Hit (GenBank Accn) |
Product |
Source Genome |
Eval. |
Ident.(%) |
|
T3SS structure protein EscF |
NC_013364 (Escherichia coli 11128) |
5e-28 |
100 |
|
T3SS structure protein EscF |
NC_013361 (Escherichia coli 11368) |
5e-28 |
100 |
|
T3SS structure protein EscF |
NC_013353 (Escherichia coli 12009) |
5e-28 |
100 |
|
type III secretion apparatus needle protein |
NC_013941 (Escherichia coli CB9615) |
5e-28 |
100 |
|
T3SS structure protein EscF |
NC_011601 (Escherichia coli E2348/69) |
5e-28 |
100 |
|
type III secretion apparatus needle protein |
NC_011353 (Escherichia coli EC4115) |
5e-28 |
100 |
|
hypothetical protein |
NC_002655 (Escherichia coli EDL933) |
5e-28 |
100 |
|
type III secretion apparatus needle protein |
NC_017656 (Escherichia coli RM12579) |
5e-28 |
100 |
|
protein EscF |
NC_002695 (Escherichia coli Sakai) |
5e-28 |
100 |
|
LEE-encoded type III secretion system component |
NC_013008 (Escherichia coli TW14359) |
5e-28 |
100 |
|
protein EscF |
NC_017906 (Escherichia coli Xuzhou21) |
5e-28 |
100 |
|
T3SS structural protein EscF |
NC_013716 (Citrobacter rodentium ICC168) |
5e-22 |
61 |
|
type III secretion system needle protein |
NC_017571 (Shewanella baltica BA175) |
3e-10 |
41 |
|
type III secretion system needle protein |
NC_017579 (Shewanella baltica OS117) |
3e-10 |
41 |
|
type III secretion system needle protein |
NC_009052 (Shewanella baltica OS155) |
3e-10 |
41 |
SELECT distinct ph.genome_accn, ph.id_genome_orf, ph.position_begin_pai, ph.position_end_pai, ph.position_begin_genome, ph.position_end_genome, ph.identity, ph.qcoverage, ph.tcoverage,
ph.evalue, ph.score, ph.multi_hsp, ph.multi_strand, ph.source_class, hsp, go.name, go.name_alt, go.pid
FROM pai_homolog as ph, genome_orf as go
WHERE ph.pai_accn='AF461393' AND ph.id_pai_orf='3' AND match_level='P'
AND go.genome_accn=ph.genome_accn AND ph.id_genome_orf=go.id_genome_orf
ORDER BY ph.score desc, ph.evalue asc, ph.identity desc