenes SLCC7179)

4e-131

59) inlC2
( YP_003412425.1 )

internalin H

NC_013766
(Listeria monocytogenes 08-5578)

2e-130

60) inlC2
( YP_003415514.1 )

internalin H

NC_013768
(Listeria monocytogenes 08-5923)

2e-130

61) LMRG_02646
( YP_005961401.1 )

internalin C2

NC_017544
(Listeria monocytogenes 10403S)

2e-130

62) M639_01175
( YP_008294882.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

2e-130

63) inlC2
( YP_006695081.1 )

internalin C2

NC_018592
(Listeria monocytogenes SLCC5850)

2e-130

64) M637_03935
( YP_008274592.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

3e-130

65) inlH
( NP_463794.1 )

internalin H

NC_003210
(Listeria monocytogenes EGD-e)

1e-129

66) LMKG_01661
( YP_005967183.1 )

internalin H protein

NC_017546
(Listeria monocytogenes FSL R2-561)

1e-129

67) inlH
( YP_006683591.1 )

internalin H

NC_018588
(Listeria monocytogenes SLCC2372)

1e-129

68) inlH
( YP_006686526.1 )

internalin H

NC_018589
(Listeria monocytogenes SLCC2479)

1e-129

69) inlD
( YP_006697948.1 )

internalin D

NC_018593
(Listeria monocytogenes SLCC7179)

4e-102

70) LMOG_02566
( YP_005964239.1 )

internalin D

NC_017545
(Listeria monocytogenes J0161)

1e-101

71) MUO_01500
( YP_006204531.1 )

internalin D

NC_017728
(Listeria monocytogenes 07PF0776)

3e-101

72) inlD
( YP_002757005.1 )

internalin D

NC_012488
(Listeria monocytogenes Clip81459)

3e-101

73) inlD
( YP_012892.1 )

internalin D

NC_002973
(Listeria monocytogenes F2365)

3e-101

74) LM220_17725
( YP_008288463.1 )

internalin

NC_021830
(Listeria monocytogenes J1-220)

3e-101

75) M637_03940
( YP_008274593.1 )

internalin

NC_021824
(Listeria monocytogenes J2-064)

3e-101

76) M638_14045
( YP_008279418.1 )

internalin

NC_021825
(Listeria monocytogenes J2-1091)

3e-101

77) inlD
( YP_006753397.1 )

internalin D (LPXTG motif)

NC_018642
(Listeria monocytogenes L312)

3e-101

78) inlA_2
( YP_007013849.1 )

Internalin-A

NC_019556
(Listeria monocytogenes LL195)

3e-101

79) inlD
( YP_006674952.1 )

internalin D

NC_018585
(Listeria monocytogenes SLCC2378)

3e-101

80) inlD
( YP_006677818.1 )

internalin D

NC_018586
(Listeria monocytogenes SLCC2540)

4e-101

81) LMRG_02851
( YP_005961402.1 )

internalin D

NC_017544
(Listeria monocytogenes 10403S)

5e-101

82) inlD
( YP_006695082.1 )

internalin D

NC_018592
(Listeria monocytogenes SLCC5850)

5e-101

83) inlD
( YP_003412426.1 )

internalin H

NC_013766
(Listeria monocytogenes 08-5578)

6e-101

84) inlD
( YP_003415515.1 )

internalin H

NC_013768
(Listeria monocytogenes 08-5923)

6e-101

85) M642_14000
( YP_008273579.1 )

internalin

NC_021823
(Listeria monocytogenes C1-387)

7e-101

86) LMLG_0790
( YP_005970102.1 )

internalin D

NC_017547
(Listeria monocytogenes Finland 1988)

7e-101

87) M639_01170
( YP_008294881.1 )

internalin

NC_021837
(Listeria monocytogenes J2-031)

7e-101

88) M643_11655
( YP_008281836.1 )

internalin

NC_021826
(Listeria monocytogenes N1-011A)

3e-100

89) M641_12480
( YP_008299995.1 )

internalin

NC_021838
(Listeria monocytogenes R2-502)

3e-100

90) inlD
( YP_006692222.1 )

internalin D

NC_018591
(Listeria monocytogenes SLCC2482)

3e-100

91) inlD
( YP_006680717.1 )

internalin D

NC_018587
(Listeria monocytogenes SLCC2755)

3e-100

92) inlD
( YP_006689432.1 )

internalin D

NC_018590
(Listeria monocytogenes SLCC2376)

1e-99

93) M640_00205
( YP_008300596.1 )

internalin

NC_021839
(Listeria monocytogenes J1776)

6e-94

94) LM1816_16585
( YP_008286439.1 )

internalin

NC_021829
(Listeria monocytogenes J1816)

6e-94

95) M644_14735
( YP_008285527.1 )

internalin

NC_021827
(Listeria monocytogenes J1817)

6e-94

96) M645_00735
( YP_008303588.1 )

internalin

NC_021840
(Listeria monocytogenes J1926)

6e-94

97) LMOSLCC2376_0237
( YP_006689435.1 )

hypothetical protein

NC_018590
(Listeria monocytogenes SLCC2376)

2e-82

98) lin0290
( NP_469635.1 )

internalin-like protein

NC_003212
(Listeria innocua Clip11262)

5e-82

99) LMOSLCC2540_2112
( YP_006679655.1 )

hypothetical protein

NC_018586
(Listeria monocytogenes SLCC2540)

2e-77

100) lse_2606
( YP_003465839.1 )

hypothetical protein

NC_013891
(Listeria seeligeri SLCC3954)

2e-74

• Sequence Alignments

1) inlE in NC_003210


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  771 bits (2917),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 495/499 (99%), Positives = 496/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480
            NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

2) inlE in NC_013768


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  769 bits (2910),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/499 (99%), Positives = 495/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

3) LMKG_01660 in NC_017546


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  769 bits (2910),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/499 (99%), Positives = 495/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

4) inlE in NC_018588


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  769 bits (2910),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/499 (99%), Positives = 495/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

5) inlE in NC_018589


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  769 bits (2910),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/499 (99%), Positives = 495/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

6) inlE in NC_013766


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  769 bits (2910),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/499 (99%), Positives = 495/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

7) LMOG_02565 in NC_017545


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  768 bits (2905),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 494/499 (99%), Positives = 495/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELELSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TEL LSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480
            NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

8) LMLG_0789 in NC_017547


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  767 bits (2902),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/499 (99%), Positives = 494/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSINVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSS NVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

9) BN418_0297 in NC_020557


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  767 bits (2902),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/499 (99%), Positives = 494/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSINVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSS NVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

10) BN419_0303 in NC_020558


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  767 bits (2902),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/499 (99%), Positives = 494/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSINVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSS NVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

11) M642_14005 in NC_021823


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  767 bits (2902),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/499 (99%), Positives = 494/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSINVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSS NVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

12) M639_01165 in NC_021837


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  767 bits (2902),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 493/499 (99%), Positives = 494/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSINVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSS NVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

13) LMRG_02612 in NC_017544


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  766 bits (2897),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 492/499 (99%), Positives = 493/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPL NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSINVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSS NVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

14) inlE in NC_018592


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  766 bits (2897),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 492/499 (99%), Positives = 493/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPL NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSINVQENGTNEGINNLNSSGEDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSS NVQENGTNEGINNLNSSGEDKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

15) inlE in NC_018593


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  743 bits (2813),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 490/499 (99%), Positives = 492/499 (99%), Gaps = 0/499 (0%)

Query  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEIFTDPVLTDNVKTLLG  60
            MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPIN  FTDPVLTDNVKTLLG
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120
            KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180
            TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240
            AGLSNLQFLSFGSTQVSDLTPLANLSKLT+LNAMNSKVSDVSPLTGLSNLTEVYLEENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300
            SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360
            PNLTWDLNSFINSVSYTFNQSVTFKNTT PFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420
            NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDNNSDNAEPNASSSINVQengtnegtnnpnssGDDKVNIKLPITGDELNVLPIFV  480
            NVEPNDNNSDNAEPNASSS NVQENGTNEG NN NSSG+DKVNIKLPITGD LNVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGIGLVLFRKKRQTK  499
            GAVLIGIGLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

16) LM1816_09050 in NC_021829


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 459/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVEAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEV+AAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+L TM+LIYTDITDVTPL GL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQI  240
            A+L+NLQ LS+G TQVSDLTP+ANLSKLT LNA NSKVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGAYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNG+YTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSIAFKNTTVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQS++FKNTTVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSGDDKINIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSSG+DK+NIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

17) M640_00210 in NC_021839


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 459/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVEAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEV+AAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+L TM+LIYTDITDVTPL GL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQI  240
            A+L+NLQ LS+G TQVSDLTP+ANLSKLT LNA NSKVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGAYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNG+YTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSIAFKNTTVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQS++FKNTTVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSGDDKINIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSSG+DK+NIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

18) M644_14730 in NC_021827


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 459/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVEAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEV+AAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+L TM+LIYTDITDVTPL GL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQI  240
            A+L+NLQ LS+G TQVSDLTP+ANLSKLT LNA NSKVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGAYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNG+YTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSIAFKNTTVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQS++FKNTTVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSGDDKINIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSSG+DK+NIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

19) M645_00740 in NC_021840


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  660 bits (2495),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 459/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVEAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEV+AAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+L TM+LIYTDITDVTPL GL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQI  240
            A+L+NLQ LS+G TQVSDLTP+ANLSKLT LNA NSKVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGAYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNG+YTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSIAFKNTTVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQS++FKNTTVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSGDDKINIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSSG+DK+NIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

20) MUO_01505 in NC_017728


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/499 (83%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

21) inlE in NC_012488


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/499 (83%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

22) inlE in NC_018642


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/499 (83%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

23) inlE in NC_018587


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/499 (83%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

24) inlE in NC_018591


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/499 (83%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

25) M637_03945 in NC_021824


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/499 (83%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

26) M643_11660 in NC_021826


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/499 (83%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

27) M641_12475 in NC_021838


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2485),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 410/499 (83%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

28) inlE in NC_018586


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  657 bits (2482),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 458/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQDKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQ+K IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

29) inlE in NC_002973


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  656 bits (2481),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 457/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSITVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS   EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

30) inlA_3 in NC_019556


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  656 bits (2481),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 457/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSITVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS   EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

31) inlE in NC_018590


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  656 bits (2481),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 406/499 (82%), Positives = 459/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSAIAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSA+AGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALTNLQTLSLGYTQVSDLTPLANLSKLTILNAENSKVSDISPLASLSSLAEVYLRENQI  240
            A+L+NLQ LS+G TQVSDLTPLANLSKLT LNA NSKVSD+SPL++LS+L+EVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGAYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNG+YTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLMWDLNSYINSVSYTFNQSIAFKNTTVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+L WDLNS+INSVSYTFNQS++FKNTTVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASNITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPAS+ITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSGDDKINIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSSG+DK+NIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

32) inlE in NC_018585


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  656 bits (2481),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 457/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSITVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS   EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

33) M638_14040 in NC_021825


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  656 bits (2481),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 457/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSITVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS   EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFRKKRQTK  499
            GAVLIG+GLVLFRKKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

34) inlE in NC_018584


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  654 bits (2474),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 457/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFSKKRQTK  499
            GAVLIG+GLVLF KKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

35) LM220_01607 in NC_021830


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  654 bits (2474),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 409/499 (82%), Positives = 457/499 (92%), Gaps = 0/499 (0%)

Query  1    MKRNKVILRIVVTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLE  60
            MKRNK  LRI+VTLA VLAITFWVGMSSKEVQAAVIE+PTPIN  FTDPV++DNVKTLL 
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKI  120
            KADVTDEVTQTDLDS+T+LSAKSAGITTIEG+QYLTNLSELEL DNQ+TD++PL+NLTKI
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKI  120

Query  121  TELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPL  180
            TEL LSGNPLKDVSALAGLK+LK ++LIYTDITDVT+LAGL+NLQ LNLDINQITDI+PL
Sbjct  121  TELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPL  180

Query  181  AALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQI  240
            A+LSNLQ LS+G TQVSDLTP+ANLSKLT LNA N KVSD+SPL++LS+LTEVYL ENQI
Sbjct  181  AGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQI  240

Query  241  SDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYTS  300
            SDVSPLA++PNLSI+ LT+Q ITNQPV+YQNK IVPNV+ GLSGELIAPDTISDNGTYTS
Sbjct  241  SDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTS  300

Query  301  PDLTWDLNSYINSVSYTFNQSVVFKNATVPFSGTVTQPLTEAYTAVFDVDGEQTSLTVVV  360
            P+LTWDLNS+INSVSYTFNQSV FKN+TVPFSGTVTQPLTE Y+ VFDVDGEQTS  V V
Sbjct  301  PNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGV  360

Query  361  NELIEEPTVPTKEGYTFDGWYDAETNGNKWDFAVDKMPASDITLYAKFTENEEPNASSSI  420
            NELI+EPT P+KEGY FDGWYDA T+GNKWDF++DKMPASDITLYAKFTENEEPNASS+I
Sbjct  361  NELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFTENEEPNASSPI  420

Query  421  NVEPNDDNSINVEPDASNSITVKPTENNDGTNNPNSSSDDKVNIKLPITGDEWNVLPIFV  480
            NVEPND+NS N EP+AS+S  V+    N+G NN NSS++DKVNIKLPITGD  NVLPIFV
Sbjct  421  NVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNIKLPITGDKLNVLPIFV  480

Query  481  GAVLIGMGLVLFSKKRQTK  499
            GAVLIG+GLVLF KKRQTK
Sbjct  481  GAVLIGIGLVLFRKKRQTK  499

36) inlC2 in NC_018590


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  465 bits (1751),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 288/410 (71%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITNLTPLKNLTK  121
            GK++VTD VTQ+DLD++  LSA ++G+TTIEG+QYL NL  LEL DNQ+T+L PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITDISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+TQVSDLTPLANLSKLT L A ++K+SD+SPL+GL+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSMTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPAAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EP+AP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 95.4 bits (343),  Expect = 6e-21, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKITTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFVGVFLLGTATLILRKSIKVK  548
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

37) LM1816_09035 in NC_021829


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 288/410 (71%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++  LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITDISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+TQVSDLTPLANLSKLT L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSMTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.1 bits (338),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNTT--------------------  514
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  515  ---LPTAGDENTMLPIFIGVFLLGTATLILRKSIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

38) M640_00200 in NC_021839


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 288/410 (71%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++  LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITDISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+TQVSDLTPLANLSKLT L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSMTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.1 bits (338),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNTT--------------------  514
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  515  ---LPTAGDENTMLPIFIGVFLLGTATLILRKSIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

39) M644_14740 in NC_021827


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 288/410 (71%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++  LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITDISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+TQVSDLTPLANLSKLT L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSMTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.1 bits (338),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNTT--------------------  514
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  515  ---LPTAGDENTMLPIFIGVFLLGTATLILRKSIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

40) M645_00730 in NC_021840


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 288/410 (71%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++  LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITDISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+TQVSDLTPLANLSKLT L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSMTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.1 bits (338),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNTT--------------------  514
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  515  ---LPTAGDENTMLPIFIGVFLLGTATLILRKSIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

41) MUO_01495 in NC_017728


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGSSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.7 bits (340),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

42) inlH in NC_012488


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGSSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.7 bits (340),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

43) inlC2 in NC_018642


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGSSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.7 bits (340),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

44) inlC2 in NC_002973


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGSSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.7 bits (340),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

45) inlA in NC_019556


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGSSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.7 bits (340),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

46) inlC2 in NC_018585


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGSSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.7 bits (340),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

47) M638_14050 in NC_021825


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  464 bits (1750),  Expect = 4e-132, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGSSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.7 bits (340),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

48) inlC2 in NC_018584


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  463 bits (1743),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 284/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDLNQITDLSP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDV+PLAGLSNLQVL LD+NQITD++P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.4 bits (339),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNTT--------------------  514
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  515  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

49) LM220_01592 in NC_021830


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  463 bits (1743),  Expect = 1e-131, Method: Compositional matrix adjust.
 Identities = 284/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDLNQITDLSP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDV+PLAGLSNLQVL LD+NQITD++P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.4 bits (339),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNTT--------------------  514
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  515  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

50) inlC2 in NC_018587


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  463 bits (1746),  Expect = 8e-132, Method: Compositional matrix adjust.
 Identities = 284/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDV+PLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.1 bits (338),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 61/157 (39%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFSKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+F+ N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

51) inlC2 in NC_018591


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  463 bits (1746),  Expect = 8e-132, Method: Compositional matrix adjust.
 Identities = 284/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDV+PLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.1 bits (338),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 61/157 (39%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFSKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+F+ N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

52) M643_11650 in NC_021826


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  463 bits (1746),  Expect = 8e-132, Method: Compositional matrix adjust.
 Identities = 284/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDV+PLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.1 bits (338),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 61/157 (39%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFSKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+F+ N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

53) M641_12485 in NC_021838


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  463 bits (1746),  Expect = 8e-132, Method: Compositional matrix adjust.
 Identities = 284/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDV+PLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.1 bits (338),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 61/157 (39%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFSKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+F+ N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

54) LMOG_02567 in NC_017545


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  463 bits (1745),  Expect = 9e-132, Method: Compositional matrix adjust.
 Identities = 286/410 (70%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGIQYLNNLISLELKDNQITNLTPLKNLTK  121
            GK++VTD VTQ+DLD++  LSA ++G+TTIEG+QYL NL  LEL DNQ+T+L PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITDISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDNKISDISPLAGLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+TQVSDLTPLANLSKLT L A ++K+SD+SPL+GL+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ITDISPLANISNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            I+D+SPLA+++NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSMTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 95.2 bits (342),  Expect = 8e-21, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKITTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNTT--------------------  514
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  515  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

55) inlC2 in NC_018586


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  462 bits (1742),  Expect = 2e-131, Method: Compositional matrix adjust.
 Identities = 284/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDPALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F DP L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDLNQITDLSP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDV+PLAGLSNLQVL LD+NQITD++P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 93.9 bits (337),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTAKFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNTT--------------------  514
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  515  ---LPTTGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP TGD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

56) LMLG_0791 in NC_017547


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  461 bits (1737),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVLKIVLMVTAILSISLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ L+I++ ++ +L+I++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGIYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPNVV G SG  IAP TISDNG Y+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKIGGNKWDFGVDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAK +GNKWDFG+DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.4 bits (339),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKGWYDAKTGGNKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+GNKWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

57) inlC2 in NC_018593


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  461 bits (1737),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 286/410 (70%), Positives = 353/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVLKIVLMVTAILSISLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ L+I++ ++ +L+I++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 95.4 bits (343),  Expect = 7e-21, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGNKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP AP+K+GY F GWYDAKT+GNKWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

58) M642_13995 in NC_021823


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  461 bits (1737),  Expect = 4e-131, Method: Compositional matrix adjust.
 Identities = 285/410 (70%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVLKIVLMVTAILSISLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ L+I++ ++ +L+I++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGIYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPNVV G SG  IAP TISDNG Y+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKIGGNKWDFGVDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAK +GNKWDFG+DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.4 bits (339),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKGWYDAKTGGNKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+GNKWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

59) inlC2 in NC_013768


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  459 bits (1728),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 354/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGFSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNIVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPN+V G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFGVDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDFG+DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 93.6 bits (336),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

60) LMRG_02646 in NC_017544


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  459 bits (1730),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 354/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNIVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPN+V G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFGVDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDFG+DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 93.6 bits (336),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

61) inlC2 in NC_018592


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  459 bits (1730),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 354/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNIVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPN+V G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFGVDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDFG+DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 93.6 bits (336),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

62) M639_01175 in NC_021837


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  459 bits (1730),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 354/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNIVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPN+V G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFGVDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDFG+DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 93.6 bits (336),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

63) inlC2 in NC_013766


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  459 bits (1728),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 354/410 (87%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGFSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNIVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPN+V G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFGVDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDFG+DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 93.6 bits (336),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTASFDNDGKLTTQKVTYQSLLEEPAAPTKTGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSNSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

64) M637_03935 in NC_021824


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  458 bits (1727),  Expect = 3e-130, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPINVIFPDLALANAVKTAT  61
             KR ++ +++++ +A +L+I++ V  S + EV+A  I +PTPIN  F D  L++ VKT  
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDAVTQADLDGIATLSAFNTGVTTIEGIQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD+++ LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVAPLAGLSNLQVLYLDLNQITDLSP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDV+PLAGLSNLQVL LD+NQITD++P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNLIEVHLKDNQ  241
            LAGL+NLQ+LS+G+ QV+DLTPLANLSKLT+L A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+L+NL IVTLTNQTITNQPV+YQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSV+FKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGNKWDFSTDKMPAENITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+GNKWDF+ DKMPA +ITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.4 bits (339),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 94/157 (60%), Gaps = 23/157 (14%)

Query  415  YTATFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFKGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD DG  T+  V  + L++EP+AP+K GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndspnpndptpntptgngdgtsnpSDSGGNT---------------------  513
            TLYA+FT N+ PN++ P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

65) inlH in NC_003210


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  456 bits (1719),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+G KWDF+ DKMPA DITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNT---------------------  513
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

66) LMKG_01661 in NC_017546


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  456 bits (1719),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+G KWDF+ DKMPA DITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNT---------------------  513
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

67) inlH in NC_018588


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  456 bits (1719),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+G KWDF+ DKMPA DITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNT---------------------  513
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

68) inlH in NC_018589


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  456 bits (1719),  Expect = 1e-129, Method: Compositional matrix adjust.
 Identities = 283/410 (70%), Positives = 352/410 (86%), Gaps = 1/410 (0%)

Query  2    KKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPALANAIKIAA  61
             KR ++ +++++ ++ +L++++ V  S + EV+A  I +PT+IN  F DP L++ +K   
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTK  121
            GK++VTD VTQ+DLD++T LSA ++G+TTIEG+QYL NL  LEL DNQ+TDL PL NLTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  122  ITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP  181
            ITEL LSGNPLK+VSA+AGL+++KT+DL  T+ITDVTPLAGLSNLQVL LD+NQIT+I+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  182  LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQ  241
            LAGL+NLQ+LS+G++QVSDLTPLANLSKLT+L+A ++K+SD+SPL++L+NL EV L +NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  242  ISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPATISDNGTYA  301
            ISDVSPLA+ +NL IVTLTNQTITNQPVFYQN+ +VPNVV G SG  IAP TISDNGTY+
Sbjct  240  ISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYT  299

Query  302  SPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSVTVG  361
            SPNLTW+L SFIN+VSYTFNQSVTFKNTTVPFSGTVTQPLTE Y+ VFDVDG QTS  VG
Sbjct  300  SPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYAVVFDVDGEQTSAMVG  359

Query  362  ANELIKEPTAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFT  411
             NELI+EPTAP+KEGY F GWYDAKT+G KWDF+ DKMPA DITLYA+FT
Sbjct  360  VNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score =  101 bits (366),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  415  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  474
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  475  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNT---------------------  513
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  514  --TLPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  548
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

69) inlD in NC_018593


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  365 bits (1370),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 218/434 (51%), Positives = 321/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGKSSKEVQAAEIGQPTPINEIFTDENLANAIKITLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +K  L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPNTTSDVSQTELDSISEVTAESSNIASLEGVQYlnnldtlvlnnnKITTLNPLAGLTKL  120
            K++ T +V+QT+LDS+++++A S+ I+++EG+QY                      LT+L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  SILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            S LE  +NQ++D+++L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGNKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+GNKWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  102 bits (369),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTSKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

70) LMOG_02566 in NC_017545


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  363 bits (1365),  Expect = 1e-101, Method: Compositional matrix adjust.
 Identities = 218/434 (51%), Positives = 320/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGKSSKEVQAAEIGQPTPINEIFTDENLANAIKITLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +K  L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPNTTSDVSQTELDSISEVTAESSNIASLEGTQYlnnldtlvlnnnKITTLNPLAGLTKL  120
            K++ T +V+QT+LDS+++++A S+ I+++EG QY                      LT+L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  SILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            S LE  +NQ++D+++L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGNKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+GNKWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

71) MUO_01500 in NC_017728


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

72) inlD in NC_012488


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

73) LM220_17725 in NC_021830


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

74) inlD in NC_018642


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

75) inlD in NC_002973


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

76) inlA_2 in NC_019556


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

77) inlD in NC_018585


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

78) M637_03940 in NC_021824


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

79) M638_14045 in NC_021825


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 3e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

80) inlD in NC_018586


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  362 bits (1359),  Expect = 4e-101, Method: Compositional matrix adjust.
 Identities = 215/435 (50%), Positives = 325/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTALRILVTLAVV+AI+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSndpttvtptgngngtstpsnsggnAT--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

81) LMRG_02851 in NC_017544


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  361 bits (1357),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 218/434 (51%), Positives = 318/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEVQAAEIGQPTPINEIFTDENLANAIKTTLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +KT L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLTKL  120
            K+  +  V+Q +LDSV +++A S+ I+++EG+QY                      LT+L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  SILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            S LE  +NQ++D+++L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGNKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+GNKWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

82) inlD in NC_018592


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  361 bits (1357),  Expect = 5e-101, Method: Compositional matrix adjust.
 Identities = 218/434 (51%), Positives = 318/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEVQAAEIGQPTPINEIFTDENLANAIKTTLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +KT L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLTKL  120
            K+  +  V+Q +LDSV +++A S+ I+++EG+QY                      LT+L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  SILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            S LE  +NQ++D+++L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGNKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+GNKWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

83) inlD in NC_013768


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  361 bits (1356),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 217/434 (50%), Positives = 318/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEVQAAEIGQPTPINEIFTDENLANAIKTTLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +KT L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLSKL  120
            K+  +  V+Q +LDSV +++A S+ I+++EG+QY                      L++L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  NILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            + LE  +NQ++D+N+L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGNKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+GNKWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

84) inlD in NC_013766


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  361 bits (1356),  Expect = 6e-101, Method: Compositional matrix adjust.
 Identities = 217/434 (50%), Positives = 318/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEVQAAEIGQPTPINEIFTDENLANAIKTTLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +KT L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLSKL  120
            K+  +  V+Q +LDSV +++A S+ I+++EG+QY                      L++L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  NILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            + LE  +NQ++D+N+L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGNKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+GNKWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

85) LMLG_0790 in NC_017547


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  361 bits (1355),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 217/434 (50%), Positives = 317/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEVQAAEIGQPTPINEIFTDENLANAIKTTLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +KT L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLTKL  120
            K+  +  V+Q +LDSV +++A S+ I+++EG+QY                      LT+L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  NILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            + LE  +NQ++D+N+L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGTKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+G KWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

86) M642_14000 in NC_021823


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  361 bits (1355),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 217/434 (50%), Positives = 317/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEVQAAEIGQPTPINEIFTDENLANAIKTTLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +KT L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLTKL  120
            K+  +  V+Q +LDSV +++A S+ I+++EG+QY                      LT+L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  NILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            + LE  +NQ++D+N+L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGTKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+G KWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

87) M639_01170 in NC_021837


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  361 bits (1355),  Expect = 7e-101, Method: Compositional matrix adjust.
 Identities = 217/434 (50%), Positives = 317/434 (74%), Gaps = 29/434 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEVQAAEIGQPTPINEIFTDENLANAIKTTLS  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKEVQAA I +PTPIN  FTD  L++ +KT L+
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINGNFTDPVLTDNVKTLLG  60

Query  61   KPSTASAVSQVELDSVRDVTAESSNIASLEGVQYlnnldtlvlnnnKITDLNPLAGLTKL  120
            K+  +  V+Q +LDSV +++A S+ I+++EG+QY                      LT+L
Sbjct  61   KADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTNL  98

Query  121  NILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPV  180
            + LE  +NQ++D+N+L+N+T++ +LRL GN +K++++++ L NL T++L   +IT ++P+
Sbjct  99   SELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPL  158

Query  181  SGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQI  240
            +GL NL  L +D N+I+D++P++GLS+L+ L+ +S Q+SDL PL+NL+ +  +    +++
Sbjct  159  AGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKV  218

Query  241  SDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELVV  300
            SDV+P++ L+NL  V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +V
Sbjct  219  SDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPIV  275

Query  301  PNNIKDEMGALIAPATISDNGVYASPNINWNLPNYTNQVSYTFNKQLAY----GSFSGTV  356
            PN + +  G LIAP TISDNG Y+SPN+ W+L ++ N VSYTFN+ +++     +FSGTV
Sbjct  276  PNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTV  335

Query  357  TQPLHNAYTATFDVDGVKTNEAVEETKLLQEPIAPTKEGYTFTGWYDAKTGGTKWDFATD  416
            TQPL + Y+  FDVDG +T+  V    L++EP AP+KEGY F GWYDAKT+G KWDF+ D
Sbjct  336  TQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGID  395

Query  417  KMPAEDITLYAQFT  430
            KMPA DITLYA+FT
Sbjct  396  KMPASDITLYAKFT  409


 Score =  101 bits (365),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 62/157 (40%), Positives = 95/157 (61%), Gaps = 23/157 (14%)

Query  434  YTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNI  493
            Y+  FD+DG  T+  V  + L++EP AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  494  TLYAQFTKndnpnpddpttntptgngdgtSNPSNSGGNTT--------------------  533
            TLYA+FT N++PN+  P    P +N  + ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  534  ---LPTAGDENTMLPIFIGVFLLGTATLILRKTIKVK  567
               LP +GD   +LPIF+G  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

88) inlD in NC_018587


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 213/435 (49%), Positives = 324/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALHILVTLAVVMVISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTAL+ILVTLAVV+ I+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

89) inlD in NC_018591


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 213/435 (49%), Positives = 324/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALHILVTLAVVMVISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTAL+ILVTLAVV+ I+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

90) M643_11655 in NC_021826


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 213/435 (49%), Positives = 324/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALHILVTLAVVMVISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTAL+ILVTLAVV+ I+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

91) M641_12480 in NC_021838


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  359 bits (1347),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 213/435 (49%), Positives = 324/435 (75%), Gaps = 30/435 (6%)

Query  1    MKRKKTALHILVTLAVVMVISFWVGTSSKEEVQAAVIDQPTPINEIFTDENLANAIKATL  60
            MKR+KTAL+ILVTLAVV+ I+FWVG SSKE VQAAVI++PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QY                      L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            L  LE  DNQ++D+++L+N+T + +LRL+GN +K++++++ L NL T++L   +ITD++P
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDKNQ  240
            ++GL NL  L +D N+I+D++P+AGL++L  L+ ++ Q+SDL+P+++L+ +  +   +++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            +SDV+P++ L+NL+ V+L ENQISD+S+L  L   PN+  +TL NQ IT++PV+YQ+  +
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKL---PNLSIVTLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNIKWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN+ W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =   99 bits (360),  Expect = 3e-22, Method: Compositional matrix adjust.
 Identities = 64/157 (41%), Positives = 96/157 (62%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFIGWYDAKTGGTKWDFATDKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ DKMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G + +++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

92) inlD in NC_018590


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  357 bits (1340),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 217/435 (50%), Positives = 317/435 (73%), Gaps = 30/435 (6%)

Query  1    MKRNKKALRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKATL  60
            MKRNK ALRILVTLAVV+AI+FWVG SSKE VQAAVI +PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQAELDSISEVTAESSNIASLEGAQYLNNIDTLVLNNNKITTLNPLAGLSR  120
             K+  T +V+Q++LDS+++++A S+ I+++EG QYL N+  L L +N++T LNPL+ L++
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  121  LSILELSNNQLNDISALSNVTNLHQLRLDGNQIKQLNGVSNLNNLETIELSNNQITDISP  180
            ++ L LS N L+D+SAL+ + NL  + L   +I ++  ++ L+NL+ ++L  NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  181  ISGLKNLIGLGIDNNKISDLSPISGLSKLNHLTADNNQISDLSPISSLGAMEIMRLDGNQ  240
            ++GL NL  L++++ ++SDL+P++ LSKL  L A N+++SD+SP+++L+ +  + L+ NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  241  ISDVTPIANLANLSYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            ISDV+P+A+L+NLS V                         TL NQ IT++PV+YQ+  +
Sbjct  240  ISDVSPLAKLPNLSIV-------------------------TLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN++W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VTQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGIKWDFAT  416
            VTQPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+G KWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score = 99.1 bits (357),  Expect = 5e-22, Method: Compositional matrix adjust.
 Identities = 62/152 (41%), Positives = 94/152 (62%), Gaps = 23/152 (15%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtstpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ + P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTATLILRK  563
               LP +GD   +LPIFVG  L+G + +++RK
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRK  494

93) LM1816_16585 in NC_021829


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  338 bits (1268),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 217/435 (50%), Positives = 315/435 (73%), Gaps = 30/435 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKATL  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKE VQAAVI +PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+QT+LDS+ +++A S+ I+++EG QYL N+  L L +N++TDLN+L+ L+K
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            +  L  ++N L D+SALA + +L  + L   +I ++  ++ L NL+ ++L  NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDGNQ  240
            ++GL NL  L+++  ++SDL+P+A L+KL+ L A N+++SD+SP+++L+ +  + L+ NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  241  ISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            ISDV+P+A+L+NL+ V                         TL NQ IT++PV+YQ+  +
Sbjct  240  ISDVSPLAKLPNLSIV-------------------------TLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN++W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            V QPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =  102 bits (368),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 98/157 (63%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtsnpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTAMLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G +++++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

94) M640_00205 in NC_021839


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  338 bits (1268),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 217/435 (50%), Positives = 315/435 (73%), Gaps = 30/435 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKATL  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKE VQAAVI +PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+QT+LDS+ +++A S+ I+++EG QYL N+  L L +N++TDLN+L+ L+K
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            +  L  ++N L D+SALA + +L  + L   +I ++  ++ L NL+ ++L  NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDGNQ  240
            ++GL NL  L+++  ++SDL+P+A L+KL+ L A N+++SD+SP+++L+ +  + L+ NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  241  ISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            ISDV+P+A+L+NL+ V                         TL NQ IT++PV+YQ+  +
Sbjct  240  ISDVSPLAKLPNLSIV-------------------------TLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN++W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            V QPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =  102 bits (368),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 98/157 (63%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtsnpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTAMLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G +++++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

95) M644_14735 in NC_021827


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  338 bits (1268),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 217/435 (50%), Positives = 315/435 (73%), Gaps = 30/435 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKATL  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKE VQAAVI +PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+QT+LDS+ +++A S+ I+++EG QYL N+  L L +N++TDLN+L+ L+K
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            +  L  ++N L D+SALA + +L  + L   +I ++  ++ L NL+ ++L  NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDGNQ  240
            ++GL NL  L+++  ++SDL+P+A L+KL+ L A N+++SD+SP+++L+ +  + L+ NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  241  ISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            ISDV+P+A+L+NL+ V                         TL NQ IT++PV+YQ+  +
Sbjct  240  ISDVSPLAKLPNLSIV-------------------------TLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN++W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            V QPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =  102 bits (368),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 98/157 (63%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtsnpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTAMLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G +++++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

96) M645_00735 in NC_021840


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  338 bits (1268),  Expect = 6e-94, Method: Compositional matrix adjust.
 Identities = 217/435 (50%), Positives = 315/435 (73%), Gaps = 30/435 (6%)

Query  1    MKRNKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPINEIFTDENLANAIKATL  60
            MKRNKTALRILVTLAVV+AI+FWVG SSKE VQAAVI +PTPIN  FTD  L++ +K+ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSKE-VQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   NKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYlnnidtlilnnnkiTDLNSLAGLSK  120
             K+  T +V+QT+LDS+ +++A S+ I+++EG QYL N+  L L +N++TDLN+L+ L+K
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  121  LRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIELSNNQITDISP  180
            +  L  ++N L D+SALA + +L  + L   +I ++  ++ L NL+ ++L  NQITDI+P
Sbjct  120  ITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITP  179

Query  181  VSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISSLGAMEIMRLDGNQ  240
            ++GL NL  L+++  ++SDL+P+A L+KL+ L A N+++SD+SP+++L+ +  + L+ NQ
Sbjct  180  LAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQ  239

Query  241  ISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQELV  300
            ISDV+P+A+L+NL+ V                         TL NQ IT++PV+YQ+  +
Sbjct  240  ISDVSPLAKLPNLSIV-------------------------TLTNQTITNQPVFYQNKPI  274

Query  301  VPNNIKDEMGALISPDTISDNGVYASPNISWNLANYTNQVSYTFNKQL----AQGSFSGT  356
            VPN + +  G LI+PDTISDNG Y+SPN++W+L ++ N VSYTFN+ +    +  +FSGT
Sbjct  275  VPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGT  334

Query  357  VIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFAT  416
            V QPL + Y+  FDVDG +T+ +V    L++EPTAP+KEGY F GWYDAKT+GNKWDF+ 
Sbjct  335  VTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  417  DKMPAEDITLYAQFT  431
            DKMPA DITLYA+FT
Sbjct  395  DKMPASDITLYAKFT  409


 Score =  102 bits (368),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 63/157 (41%), Positives = 98/157 (63%), Gaps = 23/157 (14%)

Query  435  YTATFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNI  494
            Y+  FD+DG  T+  V  + L++EP+AP+K+GY F GWYDAKT+G KWDF+ +KMPA++I
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  495  TLYAQFTKNATPDSNDpttvtptgngngtsnpsnsggntt--------------------  534
            TLYA+FT N  P+++ P  V P +N ++ ++P+ S++N                      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  535  ---LPTAGDENTMLPIFVGVFLLGTAMLILRKTIKVK  568
               LP +GD   +LPIFVG  L+G +++++RK  + K
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQTK  499

97) LMOSLCC2376_0237 in NC_018590


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  299 bits (1121),  Expect = 2e-82, Method: Compositional matrix adjust.
 Identities = 211/520 (41%), Positives = 362/520 (70%), Gaps = 38/520 (7%)

Query  1    MNIKTLLVRVGVTLTMALGFSLWLGTSPGIGAQAASLAQPTPINEVFPDPQMALTMEEKL  60
            M+ +   +R+ VTL++ L++++W+G S+    QAA + +PTPIN  F DP ++  +   L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSK-EVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   GKTTVTDLVSQSELDSLTELKSNLL-IASIEGIQYLTNLTELNISNAEVSDISALKDLTK  119
            GK+ VTD V+Q++LDS+T+L ++   I++IEG+QYLTNL+EL++ + +V+D+++L +LTK
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  120  LTKLEMYQNNISDINVlenltnltdldlhdnQITDISPVRNLTNLVELNLAYNQISDIGA  179
            +T L +                       +N + D+S++  L NL  ++L Y +I+D+ +
Sbjct  120  ITELRL----------------------SGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  180  VSTLSKLNKLWFTDNQVSDISAVAGlnnlsslslGYNQISDISILTNLTNLDGLGIDNNQ  239
            ++ LS+L+ L +  NQ++DI+++AGL+NL  LS+G  Q+SD++ L+NL++L +L   N++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  240  VSDLTPIANLTNLTYVGLHNNQISDLTPIANLTNLTRMYLSNQQITNNPIPFHSniaipn  299
            VSD++P++ L+NLT V L++NQISD++P+A+L NL+ + L+NQ ITN+P+ ++++  +PN
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPN  277

Query  300  niknnknDVIAPLVISNEGTYDNSNVIWNLADYVNKVSYTFSQQVTIGSATETFNGTVTQ  359
             +     ++IAP  IS++GTY ++N+ W+L  ++N VSYTF+Q VT+ ++T  F+GTVTQ
Sbjct  278  VVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQ  337

Query  360  PL-ELYTVTFDVDGVTTNETLEADtlltkptpptkEGYTFAGWYDAKTNGTKWNFETDKM  418
            PL E+Y+V FDVDG  T+  +  + L+  PT+P+KEGY F GWYDAKT+G KW+F  DKM
Sbjct  338  PLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKM  397

Query  419  PAKDITLYAQFSEDK----------SPAEDDTDKGIPNVPA---INDGDVVHSLGSSEPP  465
            PA DITLYA+F+E+            P ++++D++ PN ++   +++ +  +++ + +++
Sbjct  398  PASDITLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSS  457

Query  466  AEENVNISLPKTGDSQNPLVIFMGLFLLGTGIISLHKIRN  505
            +E++VNI LP TGD  N L IF+G  L+G G++ ++K R+
Sbjct  458  GEDKVNIKLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQ  497

98) lin0290 in NC_003212


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  298 bits (1116),  Expect = 5e-82, Method: Compositional matrix adjust.
 Identities = 207/513 (41%), Positives = 355/513 (70%), Gaps = 38/513 (7%)

Query  8    VRVGVILTMALGISLWLGTSPGIDAQAASLAQPTPINEVFPDTQMALTMANKLGKTKVTD  67
            +R+ V L++ L+I++W+G S+  + QAA + +PTPIN  F D  ++  +   LGK+ VTD
Sbjct  8    LRILVTLAVVLAITFWVGMSSK-EVQAAVIEHPTPINGNFTDPVLTDNVKTLLGKADVTD  66

Query  68   LVSQSELDSLTELRSNLP-IASIEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMY  126
             V+Q++LDS+T+L ++ + I++IEG+QYLTNL+EL++ + +V+D+++L +LTK+T L + 
Sbjct  67   EVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLS  126

Query  127  QNNISDINVLENLTNITDLDLHDNQITDISPvrnltnlvvlnlSYNQISDISAVSTLSKL  186
             N + D++ L  L N+  +DL                       Y +I+D+++++ LS+L
Sbjct  127  GNPLKDVSALAGLKNLKTMDL----------------------IYTDITDVTPLAGLSNL  164

Query  187  NDLGFTDNQVSDISAVAGlnnlsslslGYNQISDISILTNLTNLDGLSIDHNQISDLTPI  246
            + L +  NQ++DI+++AGL+NL  LS+G  Q+SD++ L+NL++L +L+  ++++SD++P+
Sbjct  165  QVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSKVSDVSPL  224

Query  247  ANLTNLTFVGLHNNQISDLTPIANLTNLTRMYLSGQQITNNPIPYHSNIAIPNNVKNNKN  306
            + L+NLT V L++NQISD++P+A+L NL+ + L+ Q ITN+P+ Y+++  +PN V     
Sbjct  225  TGLSNLTEVYLEENQISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSG  284

Query  307  DVIAPLVISNEGTYDNSNVVWNLADYVNKVSYTFSQQVTIGSATETFNGTVTQPL-ELYT  365
            ++IAP  IS++GTY ++N+ W+L  ++N VSYTF+Q VT+ ++T  F+GTVTQPL E+Y+
Sbjct  285  ELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQPLTEVYA  344

Query  366  VTFDVDGVttnetleadtllteptpptKEGYTFTGWYDAKTNGTKWDFETDKMPAKDITL  425
            V FDVDG  T+  +  + L+ EPT+P+KEGY F GWYDAKT+G KWDF  DKMPA DITL
Sbjct  345  VVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITL  404

Query  426  YAQFSEdkgpaddd-------------tdkdtpndpaINDGDAVHSLDSSEPPAEVNVNI  472
            YA+F+E+  P                 ++ ++++   +++ ++ +++++ ++++E +VNI
Sbjct  405  YAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKVNI  464

Query  473  SLPKTGDSQNPLVIFMGLFLLGTGIISLHKIRN  505
             LP TGD  N L IF+G  L+G G++ ++K R+
Sbjct  465  KLPITGDKLNVLPIFVGAVLIGIGLVLFRKKRQ  497

99) LMOSLCC2540_2112 in NC_018586


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  283 bits (1060),  Expect = 2e-77, Method: Compositional matrix adjust.
 Identities = 175/434 (41%), Positives = 295/434 (68%), Gaps = 26/434 (5%)

Query  1    MNDKKHFKHLLIALATIIGISFWIETSGDIEAKAASLTQATPINQIFPDPEMAKFMQSQL  60
            M+ +K   ++L++LA +++I+FW+  S+  E +AA + ++TPIN  F DP ++  +++ L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMSSK-EVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  61   SKTTVTDPVSQDELNRVSYIIVGDAGIESIEGVQYLNNLTIIMMTQNNISDISPVSELKN  120
            +K+ VTD V+Q +L+ V+ +    AGI +IEG+QYL NL+ + + +N+++D++P+++L +
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTK  119

Query  121  LQTLYFNDNKISNIsglssltslvslsIDGNQISDIsplsslsnlysltmssNKISDLSA  180
            +  L                       + GN + D+S+L++L NL ++ +    I+D+++
Sbjct  120  ITEL----------------------RLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  181  LSGLTNLVSLSMDDNQISDISPLSSLTNLHELLANNNQISDVSDLSRLINLTMLQLNNNQ  240
            L+GL+NL  L++D NQI+DI+PL++L+NL+ L   + Q+SD++ L+ L +LT L+  N++
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNAMNSK  217

Query  241  ITNVSPLSDLVKLTWLLIDDNQISDLSALKDLTWLMTVSMENQQVNNKAVDYQTELTISN  300
            +++VSPL++L +LT + +++NQISD+S+L  L  L  V++ NQ + N++V YQ    ++N
Sbjct  218  VSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPN  277

Query  301  IVKDNTGGLVLPATMSDNGSYSSPDITWNLPEYKTKVSYTFNQQVRFGGATGTFSGTVNQ  360
            +V + +G L+ P T+SDNG+Y+SP++TW+L  +   VSYTFNQ V F  +T  FSGTV Q
Sbjct  278  VVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTVPFSGTVTQ  337

Query  361  PLKKAILEYEAIFDVDGVETSEVVEQDSLLSEPPTPTKEGYTFTGWYDAPKEGSKWDFET  420
            PL      Y  +FDVDG +TS +V  + L++EP +P+KEGY F GWYDA  +G+KWDF  
Sbjct  338  PLTEV---YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGI  394

Query  421  DKMPKNNIKLYAQF  434
            DKMP ++I LYA+F
Sbjct  395  DKMPASDITLYAKF  408


 Score = 99.6 bits (359),  Expect = 4e-22, Method: Compositional matrix adjust.
 Identities = 60/155 (39%), Positives = 96/155 (62%), Gaps = 12/155 (7%)

Query  439  YIVTLDIDGKITSQTVDYQNHVQTPTEPTKEGYVFMGWYDKRTGGSEWDFETDKMPANDM  498
            Y V +D+DG  TS  V+ ++ ++ PT P+KEGY+F GWYD +T+G+ WDF  DKMPA+D+
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  499  TLYAQFTGVIKPIGP----IEPASPTIPGVDTEYHSGLDVSEKAEKSATVKIPTD-----  549
            TLYA+FT    P ++    +EP        + +  S+ +V E++ + +  ++ +      
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGEDKV  462

Query  550  --KLPKTGDKNNTLPIFLGILCLGLAAFLGFRWRQ  582
              KLP TGDK N LPIF+G + +G++  L FR ++
Sbjct  463  NIKLPITGDKLNVLPIFVGAVLIGIGLVL-FRKKR  496

100) lse_2606 in NC_013891


> AJ012385|3|G3|12054796|CAC20636.1|Listeria_monocytogenes_EGD|+|3948..5447|inlE|-|internalin 
E
Length=499

 Score =  273 bits (1021),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 197/457 (44%), Positives = 306/457 (67%), Gaps = 48/457 (10%)

Query  2    IKKRHSFFSFLAALLIVGSINLWVGTSHEMVVQADSIDQPTPINQIFPDSALAEVMRYQL  61
            +K+  + + +L +L +V +I +WVG S    VQA  I++PTPIN  F D+ L++ ++  L
Sbjct  1    MKRNKTALRILVTLAVVLAITFWVGMS-SKEVQAAVIEHPTPINGNFTDPVLTDNVKTLL  59

Query  62   GKSSVTDVVSQSELDNVTSVNGQKKEIISIEGVQYltnltnlllAENNIRDIQPLENLTN  121
            GK+ VTD V+Q++LD+VT ++++   I +IEG+QY                      LTN
Sbjct  60   GKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQY----------------------LTN  97

Query  122  LTVLNMIDNELTDISPlsnltnltklslGDDSIIDVSPLAGLTNLINLYLTSYDLTDVSE  181
            L+ L++IDN++TD++PL+NLT++T L L+++++ DVS+LAGL NL  + L   D+TDV+ 
Sbjct  98   LSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTP  157

Query  182  LAnltnltnlWLSSPKLSNVSVLSNFHNLETLQLRSTLVSDITPIANLKKLKLLDVSMNE  241
            LA L+NL  L L   ++++++ L+ + NL+ L + ST VSD+TP+ANL KL  L+     
Sbjct  158  LAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTALNA----  213

Query  242  IKDIsslselsnlteltltDNHISDISALSELTNLNYLYLDVNQISDISALADLSNLEEL  301
                               ++ +SD+S+L+ L+NL  +YL+ NQISD+S+LA L+NL  +
Sbjct  214  ------------------MNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSIV  255

Query  302  YVMDQTITNEPLTFQTNIVINNTIKDENGALVTPLDISDNGSYTSPNITWNLPAYTDEVN  361
             + +QTITN+P+ +Q + ++ N + + +G L++P  ISDNG+YTSPN+TW+L ++ + V+
Sbjct  256  TLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPDTISDNGTYTSPNLTWDLNSFINSVS  315

Query  362  YTFEKIGSIGNGPFYFTGTVYQPLEEVPATYNVIFDIDGVQNSEEVVVDALLEEPAAPTK  421
            YTF++  ++ N    F+GTV QPL EV   Y V+FD+DG Q S  V V+ L++EP+AP+K
Sbjct  316  YTFNQSVTFKNTTVPFSGTVTQPLTEV---YAVVFDVDGEQTSAMVGVNELINEPTAPAK  372

Query  422  EGYTFTGWYDAKTGGEKWDFTTDKMPAKDITLYAQFS  458
            EGY F GWYDAKT+G+KWDF  DKMPA DITLYA+F+
Sbjct  373  EGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT  409


 Score = 94.9 bits (341),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 51/118 (44%), Positives = 74/118 (63%), Gaps = 6/118 (5%)

Query  462  YKAIFDVDGTTTSQTVNYQSLLTKPTDPTKEGYTFTGWYDAKTGGNKWDFTTDKMPANDI  521
            Y  +FDVDG  TS  V  + L+  PT P+KEGY F GWYDAKT+GNKWDF  DKMPA+DI
Sbjct  343  YAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDI  402

Query  522  TLYAQFSKNPENGGTD------TPSNGNKTKPEQPARENSTTITAIEKSTTLPKTGDN  573
            TLYA+F+ N E  ++         +N++++ P+ ++ +N     + E    L  +G++
Sbjct  403  TLYAKFTENEEPNASSPINVEPNDNNSDNAEPNASSSNNVQENGTNEGINNLNSSGED  460